I: pbuilder: network access will be disabled during build
I: Current time: Thu Feb 20 15:51:35 +14 2025
I: pbuilder-time-stamp: 1740016295
I: Building the build Environment
I: extracting base tarball [/var/cache/pbuilder/bullseye-reproducible-base.tgz]
I: copying local configuration
W: --override-config is not set; not updating apt.conf Read the manpage for details.
I: mounting /proc filesystem
I: mounting /sys filesystem
I: creating /{dev,run}/shm
I: mounting /dev/pts filesystem
I: redirecting /dev/ptmx to /dev/pts/ptmx
I: policy-rc.d already exists
I: using eatmydata during job
I: Copying source file
I: copying [ball_1.5.0+git20180813.37fc53c-6.dsc]
I: copying [./ball_1.5.0+git20180813.37fc53c.orig.tar.xz]
I: copying [./ball_1.5.0+git20180813.37fc53c-6.debian.tar.xz]
I: Extracting source
gpgv: unknown type of key resource 'trustedkeys.kbx'
gpgv: keyblock resource '/tmp/dpkg-verify-sig.iR4Gj_6Z/trustedkeys.kbx': General error
gpgv: Signature made Mon Mar  9 11:51:34 2020 
gpgv:                using RSA key F1F007320A035541F0A663CA578A0494D1C646D1
gpgv:                issuer "tille@debian.org"
gpgv: Can't check signature: No public key
dpkg-source: warning: failed to verify signature on ./ball_1.5.0+git20180813.37fc53c-6.dsc
dpkg-source: info: extracting ball in ball-1.5.0+git20180813.37fc53c
dpkg-source: info: unpacking ball_1.5.0+git20180813.37fc53c.orig.tar.xz
dpkg-source: info: unpacking ball_1.5.0+git20180813.37fc53c-6.debian.tar.xz
dpkg-source: info: using patch list from debian/patches/series
dpkg-source: info: applying python3.patch
dpkg-source: info: applying fix-ftbfs-char.patch
dpkg-source: info: applying missing_GLEW
I: using fakeroot in build.
I: Installing the build-deps
I: user script /srv/workspace/pbuilder/40411/tmp/hooks/D01_modify_environment starting
debug: Running on ionos6-i386.
I: Changing host+domainname to test build reproducibility
I: Adding a custom variable just for the fun of it...
I: Changing /bin/sh to bash
'/bin/sh' -> '/bin/bash'
lrwxrwxrwx 1 root root 9 Feb 20 01:51 /bin/sh -> /bin/bash
I: Setting pbuilder2's login shell to /bin/bash
I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other
I: user script /srv/workspace/pbuilder/40411/tmp/hooks/D01_modify_environment finished
I: user script /srv/workspace/pbuilder/40411/tmp/hooks/D02_print_environment starting
I: set
  BASH=/bin/sh
  BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:hostcomplete:interactive_comments:progcomp:promptvars:sourcepath
  BASH_ALIASES=()
  BASH_ARGC=()
  BASH_ARGV=()
  BASH_CMDS=()
  BASH_LINENO=([0]="12" [1]="0")
  BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment")
  BASH_VERSINFO=([0]="5" [1]="1" [2]="4" [3]="1" [4]="release" [5]="i686-pc-linux-gnu")
  BASH_VERSION='5.1.4(1)-release'
  BUILDDIR=/build/reproducible-path
  BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other'
  BUILDUSERNAME=pbuilder2
  BUILD_ARCH=i386
  DEBIAN_FRONTEND=noninteractive
  DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all,-fixfilepath parallel=15 '
  DIRSTACK=()
  DISTRIBUTION=bullseye
  EUID=0
  FUNCNAME=([0]="Echo" [1]="main")
  GROUPS=()
  HOME=/root
  HOSTNAME=i-capture-the-hostname
  HOSTTYPE=i686
  HOST_ARCH=i386
  IFS=' 	
  '
  INVOCATION_ID=d9bbb18d0c734c57bbd44b0dd371f37d
  LANG=C
  LANGUAGE=de_CH:de
  LC_ALL=C
  LD_LIBRARY_PATH=/usr/lib/libeatmydata
  LD_PRELOAD=libeatmydata.so
  MACHTYPE=i686-pc-linux-gnu
  MAIL=/var/mail/root
  OPTERR=1
  OPTIND=1
  OSTYPE=linux-gnu
  PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path
  PBCURRENTCOMMANDLINEOPERATION=build
  PBUILDER_OPERATION=build
  PBUILDER_PKGDATADIR=/usr/share/pbuilder
  PBUILDER_PKGLIBDIR=/usr/lib/pbuilder
  PBUILDER_SYSCONFDIR=/etc
  PIPESTATUS=([0]="0")
  POSIXLY_CORRECT=y
  PPID=40411
  PS4='+ '
  PWD=/
  SHELL=/bin/bash
  SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix
  SHLVL=3
  SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.1Y5hDCOn/pbuilderrc_3JNU --distribution bullseye --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bullseye-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.1Y5hDCOn/b2 --logfile b2/build.log ball_1.5.0+git20180813.37fc53c-6.dsc'
  SUDO_GID=112
  SUDO_UID=107
  SUDO_USER=jenkins
  TERM=unknown
  TZ=/usr/share/zoneinfo/Etc/GMT-14
  UID=0
  USER=root
  _='I: set'
  http_proxy=http://85.184.249.68:3128
I: uname -a
  Linux i-capture-the-hostname 6.1.0-17-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.69-1 (2023-12-30) x86_64 GNU/Linux
I: ls -l /bin
  total 5776
  -rwxr-xr-x 1 root root 1367848 Mar 27  2022 bash
  -rwxr-xr-x 3 root root   38280 Jul 20  2020 bunzip2
  -rwxr-xr-x 3 root root   38280 Jul 20  2020 bzcat
  lrwxrwxrwx 1 root root       6 Jul 20  2020 bzcmp -> bzdiff
  -rwxr-xr-x 1 root root    2225 Jul 20  2020 bzdiff
  lrwxrwxrwx 1 root root       6 Jul 20  2020 bzegrep -> bzgrep
  -rwxr-xr-x 1 root root    4877 Sep  4  2019 bzexe
  lrwxrwxrwx 1 root root       6 Jul 20  2020 bzfgrep -> bzgrep
  -rwxr-xr-x 1 root root    3775 Jul 20  2020 bzgrep
  -rwxr-xr-x 3 root root   38280 Jul 20  2020 bzip2
  -rwxr-xr-x 1 root root   17768 Jul 20  2020 bzip2recover
  lrwxrwxrwx 1 root root       6 Jul 20  2020 bzless -> bzmore
  -rwxr-xr-x 1 root root    1297 Jul 20  2020 bzmore
  -rwxr-xr-x 1 root root   38824 Sep 22  2020 cat
  -rwxr-xr-x 1 root root   71624 Sep 22  2020 chgrp
  -rwxr-xr-x 1 root root   67528 Sep 22  2020 chmod
  -rwxr-xr-x 1 root root   75752 Sep 22  2020 chown
  -rwxr-xr-x 1 root root  157960 Sep 22  2020 cp
  -rwxr-xr-x 1 root root  128724 Dec 10  2020 dash
  -rwxr-xr-x 1 root root  124904 Sep 22  2020 date
  -rwxr-xr-x 1 root root   92172 Sep 22  2020 dd
  -rwxr-xr-x 1 root root  100752 Sep 22  2020 df
  -rwxr-xr-x 1 root root  153964 Sep 22  2020 dir
  -rwxr-xr-x 1 root root   83644 Jan 20  2022 dmesg
  lrwxrwxrwx 1 root root       8 Nov  7  2019 dnsdomainname -> hostname
  lrwxrwxrwx 1 root root       8 Nov  7  2019 domainname -> hostname
  -rwxr-xr-x 1 root root   34664 Sep 22  2020 echo
  -rwxr-xr-x 1 root root      28 Jan 25  2023 egrep
  -rwxr-xr-x 1 root root   34664 Sep 22  2020 false
  -rwxr-xr-x 1 root root      28 Jan 25  2023 fgrep
  -rwxr-xr-x 1 root root   71928 Jan 20  2022 findmnt
  -rwsr-xr-x 1 root root   30112 Feb 26  2021 fusermount
  -rwxr-xr-x 1 root root  210488 Jan 25  2023 grep
  -rwxr-xr-x 2 root root    2346 Apr 10  2022 gunzip
  -rwxr-xr-x 1 root root    6447 Apr 10  2022 gzexe
  -rwxr-xr-x 1 root root  100952 Apr 10  2022 gzip
  -rwxr-xr-x 1 root root   21916 Nov  7  2019 hostname
  -rwxr-xr-x 1 root root   83980 Sep 22  2020 ln
  -rwxr-xr-x 1 root root   55572 Feb  7  2020 login
  -rwxr-xr-x 1 root root  153964 Sep 22  2020 ls
  -rwxr-xr-x 1 root root  153124 Jan 20  2022 lsblk
  -rwxr-xr-x 1 root root   96328 Sep 22  2020 mkdir
  -rwxr-xr-x 1 root root   79912 Sep 22  2020 mknod
  -rwxr-xr-x 1 root root   47048 Sep 22  2020 mktemp
  -rwxr-xr-x 1 root root   58920 Jan 20  2022 more
  -rwsr-xr-x 1 root root   50720 Jan 20  2022 mount
  -rwxr-xr-x 1 root root   13856 Jan 20  2022 mountpoint
  -rwxr-xr-x 1 root root  157996 Sep 22  2020 mv
  lrwxrwxrwx 1 root root       8 Nov  7  2019 nisdomainname -> hostname
  lrwxrwxrwx 1 root root      14 Dec 16  2021 pidof -> /sbin/killall5
  -rwxr-xr-x 1 root root   38824 Sep 22  2020 pwd
  lrwxrwxrwx 1 root root       4 Mar 27  2022 rbash -> bash
  -rwxr-xr-x 1 root root   46984 Sep 22  2020 readlink
  -rwxr-xr-x 1 root root   75720 Sep 22  2020 rm
  -rwxr-xr-x 1 root root   46984 Sep 22  2020 rmdir
  -rwxr-xr-x 1 root root   22292 Sep 27  2020 run-parts
  -rwxr-xr-x 1 root root  125036 Dec 22  2018 sed
  lrwxrwxrwx 1 root root       9 Feb 20 01:51 sh -> /bin/bash
  -rwxr-xr-x 1 root root   34696 Sep 22  2020 sleep
  -rwxr-xr-x 1 root root   83880 Sep 22  2020 stty
  -rwsr-xr-x 1 root root   79396 Jan 20  2022 su
  -rwxr-xr-x 1 root root   34696 Sep 22  2020 sync
  -rwxr-xr-x 1 root root  602584 Feb 17  2021 tar
  -rwxr-xr-x 1 root root   13860 Sep 27  2020 tempfile
  -rwxr-xr-x 1 root root  108520 Sep 22  2020 touch
  -rwxr-xr-x 1 root root   34664 Sep 22  2020 true
  -rwxr-xr-x 1 root root   17768 Feb 26  2021 ulockmgr_server
  -rwsr-xr-x 1 root root   30236 Jan 20  2022 umount
  -rwxr-xr-x 1 root root   34664 Sep 22  2020 uname
  -rwxr-xr-x 2 root root    2346 Apr 10  2022 uncompress
  -rwxr-xr-x 1 root root  153964 Sep 22  2020 vdir
  -rwxr-xr-x 1 root root   63024 Jan 20  2022 wdctl
  lrwxrwxrwx 1 root root       8 Nov  7  2019 ypdomainname -> hostname
  -rwxr-xr-x 1 root root    1984 Apr 10  2022 zcat
  -rwxr-xr-x 1 root root    1678 Apr 10  2022 zcmp
  -rwxr-xr-x 1 root root    5898 Apr 10  2022 zdiff
  -rwxr-xr-x 1 root root      29 Apr 10  2022 zegrep
  -rwxr-xr-x 1 root root      29 Apr 10  2022 zfgrep
  -rwxr-xr-x 1 root root    2081 Apr 10  2022 zforce
  -rwxr-xr-x 1 root root    8049 Apr 10  2022 zgrep
  -rwxr-xr-x 1 root root    2206 Apr 10  2022 zless
  -rwxr-xr-x 1 root root    1842 Apr 10  2022 zmore
  -rwxr-xr-x 1 root root    4577 Apr 10  2022 znew
I: user script /srv/workspace/pbuilder/40411/tmp/hooks/D02_print_environment finished
 -> Attempting to satisfy build-dependencies
 -> Creating pbuilder-satisfydepends-dummy package
Package: pbuilder-satisfydepends-dummy
Version: 0.invalid.0
Architecture: i386
Maintainer: Debian Pbuilder Team <pbuilder-maint@lists.alioth.debian.org>
Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder
 This package was created automatically by pbuilder to satisfy the
 build-dependencies of the package being currently built.
Depends: debhelper-compat (= 12), dh-python, qtbase5-dev, qttools5-dev, libqt5opengl5-dev, python3-sip-dev, flex, bison, cmake, qtwebengine5-dev, libfftw3-dev, libeigen3-dev, libgsl0-dev, python3-dev, libxrender-dev, libboost-dev, libboost-iostreams-dev, libboost-thread-dev, libboost-math-dev, libboost-system-dev, libasio-dev, libboost-regex-dev, libxmu-dev, libglew-dev, libx11-dev, tidy, chrpath, doxygen, graphviz, ghostscript, texlive-latex-base, texlive-latex-recommended, texlive-fonts-recommended, texlive-latex-extra
dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'.
Selecting previously unselected package pbuilder-satisfydepends-dummy.
(Reading database ... 17763 files and directories currently installed.)
Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ...
Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ...
dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested:
 pbuilder-satisfydepends-dummy depends on debhelper-compat (= 12); however:
  Package debhelper-compat is not installed.
 pbuilder-satisfydepends-dummy depends on dh-python; however:
  Package dh-python is not installed.
 pbuilder-satisfydepends-dummy depends on qtbase5-dev; however:
  Package qtbase5-dev is not installed.
 pbuilder-satisfydepends-dummy depends on qttools5-dev; however:
  Package qttools5-dev is not installed.
 pbuilder-satisfydepends-dummy depends on libqt5opengl5-dev; however:
  Package libqt5opengl5-dev is not installed.
 pbuilder-satisfydepends-dummy depends on python3-sip-dev; however:
  Package python3-sip-dev is not installed.
 pbuilder-satisfydepends-dummy depends on flex; however:
  Package flex is not installed.
 pbuilder-satisfydepends-dummy depends on bison; however:
  Package bison is not installed.
 pbuilder-satisfydepends-dummy depends on cmake; however:
  Package cmake is not installed.
 pbuilder-satisfydepends-dummy depends on qtwebengine5-dev; however:
  Package qtwebengine5-dev is not installed.
 pbuilder-satisfydepends-dummy depends on libfftw3-dev; however:
  Package libfftw3-dev is not installed.
 pbuilder-satisfydepends-dummy depends on libeigen3-dev; however:
  Package libeigen3-dev is not installed.
 pbuilder-satisfydepends-dummy depends on libgsl0-dev; however:
  Package libgsl0-dev is not installed.
 pbuilder-satisfydepends-dummy depends on python3-dev; however:
  Package python3-dev is not installed.
 pbuilder-satisfydepends-dummy depends on libxrender-dev; however:
  Package libxrender-dev is not installed.
 pbuilder-satisfydepends-dummy depends on libboost-dev; however:
  Package libboost-dev is not installed.
 pbuilder-satisfydepends-dummy depends on libboost-iostreams-dev; however:
  Package libboost-iostreams-dev is not installed.
 pbuilder-satisfydepends-dummy depends on libboost-thread-dev; however:
  Package libboost-thread-dev is not installed.
 pbuilder-satisfydepends-dummy depends on libboost-math-dev; however:
  Package libboost-math-dev is not installed.
 pbuilder-satisfydepends-dummy depends on libboost-system-dev; however:
  Package libboost-system-dev is not installed.
 pbuilder-satisfydepends-dummy depends on libasio-dev; however:
  Package libasio-dev is not installed.
 pbuilder-satisfydepends-dummy depends on libboost-regex-dev; however:
  Package libboost-regex-dev is not installed.
 pbuilder-satisfydepends-dummy depends on libxmu-dev; however:
  Package libxmu-dev is not installed.
 pbuilder-satisfydepends-dummy depends on libglew-dev; however:
  Package libglew-dev is not installed.
 pbuilder-satisfydepends-dummy depends on libx11-dev; however:
  Package libx11-dev is not installed.
 pbuilder-satisfydepends-dummy depends on tidy; however:
  Package tidy is not installed.
 pbuilder-satisfydepends-dummy depends on chrpath; however:
  Package chrpath is not installed.
 pbuilder-satisfydepends-dummy depends on doxygen; however:
  Package doxygen is not installed.
 pbuilder-satisfydepends-dummy depends on graphviz; however:
  Package graphviz is not installed.
 pbuilder-satisfydepends-dummy depends on ghostscript; however:
  Package ghostscript is not installed.
 pbuilder-satisfydepends-dummy depends on texlive-latex-base; however:
  Package texlive-latex-base is not installed.
 pbuilder-satisfydepends-dummy depends on texlive-latex-recommended; however:
  Package texlive-latex-recommended is not installed.
 pbuilder-satisfydepends-dummy depends on texlive-fonts-recommended; however:
  Package texlive-fonts-recommended is not installed.
 pbuilder-satisfydepends-dummy depends on texlive-latex-extra; however:
  Package texlive-latex-extra is not installed.

Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ...
Reading package lists...
Building dependency tree...
Reading state information...
Initializing package states...
Writing extended state information...
Building tag database...
pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0)
pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0)
The following NEW packages will be installed:
  autoconf{a} automake{a} autopoint{a} autotools-dev{a} bison{a} bsdextrautils{a} chrpath{a} cmake{a} cmake-data{a} debhelper{a} dh-autoreconf{a} dh-python{a} dh-strip-nondeterminism{a} doxygen{a} dwz{a} file{a} flex{a} fontconfig{a} fontconfig-config{a} fonts-dejavu-core{a} fonts-lmodern{a} fonts-urw-base35{a} gettext{a} gettext-base{a} ghostscript{a} graphviz{a} groff-base{a} icu-devtools{a} intltool-debian{a} iso-codes{a} libaom0{a} libapache-pom-java{a} libarchive-zip-perl{a} libarchive13{a} libasio-dev{a} libasound2{a} libasound2-data{a} libavahi-client3{a} libavahi-common-data{a} libavahi-common3{a} libavcodec58{a} libavformat58{a} libavutil56{a} libbluray2{a} libboost-atomic1.74-dev{a} libboost-atomic1.74.0{a} libboost-chrono1.74-dev{a} libboost-chrono1.74.0{a} libboost-date-time1.74-dev{a} libboost-date-time1.74.0{a} libboost-dev{a} libboost-iostreams-dev{a} libboost-iostreams1.74-dev{a} libboost-math-dev{a} libboost-math1.74-dev{a} libboost-math1.74.0{a} libboost-regex-dev{a} libboost-regex1.74-dev{a} libboost-regex1.74.0{a} libboost-serialization1.74-dev{a} libboost-serialization1.74.0{a} libboost-system-dev{a} libboost-system1.74-dev{a} libboost-system1.74.0{a} libboost-thread-dev{a} libboost-thread1.74-dev{a} libboost-thread1.74.0{a} libboost1.74-dev{a} libbrotli1{a} libbsd0{a} libcairo-gobject2{a} libcairo2{a} libcap2{a} libcap2-bin{a} libcdt5{a} libcgraph6{a} libchromaprint1{a} libclang-cpp11{a} libclang1-11{a} libcodec2-0.9{a} libcommons-logging-java{a} libcommons-parent-java{a} libcups2{a} libcurl4{a} libdatrie1{a} libdav1d4{a} libdbus-1-3{a} libdebhelper-perl{a} libdeflate0{a} libdouble-conversion3{a} libdrm-amdgpu1{a} libdrm-common{a} libdrm-intel1{a} libdrm-nouveau2{a} libdrm-radeon1{a} libdrm2{a} libdw1{a} libedit2{a} libegl-dev{a} libegl-mesa0{a} libegl1{a} libeigen3-dev{a} libelf1{a} libevdev2{a} libevent-2.1-7{a} libexpat1{a} libexpat1-dev{a} libfftw3-bin{a} libfftw3-dev{a} libfftw3-double3{a} libfftw3-long3{a} libfftw3-quad3{a} libfftw3-single3{a} libfile-stripnondeterminism-perl{a} libfontbox-java{a} libfontconfig1{a} libfreetype6{a} libfribidi0{a} libgbm1{a} libgd3{a} libgdk-pixbuf-2.0-0{a} libgdk-pixbuf2.0-common{a} libgl-dev{a} libgl1{a} libgl1-mesa-dri{a} libglapi-mesa{a} libglew-dev{a} libglew2.1{a} libglib2.0-0{a} libglu1-mesa{a} libglu1-mesa-dev{a} libglvnd0{a} libglx-dev{a} libglx-mesa0{a} libglx0{a} libgme0{a} libgraphite2-3{a} libgs9{a} libgs9-common{a} libgsl-dev{a} libgsl25{a} libgslcblas0{a} libgsm1{a} libgstreamer-plugins-base1.0-0{a} libgstreamer1.0-0{a} libgts-0.7-5{a} libgudev-1.0-0{a} libgvc6{a} libgvpr2{a} libharfbuzz0b{a} libhyphen0{a} libice-dev{a} libice6{a} libicu-dev{a} libicu67{a} libidn11{a} libijs-0.35{a} libinput-bin{a} libinput10{a} libjbig0{a} libjbig2dec0{a} libjpeg62-turbo{a} libjs-jquery{a} libjs-sphinxdoc{a} libjs-underscore{a} libjsoncpp24{a} libkpathsea6{a} liblab-gamut1{a} liblcms2-2{a} libldap-2.4-2{a} libllvm11{a} libltdl7{a} libmagic-mgc{a} libmagic1{a} libmd0{a} libmd4c0{a} libminizip1{a} libmp3lame0{a} libmpdec3{a} libmpg123-0{a} libmtdev1{a} libncurses6{a} libnghttp2-14{a} libnorm1{a} libnspr4{a} libnss3{a} libnuma1{a} libogg0{a} libopenjp2-7{a} libopenmpt0{a} libopus0{a} liborc-0.4-0{a} libpango-1.0-0{a} libpangocairo-1.0-0{a} libpangoft2-1.0-0{a} libpaper-utils{a} libpaper1{a} libpathplan4{a} libpciaccess0{a} libpcre2-16-0{a} libpdfbox-java{a} libpgm-5.3-0{a} libpipeline1{a} libpixman-1-0{a} libpng16-16{a} libprocps8{a} libpsl5{a} libptexenc1{a} libpthread-stubs0-dev{a} libpython3-dev{a} libpython3-stdlib{a} libpython3.9{a} libpython3.9-dev{a} libpython3.9-minimal{a} libpython3.9-stdlib{a} libqt5concurrent5{a} libqt5core5a{a} libqt5dbus5{a} libqt5designer5{a} libqt5designercomponents5{a} libqt5gui5{a} libqt5help5{a} libqt5network5{a} libqt5opengl5{a} libqt5opengl5-dev{a} libqt5positioning5{a} libqt5positioning5-plugins{a} libqt5positioningquick5{a} libqt5printsupport5{a} libqt5qml5{a} libqt5qmlmodels5{a} libqt5qmlworkerscript5{a} libqt5quick5{a} libqt5quickparticles5{a} libqt5quickshapes5{a} libqt5quicktest5{a} libqt5quickwidgets5{a} libqt5sensors5{a} libqt5sql5{a} libqt5sql5-sqlite{a} libqt5test5{a} libqt5webchannel5{a} libqt5webchannel5-dev{a} libqt5webengine-data{a} libqt5webengine5{a} libqt5webenginecore5{a} libqt5webenginewidgets5{a} libqt5webkit5{a} libqt5widgets5{a} libqt5xml5{a} librabbitmq4{a} libre2-9{a} libreadline8{a} librhash0{a} librsvg2-2{a} librtmp1{a} libsasl2-2{a} libsasl2-modules-db{a} libsensors-config{a} libsensors5{a} libshine3{a} libsigsegv2{a} libsm-dev{a} libsm6{a} libsnappy1v5{a} libsodium23{a} libsoxr0{a} libspeex1{a} libsrt1.4-gnutls{a} libssh-gcrypt-4{a} libssh2-1{a} libsub-override-perl{a} libswresample3{a} libsynctex2{a} libteckit0{a} libtexlua53{a} libtexluajit2{a} libthai-data{a} libthai0{a} libtheora0{a} libtidy5deb1{a} libtiff5{a} libtool{a} libtwolame0{a} libuchardet0{a} libudfread0{a} libunwind8{a} libuv1{a} libva-drm2{a} libva-x11-2{a} libva2{a} libvdpau1{a} libvorbis0a{a} libvorbisenc2{a} libvorbisfile3{a} libvpx6{a} libvulkan-dev{a} libvulkan1{a} libwacom-common{a} libwacom2{a} libwavpack1{a} libwayland-client0{a} libwayland-server0{a} libwebp6{a} libwebpdemux2{a} libwebpmux3{a} libwoff1{a} libx11-6{a} libx11-data{a} libx11-dev{a} libx11-xcb1{a} libx264-160{a} libx265-192{a} libxau-dev{a} libxau6{a} libxaw7{a} libxcb-dri2-0{a} libxcb-dri3-0{a} libxcb-glx0{a} libxcb-icccm4{a} libxcb-image0{a} libxcb-keysyms1{a} libxcb-present0{a} libxcb-randr0{a} libxcb-render-util0{a} libxcb-render0{a} libxcb-shape0{a} libxcb-shm0{a} libxcb-sync1{a} libxcb-util1{a} libxcb-xfixes0{a} libxcb-xinerama0{a} libxcb-xinput0{a} libxcb-xkb1{a} libxcb1{a} libxcb1-dev{a} libxcomposite1{a} libxcursor1{a} libxdamage1{a} libxdmcp-dev{a} libxdmcp6{a} libxext-dev{a} libxext6{a} libxfixes3{a} libxi6{a} libxkbcommon-x11-0{a} libxkbcommon0{a} libxml2{a} libxmu-dev{a} libxmu-headers{a} libxmu6{a} libxpm4{a} libxrandr2{a} libxrender-dev{a} libxrender1{a} libxshmfence1{a} libxslt1.1{a} libxss1{a} libxt-dev{a} libxt6{a} libxvidcore4{a} libxxf86vm1{a} libz3-4{a} libzmq5{a} libzvbi-common{a} libzvbi0{a} libzzip-0-13{a} m4{a} man-db{a} media-types{a} ocl-icd-libopencl1{a} pkg-config{a} po-debconf{a} poppler-data{a} preview-latex-style{a} procps{a} python3{a} python3-dev{a} python3-distutils{a} python3-lib2to3{a} python3-minimal{a} python3-sip{a} python3-sip-dev{a} python3.9{a} python3.9-dev{a} python3.9-minimal{a} qdoc-qt5{a} qhelpgenerator-qt5{a} qt5-assistant{a} qt5-qmake{a} qt5-qmake-bin{a} qt5-qmltooling-plugins{a} qtattributionsscanner-qt5{a} qtbase5-dev{a} qtbase5-dev-tools{a} qtchooser{a} qtdeclarative5-dev{a} qtdeclarative5-dev-tools{a} qtpositioning5-dev{a} qttools5-dev{a} qttools5-dev-tools{a} qtwebengine5-dev{a} readline-common{a} sensible-utils{a} shared-mime-info{a} sip-dev{a} t1utils{a} tex-common{a} texlive-base{a} texlive-binaries{a} texlive-fonts-recommended{a} texlive-latex-base{a} texlive-latex-extra{a} texlive-latex-recommended{a} texlive-pictures{a} tidy{a} tzdata{a} ucf{a} x11-common{a} x11proto-dev{a} x11proto-xext-dev{a} xdg-utils{a} xkb-data{a} xorg-sgml-doctools{a} xtrans-dev{a} zlib1g-dev{a} 
The following packages are RECOMMENDED but will NOT be installed:
  alsa-topology-conf alsa-ucm-conf ca-certificates curl dbus dvisvgm fonts-droid-fallback fonts-liberation geoclue-2.0 gstreamer1.0-plugins-base i965-va-driver intel-media-va-driver javascript-common libaacs0 libarchive-cpio-perl libboost-date-time-dev libfile-mimeinfo-perl libfl-dev libgdk-pixbuf2.0-bin libglib2.0-data libgpm2 libgts-bin libldap-common libltdl-dev libmail-sendmail-perl libnet-dbus-perl libpam-cap libqt5svg5 librsvg2-common libsasl2-modules libssl-dev libvdpau-va-gl1 libwacom-bin libx11-protocol-perl lmodern lynx mesa-va-drivers mesa-vdpau-drivers mesa-vulkan-drivers psmisc publicsuffix qt5-gtk-platformtheme qttranslations5-l10n qtwebengine5-doc ruby tex-gyre texlive-plain-generic tipa tk va-driver-all vdpau-driver-all wget x11-utils x11-xserver-utils xdg-user-dirs 
0 packages upgraded, 426 newly installed, 0 to remove and 0 not upgraded.
Need to get 378 MB of archives. After unpacking 1519 MB will be used.
Writing extended state information...
Get: 1 http://deb.debian.org/debian bullseye/main i386 bsdextrautils i386 2.36.1-8+deb11u1 [149 kB]
Get: 2 http://deb.debian.org/debian bullseye/main i386 libuchardet0 i386 0.0.7-1 [67.9 kB]
Get: 3 http://deb.debian.org/debian bullseye/main i386 groff-base i386 1.22.4-6 [952 kB]
Get: 4 http://deb.debian.org/debian bullseye/main i386 libpipeline1 i386 1.5.3-1 [36.8 kB]
Get: 5 http://deb.debian.org/debian bullseye/main i386 man-db i386 2.9.4-2 [1367 kB]
Get: 6 http://deb.debian.org/debian bullseye/main i386 libsigsegv2 i386 2.13-1 [35.1 kB]
Get: 7 http://deb.debian.org/debian bullseye/main i386 m4 i386 1.4.18-5 [206 kB]
Get: 8 http://deb.debian.org/debian bullseye/main i386 flex i386 2.6.4-8 [434 kB]
Get: 9 http://deb.debian.org/debian bullseye/main i386 libglib2.0-0 i386 2.66.8-1 [1437 kB]
Get: 10 http://deb.debian.org/debian bullseye/main i386 libcap2 i386 1:2.44-1 [24.5 kB]
Get: 11 http://deb.debian.org/debian bullseye/main i386 libelf1 i386 0.183-1 [171 kB]
Get: 12 http://deb.debian.org/debian bullseye/main i386 libdw1 i386 0.183-1 [269 kB]
Get: 13 http://deb.debian.org/debian bullseye/main i386 libunwind8 i386 1.3.2-2 [53.2 kB]
Get: 14 http://deb.debian.org/debian bullseye/main i386 libcap2-bin i386 1:2.44-1 [33.1 kB]
Get: 15 http://deb.debian.org/debian bullseye/main i386 libgstreamer1.0-0 i386 1.18.4-2.1 [2255 kB]
Get: 16 http://deb.debian.org/debian bullseye/main i386 liborc-0.4-0 i386 1:0.4.32-1 [207 kB]
Get: 17 http://deb.debian.org/debian bullseye/main i386 iso-codes all 4.6.0-1 [2824 kB]
Get: 18 http://deb.debian.org/debian bullseye/main i386 libgstreamer-plugins-base1.0-0 i386 1.18.4-2+deb11u1 [2178 kB]
Get: 19 http://deb.debian.org/debian bullseye/main i386 libhyphen0 i386 2.8.8-7 [32.3 kB]
Get: 20 http://deb.debian.org/debian bullseye/main i386 libicu67 i386 67.1-7 [8775 kB]
Get: 21 http://deb.debian.org/debian bullseye/main i386 libjpeg62-turbo i386 1:2.0.6-4 [160 kB]
Get: 22 http://deb.debian.org/debian bullseye/main i386 libpng16-16 i386 1.6.37-3 [303 kB]
Get: 23 http://deb.debian.org/debian bullseye/main i386 libxml2 i386 2.9.10+dfsg-6.7+deb11u4 [728 kB]
Get: 24 http://deb.debian.org/debian bullseye/main i386 shared-mime-info i386 2.0-1 [703 kB]
Get: 25 http://deb.debian.org/debian bullseye/main i386 libdouble-conversion3 i386 3.1.5-6.1 [44.8 kB]
Get: 26 http://deb.debian.org/debian bullseye/main i386 libpcre2-16-0 i386 10.36-2+deb11u1 [232 kB]
Get: 27 http://deb.debian.org/debian bullseye/main i386 libqt5core5a i386 5.15.2+dfsg-9 [2539 kB]
Get: 28 http://deb.debian.org/debian bullseye/main i386 libexpat1 i386 2.2.10-2+deb11u5 [101 kB]
Get: 29 http://deb.debian.org/debian bullseye/main i386 libbrotli1 i386 1.0.9-2+b2 [286 kB]
Get: 30 http://deb.debian.org/debian bullseye/main i386 libfreetype6 i386 2.10.4+dfsg-1+deb11u1 [430 kB]
Get: 31 http://deb.debian.org/debian bullseye/main i386 sensible-utils all 0.0.14 [14.8 kB]
Get: 32 http://deb.debian.org/debian bullseye/main i386 ucf all 3.0043 [74.0 kB]
Get: 33 http://deb.debian.org/debian bullseye/main i386 fonts-dejavu-core all 2.37-2 [1069 kB]
Get: 34 http://deb.debian.org/debian bullseye/main i386 fonts-urw-base35 all 20200910-1 [6367 kB]
Get: 35 http://deb.debian.org/debian bullseye/main i386 fontconfig-config all 2.13.1-4.2 [281 kB]
Get: 36 http://deb.debian.org/debian bullseye/main i386 libfontconfig1 i386 2.13.1-4.2 [358 kB]
Get: 37 http://deb.debian.org/debian bullseye/main i386 fontconfig i386 2.13.1-4.2 [417 kB]
Get: 38 http://deb.debian.org/debian bullseye/main i386 libdrm-common all 2.4.104-1 [14.9 kB]
Get: 39 http://deb.debian.org/debian bullseye/main i386 libdrm2 i386 2.4.104-1 [44.3 kB]
Get: 40 http://deb.debian.org/debian bullseye/main i386 libglvnd0 i386 1.3.2-1 [44.1 kB]
Get: 41 http://deb.debian.org/debian bullseye/main i386 libwayland-server0 i386 1.18.0-2~exp1.1 [36.0 kB]
Get: 42 http://deb.debian.org/debian bullseye/main i386 libgbm1 i386 20.3.5-1 [74.7 kB]
Get: 43 http://deb.debian.org/debian bullseye/main i386 libglapi-mesa i386 20.3.5-1 [71.9 kB]
Get: 44 http://deb.debian.org/debian bullseye/main i386 libwayland-client0 i386 1.18.0-2~exp1.1 [27.7 kB]
Get: 45 http://deb.debian.org/debian bullseye/main i386 libxau6 i386 1:1.0.9-1 [20.0 kB]
Get: 46 http://deb.debian.org/debian bullseye/main i386 libmd0 i386 1.0.3-3 [28.9 kB]
Get: 47 http://deb.debian.org/debian bullseye/main i386 libbsd0 i386 0.11.3-1+deb11u1 [111 kB]
Get: 48 http://deb.debian.org/debian bullseye/main i386 libxdmcp6 i386 1:1.1.2-3 [26.7 kB]
Get: 49 http://deb.debian.org/debian bullseye/main i386 libxcb1 i386 1.14-3 [144 kB]
Get: 50 http://deb.debian.org/debian bullseye/main i386 libx11-data all 2:1.7.2-1+deb11u1 [311 kB]
Get: 51 http://deb.debian.org/debian bullseye/main i386 libx11-6 i386 2:1.7.2-1+deb11u1 [796 kB]
Get: 52 http://deb.debian.org/debian bullseye/main i386 libx11-xcb1 i386 2:1.7.2-1+deb11u1 [203 kB]
Get: 53 http://deb.debian.org/debian bullseye/main i386 libxcb-dri2-0 i386 1.14-3 [103 kB]
Get: 54 http://deb.debian.org/debian bullseye/main i386 libxcb-dri3-0 i386 1.14-3 [103 kB]
Get: 55 http://deb.debian.org/debian bullseye/main i386 libxcb-present0 i386 1.14-3 [101 kB]
Get: 56 http://deb.debian.org/debian bullseye/main i386 libxcb-sync1 i386 1.14-3 [105 kB]
Get: 57 http://deb.debian.org/debian bullseye/main i386 libxcb-xfixes0 i386 1.14-3 [105 kB]
Get: 58 http://deb.debian.org/debian bullseye/main i386 libxshmfence1 i386 1.3-1 [8976 B]
Get: 59 http://deb.debian.org/debian bullseye/main i386 libegl-mesa0 i386 20.3.5-1 [148 kB]
Get: 60 http://deb.debian.org/debian bullseye/main i386 libegl1 i386 1.3.2-1 [36.7 kB]
Get: 61 http://deb.debian.org/debian bullseye/main i386 libxcb-glx0 i386 1.14-3 [120 kB]
Get: 62 http://deb.debian.org/debian bullseye/main i386 libxcb-shm0 i386 1.14-3 [102 kB]
Get: 63 http://deb.debian.org/debian bullseye/main i386 libxdamage1 i386 1:1.1.5-2 [15.9 kB]
Get: 64 http://deb.debian.org/debian bullseye/main i386 libxext6 i386 2:1.3.3-1.1 [55.2 kB]
Get: 65 http://deb.debian.org/debian bullseye/main i386 libxfixes3 i386 1:5.0.3-2 [22.6 kB]
Get: 66 http://deb.debian.org/debian bullseye/main i386 libxxf86vm1 i386 1:1.1.4-1+b2 [21.7 kB]
Get: 67 http://deb.debian.org/debian bullseye/main i386 libdrm-amdgpu1 i386 2.4.104-1 [31.5 kB]
Get: 68 http://deb.debian.org/debian bullseye/main i386 libpciaccess0 i386 0.16-1 [55.7 kB]
Get: 69 http://deb.debian.org/debian bullseye/main i386 libdrm-intel1 i386 2.4.104-1 [74.5 kB]
Get: 70 http://deb.debian.org/debian bullseye/main i386 libdrm-nouveau2 i386 2.4.104-1 [28.5 kB]
Get: 71 http://deb.debian.org/debian bullseye/main i386 libdrm-radeon1 i386 2.4.104-1 [31.4 kB]
Get: 72 http://deb.debian.org/debian bullseye/main i386 libedit2 i386 3.1-20191231-2+b1 [101 kB]
Get: 73 http://deb.debian.org/debian bullseye/main i386 libz3-4 i386 4.8.10-1 [7737 kB]
Get: 74 http://deb.debian.org/debian bullseye/main i386 libllvm11 i386 1:11.0.1-2 [17.7 MB]
Get: 75 http://deb.debian.org/debian bullseye/main i386 libsensors-config all 1:3.6.0-7 [32.3 kB]
Get: 76 http://deb.debian.org/debian bullseye/main i386 libsensors5 i386 1:3.6.0-7 [53.2 kB]
Get: 77 http://deb.debian.org/debian bullseye/main i386 libvulkan1 i386 1.2.162.0-1 [110 kB]
Get: 78 http://deb.debian.org/debian bullseye/main i386 libgl1-mesa-dri i386 20.3.5-1 [9948 kB]
Get: 79 http://deb.debian.org/debian bullseye/main i386 libglx-mesa0 i386 20.3.5-1 [195 kB]
Get: 80 http://deb.debian.org/debian bullseye/main i386 libglx0 i386 1.3.2-1 [39.1 kB]
Get: 81 http://deb.debian.org/debian bullseye/main i386 libgl1 i386 1.3.2-1 [83.6 kB]
Get: 82 http://deb.debian.org/debian bullseye/main i386 libgraphite2-3 i386 1.3.14-1 [84.0 kB]
Get: 83 http://deb.debian.org/debian bullseye/main i386 libharfbuzz0b i386 2.7.4-1 [1490 kB]
Get: 84 http://deb.debian.org/debian bullseye/main i386 x11-common all 1:7.7+22 [252 kB]
Get: 85 http://deb.debian.org/debian bullseye/main i386 libice6 i386 2:1.0.10-1 [60.8 kB]
Get: 86 http://deb.debian.org/debian bullseye/main i386 libevdev2 i386 1.11.0+dfsg-1 [32.4 kB]
Get: 87 http://deb.debian.org/debian bullseye/main i386 libmtdev1 i386 1.1.6-1 [23.5 kB]
Get: 88 http://deb.debian.org/debian bullseye/main i386 libgudev-1.0-0 i386 234-1 [15.2 kB]
Get: 89 http://deb.debian.org/debian bullseye/main i386 libwacom-common all 1.8-2 [49.7 kB]
Get: 90 http://deb.debian.org/debian bullseye/main i386 libwacom2 i386 1.8-2 [23.0 kB]
Get: 91 http://deb.debian.org/debian bullseye/main i386 libinput-bin i386 1.16.4-3 [23.6 kB]
Get: 92 http://deb.debian.org/debian bullseye/main i386 libinput10 i386 1.16.4-3 [131 kB]
Get: 93 http://deb.debian.org/debian bullseye/main i386 libmd4c0 i386 0.4.7-2 [44.3 kB]
Get: 94 http://deb.debian.org/debian bullseye/main i386 libdbus-1-3 i386 1.12.28-0+deb11u1 [236 kB]
Get: 95 http://deb.debian.org/debian bullseye/main i386 libqt5dbus5 i386 5.15.2+dfsg-9 [254 kB]
Get: 96 http://deb.debian.org/debian bullseye/main i386 libqt5network5 i386 5.15.2+dfsg-9 [746 kB]
Get: 97 http://deb.debian.org/debian bullseye/main i386 libsm6 i386 2:1.2.3-1 [35.7 kB]
Get: 98 http://deb.debian.org/debian bullseye/main i386 libxcb-icccm4 i386 0.4.1-1.1 [28.1 kB]
Get: 99 http://deb.debian.org/debian bullseye/main i386 libxcb-util1 i386 0.4.0-1+b1 [23.6 kB]
Get: 100 http://deb.debian.org/debian bullseye/main i386 libxcb-image0 i386 0.4.0-1+b3 [24.8 kB]
Get: 101 http://deb.debian.org/debian bullseye/main i386 libxcb-keysyms1 i386 0.4.0-1+b2 [16.7 kB]
Get: 102 http://deb.debian.org/debian bullseye/main i386 libxcb-randr0 i386 1.14-3 [114 kB]
Get: 103 http://deb.debian.org/debian bullseye/main i386 libxcb-render0 i386 1.14-3 [112 kB]
Get: 104 http://deb.debian.org/debian bullseye/main i386 libxcb-render-util0 i386 0.3.9-1+b1 [18.7 kB]
Get: 105 http://deb.debian.org/debian bullseye/main i386 libxcb-shape0 i386 1.14-3 [102 kB]
Get: 106 http://deb.debian.org/debian bullseye/main i386 libxcb-xinerama0 i386 1.14-3 [101 kB]
Get: 107 http://deb.debian.org/debian bullseye/main i386 libxcb-xinput0 i386 1.14-3 [129 kB]
Get: 108 http://deb.debian.org/debian bullseye/main i386 libxcb-xkb1 i386 1.14-3 [127 kB]
Get: 109 http://deb.debian.org/debian bullseye/main i386 xkb-data all 2.29-2 [655 kB]
Get: 110 http://deb.debian.org/debian bullseye/main i386 libxkbcommon0 i386 1.0.3-2 [107 kB]
Get: 111 http://deb.debian.org/debian bullseye/main i386 libxkbcommon-x11-0 i386 1.0.3-2 [17.6 kB]
Get: 112 http://deb.debian.org/debian bullseye/main i386 libxrender1 i386 1:0.9.10-1 [34.1 kB]
Get: 113 http://deb.debian.org/debian bullseye/main i386 libqt5gui5 i386 5.15.2+dfsg-9 [5795 kB]
Get: 114 http://deb.debian.org/debian bullseye/main i386 libqt5positioning5 i386 5.15.2+dfsg-2 [229 kB]
Get: 115 http://deb.debian.org/debian bullseye/main i386 libavahi-common-data i386 0.8-5+deb11u2 [124 kB]
Get: 116 http://deb.debian.org/debian bullseye/main i386 libavahi-common3 i386 0.8-5+deb11u2 [60.4 kB]
Get: 117 http://deb.debian.org/debian bullseye/main i386 libavahi-client3 i386 0.8-5+deb11u2 [64.6 kB]
Get: 118 http://deb.debian.org/debian bullseye/main i386 libcups2 i386 2.3.3op2-3+deb11u6 [367 kB]
Get: 119 http://deb.debian.org/debian bullseye/main i386 libqt5widgets5 i386 5.15.2+dfsg-9 [2628 kB]
Get: 120 http://deb.debian.org/debian bullseye/main i386 libqt5printsupport5 i386 5.15.2+dfsg-9 [239 kB]
Get: 121 http://deb.debian.org/debian bullseye/main i386 libqt5qml5 i386 5.15.2+dfsg-6 [1435 kB]
Get: 122 http://deb.debian.org/debian bullseye/main i386 libqt5qmlmodels5 i386 5.15.2+dfsg-6 [216 kB]
Get: 123 http://deb.debian.org/debian bullseye/main i386 libqt5quick5 i386 5.15.2+dfsg-6 [1705 kB]
Get: 124 http://deb.debian.org/debian bullseye/main i386 libqt5sensors5 i386 5.15.2-2 [120 kB]
Get: 125 http://deb.debian.org/debian bullseye/main i386 libqt5webchannel5 i386 5.15.2-2 [64.6 kB]
Get: 126 http://deb.debian.org/debian bullseye/main i386 libwebp6 i386 0.6.1-2.1+deb11u2 [269 kB]
Get: 127 http://deb.debian.org/debian bullseye/main i386 libwoff1 i386 1.0.2-1+b1 [46.2 kB]
Get: 128 http://deb.debian.org/debian bullseye/main i386 libxslt1.1 i386 1.1.34-4+deb11u1 [251 kB]
Get: 129 http://deb.debian.org/debian bullseye/main i386 libqt5webkit5 i386 5.212.0~alpha4-11 [12.1 MB]
Get: 130 http://deb.debian.org/debian bullseye/main i386 poppler-data all 0.4.10-1 [1602 kB]
Get: 131 http://deb.debian.org/debian bullseye/main i386 libpython3.9-minimal i386 3.9.2-1 [801 kB]
Get: 132 http://deb.debian.org/debian bullseye/main i386 python3.9-minimal i386 3.9.2-1 [1956 kB]
Get: 133 http://deb.debian.org/debian bullseye/main i386 python3-minimal i386 3.9.2-3 [38.2 kB]
Get: 134 http://deb.debian.org/debian bullseye/main i386 media-types all 4.0.0 [30.3 kB]
Get: 135 http://deb.debian.org/debian bullseye/main i386 tzdata all 2021a-1+deb11u10 [286 kB]
Get: 136 http://deb.debian.org/debian bullseye/main i386 libmpdec3 i386 2.5.1-1 [91.9 kB]
Get: 137 http://deb.debian.org/debian bullseye/main i386 readline-common all 8.1-1 [73.7 kB]
Get: 138 http://deb.debian.org/debian bullseye/main i386 libreadline8 i386 8.1-1 [173 kB]
Get: 139 http://deb.debian.org/debian bullseye/main i386 libpython3.9-stdlib i386 3.9.2-1 [1703 kB]
Get: 140 http://deb.debian.org/debian bullseye/main i386 python3.9 i386 3.9.2-1 [466 kB]
Get: 141 http://deb.debian.org/debian bullseye/main i386 libpython3-stdlib i386 3.9.2-3 [21.4 kB]
Get: 142 http://deb.debian.org/debian bullseye/main i386 python3 i386 3.9.2-3 [37.9 kB]
Get: 143 http://deb.debian.org/debian bullseye/main i386 tex-common all 6.16 [53.7 kB]
Get: 144 http://deb.debian.org/debian bullseye/main i386 libncurses6 i386 6.2+20201114-2+deb11u2 [110 kB]
Get: 145 http://deb.debian.org/debian bullseye/main i386 libprocps8 i386 2:3.3.17-5 [64.2 kB]
Get: 146 http://deb.debian.org/debian bullseye/main i386 procps i386 2:3.3.17-5 [501 kB]
Get: 147 http://deb.debian.org/debian bullseye/main i386 libmagic-mgc i386 1:5.39-3+deb11u1 [273 kB]
Get: 148 http://deb.debian.org/debian bullseye/main i386 libmagic1 i386 1:5.39-3+deb11u1 [135 kB]
Get: 149 http://deb.debian.org/debian bullseye/main i386 file i386 1:5.39-3+deb11u1 [69.2 kB]
Get: 150 http://deb.debian.org/debian bullseye/main i386 gettext-base i386 0.21-4 [176 kB]
Get: 151 http://deb.debian.org/debian bullseye/main i386 autoconf all 2.69-14 [313 kB]
Get: 152 http://deb.debian.org/debian bullseye/main i386 autotools-dev all 20180224.1+nmu1 [77.1 kB]
Get: 153 http://deb.debian.org/debian bullseye/main i386 automake all 1:1.16.3-2 [814 kB]
Get: 154 http://deb.debian.org/debian bullseye/main i386 autopoint all 0.21-4 [510 kB]
Get: 155 http://deb.debian.org/debian bullseye/main i386 bison i386 2:3.7.5+dfsg-1 [1114 kB]
Get: 156 http://deb.debian.org/debian bullseye/main i386 chrpath i386 0.16-2+b1 [17.5 kB]
Get: 157 http://deb.debian.org/debian bullseye/main i386 cmake-data all 3.18.4-2+deb11u1 [1725 kB]
Get: 158 http://deb.debian.org/debian bullseye/main i386 libarchive13 i386 3.4.3-2+deb11u1 [384 kB]
Get: 159 http://deb.debian.org/debian bullseye/main i386 libsasl2-modules-db i386 2.1.27+dfsg-2.1+deb11u1 [70.1 kB]
Get: 160 http://deb.debian.org/debian bullseye/main i386 libsasl2-2 i386 2.1.27+dfsg-2.1+deb11u1 [110 kB]
Get: 161 http://deb.debian.org/debian bullseye/main i386 libldap-2.4-2 i386 2.4.57+dfsg-3+deb11u1 [244 kB]
Get: 162 http://deb.debian.org/debian bullseye/main i386 libnghttp2-14 i386 1.43.0-1 [85.7 kB]
Get: 163 http://deb.debian.org/debian bullseye/main i386 libpsl5 i386 0.21.0-1.2 [57.9 kB]
Get: 164 http://deb.debian.org/debian bullseye/main i386 librtmp1 i386 2.4+20151223.gitfa8646d.1-2+b2 [64.3 kB]
Get: 165 http://deb.debian.org/debian bullseye/main i386 libssh2-1 i386 1.9.0-2 [164 kB]
Get: 166 http://deb.debian.org/debian bullseye/main i386 libcurl4 i386 7.74.0-1.3+deb11u9 [377 kB]
Get: 167 http://deb.debian.org/debian bullseye/main i386 libjsoncpp24 i386 1.9.4-4 [86.1 kB]
Get: 168 http://deb.debian.org/debian bullseye/main i386 librhash0 i386 1.4.1-2 [144 kB]
Get: 169 http://deb.debian.org/debian bullseye/main i386 libuv1 i386 1.40.0-2 [139 kB]
Get: 170 http://deb.debian.org/debian bullseye/main i386 cmake i386 3.18.4-2+deb11u1 [7029 kB]
Get: 171 http://deb.debian.org/debian bullseye/main i386 libdebhelper-perl all 13.3.4 [189 kB]
Get: 172 http://deb.debian.org/debian bullseye/main i386 libtool all 2.4.6-15 [513 kB]
Get: 173 http://deb.debian.org/debian bullseye/main i386 dh-autoreconf all 20 [17.1 kB]
Get: 174 http://deb.debian.org/debian bullseye/main i386 libarchive-zip-perl all 1.68-1 [104 kB]
Get: 175 http://deb.debian.org/debian bullseye/main i386 libsub-override-perl all 0.09-2 [10.2 kB]
Get: 176 http://deb.debian.org/debian bullseye/main i386 libfile-stripnondeterminism-perl all 1.12.0-1 [26.3 kB]
Get: 177 http://deb.debian.org/debian bullseye/main i386 dh-strip-nondeterminism all 1.12.0-1 [15.4 kB]
Get: 178 http://deb.debian.org/debian bullseye/main i386 dwz i386 0.13+20210201-1 [179 kB]
Get: 179 http://deb.debian.org/debian bullseye/main i386 gettext i386 0.21-4 [1322 kB]
Get: 180 http://deb.debian.org/debian bullseye/main i386 intltool-debian all 0.35.0+20060710.5 [26.8 kB]
Get: 181 http://deb.debian.org/debian bullseye/main i386 po-debconf all 1.0.21+nmu1 [248 kB]
Get: 182 http://deb.debian.org/debian bullseye/main i386 debhelper all 13.3.4 [1049 kB]
Get: 183 http://deb.debian.org/debian bullseye/main i386 python3-lib2to3 all 3.9.2-1 [77.8 kB]
Get: 184 http://deb.debian.org/debian bullseye/main i386 python3-distutils all 3.9.2-1 [143 kB]
Get: 185 http://deb.debian.org/debian bullseye/main i386 dh-python all 4.20201102+nmu1 [99.4 kB]
Get: 186 http://deb.debian.org/debian bullseye/main i386 libclang-cpp11 i386 1:11.0.1-2 [9562 kB]
Get: 187 http://deb.debian.org/debian bullseye/main i386 libclang1-11 i386 1:11.0.1-2 [5429 kB]
Get: 188 http://deb.debian.org/debian bullseye/main i386 doxygen i386 1.9.1-1 [4426 kB]
Get: 189 http://deb.debian.org/debian bullseye/main i386 fonts-lmodern all 2.004.5-6.1 [4540 kB]
Get: 190 http://deb.debian.org/debian bullseye/main i386 libgs9-common all 9.53.3~dfsg-7+deb11u6 [735 kB]
Get: 191 http://deb.debian.org/debian bullseye/main i386 libidn11 i386 1.33-3 [117 kB]
Get: 192 http://deb.debian.org/debian bullseye/main i386 libijs-0.35 i386 0.35-15 [16.9 kB]
Get: 193 http://deb.debian.org/debian bullseye/main i386 libjbig2dec0 i386 0.19-2 [69.9 kB]
Get: 194 http://deb.debian.org/debian bullseye/main i386 liblcms2-2 i386 2.12~rc1-2 [161 kB]
Get: 195 http://deb.debian.org/debian bullseye/main i386 libopenjp2-7 i386 2.4.0-3 [179 kB]
Get: 196 http://deb.debian.org/debian bullseye/main i386 libpaper1 i386 1.1.28+b1 [21.7 kB]
Get: 197 http://deb.debian.org/debian bullseye/main i386 libdeflate0 i386 1.7-1 [48.4 kB]
Get: 198 http://deb.debian.org/debian bullseye/main i386 libjbig0 i386 2.1-3.1+b2 [31.5 kB]
Get: 199 http://deb.debian.org/debian bullseye/main i386 libtiff5 i386 4.2.0-1+deb11u4 [305 kB]
Get: 200 http://deb.debian.org/debian bullseye/main i386 libgs9 i386 9.53.3~dfsg-7+deb11u6 [2365 kB]
Get: 201 http://deb.debian.org/debian bullseye/main i386 ghostscript i386 9.53.3~dfsg-7+deb11u6 [98.4 kB]
Get: 202 http://deb.debian.org/debian bullseye/main i386 libcdt5 i386 2.42.2-5 [62.6 kB]
Get: 203 http://deb.debian.org/debian bullseye/main i386 libcgraph6 i386 2.42.2-5 [89.8 kB]
Get: 204 http://deb.debian.org/debian bullseye/main i386 libxpm4 i386 1:3.5.12-1.1~deb11u1 [51.2 kB]
Get: 205 http://deb.debian.org/debian bullseye/main i386 libgd3 i386 2.3.0-2 [142 kB]
Get: 206 http://deb.debian.org/debian bullseye/main i386 libgts-0.7-5 i386 0.7.6+darcs121130-4+b1 [161 kB]
Get: 207 http://deb.debian.org/debian bullseye/main i386 libpixman-1-0 i386 0.40.0-1.1~deb11u1 [545 kB]
Get: 208 http://deb.debian.org/debian bullseye/main i386 libcairo2 i386 1.16.0-5 [746 kB]
Get: 209 http://deb.debian.org/debian bullseye/main i386 libltdl7 i386 2.4.6-15 [392 kB]
Get: 210 http://deb.debian.org/debian bullseye/main i386 libfribidi0 i386 1.0.8-2+deb11u1 [65.6 kB]
Get: 211 http://deb.debian.org/debian bullseye/main i386 libthai-data all 0.1.28-3 [170 kB]
Get: 212 http://deb.debian.org/debian bullseye/main i386 libdatrie1 i386 0.2.13-1 [44.5 kB]
Get: 213 http://deb.debian.org/debian bullseye/main i386 libthai0 i386 0.1.28-3 [55.3 kB]
Get: 214 http://deb.debian.org/debian bullseye/main i386 libpango-1.0-0 i386 1.46.2-3 [197 kB]
Get: 215 http://deb.debian.org/debian bullseye/main i386 libpangoft2-1.0-0 i386 1.46.2-3 [65.1 kB]
Get: 216 http://deb.debian.org/debian bullseye/main i386 libpangocairo-1.0-0 i386 1.46.2-3 [51.9 kB]
Get: 217 http://deb.debian.org/debian bullseye/main i386 libpathplan4 i386 2.42.2-5 [64.5 kB]
Get: 218 http://deb.debian.org/debian bullseye/main i386 libgvc6 i386 2.42.2-5 [728 kB]
Get: 219 http://deb.debian.org/debian bullseye/main i386 libgvpr2 i386 2.42.2-5 [221 kB]
Get: 220 http://deb.debian.org/debian bullseye/main i386 liblab-gamut1 i386 2.42.2-5 [221 kB]
Get: 221 http://deb.debian.org/debian bullseye/main i386 libxt6 i386 1:1.2.0-1 [195 kB]
Get: 222 http://deb.debian.org/debian bullseye/main i386 libxmu6 i386 2:1.1.2-2+b3 [62.8 kB]
Get: 223 http://deb.debian.org/debian bullseye/main i386 libxaw7 i386 2:1.0.13-1.1 [210 kB]
Get: 224 http://deb.debian.org/debian bullseye/main i386 graphviz i386 2.42.2-5 [594 kB]
Get: 225 http://deb.debian.org/debian bullseye/main i386 icu-devtools i386 67.1-7 [209 kB]
Get: 226 http://deb.debian.org/debian bullseye/main i386 libaom0 i386 1.0.0.errata1-3+deb11u1 [1150 kB]
Get: 227 http://deb.debian.org/debian bullseye/main i386 libapache-pom-java all 18-1 [4676 B]
Get: 228 http://deb.debian.org/debian bullseye/main i386 libasio-dev all 1:1.18.1-1 [354 kB]
Get: 229 http://deb.debian.org/debian bullseye/main i386 libasound2-data all 1.2.4-1.1 [38.2 kB]
Get: 230 http://deb.debian.org/debian bullseye/main i386 libasound2 i386 1.2.4-1.1 [379 kB]
Get: 231 http://deb.debian.org/debian bullseye/main i386 libva2 i386 2.10.0-1 [71.7 kB]
Get: 232 http://deb.debian.org/debian bullseye/main i386 libva-drm2 i386 2.10.0-1 [19.3 kB]
Get: 233 http://deb.debian.org/debian bullseye/main i386 libva-x11-2 i386 2.10.0-1 [24.6 kB]
Get: 234 http://deb.debian.org/debian bullseye/main i386 libvdpau1 i386 1.4-3 [28.2 kB]
Get: 235 http://deb.debian.org/debian bullseye/main i386 ocl-icd-libopencl1 i386 2.2.14-2 [45.0 kB]
Get: 236 http://deb.debian.org/debian bullseye/main i386 libavutil56 i386 7:4.3.6-0+deb11u1 [319 kB]
Get: 237 http://deb.debian.org/debian bullseye/main i386 libcodec2-0.9 i386 0.9.2-4 [7889 kB]
Get: 238 http://deb.debian.org/debian bullseye/main i386 libdav1d4 i386 0.7.1-3 [262 kB]
Get: 239 http://deb.debian.org/debian bullseye/main i386 libgsm1 i386 1.0.18-2 [29.5 kB]
Get: 240 http://deb.debian.org/debian bullseye/main i386 libmp3lame0 i386 3.100-3 [365 kB]
Get: 241 http://deb.debian.org/debian bullseye/main i386 libopus0 i386 1.3.1-0.1 [191 kB]
Get: 242 http://deb.debian.org/debian bullseye/main i386 libcairo-gobject2 i386 1.16.0-5 [125 kB]
Get: 243 http://deb.debian.org/debian bullseye/main i386 libgdk-pixbuf2.0-common all 2.42.2+dfsg-1+deb11u1 [320 kB]
Get: 244 http://deb.debian.org/debian bullseye/main i386 libgdk-pixbuf-2.0-0 i386 2.42.2+dfsg-1+deb11u1 [156 kB]
Get: 245 http://deb.debian.org/debian bullseye/main i386 librsvg2-2 i386 2.50.3+dfsg-1+deb11u1 [2558 kB]
Get: 246 http://deb.debian.org/debian bullseye/main i386 libshine3 i386 3.1.1-2 [22.9 kB]
Get: 247 http://deb.debian.org/debian bullseye/main i386 libsnappy1v5 i386 1.1.8-1 [19.0 kB]
Get: 248 http://deb.debian.org/debian bullseye/main i386 libspeex1 i386 1.2~rc1.2-1.1 [93.6 kB]
Get: 249 http://deb.debian.org/debian bullseye/main i386 libsoxr0 i386 0.1.3-4 [79.5 kB]
Get: 250 http://deb.debian.org/debian bullseye/main i386 libswresample3 i386 7:4.3.6-0+deb11u1 [115 kB]
Get: 251 http://deb.debian.org/debian bullseye/main i386 libogg0 i386 1.3.4-0.1 [26.9 kB]
Get: 252 http://deb.debian.org/debian bullseye/main i386 libtheora0 i386 1.1.1+dfsg.1-15 [166 kB]
Get: 253 http://deb.debian.org/debian bullseye/main i386 libtwolame0 i386 0.4.0-2 [50.9 kB]
Get: 254 http://deb.debian.org/debian bullseye/main i386 libvorbis0a i386 1.3.7-1 [91.9 kB]
Get: 255 http://deb.debian.org/debian bullseye/main i386 libvorbisenc2 i386 1.3.7-1 [74.6 kB]
Get: 256 http://deb.debian.org/debian bullseye/main i386 libvpx6 i386 1.9.0-1+deb11u1 [809 kB]
Get: 257 http://deb.debian.org/debian bullseye/main i386 libwavpack1 i386 5.4.0-1 [92.5 kB]
Get: 258 http://deb.debian.org/debian bullseye/main i386 libwebpmux3 i386 0.6.1-2.1+deb11u2 [99.0 kB]
Get: 259 http://deb.debian.org/debian bullseye/main i386 libx264-160 i386 2:0.160.3011+gitcde9a93-2.1 [927 kB]
Get: 260 http://deb.debian.org/debian bullseye/main i386 libnuma1 i386 2.0.12-1+b1 [27.9 kB]
Get: 261 http://deb.debian.org/debian bullseye/main i386 libx265-192 i386 3.4-2 [668 kB]
Get: 262 http://deb.debian.org/debian bullseye/main i386 libxvidcore4 i386 2:1.3.7-1 [239 kB]
Get: 263 http://deb.debian.org/debian bullseye/main i386 libzvbi-common all 0.2.35-18 [64.6 kB]
Get: 264 http://deb.debian.org/debian bullseye/main i386 libzvbi0 i386 0.2.35-18 [276 kB]
Get: 265 http://deb.debian.org/debian bullseye/main i386 libavcodec58 i386 7:4.3.6-0+deb11u1 [4894 kB]
Get: 266 http://deb.debian.org/debian bullseye/main i386 libudfread0 i386 1.1.1-1 [17.6 kB]
Get: 267 http://deb.debian.org/debian bullseye/main i386 libbluray2 i386 1:1.2.1-4+deb11u2 [151 kB]
Get: 268 http://deb.debian.org/debian bullseye/main i386 libchromaprint1 i386 1.5.0-2 [42.9 kB]
Get: 269 http://deb.debian.org/debian bullseye/main i386 libgme0 i386 0.6.3-2 [134 kB]
Get: 270 http://deb.debian.org/debian bullseye/main i386 libmpg123-0 i386 1.26.4-1 [144 kB]
Get: 271 http://deb.debian.org/debian bullseye/main i386 libvorbisfile3 i386 1.3.7-1 [28.6 kB]
Get: 272 http://deb.debian.org/debian bullseye/main i386 libopenmpt0 i386 0.4.11-1 [669 kB]
Get: 273 http://deb.debian.org/debian bullseye/main i386 librabbitmq4 i386 0.10.0-1 [45.1 kB]
Get: 274 http://deb.debian.org/debian bullseye/main i386 libsrt1.4-gnutls i386 1.4.2-1.3 [296 kB]
Get: 275 http://deb.debian.org/debian bullseye/main i386 libssh-gcrypt-4 i386 0.9.7-0+deb11u1 [238 kB]
Get: 276 http://deb.debian.org/debian bullseye/main i386 libnorm1 i386 1.5.9+dfsg-2 [238 kB]
Get: 277 http://deb.debian.org/debian bullseye/main i386 libpgm-5.3-0 i386 5.3.128~dfsg-2 [168 kB]
Get: 278 http://deb.debian.org/debian bullseye/main i386 libsodium23 i386 1.0.18-1 [186 kB]
Get: 279 http://deb.debian.org/debian bullseye/main i386 libzmq5 i386 4.3.4-1 [300 kB]
Get: 280 http://deb.debian.org/debian bullseye/main i386 libavformat58 i386 7:4.3.6-0+deb11u1 [1198 kB]
Get: 281 http://deb.debian.org/debian bullseye/main i386 libboost1.74-dev i386 1.74.0-9 [9534 kB]
Get: 282 http://deb.debian.org/debian bullseye/main i386 libboost-atomic1.74.0 i386 1.74.0-9 [244 kB]
Get: 283 http://deb.debian.org/debian bullseye/main i386 libboost-atomic1.74-dev i386 1.74.0-9 [245 kB]
Get: 284 http://deb.debian.org/debian bullseye/main i386 libboost-chrono1.74.0 i386 1.74.0-9 [254 kB]
Get: 285 http://deb.debian.org/debian bullseye/main i386 libboost-chrono1.74-dev i386 1.74.0-9 [262 kB]
Get: 286 http://deb.debian.org/debian bullseye/main i386 libboost-date-time1.74.0 i386 1.74.0-9 [241 kB]
Get: 287 http://deb.debian.org/debian bullseye/main i386 libboost-serialization1.74.0 i386 1.74.0-9 [346 kB]
Get: 288 http://deb.debian.org/debian bullseye/main i386 libboost-serialization1.74-dev i386 1.74.0-9 [390 kB]
Get: 289 http://deb.debian.org/debian bullseye/main i386 libboost-date-time1.74-dev i386 1.74.0-9 [250 kB]
Get: 290 http://deb.debian.org/debian bullseye/main i386 libboost-dev i386 1.74.0.3 [4548 B]
Get: 291 http://deb.debian.org/debian bullseye/main i386 libboost-regex1.74.0 i386 1.74.0-9 [542 kB]
Get: 292 http://deb.debian.org/debian bullseye/main i386 libicu-dev i386 67.1-7 [9801 kB]
Get: 293 http://deb.debian.org/debian bullseye/main i386 libboost-regex1.74-dev i386 1.74.0-9 [618 kB]
Get: 294 http://deb.debian.org/debian bullseye/main i386 libboost-iostreams1.74-dev i386 1.74.0-9 [275 kB]
Get: 295 http://deb.debian.org/debian bullseye/main i386 libboost-iostreams-dev i386 1.74.0.3 [4320 B]
Get: 296 http://deb.debian.org/debian bullseye/main i386 libboost-math1.74.0 i386 1.74.0-9 [464 kB]
Get: 297 http://deb.debian.org/debian bullseye/main i386 libboost-math1.74-dev i386 1.74.0-9 [568 kB]
Get: 298 http://deb.debian.org/debian bullseye/main i386 libboost-math-dev i386 1.74.0.3 [4536 B]
Get: 299 http://deb.debian.org/debian bullseye/main i386 libboost-regex-dev i386 1.74.0.3 [4596 B]
Get: 300 http://deb.debian.org/debian bullseye/main i386 libboost-system1.74.0 i386 1.74.0-9 [241 kB]
Get: 301 http://deb.debian.org/debian bullseye/main i386 libboost-system1.74-dev i386 1.74.0-9 [243 kB]
Get: 302 http://deb.debian.org/debian bullseye/main i386 libboost-system-dev i386 1.74.0.3 [4472 B]
Get: 303 http://deb.debian.org/debian bullseye/main i386 libboost-thread1.74.0 i386 1.74.0-9 [282 kB]
Get: 304 http://deb.debian.org/debian bullseye/main i386 libboost-thread1.74-dev i386 1.74.0-9 [294 kB]
Get: 305 http://deb.debian.org/debian bullseye/main i386 libboost-thread-dev i386 1.74.0.3 [4356 B]
Get: 306 http://deb.debian.org/debian bullseye/main i386 libcommons-parent-java all 43-1 [10.8 kB]
Get: 307 http://deb.debian.org/debian bullseye/main i386 libcommons-logging-java all 1.2-2 [62.2 kB]
Get: 308 http://deb.debian.org/debian bullseye/main i386 xorg-sgml-doctools all 1:1.11-1.1 [22.1 kB]
Get: 309 http://deb.debian.org/debian bullseye/main i386 x11proto-dev all 2020.1-1 [594 kB]
Get: 310 http://deb.debian.org/debian bullseye/main i386 libxau-dev i386 1:1.0.9-1 [23.3 kB]
Get: 311 http://deb.debian.org/debian bullseye/main i386 libxdmcp-dev i386 1:1.1.2-3 [42.7 kB]
Get: 312 http://deb.debian.org/debian bullseye/main i386 xtrans-dev all 1.4.0-1 [98.7 kB]
Get: 313 http://deb.debian.org/debian bullseye/main i386 libpthread-stubs0-dev i386 0.4-1 [5340 B]
Get: 314 http://deb.debian.org/debian bullseye/main i386 libxcb1-dev i386 1.14-3 [181 kB]
Get: 315 http://deb.debian.org/debian bullseye/main i386 libx11-dev i386 2:1.7.2-1+deb11u1 [874 kB]
Get: 316 http://deb.debian.org/debian bullseye/main i386 libglx-dev i386 1.3.2-1 [16.3 kB]
Get: 317 http://deb.debian.org/debian bullseye/main i386 libgl-dev i386 1.3.2-1 [100 kB]
Get: 318 http://deb.debian.org/debian bullseye/main i386 libegl-dev i386 1.3.2-1 [19.5 kB]
Get: 319 http://deb.debian.org/debian bullseye/main i386 pkg-config i386 0.29.2-1 [66.3 kB]
Get: 320 http://deb.debian.org/debian bullseye/main i386 libeigen3-dev all 3.3.9-2 [858 kB]
Get: 321 http://deb.debian.org/debian bullseye/main i386 libevent-2.1-7 i386 2.1.12-stable-1 [203 kB]
Get: 322 http://deb.debian.org/debian bullseye/main i386 libexpat1-dev i386 2.2.10-2+deb11u5 [149 kB]
Get: 323 http://deb.debian.org/debian bullseye/main i386 libfftw3-double3 i386 3.3.8-2 [640 kB]
Get: 324 http://deb.debian.org/debian bullseye/main i386 libfftw3-long3 i386 3.3.8-2 [326 kB]
Get: 325 http://deb.debian.org/debian bullseye/main i386 libfftw3-quad3 i386 3.3.8-2 [1762 kB]
Get: 326 http://deb.debian.org/debian bullseye/main i386 libfftw3-single3 i386 3.3.8-2 [652 kB]
Get: 327 http://deb.debian.org/debian bullseye/main i386 libfftw3-bin i386 3.3.8-2 [53.5 kB]
Get: 328 http://deb.debian.org/debian bullseye/main i386 libfftw3-dev i386 3.3.8-2 [3170 kB]
Get: 329 http://deb.debian.org/debian bullseye/main i386 libfontbox-java all 1:1.8.16-2 [211 kB]
Get: 330 http://deb.debian.org/debian bullseye/main i386 libglew2.1 i386 2.1.0-4+b1 [154 kB]
Get: 331 http://deb.debian.org/debian bullseye/main i386 libglu1-mesa i386 9.0.1-1 [178 kB]
Get: 332 http://deb.debian.org/debian bullseye/main i386 libglu1-mesa-dev i386 9.0.1-1 [223 kB]
Get: 333 http://deb.debian.org/debian bullseye/main i386 libglew-dev i386 2.1.0-4+b1 [141 kB]
Get: 334 http://deb.debian.org/debian bullseye/main i386 libgslcblas0 i386 2.6+dfsg-2 [99.2 kB]
Get: 335 http://deb.debian.org/debian bullseye/main i386 libgsl25 i386 2.6+dfsg-2 [911 kB]
Get: 336 http://deb.debian.org/debian bullseye/main i386 libgsl-dev i386 2.6+dfsg-2 [1146 kB]
Get: 337 http://deb.debian.org/debian bullseye/main i386 libice-dev i386 2:1.0.10-1 [70.5 kB]
Get: 338 http://deb.debian.org/debian bullseye/main i386 libjs-jquery all 3.5.1+dfsg+~3.5.5-7 [315 kB]
Get: 339 http://deb.debian.org/debian bullseye/main i386 libjs-underscore all 1.9.1~dfsg-3 [100 kB]
Get: 340 http://deb.debian.org/debian bullseye/main i386 libjs-sphinxdoc all 3.4.3-2 [127 kB]
Get: 341 http://deb.debian.org/debian bullseye/main i386 libkpathsea6 i386 2020.20200327.54578-7+deb11u1 [176 kB]
Get: 342 http://deb.debian.org/debian bullseye/main i386 libminizip1 i386 1.1-8+b1 [24.3 kB]
Get: 343 http://deb.debian.org/debian bullseye/main i386 libnspr4 i386 2:4.29-1 [122 kB]
Get: 344 http://deb.debian.org/debian bullseye/main i386 libnss3 i386 2:3.61-1+deb11u3 [1385 kB]
Get: 345 http://deb.debian.org/debian bullseye/main i386 libpaper-utils i386 1.1.28+b1 [18.6 kB]
Get: 346 http://deb.debian.org/debian bullseye/main i386 libpdfbox-java all 1:1.8.16-2 [5205 kB]
Get: 347 http://deb.debian.org/debian bullseye/main i386 libptexenc1 i386 2020.20200327.54578-7+deb11u1 [65.2 kB]
Get: 348 http://deb.debian.org/debian bullseye/main i386 libpython3.9 i386 3.9.2-1 [1715 kB]
Get: 349 http://deb.debian.org/debian bullseye/main i386 libpython3.9-dev i386 3.9.2-1 [3822 kB]
Get: 350 http://deb.debian.org/debian bullseye/main i386 libpython3-dev i386 3.9.2-3 [21.7 kB]
Get: 351 http://deb.debian.org/debian bullseye/main i386 libqt5concurrent5 i386 5.15.2+dfsg-9 [71.7 kB]
Get: 352 http://deb.debian.org/debian bullseye/main i386 libqt5xml5 i386 5.15.2+dfsg-9 [161 kB]
Get: 353 http://deb.debian.org/debian bullseye/main i386 libqt5designer5 i386 5.15.2-5 [2814 kB]
Get: 354 http://deb.debian.org/debian bullseye/main i386 libqt5designercomponents5 i386 5.15.2-5 [803 kB]
Get: 355 http://deb.debian.org/debian bullseye/main i386 libqt5sql5 i386 5.15.2+dfsg-9 [156 kB]
Get: 356 http://deb.debian.org/debian bullseye/main i386 libqt5help5 i386 5.15.2-5 [163 kB]
Get: 357 http://deb.debian.org/debian bullseye/main i386 libqt5opengl5 i386 5.15.2+dfsg-9 [188 kB]
Get: 358 http://deb.debian.org/debian bullseye/main i386 libqt5test5 i386 5.15.2+dfsg-9 [176 kB]
Get: 359 http://deb.debian.org/debian bullseye/main i386 libvulkan-dev i386 1.2.162.0-1 [586 kB]
Get: 360 http://deb.debian.org/debian bullseye/main i386 x11proto-xext-dev all 2020.1-1 [3404 B]
Get: 361 http://deb.debian.org/debian bullseye/main i386 libxext-dev i386 2:1.3.3-1.1 [111 kB]
Get: 362 http://deb.debian.org/debian bullseye/main i386 qt5-qmake-bin i386 5.15.2+dfsg-9 [1129 kB]
Get: 363 http://deb.debian.org/debian bullseye/main i386 qtchooser i386 66-2 [27.8 kB]
Get: 364 http://deb.debian.org/debian bullseye/main i386 qt5-qmake i386 5.15.2+dfsg-9 [249 kB]
Get: 365 http://deb.debian.org/debian bullseye/main i386 qtbase5-dev-tools i386 5.15.2+dfsg-9 [847 kB]
Get: 366 http://deb.debian.org/debian bullseye/main i386 qtbase5-dev i386 5.15.2+dfsg-9 [1152 kB]
Get: 367 http://deb.debian.org/debian bullseye/main i386 libqt5opengl5-dev i386 5.15.2+dfsg-9 [77.9 kB]
Get: 368 http://deb.debian.org/debian bullseye/main i386 libqt5positioning5-plugins i386 5.15.2+dfsg-2 [74.3 kB]
Get: 369 http://deb.debian.org/debian bullseye/main i386 libqt5positioningquick5 i386 5.15.2+dfsg-2 [48.9 kB]
Get: 370 http://deb.debian.org/debian bullseye/main i386 libqt5qmlworkerscript5 i386 5.15.2+dfsg-6 [46.1 kB]
Get: 371 http://deb.debian.org/debian bullseye/main i386 libqt5quickparticles5 i386 5.15.2+dfsg-6 [216 kB]
Get: 372 http://deb.debian.org/debian bullseye/main i386 libqt5quickshapes5 i386 5.15.2+dfsg-6 [111 kB]
Get: 373 http://deb.debian.org/debian bullseye/main i386 libqt5quicktest5 i386 5.15.2+dfsg-6 [68.3 kB]
Get: 374 http://deb.debian.org/debian bullseye/main i386 libqt5quickwidgets5 i386 5.15.2+dfsg-6 [51.6 kB]
Get: 375 http://deb.debian.org/debian bullseye/main i386 libqt5sql5-sqlite i386 5.15.2+dfsg-9 [86.6 kB]
Get: 376 http://deb.debian.org/debian bullseye/main i386 qt5-qmltooling-plugins i386 5.15.2+dfsg-6 [201 kB]
Get: 377 http://deb.debian.org/debian bullseye/main i386 qtdeclarative5-dev-tools i386 5.15.2+dfsg-6 [655 kB]
Get: 378 http://deb.debian.org/debian bullseye/main i386 qtdeclarative5-dev i386 5.15.2+dfsg-6 [500 kB]
Get: 379 http://deb.debian.org/debian bullseye/main i386 libqt5webchannel5-dev i386 5.15.2-2 [11.9 kB]
Get: 380 http://deb.debian.org/debian bullseye/main i386 libqt5webengine-data all 5.15.2+dfsg-3 [6929 kB]
Get: 381 http://deb.debian.org/debian bullseye/main i386 libre2-9 i386 20210201+dfsg-1 [178 kB]
Get: 382 http://deb.debian.org/debian bullseye/main i386 libwebpdemux2 i386 0.6.1-2.1+deb11u2 [88.2 kB]
Get: 383 http://deb.debian.org/debian bullseye/main i386 libxcomposite1 i386 1:0.4.5-1 [16.9 kB]
Get: 384 http://deb.debian.org/debian bullseye/main i386 libxcursor1 i386 1:1.2.0-2 [38.8 kB]
Get: 385 http://deb.debian.org/debian bullseye/main i386 libxi6 i386 2:1.7.10-1 [85.1 kB]
Get: 386 http://deb.debian.org/debian bullseye/main i386 libxrandr2 i386 2:1.5.1-1 [39.3 kB]
Get: 387 http://deb.debian.org/debian bullseye/main i386 libxss1 i386 1:1.2.3-1 [18.1 kB]
Get: 388 http://deb.debian.org/debian bullseye/main i386 libqt5webenginecore5 i386 5.15.2+dfsg-3 [37.8 MB]
Get: 389 http://deb.debian.org/debian bullseye/main i386 libqt5webengine5 i386 5.15.2+dfsg-3 [169 kB]
Get: 390 http://deb.debian.org/debian bullseye/main i386 libqt5webenginewidgets5 i386 5.15.2+dfsg-3 [125 kB]
Get: 391 http://deb.debian.org/debian bullseye/main i386 libsm-dev i386 2:1.2.3-1 [38.8 kB]
Get: 392 http://deb.debian.org/debian bullseye/main i386 libsynctex2 i386 2020.20200327.54578-7+deb11u1 [86.1 kB]
Get: 393 http://deb.debian.org/debian bullseye/main i386 libteckit0 i386 2.5.10+ds1-3 [277 kB]
Get: 394 http://deb.debian.org/debian bullseye/main i386 libtexlua53 i386 2020.20200327.54578-7+deb11u1 [146 kB]
Get: 395 http://deb.debian.org/debian bullseye/main i386 libtexluajit2 i386 2020.20200327.54578-7+deb11u1 [284 kB]
Get: 396 http://deb.debian.org/debian bullseye/main i386 libtidy5deb1 i386 2:5.6.0-11 [211 kB]
Get: 397 http://deb.debian.org/debian bullseye/main i386 libxt-dev i386 1:1.2.0-1 [421 kB]
Get: 398 http://deb.debian.org/debian bullseye/main i386 libxmu-headers all 2:1.1.2-2 [51.9 kB]
Get: 399 http://deb.debian.org/debian bullseye/main i386 libxmu-dev i386 2:1.1.2-2+b3 [70.3 kB]
Get: 400 http://deb.debian.org/debian bullseye/main i386 libxrender-dev i386 1:0.9.10-1 [42.2 kB]
Get: 401 http://deb.debian.org/debian bullseye/main i386 libzzip-0-13 i386 0.13.62-3.3+deb11u1 [57.7 kB]
Get: 402 http://deb.debian.org/debian bullseye/main i386 preview-latex-style all 12.2-1 [201 kB]
Get: 403 http://deb.debian.org/debian bullseye/main i386 zlib1g-dev i386 1:1.2.11.dfsg-2+deb11u2 [194 kB]
Get: 404 http://deb.debian.org/debian bullseye/main i386 python3.9-dev i386 3.9.2-1 [515 kB]
Get: 405 http://deb.debian.org/debian bullseye/main i386 python3-dev i386 3.9.2-3 [24.8 kB]
Get: 406 http://deb.debian.org/debian bullseye/main i386 python3-sip i386 4.19.25+dfsg-1 [177 kB]
Get: 407 http://deb.debian.org/debian bullseye/main i386 sip-dev i386 4.19.25+dfsg-1 [263 kB]
Get: 408 http://deb.debian.org/debian bullseye/main i386 python3-sip-dev i386 4.19.25+dfsg-1 [120 kB]
Get: 409 http://deb.debian.org/debian bullseye/main i386 qdoc-qt5 i386 5.15.2-5 [646 kB]
Get: 410 http://deb.debian.org/debian bullseye/main i386 qhelpgenerator-qt5 i386 5.15.2-5 [67.2 kB]
Get: 411 http://deb.debian.org/debian bullseye/main i386 qt5-assistant i386 5.15.2-5 [368 kB]
Get: 412 http://deb.debian.org/debian bullseye/main i386 qtattributionsscanner-qt5 i386 5.15.2-5 [38.6 kB]
Get: 413 http://deb.debian.org/debian bullseye/main i386 qtpositioning5-dev i386 5.15.2+dfsg-2 [24.2 kB]
Get: 414 http://deb.debian.org/debian bullseye/main i386 qttools5-dev-tools i386 5.15.2-5 [1086 kB]
Get: 415 http://deb.debian.org/debian bullseye/main i386 qttools5-dev i386 5.15.2-5 [210 kB]
Get: 416 http://deb.debian.org/debian bullseye/main i386 qtwebengine5-dev i386 5.15.2+dfsg-3 [70.2 kB]
Get: 417 http://deb.debian.org/debian bullseye/main i386 t1utils i386 1.41-4 [62.3 kB]
Get: 418 http://deb.debian.org/debian bullseye/main i386 texlive-binaries i386 2020.20200327.54578-7+deb11u1 [10.1 MB]
Get: 419 http://deb.debian.org/debian bullseye/main i386 xdg-utils all 1.1.3-4.1 [75.5 kB]
Get: 420 http://deb.debian.org/debian bullseye/main i386 texlive-base all 2020.20210202-3 [20.8 MB]
Get: 421 http://deb.debian.org/debian bullseye/main i386 texlive-fonts-recommended all 2020.20210202-3 [5002 kB]
Get: 422 http://deb.debian.org/debian bullseye/main i386 texlive-latex-base all 2020.20210202-3 [1120 kB]
Get: 423 http://deb.debian.org/debian bullseye/main i386 texlive-latex-recommended all 2020.20210202-3 [14.5 MB]
Get: 424 http://deb.debian.org/debian bullseye/main i386 texlive-pictures all 2020.20210202-3 [6743 kB]
Get: 425 http://deb.debian.org/debian bullseye/main i386 texlive-latex-extra all 2020.20210202-3 [13.7 MB]
Get: 426 http://deb.debian.org/debian bullseye/main i386 tidy i386 2:5.6.0-11 [35.7 kB]
Fetched 378 MB in 9s (44.3 MB/s)
debconf: delaying package configuration, since apt-utils is not installed
Selecting previously unselected package bsdextrautils.
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(Reading database ... 17763 files and directories currently installed.)
Preparing to unpack .../000-bsdextrautils_2.36.1-8+deb11u1_i386.deb ...
Unpacking bsdextrautils (2.36.1-8+deb11u1) ...
Selecting previously unselected package libuchardet0:i386.
Preparing to unpack .../001-libuchardet0_0.0.7-1_i386.deb ...
Unpacking libuchardet0:i386 (0.0.7-1) ...
Selecting previously unselected package groff-base.
Preparing to unpack .../002-groff-base_1.22.4-6_i386.deb ...
Unpacking groff-base (1.22.4-6) ...
Selecting previously unselected package libpipeline1:i386.
Preparing to unpack .../003-libpipeline1_1.5.3-1_i386.deb ...
Unpacking libpipeline1:i386 (1.5.3-1) ...
Selecting previously unselected package man-db.
Preparing to unpack .../004-man-db_2.9.4-2_i386.deb ...
Unpacking man-db (2.9.4-2) ...
Selecting previously unselected package libsigsegv2:i386.
Preparing to unpack .../005-libsigsegv2_2.13-1_i386.deb ...
Unpacking libsigsegv2:i386 (2.13-1) ...
Selecting previously unselected package m4.
Preparing to unpack .../006-m4_1.4.18-5_i386.deb ...
Unpacking m4 (1.4.18-5) ...
Selecting previously unselected package flex.
Preparing to unpack .../007-flex_2.6.4-8_i386.deb ...
Unpacking flex (2.6.4-8) ...
Selecting previously unselected package libglib2.0-0:i386.
Preparing to unpack .../008-libglib2.0-0_2.66.8-1_i386.deb ...
Unpacking libglib2.0-0:i386 (2.66.8-1) ...
Selecting previously unselected package libcap2:i386.
Preparing to unpack .../009-libcap2_1%3a2.44-1_i386.deb ...
Unpacking libcap2:i386 (1:2.44-1) ...
Selecting previously unselected package libelf1:i386.
Preparing to unpack .../010-libelf1_0.183-1_i386.deb ...
Unpacking libelf1:i386 (0.183-1) ...
Selecting previously unselected package libdw1:i386.
Preparing to unpack .../011-libdw1_0.183-1_i386.deb ...
Unpacking libdw1:i386 (0.183-1) ...
Selecting previously unselected package libunwind8:i386.
Preparing to unpack .../012-libunwind8_1.3.2-2_i386.deb ...
Unpacking libunwind8:i386 (1.3.2-2) ...
Selecting previously unselected package libcap2-bin.
Preparing to unpack .../013-libcap2-bin_1%3a2.44-1_i386.deb ...
Unpacking libcap2-bin (1:2.44-1) ...
Selecting previously unselected package libgstreamer1.0-0:i386.
Preparing to unpack .../014-libgstreamer1.0-0_1.18.4-2.1_i386.deb ...
Unpacking libgstreamer1.0-0:i386 (1.18.4-2.1) ...
Selecting previously unselected package liborc-0.4-0:i386.
Preparing to unpack .../015-liborc-0.4-0_1%3a0.4.32-1_i386.deb ...
Unpacking liborc-0.4-0:i386 (1:0.4.32-1) ...
Selecting previously unselected package iso-codes.
Preparing to unpack .../016-iso-codes_4.6.0-1_all.deb ...
Unpacking iso-codes (4.6.0-1) ...
Selecting previously unselected package libgstreamer-plugins-base1.0-0:i386.
Preparing to unpack .../017-libgstreamer-plugins-base1.0-0_1.18.4-2+deb11u1_i386.deb ...
Unpacking libgstreamer-plugins-base1.0-0:i386 (1.18.4-2+deb11u1) ...
Selecting previously unselected package libhyphen0:i386.
Preparing to unpack .../018-libhyphen0_2.8.8-7_i386.deb ...
Unpacking libhyphen0:i386 (2.8.8-7) ...
Selecting previously unselected package libicu67:i386.
Preparing to unpack .../019-libicu67_67.1-7_i386.deb ...
Unpacking libicu67:i386 (67.1-7) ...
Selecting previously unselected package libjpeg62-turbo:i386.
Preparing to unpack .../020-libjpeg62-turbo_1%3a2.0.6-4_i386.deb ...
Unpacking libjpeg62-turbo:i386 (1:2.0.6-4) ...
Selecting previously unselected package libpng16-16:i386.
Preparing to unpack .../021-libpng16-16_1.6.37-3_i386.deb ...
Unpacking libpng16-16:i386 (1.6.37-3) ...
Selecting previously unselected package libxml2:i386.
Preparing to unpack .../022-libxml2_2.9.10+dfsg-6.7+deb11u4_i386.deb ...
Unpacking libxml2:i386 (2.9.10+dfsg-6.7+deb11u4) ...
Selecting previously unselected package shared-mime-info.
Preparing to unpack .../023-shared-mime-info_2.0-1_i386.deb ...
Unpacking shared-mime-info (2.0-1) ...
Selecting previously unselected package libdouble-conversion3:i386.
Preparing to unpack .../024-libdouble-conversion3_3.1.5-6.1_i386.deb ...
Unpacking libdouble-conversion3:i386 (3.1.5-6.1) ...
Selecting previously unselected package libpcre2-16-0:i386.
Preparing to unpack .../025-libpcre2-16-0_10.36-2+deb11u1_i386.deb ...
Unpacking libpcre2-16-0:i386 (10.36-2+deb11u1) ...
Selecting previously unselected package libqt5core5a:i386.
Preparing to unpack .../026-libqt5core5a_5.15.2+dfsg-9_i386.deb ...
Unpacking libqt5core5a:i386 (5.15.2+dfsg-9) ...
Selecting previously unselected package libexpat1:i386.
Preparing to unpack .../027-libexpat1_2.2.10-2+deb11u5_i386.deb ...
Unpacking libexpat1:i386 (2.2.10-2+deb11u5) ...
Selecting previously unselected package libbrotli1:i386.
Preparing to unpack .../028-libbrotli1_1.0.9-2+b2_i386.deb ...
Unpacking libbrotli1:i386 (1.0.9-2+b2) ...
Selecting previously unselected package libfreetype6:i386.
Preparing to unpack .../029-libfreetype6_2.10.4+dfsg-1+deb11u1_i386.deb ...
Unpacking libfreetype6:i386 (2.10.4+dfsg-1+deb11u1) ...
Selecting previously unselected package sensible-utils.
Preparing to unpack .../030-sensible-utils_0.0.14_all.deb ...
Unpacking sensible-utils (0.0.14) ...
Selecting previously unselected package ucf.
Preparing to unpack .../031-ucf_3.0043_all.deb ...
Moving old data out of the way
Unpacking ucf (3.0043) ...
Selecting previously unselected package fonts-dejavu-core.
Preparing to unpack .../032-fonts-dejavu-core_2.37-2_all.deb ...
Unpacking fonts-dejavu-core (2.37-2) ...
Selecting previously unselected package fonts-urw-base35.
Preparing to unpack .../033-fonts-urw-base35_20200910-1_all.deb ...
Unpacking fonts-urw-base35 (20200910-1) ...
Selecting previously unselected package fontconfig-config.
Preparing to unpack .../034-fontconfig-config_2.13.1-4.2_all.deb ...
Unpacking fontconfig-config (2.13.1-4.2) ...
Selecting previously unselected package libfontconfig1:i386.
Preparing to unpack .../035-libfontconfig1_2.13.1-4.2_i386.deb ...
Unpacking libfontconfig1:i386 (2.13.1-4.2) ...
Selecting previously unselected package fontconfig.
Preparing to unpack .../036-fontconfig_2.13.1-4.2_i386.deb ...
Unpacking fontconfig (2.13.1-4.2) ...
Selecting previously unselected package libdrm-common.
Preparing to unpack .../037-libdrm-common_2.4.104-1_all.deb ...
Unpacking libdrm-common (2.4.104-1) ...
Selecting previously unselected package libdrm2:i386.
Preparing to unpack .../038-libdrm2_2.4.104-1_i386.deb ...
Unpacking libdrm2:i386 (2.4.104-1) ...
Selecting previously unselected package libglvnd0:i386.
Preparing to unpack .../039-libglvnd0_1.3.2-1_i386.deb ...
Unpacking libglvnd0:i386 (1.3.2-1) ...
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Setting up libxml2:i386 (2.9.10+dfsg-6.7+deb11u4) ...
Setting up xdg-utils (1.1.3-4.1) ...
update-alternatives: using /usr/bin/xdg-open to provide /usr/bin/open (open) in auto mode
Setting up iso-codes (4.6.0-1) ...
Setting up libgudev-1.0-0:i386 (234-1) ...
Setting up libzvbi-common (0.2.35-18) ...
Setting up chrpath (0.16-2+b1) ...
Setting up libprocps8:i386 (2:3.3.17-5) ...
Setting up qtchooser (66-2) ...
Setting up libmp3lame0:i386 (3.100-3) ...
Setting up libvorbisenc2:i386 (1.3.7-1) ...
Setting up libsynctex2:i386 (2020.20200327.54578-7+deb11u1) ...
Setting up libjs-underscore (1.9.1~dfsg-3) ...
Setting up libboost-thread1.74.0:i386 (1.74.0-9) ...
Setting up libwacom-common (1.8-2) ...
Setting up libxkbcommon0:i386 (1.0.3-2) ...
Setting up libwayland-client0:i386 (1.18.0-2~exp1.1) ...
Setting up libgs9-common (9.53.3~dfsg-7+deb11u6) ...
Setting up x11proto-dev (2020.1-1) ...
Setting up libfile-stripnondeterminism-perl (1.12.0-1) ...
Setting up libzvbi0:i386 (0.2.35-18) ...
Setting up libice6:i386 (2:1.0.10-1) ...
Setting up libdw1:i386 (0.183-1) ...
Setting up libxdmcp6:i386 (1:1.1.2-3) ...
Setting up libvulkan-dev:i386 (1.2.162.0-1) ...
Setting up libxcb1:i386 (1.14-3) ...
Setting up gettext (0.21-4) ...
Setting up libgsl-dev (2.6+dfsg-2) ...
Setting up libxcb-xfixes0:i386 (1.14-3) ...
Setting up libzmq5:i386 (4.3.4-1) ...
Setting up libpdfbox-java (1:1.8.16-2) ...
Setting up libxau-dev:i386 (1:1.0.9-1) ...
Setting up qt5-qmake:i386 (5.15.2+dfsg-9) ...
Setting up libxcb-xinput0:i386 (1.14-3) ...
Setting up libwoff1:i386 (1.0.2-1+b1) ...
Setting up libice-dev:i386 (2:1.0.10-1) ...
Setting up libtool (2.4.6-15) ...
Setting up libarchive13:i386 (3.4.3-2+deb11u1) ...
Setting up libxcb-render0:i386 (1.14-3) ...
Setting up libfftw3-bin (3.3.8-2) ...
Setting up libboost-math-dev:i386 (1.74.0.3) ...
Setting up libxcb-glx0:i386 (1.14-3) ...
Setting up libwebpdemux2:i386 (0.6.1-2.1+deb11u2) ...
Setting up libedit2:i386 (3.1-20191231-2+b1) ...
Setting up libreadline8:i386 (8.1-1) ...
Setting up libboost-system-dev:i386 (1.74.0.3) ...
Setting up libcommons-parent-java (43-1) ...
Setting up libxcb-keysyms1:i386 (0.4.0-1+b2) ...
Setting up libxcb-shape0:i386 (1.14-3) ...
Setting up libavahi-common3:i386 (0.8-5+deb11u2) ...
Setting up libx265-192:i386 (3.4-2) ...
Setting up libcommons-logging-java (1.2-2) ...
Setting up libldap-2.4-2:i386 (2.4.57+dfsg-3+deb11u1) ...
Setting up m4 (1.4.18-5) ...
Setting up libxcb-render-util0:i386 (0.3.9-1+b1) ...
Setting up libnss3:i386 (2:3.61-1+deb11u3) ...
Setting up libxcb-shm0:i386 (1.14-3) ...
Setting up libxcb-icccm4:i386 (0.4.1-1.1) ...
Setting up tidy (2:5.6.0-11) ...
Setting up libxcb-util1:i386 (0.4.0-1+b1) ...
Setting up libxcb-xkb1:i386 (1.14-3) ...
Setting up libxcb-image0:i386 (0.4.0-1+b3) ...
Setting up intltool-debian (0.35.0+20060710.5) ...
Setting up libxcb-present0:i386 (1.14-3) ...
Setting up libthai0:i386 (0.1.28-3) ...
Setting up libvorbisfile3:i386 (1.3.7-1) ...
Setting up libxdmcp-dev:i386 (1:1.1.2-3) ...
Setting up libxcb-xinerama0:i386 (1.14-3) ...
Setting up libllvm11:i386 (1:11.0.1-2) ...
Setting up libptexenc1:i386 (2020.20200327.54578-7+deb11u1) ...
Setting up libfreetype6:i386 (2.10.4+dfsg-1+deb11u1) ...
Setting up libxcb-sync1:i386 (1.14-3) ...
Setting up shared-mime-info (2.0-1) ...
Setting up libxkbcommon-x11-0:i386 (1.0.3-2) ...
Setting up libeigen3-dev (3.3.9-2) ...
Setting up libclang1-11 (1:11.0.1-2) ...
Setting up ucf (3.0043) ...
Setting up libqt5core5a:i386 (5.15.2+dfsg-9) ...
Setting up libjs-sphinxdoc (3.4.3-2) ...
Setting up autoconf (2.69-14) ...
Setting up libboost-serialization1.74-dev:i386 (1.74.0-9) ...
Setting up libxcb-dri2-0:i386 (1.14-3) ...
Setting up dh-strip-nondeterminism (1.12.0-1) ...
Setting up libgvpr2:i386 (2.42.2-5) ...
Setting up x11proto-xext-dev (2020.1-1) ...
Setting up libdrm2:i386 (2.4.104-1) ...
Setting up dwz (0.13+20210201-1) ...
Setting up libboost-regex1.74-dev:i386 (1.74.0-9) ...
Setting up libva-drm2:i386 (2.10.0-1) ...
Setting up groff-base (1.22.4-6) ...
Setting up libqt5dbus5:i386 (5.15.2+dfsg-9) ...
Setting up libxcb-randr0:i386 (1.14-3) ...
Setting up procps (2:3.3.17-5) ...
Setting up libxslt1.1:i386 (1.1.34-4+deb11u1) ...
Setting up bison (2:3.7.5+dfsg-1) ...
update-alternatives: using /usr/bin/bison.yacc to provide /usr/bin/yacc (yacc) in auto mode
Setting up libcurl4:i386 (7.74.0-1.3+deb11u9) ...
Setting up libx11-6:i386 (2:1.7.2-1+deb11u1) ...
Setting up libharfbuzz0b:i386 (2.7.4-1) ...
Setting up libgdk-pixbuf-2.0-0:i386 (2.42.2+dfsg-1+deb11u1) ...
Setting up libqt5sensors5:i386 (5.15.2-2) ...
Setting up libqt5test5:i386 (5.15.2+dfsg-9) ...
Setting up libboost-regex-dev:i386 (1.74.0.3) ...
Setting up libwacom2:i386 (1.8-2) ...
Setting up libxcomposite1:i386 (1:0.4.5-1) ...
Setting up libsm6:i386 (2:1.2.3-1) ...
Setting up libfftw3-dev:i386 (3.3.8-2) ...
Setting up libqt5concurrent5:i386 (5.15.2+dfsg-9) ...
Setting up libopenmpt0:i386 (0.4.11-1) ...
Setting up libavahi-client3:i386 (0.8-5+deb11u2) ...
Setting up libgstreamer1.0-0:i386 (1.18.4-2.1) ...
Setcap worked! gst-ptp-helper is not suid!
Setting up libpython3.9-stdlib:i386 (3.9.2-1) ...
Setting up libpython3-stdlib:i386 (3.9.2-3) ...
Setting up libdrm-amdgpu1:i386 (2.4.104-1) ...
Setting up automake (1:1.16.3-2) ...
update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode
Setting up libxcb-dri3-0:i386 (1.14-3) ...
Setting up libpaper1:i386 (1.1.28+b1) ...

Creating config file /etc/papersize with new version
Setting up libx11-xcb1:i386 (2:1.7.2-1+deb11u1) ...
Setting up flex (2.6.4-8) ...
Setting up libdrm-nouveau2:i386 (2.4.104-1) ...
Setting up libxdamage1:i386 (1:1.1.5-2) ...
Setting up libxcb1-dev:i386 (1.14-3) ...
Setting up libxpm4:i386 (1:3.5.12-1.1~deb11u1) ...
Setting up libxrender1:i386 (1:0.9.10-1) ...
Setting up libgbm1:i386 (20.3.5-1) ...
Setting up libsm-dev:i386 (2:1.2.3-1) ...
Setting up libdrm-radeon1:i386 (2.4.104-1) ...
Setting up fontconfig-config (2.13.1-4.2) ...
Setting up qdoc-qt5 (5.15.2-5) ...
Setting up po-debconf (1.0.21+nmu1) ...
Setting up libqt5positioning5:i386 (5.15.2+dfsg-2) ...
Setting up libdrm-intel1:i386 (2.4.104-1) ...
Setting up libgl1-mesa-dri:i386 (20.3.5-1) ...
Setting up libx11-dev:i386 (2:1.7.2-1+deb11u1) ...
Setting up libxext6:i386 (2:1.3.3-1.1) ...
Setting up libgstreamer-plugins-base1.0-0:i386 (1.18.4-2+deb11u1) ...
Setting up libpaper-utils (1.1.28+b1) ...
Setting up man-db (2.9.4-2) ...
Not building database; man-db/auto-update is not 'true'.
Setting up libqt5network5:i386 (5.15.2+dfsg-9) ...
Setting up libxxf86vm1:i386 (1:1.1.4-1+b2) ...
Setting up libinput-bin (1.16.4-3) ...
Setting up libclang-cpp11 (1:11.0.1-2) ...
Setting up libqt5sql5:i386 (5.15.2+dfsg-9) ...
Setting up libboost-iostreams1.74-dev:i386 (1.74.0-9) ...
Setting up dh-autoreconf (20) ...
Setting up tex-common (6.16) ...
update-language: texlive-base not installed and configured, doing nothing!
Setting up libboost-date-time1.74-dev:i386 (1.74.0-9) ...
Setting up qtbase5-dev-tools (5.15.2+dfsg-9) ...
Setting up libqt5xml5:i386 (5.15.2+dfsg-9) ...
Setting up libegl-mesa0:i386 (20.3.5-1) ...
Setting up doxygen (1.9.1-1) ...
Setting up libpython3.9:i386 (3.9.2-1) ...
Setting up libxfixes3:i386 (1:5.0.3-2) ...
Setting up libqt5qml5:i386 (5.15.2+dfsg-6) ...
Setting up qtattributionsscanner-qt5 (5.15.2-5) ...
Setting up libxrandr2:i386 (2:1.5.1-1) ...
Setting up libqt5webchannel5:i386 (5.15.2-2) ...
Setting up libxt6:i386 (1:1.2.0-1) ...
Setting up libxext-dev:i386 (2:1.3.3-1.1) ...
Setting up libcups2:i386 (2.3.3op2-3+deb11u6) ...
Setting up libvdpau1:i386 (1.4-3) ...
Setting up libegl1:i386 (1.3.2-1) ...
Setting up cmake (3.18.4-2+deb11u1) ...
Setting up libboost-thread1.74-dev:i386 (1.74.0-9) ...
Setting up libqt5positioning5-plugins:i386 (5.15.2+dfsg-2) ...
Setting up libxss1:i386 (1:1.2.3-1) ...
Setting up libfontconfig1:i386 (2.13.1-4.2) ...
Setting up libbluray2:i386 (1:1.2.1-4+deb11u2) ...
Setting up libva-x11-2:i386 (2.10.0-1) ...
Setting up libxrender-dev:i386 (1:0.9.10-1) ...
Setting up python3.9 (3.9.2-1) ...
Setting up libboost-thread-dev:i386 (1.74.0.3) ...
Setting up libinput10:i386 (1.16.4-3) ...
Setting up fontconfig (2.13.1-4.2) ...
Regenerating fonts cache... done.
Setting up libxmu-headers (2:1.1.2-2) ...
Setting up libxmu6:i386 (2:1.1.2-2+b3) ...
Setting up libqt5qmlmodels5:i386 (5.15.2+dfsg-6) ...
Setting up libglx-mesa0:i386 (20.3.5-1) ...
Setting up libqt5sql5-sqlite:i386 (5.15.2+dfsg-9) ...
Setting up libgs9:i386 (9.53.3~dfsg-7+deb11u6) ...
Setting up libxi6:i386 (2:1.7.10-1) ...
Setting up libglx0:i386 (1.3.2-1) ...
Setting up preview-latex-style (12.2-1) ...
Setting up libxcursor1:i386 (1:1.2.0-2) ...
Setting up libpango-1.0-0:i386 (1.46.2-3) ...
Setting up libpython3.9-dev:i386 (3.9.2-1) ...
Setting up debhelper (13.3.4) ...
Setting up python3 (3.9.2-3) ...
Setting up libxaw7:i386 (2:1.0.13-1.1) ...
Setting up libboost-iostreams-dev:i386 (1.74.0.3) ...
Setting up ghostscript (9.53.3~dfsg-7+deb11u6) ...
Setting up libcairo2:i386 (1.16.0-5) ...
Setting up libavutil56:i386 (7:4.3.6-0+deb11u1) ...
Setting up libqt5qmlworkerscript5:i386 (5.15.2+dfsg-6) ...
Setting up libgl1:i386 (1.3.2-1) ...
Setting up libxt-dev:i386 (1:1.2.0-1) ...
Setting up libgd3:i386 (2.3.0-2) ...
Setting up python3.9-dev (3.9.2-1) ...
Setting up libglew2.1:i386 (2.1.0-4+b1) ...
Setting up texlive-binaries (2020.20200327.54578-7+deb11u1) ...
update-alternatives: using /usr/bin/xdvi-xaw to provide /usr/bin/xdvi.bin (xdvi.bin) in auto mode
update-alternatives: using /usr/bin/bibtex.original to provide /usr/bin/bibtex (bibtex) in auto mode
Setting up libtheora0:i386 (1.1.1+dfsg.1-15) ...
Setting up libglx-dev:i386 (1.3.2-1) ...
Setting up libcairo-gobject2:i386 (1.16.0-5) ...
Setting up libglu1-mesa:i386 (9.0.1-1) ...
Setting up libpangoft2-1.0-0:i386 (1.46.2-3) ...
Setting up python3-lib2to3 (3.9.2-1) ...
Setting up texlive-base (2020.20210202-3) ...
tl-paper: setting paper size for dvips to a4: /var/lib/texmf/dvips/config/config-paper.ps
tl-paper: setting paper size for dvipdfmx to a4: /var/lib/texmf/dvipdfmx/dvipdfmx-paper.cfg
tl-paper: setting paper size for xdvi to a4: /var/lib/texmf/xdvi/XDvi-paper
tl-paper: setting paper size for pdftex to a4: /var/lib/texmf/tex/generic/tex-ini-files/pdftexconfig.tex
Setting up libgl-dev:i386 (1.3.2-1) ...
Setting up libpangocairo-1.0-0:i386 (1.46.2-3) ...
Setting up python3-sip (4.19.25+dfsg-1) ...
Setting up python3-distutils (3.9.2-1) ...
Setting up dh-python (4.20201102+nmu1) ...
Setting up libpython3-dev:i386 (3.9.2-3) ...
Setting up libegl-dev:i386 (1.3.2-1) ...
Setting up libqt5gui5:i386 (5.15.2+dfsg-9) ...
Setting up libqt5widgets5:i386 (5.15.2+dfsg-9) ...
Setting up libswresample3:i386 (7:4.3.6-0+deb11u1) ...
Setting up libxmu-dev:i386 (2:1.1.2-2+b3) ...
Setting up libqt5help5:i386 (5.15.2-5) ...
Setting up librsvg2-2:i386 (2.50.3+dfsg-1+deb11u1) ...
Setting up libqt5printsupport5:i386 (5.15.2+dfsg-9) ...
Setting up texlive-latex-base (2020.20210202-3) ...
Setting up python3-dev (3.9.2-3) ...
Setting up texlive-latex-recommended (2020.20210202-3) ...
Setting up libglu1-mesa-dev:i386 (9.0.1-1) ...
Setting up libgvc6 (2.42.2-5) ...
Setting up texlive-pictures (2020.20210202-3) ...
Setting up qtbase5-dev:i386 (5.15.2+dfsg-9) ...
Setting up libqt5opengl5:i386 (5.15.2+dfsg-9) ...
Setting up texlive-fonts-recommended (2020.20210202-3) ...
Setting up libavcodec58:i386 (7:4.3.6-0+deb11u1) ...
Setting up libqt5quick5:i386 (5.15.2+dfsg-6) ...
Setting up libchromaprint1:i386 (1.5.0-2) ...
Setting up graphviz (2.42.2-5) ...
Setting up libqt5quickshapes5:i386 (5.15.2+dfsg-6) ...
Setting up libqt5quicktest5:i386 (5.15.2+dfsg-6) ...
Setting up libqt5positioningquick5:i386 (5.15.2+dfsg-2) ...
Setting up libqt5designer5:i386 (5.15.2-5) ...
Setting up libqt5opengl5-dev:i386 (5.15.2+dfsg-9) ...
Setting up libavformat58:i386 (7:4.3.6-0+deb11u1) ...
Setting up qtdeclarative5-dev-tools (5.15.2+dfsg-6) ...
Setting up python3-sip-dev (4.19.25+dfsg-1) ...
Setting up qhelpgenerator-qt5 (5.15.2-5) ...
Setting up texlive-latex-extra (2020.20210202-3) ...
Setting up libqt5webkit5:i386 (5.212.0~alpha4-11) ...
Setting up libqt5designercomponents5:i386 (5.15.2-5) ...
Setting up qt5-qmltooling-plugins:i386 (5.15.2+dfsg-6) ...
Setting up libqt5quickwidgets5:i386 (5.15.2+dfsg-6) ...
Setting up libglew-dev:i386 (2.1.0-4+b1) ...
Setting up qt5-assistant (5.15.2-5) ...
Setting up qttools5-dev-tools (5.15.2-5) ...
Setting up libqt5webenginecore5:i386 (5.15.2+dfsg-3) ...
Setting up libqt5quickparticles5:i386 (5.15.2+dfsg-6) ...
Setting up libqt5webengine5:i386 (5.15.2+dfsg-3) ...
Setting up qttools5-dev:i386 (5.15.2-5) ...
Setting up libqt5webenginewidgets5:i386 (5.15.2+dfsg-3) ...
Setting up qtdeclarative5-dev:i386 (5.15.2+dfsg-6) ...
Setting up qtpositioning5-dev:i386 (5.15.2+dfsg-2) ...
Setting up libqt5webchannel5-dev:i386 (5.15.2-2) ...
Setting up qtwebengine5-dev:i386 (5.15.2+dfsg-3) ...
Processing triggers for libc-bin (2.31-13+deb11u6) ...
Processing triggers for tex-common (6.16) ...
Running updmap-sys. This may take some time... done.
Running mktexlsr /var/lib/texmf ... done.
Building format(s) --all.
	This may take some time... done.
Reading package lists...
Building dependency tree...
Reading state information...
Reading extended state information...
Initializing package states...
Writing extended state information...
Building tag database...
 -> Finished parsing the build-deps
Reading package lists...
Building dependency tree...
Reading state information...
fakeroot is already the newest version (1.25.3-1.1).
0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
I: Building the package
I: user script /srv/workspace/pbuilder/40411/tmp/hooks/A99_set_merged_usr starting
Not re-configuring usrmerge for bullseye
I: user script /srv/workspace/pbuilder/40411/tmp/hooks/A99_set_merged_usr finished
hostname: Name or service not known
I: Running cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S  > ../ball_1.5.0+git20180813.37fc53c-6_source.changes
dpkg-buildpackage: info: source package ball
dpkg-buildpackage: info: source version 1.5.0+git20180813.37fc53c-6
dpkg-buildpackage: info: source distribution unstable
dpkg-buildpackage: info: source changed by Andreas Tille <tille@debian.org>
 dpkg-source --before-build .
dpkg-buildpackage: info: host architecture i386
 fakeroot debian/rules clean
dh clean --buildsystem=cmake --builddirectory=build --with python3
   debian/rules override_dh_auto_clean
make[1]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c'
[ -d source ] && cd source ; \
if [ -f Makefile ] ; \
then  \
	make clean ; \
	cd PYTHON/EXTENSIONS; \
	make clean; \
	rm -rf ../lib/Linux*; \
	rm -rf ../doc/doxygen/latex/*; \
	rm -f /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/config.status 2>/dev/null; \
fi
rm -f data/BALLView/translations/BALLView.de_DE.qm
rm -f data/BALLView/translations/BALLView.zh_TW.qm
rm -f doc/TUTORIAL/*.aux
rm -rf build
find . -name "*.o" | xargs -r rm
find . -type l | xargs -r rm
find doc/TUTORIAL/ -name "tutorial.*" | egrep -v ".(tex|bib)$" |xargs -r rm
rm -f include/BALL/BALL.doc
# find . -name "*.doc" -delete
# Remove self-create UI header file
rm -f include/BALL/VIEW/UIC/ui_assignBondOrderConfigurationDialog.h \
      include/BALL/VIEW/UIC/ui_assignBondOrderResultsDialog.h \
      include/BALL/VIEW/UIC/ui_atomOverview.h
make[1]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c'
   dh_autoreconf_clean -O--buildsystem=cmake -O--builddirectory=build
   dh_clean -O--buildsystem=cmake -O--builddirectory=build
	rm -f debian/debhelper-build-stamp
	rm -rf debian/.debhelper/
	rm -f -- debian/libball1.5-data.substvars debian/libball1.5.substvars debian/libball1.5-dev.substvars debian/libballview1.5.substvars debian/libballview1.5-dev.substvars debian/python3-ball.substvars debian/ballview.substvars debian/libball1.5-doc.substvars debian/files
	rm -fr -- debian/libball1.5-data/ debian/tmp/ debian/libball1.5/ debian/libball1.5-dev/ debian/libballview1.5/ debian/libballview1.5-dev/ debian/python3-ball/ debian/ballview/ debian/libball1.5-doc/
	find .  \( \( \
		\( -path .\*/.git -o -path .\*/.svn -o -path .\*/.bzr -o -path .\*/.hg -o -path .\*/CVS -o -path .\*/.pc -o -path .\*/_darcs \) -prune -o -type f -a \
	        \( -name '#*#' -o -name '.*~' -o -name '*~' -o -name DEADJOE \
		 -o -name '*.orig' -o -name '*.rej' -o -name '*.bak' \
		 -o -name '.*.orig' -o -name .*.rej -o -name '.SUMS' \
		 -o -name TAGS -o \( -path '*/.deps/*' -a -name '*.P' \) \
		\) -exec rm -f {} + \) -o \
		\( -type d -a -name autom4te.cache -prune -exec rm -rf {} + \) \)
 debian/rules build
dh build --buildsystem=cmake --builddirectory=build --with python3
   dh_update_autotools_config -O--buildsystem=cmake -O--builddirectory=build
   dh_autoreconf -O--buildsystem=cmake -O--builddirectory=build
   debian/rules override_dh_auto_configure
make[1]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c'
mkdir -p build
cd build && LDFLAGS="-Wl,-z,relro -Wl,-z,now" CXXFLAGS="-g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security" CFLAGS="-g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security" CPPFLAGS="-Wdate-time -D_FORTIFY_SOURCE=2" \
            cmake .. -DCMAKE_SOURCE_DIR=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c -DCMAKE_INSTALL_PREFIX=./usr \
	    -DBALL_PATH=/usr -DBALL_DATA_PATH=/usr/share/BALL-1.5/data \
	    -DCMAKE_VERBOSE_MAKEFILE=ON
CMake Deprecation Warning at CMakeLists.txt:10 (CMAKE_POLICY):
  The OLD behavior for policy CMP0042 will be removed from a future version
  of CMake.

  The cmake-policies(7) manual explains that the OLD behaviors of all
  policies are deprecated and that a policy should be set to OLD only under
  specific short-term circumstances.  Projects should be ported to the NEW
  behavior and not rely on setting a policy to OLD.


-- The C compiler identification is GNU 10.2.1
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-- Performing Test BALL_HAS_NOEXCEPT
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-- Performing Test BALL_HAS_STD_STRING_CONST_ITERATOR_FUNCTIONS
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-- Looking for vsnprintf
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-- [GCC only] STL debug mode: OFF
-- Found BISON: /usr/bin/bison  
-- Found FLEX: /usr/bin/flex  
-- Checking for yylex_destroy support in flex
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-- Found Boost: /usr/lib/i386-linux-gnu/cmake/Boost-1.74.0/BoostConfig.cmake (found suitable version "1.74.0", minimum required is "1.55") found components: chrono date_time iostreams regex serialization system thread 
-- Could NOT find LPSolve (missing: LPSOLVE_LIBRARIES LPSOLVE_INCLUDE_PATH LPSOLVE_LINKS) 
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  problems in calling code that expects `find_package` result variables
  (e.g., `_FOUND`) to follow a certain pattern.
Call Stack (most recent call first):
  cmake/FindlibSVM.cmake:165 (find_package_handle_standard_args)
  CMakeLists.txt:196 (FIND_PACKAGE)
This warning is for project developers.  Use -Wno-dev to suppress it.

-- Could NOT find LibSVM (missing: LIBSVM_LIBRARY LIBSVM_INCLUDE_DIR LIBSVM_INCLUDE_DIRS LIBSVM_ROOT_DIR) 
-- [Warning] FindTBB.cmake: The use of TBB_ARCHITECTURE and TBB_COMPILER is deprecated and may not be supported in future versions. Please set  (using tbbvars.[bat|csh|sh]).
-- Looked for Threading Building Blocks in /opt/intel/tbb;/usr/local/include;/usr/include;/usr
-- Intel Threading Building Blocks not found!
-- Could NOT find MPI_C (missing: MPI_C_LIB_NAMES MPI_C_HEADER_DIR MPI_C_WORKS) 
-- Could NOT find MPI_CXX (missing: MPI_CXX_LIB_NAMES MPI_CXX_HEADER_DIR MPI_CXX_WORKS) 
-- Could NOT find MPI (missing: MPI_C_FOUND MPI_CXX_FOUND) 
    Reason given by package: MPI component 'Fortran' was requested, but language Fortran is not enabled.  

-- Found Eigen3: /usr/include/eigen3 (Required is at least version "2.91.0") 
-- Found OpenGL: /usr/lib/i386-linux-gnu/libGL.so   
-- Found GLEW: /usr/include (found version "2.1.0") 
-- Could not find RTfact header file (RTpie/IRayTracer.hpp)! Real time ray tracing will be disabled!
-- Found PythonInterp: /usr/bin/python3 (found suitable version "3.9.2", minimum required is "3") 
-- Found PythonLibs: /usr/lib/i386-linux-gnu/libpython3.9.so (found suitable version "3.9.2", minimum required is "3") 
-- Found SIP version: 4.19.25
-- Could NOT find SIP (missing: SIP_LIBRARIES) (Required is at least version "4.8")
-- Disabling python support.
-- Setting CTDSchema version to its default value (v1.7)
-- Setting CTDConverter version to its default value (v2.0)
-- Could not find SpaceNavigator libraries. Disabling the SpaceNavigator plugin
-- Could not find VRPN libraries. Disabling the VRPN plugin
-- Could not find VRPN libraries. Disabling the VRPNHD plugin
-- Python support has not been enabled. Disabling the Jupyter plugin.
-- Found Doxygen: /usr/bin/doxygen (found version "1.9.1") found components: doxygen dot 
-- Found LATEX: /usr/bin/latex   
-- 
-- -----------------------------------------------------------------
-- 
-- You have successfully configured BALL.
-- 
-- For a full list of make targets execute:
-- 'make targets'
-- 
-- -----------------------------------------------------------------
-- 
-- Configuring done
-- Generating done
-- Build files have been written to: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build
make[1]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c'
   debian/rules override_dh_auto_build-arch
make[1]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c'
## Fix upstream issue of missing UI files
## ...
## Uhmmm, seems we need to do this for all UI files mentioned in
##   source/VIEW/DIALOGS/sources.cmake
## but I really hope some cmake expert might be able to find a clue
## how to trigger cmake to do it as intended by upstream.
## Somehow the code
##   ADD_BALL_UIFILES("VIEW/DIALOGS" "")
## needs to be called before the build code below can be started
make -C build BALL VIEW BALLView build_tests install
make[2]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
/usr/bin/cmake -S/build/reproducible-path/ball-1.5.0+git20180813.37fc53c -B/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build --check-build-system CMakeFiles/Makefile.cmake 0
make  -f CMakeFiles/Makefile2 BALL
make[3]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
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/usr/bin/cmake -E cmake_progress_start /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/CMakeFiles 21
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make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/CMakeFiles/BALL_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target BALL_autogen
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make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[  0%] [BISON][smilesParserParser] Building parser with bison 3.7.5
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c && /usr/bin/bison --defines=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/STRUCTURE/smilesParserParser.h -pSmilesParser -d -o /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/STRUCTURE/smilesParserParser.C source/STRUCTURE/smilesParserParser.y
[  0%] [FLEX][CIFParserLexer] Building scanner with flex 2.6.4
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c && /usr/bin/flex -PCIFParser -o/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/FORMAT/CIFParserLexer.C source/FORMAT/CIFParserLexer.l
[  0%] [BISON][CIFParserParser] Building parser with bison 3.7.5
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c && /usr/bin/bison --defines=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/FORMAT/CIFParserParser.h -pCIFParser -d -o /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/FORMAT/CIFParserParser.C source/FORMAT/CIFParserParser.y
source/FORMAT/CIFParserParser.y: warning: 5 shift/reduce conflicts [-Wconflicts-sr]
source/FORMAT/CIFParserParser.y: note: rerun with option '-Wcounterexamples' to generate conflict counterexamples
[  0%] [FLEX][GAMESSDatParserLexer] Building scanner with flex 2.6.4
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c && /usr/bin/flex -PGAMESSDatParser -o/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/FORMAT/GAMESSDatParserLexer.C source/FORMAT/GAMESSDatParserLexer.l
[  0%] [BISON][GAMESSDatParserParser] Building parser with bison 3.7.5
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c && /usr/bin/bison --defines=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/FORMAT/GAMESSDatParserParser.h -pGAMESSDatParser -d -o /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/FORMAT/GAMESSDatParserParser.C source/FORMAT/GAMESSDatParserParser.y
source/FORMAT/GAMESSDatParserParser.y: warning: 3 shift/reduce conflicts [-Wconflicts-sr]
source/FORMAT/GAMESSDatParserParser.y: note: rerun with option '-Wcounterexamples' to generate conflict counterexamples
[  0%] [FLEX][expressionParserLexer] Building scanner with flex 2.6.4
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c && /usr/bin/flex -PExpressionParser -o/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/KERNEL/expressionParserLexer.C source/KERNEL/expressionParserLexer.l
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cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c && /usr/bin/bison --defines=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/KERNEL/expressionParserParser.h -pExpressionParser -d -o /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/KERNEL/expressionParserParser.C source/KERNEL/expressionParserParser.y
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cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c && /usr/bin/flex -PParsedFunction -o/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/MATHS/parsedFunctionLexer.C source/MATHS/parsedFunctionLexer.l
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cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c && /usr/bin/bison --defines=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/MATHS/parsedFunctionParser.h -pParsedFunction -d -o /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/MATHS/parsedFunctionParser.C source/MATHS/parsedFunctionParser.y
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cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c && /usr/bin/flex -PGAFFCESParser -o/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/MOLMEC/AMBER/GAFFCESParserLexer.C source/MOLMEC/AMBER/GAFFCESParserLexer.l
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cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c && /usr/bin/bison --defines=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/MOLMEC/AMBER/GAFFCESParserParser.h -pGAFFCESParser -d -o /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/MOLMEC/AMBER/GAFFCESParserParser.C source/MOLMEC/AMBER/GAFFCESParserParser.y
[  4%] [FLEX][smartsParserLexer] Building scanner with flex 2.6.4
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c && /usr/bin/flex -PSmartsParser -o/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/STRUCTURE/smartsParserLexer.C source/STRUCTURE/smartsParserLexer.l
[  4%] [BISON][smartsParserParser] Building parser with bison 3.7.5
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c && /usr/bin/bison --defines=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/STRUCTURE/smartsParserParser.h -pSmartsParser -d -o /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/STRUCTURE/smartsParserParser.C source/STRUCTURE/smartsParserParser.y
source/STRUCTURE/smartsParserParser.y: warning: 26 shift/reduce conflicts [-Wconflicts-sr]
source/STRUCTURE/smartsParserParser.y: note: rerun with option '-Wcounterexamples' to generate conflict counterexamples
[  4%] [FLEX][smilesParserLexer] Building scanner with flex 2.6.4
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c && /usr/bin/flex -PSmilesParser -o/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/STRUCTURE/smilesParserLexer.C source/STRUCTURE/smilesParserLexer.l
[  4%] Automatic MOC for target BALL
/usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/CMakeFiles/BALL_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
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make  -f CMakeFiles/BALL.dir/build.make CMakeFiles/BALL.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/CMakeFiles/BALL.dir/DependInfo.cmake --color=
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[  4%] Building CXX object CMakeFiles/BALL.dir/BALL_autogen/mocs_compilation.cpp.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/BALL_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/mocs_compilation.cpp
[  4%] Building CXX object CMakeFiles/BALL.dir/source/CONCEPT/autoDeletable.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/CONCEPT/autoDeletable.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/CONCEPT/autoDeletable.C
[  4%] Building CXX object CMakeFiles/BALL.dir/source/CONCEPT/client.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/CONCEPT/client.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/CONCEPT/client.C
[  4%] Building CXX object CMakeFiles/BALL.dir/source/CONCEPT/composite.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/CONCEPT/composite.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/CONCEPT/composite.C
[  4%] Building CXX object CMakeFiles/BALL.dir/source/CONCEPT/embeddable.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/CONCEPT/embeddable.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/CONCEPT/embeddable.C
[  4%] Building CXX object CMakeFiles/BALL.dir/source/CONCEPT/enumerator.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/CONCEPT/enumerator.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/CONCEPT/enumerator.C
[  4%] Building CXX object CMakeFiles/BALL.dir/source/CONCEPT/factory.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/CONCEPT/factory.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/CONCEPT/factory.C
[  4%] Building CXX object CMakeFiles/BALL.dir/source/CONCEPT/object.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/CONCEPT/object.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/CONCEPT/object.C
[  4%] Building CXX object CMakeFiles/BALL.dir/source/CONCEPT/objectCreator.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/CONCEPT/objectCreator.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/CONCEPT/objectCreator.C
[  4%] Building CXX object CMakeFiles/BALL.dir/source/CONCEPT/moleculeObjectCreator.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/CONCEPT/moleculeObjectCreator.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/CONCEPT/moleculeObjectCreator.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/CONCEPT/moleculeObjectCreator.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/objectCreator.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/moleculeObjectCreator.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/CONCEPT/moleculeObjectCreator.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/CONCEPT/moleculeObjectCreator.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/objectCreator.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/moleculeObjectCreator.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/CONCEPT/moleculeObjectCreator.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/CONCEPT/moleculeObjectCreator.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/objectCreator.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/moleculeObjectCreator.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/CONCEPT/moleculeObjectCreator.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/CONCEPT/moleculeObjectCreator.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/CONCEPT/moleculeObjectCreator.C: In member function 'virtual BALL::Composite* BALL::MoleculeObjectCreator::convertObject(BALL::PersistentObject&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:108:49: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  108 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/CONCEPT/moleculeObjectCreator.C:89:4: note: in expansion of macro 'BALL_FOREACH_BOND'
   89 |    BALL_FOREACH_BOND(*p, atom_it, bond_it)
      |    ^~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/objectCreator.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/moleculeObjectCreator.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/CONCEPT/moleculeObjectCreator.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/CONCEPT/moleculeObjectCreator.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/CONCEPT/moleculeObjectCreator.C: In member function 'virtual BALL::Composite* BALL::MoleculeObjectCreator::convertObject(BALL::PersistentObject&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:108:49: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' first required here
  108 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/CONCEPT/moleculeObjectCreator.C:89:4: note: in expansion of macro 'BALL_FOREACH_BOND'
   89 |    BALL_FOREACH_BOND(*p, atom_it, bond_it)
      |    ^~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:110:51: warning: implicitly-declared 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  110 |   for (bond_iterator = (*atom_iterator).beginBond(); \
      |                                                   ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/CONCEPT/moleculeObjectCreator.C:89:4: note: in expansion of macro 'BALL_FOREACH_BOND'
   89 |    BALL_FOREACH_BOND(*p, atom_it, bond_it)
      |    ^~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/CONCEPT/moleculeObjectCreator.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:437:15: note: because 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::RandomAccessIterator<Container, DataType, Position, Traits>::RandomAccessIterator(const BALL::RandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
  437 |   BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:413:8: warning: implicitly-declared 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  413 |  class RandomAccessIterator
      |        ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:47:15: note: because 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   47 |   BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:24:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   24 |  class ConstRandomAccessIterator
      |        ^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/objectCreator.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/moleculeObjectCreator.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/CONCEPT/moleculeObjectCreator.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/CONCEPT/moleculeObjectCreator.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:413:8: note: synthesized method 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' first required here
  413 |  class RandomAccessIterator
      |        ^~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/CONCEPT/moleculeObjectCreator.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/CONCEPT/moleculeObjectCreator.C: In member function 'virtual BALL::Composite* BALL::MoleculeObjectCreator::convertObject(BALL::PersistentObject&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:110:51: note: synthesized method 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' first required here
  110 |   for (bond_iterator = (*atom_iterator).beginBond(); \
      |                                                   ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/CONCEPT/moleculeObjectCreator.C:89:4: note: in expansion of macro 'BALL_FOREACH_BOND'
   89 |    BALL_FOREACH_BOND(*p, atom_it, bond_it)
      |    ^~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:108:49: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  108 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/CONCEPT/moleculeObjectCreator.C:108:4: note: in expansion of macro 'BALL_FOREACH_BOND'
  108 |    BALL_FOREACH_BOND(*s, atom_it, bond_it)
      |    ^~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/objectCreator.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/moleculeObjectCreator.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/CONCEPT/moleculeObjectCreator.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/CONCEPT/moleculeObjectCreator.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:110:51: warning: implicitly-declared 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  110 |   for (bond_iterator = (*atom_iterator).beginBond(); \
      |                                                   ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/CONCEPT/moleculeObjectCreator.C:108:4: note: in expansion of macro 'BALL_FOREACH_BOND'
  108 |    BALL_FOREACH_BOND(*s, atom_it, bond_it)
      |    ^~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/CONCEPT/moleculeObjectCreator.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:437:15: note: because 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::RandomAccessIterator<Container, DataType, Position, Traits>::RandomAccessIterator(const BALL::RandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
  437 |   BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~
[  4%] Building CXX object CMakeFiles/BALL.dir/source/CONCEPT/persistenceManager.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/CONCEPT/persistenceManager.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/CONCEPT/persistenceManager.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/CONCEPT/persistenceManager.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/CONCEPT/persistenceManager.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/CONCEPT/persistenceManager.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/CONCEPT/persistenceManager.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/CONCEPT/persistenceManager.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/CONCEPT/persistenceManager.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[  4%] Building CXX object CMakeFiles/BALL.dir/source/CONCEPT/preferencesObject.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/CONCEPT/preferencesObject.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/CONCEPT/preferencesObject.C
[  4%] Building CXX object CMakeFiles/BALL.dir/source/CONCEPT/processor.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/CONCEPT/processor.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/CONCEPT/processor.C
[  4%] Building CXX object CMakeFiles/BALL.dir/source/CONCEPT/property.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/CONCEPT/property.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/CONCEPT/property.C
[  9%] Building CXX object CMakeFiles/BALL.dir/source/CONCEPT/selectable.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/CONCEPT/selectable.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/CONCEPT/selectable.C
[  9%] Building CXX object CMakeFiles/BALL.dir/source/CONCEPT/textPersistenceManager.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/CONCEPT/textPersistenceManager.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/CONCEPT/textPersistenceManager.C
[  9%] Building CXX object CMakeFiles/BALL.dir/source/CONCEPT/timeStamp.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/CONCEPT/timeStamp.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/CONCEPT/timeStamp.C
[  9%] Building CXX object CMakeFiles/BALL.dir/source/CONCEPT/visitor.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/CONCEPT/visitor.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/CONCEPT/visitor.C
[  9%] Building CXX object CMakeFiles/BALL.dir/source/CONCEPT/molecularInformation.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/CONCEPT/molecularInformation.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/CONCEPT/molecularInformation.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/CONCEPT/molecularInformation.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/molecularInformation.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/CONCEPT/molecularInformation.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/CONCEPT/molecularInformation.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/molecularInformation.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/CONCEPT/molecularInformation.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/CONCEPT/molecularInformation.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/molecularInformation.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/CONCEPT/molecularInformation.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[  9%] Building CXX object CMakeFiles/BALL.dir/source/CONCEPT/XDRPersistenceManager.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/CONCEPT/XDRPersistenceManager.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/CONCEPT/XDRPersistenceManager.C
[  9%] Building CXX object CMakeFiles/BALL.dir/source/COMMON/constants.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/COMMON/constants.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/COMMON/constants.C
[  9%] Building CXX object CMakeFiles/BALL.dir/source/COMMON/exception.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/COMMON/exception.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/COMMON/exception.C
[  9%] Building CXX object CMakeFiles/BALL.dir/source/COMMON/hash.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/COMMON/hash.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/COMMON/hash.C
[  9%] Building CXX object CMakeFiles/BALL.dir/source/COMMON/init.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/COMMON/init.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/COMMON/init.C
[  9%] Building CXX object CMakeFiles/BALL.dir/source/COMMON/logStream.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/COMMON/logStream.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/COMMON/logStream.C
[  9%] Building CXX object CMakeFiles/BALL.dir/source/COMMON/rtti.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/COMMON/rtti.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/COMMON/rtti.C
[  9%] Building CXX object CMakeFiles/BALL.dir/source/COMMON/version.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/COMMON/version.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/COMMON/version.C
[  9%] Building CXX object CMakeFiles/BALL.dir/source/DATATYPE/GRAPH/graphAlgorithms.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/DATATYPE/GRAPH/graphAlgorithms.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DATATYPE/GRAPH/graphAlgorithms.C
[  9%] Building CXX object CMakeFiles/BALL.dir/source/DATATYPE/GRAPH/molecularGraph.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/DATATYPE/GRAPH/molecularGraph.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DATATYPE/GRAPH/molecularGraph.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DATATYPE/GRAPH/molecularGraph.C:4:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DATATYPE/GRAPH/molecularGraph.C:3:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DATATYPE/GRAPH/molecularGraph.C:4:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DATATYPE/GRAPH/molecularGraph.C:3:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DATATYPE/GRAPH/molecularGraph.C:4:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DATATYPE/GRAPH/molecularGraph.C:3:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[  9%] Building CXX object CMakeFiles/BALL.dir/source/DATATYPE/GRAPH/treeWidth.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/DATATYPE/GRAPH/treeWidth.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DATATYPE/GRAPH/treeWidth.C
[  9%] Building CXX object CMakeFiles/BALL.dir/source/DATATYPE/bitVector.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/DATATYPE/bitVector.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DATATYPE/bitVector.C
[  9%] Building CXX object CMakeFiles/BALL.dir/source/DATATYPE/contourSurface.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/DATATYPE/contourSurface.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DATATYPE/contourSurface.C
[  9%] Building CXX object CMakeFiles/BALL.dir/source/DATATYPE/hashGrid.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/DATATYPE/hashGrid.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DATATYPE/hashGrid.C
[  9%] Building CXX object CMakeFiles/BALL.dir/source/DATATYPE/options.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/DATATYPE/options.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DATATYPE/options.C
[  9%] Building CXX object CMakeFiles/BALL.dir/source/DATATYPE/regularExpression.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/DATATYPE/regularExpression.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DATATYPE/regularExpression.C
[  9%] Building CXX object CMakeFiles/BALL.dir/source/DATATYPE/regularData1D.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/DATATYPE/regularData1D.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DATATYPE/regularData1D.C
[  9%] Building CXX object CMakeFiles/BALL.dir/source/DATATYPE/regularData2D.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/DATATYPE/regularData2D.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DATATYPE/regularData2D.C
[  9%] Building CXX object CMakeFiles/BALL.dir/source/DATATYPE/regularData3D.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/DATATYPE/regularData3D.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DATATYPE/regularData3D.C
[ 14%] Building CXX object CMakeFiles/BALL.dir/source/DATATYPE/string.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/DATATYPE/string.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DATATYPE/string.C
[ 14%] Building CXX object CMakeFiles/BALL.dir/source/ENERGY/atomicContactEnergy.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/ENERGY/atomicContactEnergy.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/ENERGY/atomicContactEnergy.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/geometricProperties.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/ENERGY/atomicContactEnergy.C:16:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/ENERGY/atomicContactEnergy.C:12:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/geometricProperties.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/ENERGY/atomicContactEnergy.C:16:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/ENERGY/atomicContactEnergy.C:12:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/geometricProperties.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/ENERGY/atomicContactEnergy.C:16:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/ENERGY/atomicContactEnergy.C:12:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/forwardIterator.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashSet.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SYSTEM/file.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/ENERGY/atomicContactEnergy.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/baseIterator.h: In instantiation of 'BALL::BaseIterator<Container, DataType, Position, Traits>& BALL::BaseIterator<Container, DataType, Position, Traits>::operator=(const BALL::BaseIterator<Container, DataType, Position, Traits>&) [with Container = BALL::HashGridBox3<BALL::ACEFastAtomType*>; DataType = BALL::HashGridBox3<BALL::ACEFastAtomType*>; Position = unsigned int; Traits = BALL::HashGridBox3<BALL::ACEFastAtomType*>::BoxIteratorTraits]':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/forwardIterator.h:63:68:   required from 'BALL::ConstForwardIterator<Container, DataType, Position, Traits>& BALL::ConstForwardIterator<Container, DataType, Position, Traits>::operator=(const BALL::ConstForwardIterator<Container, DataType, Position, Traits>&) [with Container = BALL::HashGridBox3<BALL::ACEFastAtomType*>; DataType = BALL::HashGridBox3<BALL::ACEFastAtomType*>; Position = unsigned int; Traits = BALL::HashGridBox3<BALL::ACEFastAtomType*>::BoxIteratorTraits]'
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/forwardIterator.h:237:76:   required from 'BALL::ForwardIterator<Container, DataType, Position, Traits>& BALL::ForwardIterator<Container, DataType, Position, Traits>::operator=(const BALL::ForwardIterator<Container, DataType, Position, Traits>&) [with Container = BALL::HashGridBox3<BALL::ACEFastAtomType*>; DataType = BALL::HashGridBox3<BALL::ACEFastAtomType*>; Position = unsigned int; Traits = BALL::HashGridBox3<BALL::ACEFastAtomType*>::BoxIteratorTraits]'
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/ENERGY/atomicContactEnergy.C:250:37:   required from here
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/baseIterator.h:111:12: warning: implicitly-declared 'BALL::HashGridBox3<BALL::ACEFastAtomType*>::BoxIteratorTraits& BALL::HashGridBox3<BALL::ACEFastAtomType*>::BoxIteratorTraits::operator=(const BALL::HashGridBox3<BALL::ACEFastAtomType*>::BoxIteratorTraits&)' is deprecated [-Wdeprecated-copy]
  111 |    traits_ = iterator.traits_;
      |    ~~~~~~~~^~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/ENERGY/atomicContactEnergy.C:12:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:209:4: note: because 'BALL::HashGridBox3<BALL::ACEFastAtomType*>::BoxIteratorTraits' has user-provided 'BALL::HashGridBox3<Item>::BoxIteratorTraits::BoxIteratorTraits(const BALL::HashGridBox3<Item>::BoxIteratorTraits&, bool) [with Item = BALL::ACEFastAtomType*]'
  209 |    BoxIteratorTraits(const BoxIteratorTraits& traits, bool /* deep */ = true)
      |    ^~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h: In instantiation of 'BALL::Index BALL::HashGrid3<Item>::getIndex_(const BALL::HashGridBox3<Item>&) const [with Item = BALL::ACEFastAtomType*; BALL::Index = int]':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:1516:17:   required from 'bool BALL::HashGrid3<Item>::getIndices(const BALL::HashGridBox3<Item>&, BALL::Position&, BALL::Position&, BALL::Position&) const [with Item = BALL::ACEFastAtomType*; BALL::Position = unsigned int]'
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:563:21:   required from 'void BALL::HashGridBox3<Item>::getIndices(BALL::Position&, BALL::Position&, BALL::Position&) [with Item = BALL::ACEFastAtomType*; BALL::Position = unsigned int]'
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:206:13:   required from 'BALL::HashGridBox3<Item>::BoxIteratorTraits::BoxIteratorTraits(const BALL::HashGridBox3<Item>&) [with Item = BALL::ACEFastAtomType*]'
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/baseIterator.h:190:23:   required from 'BALL::BaseIterator<Container, DataType, Position, Traits>::BaseIterator(const Container&) [with Container = BALL::HashGridBox3<BALL::ACEFastAtomType*>; DataType = BALL::HashGridBox3<BALL::ACEFastAtomType*>; Position = unsigned int; Traits = BALL::HashGridBox3<BALL::ACEFastAtomType*>::BoxIteratorTraits]'
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/forwardIterator.h:128:67:   required from 'BALL::ConstForwardIterator<Container, DataType, Position, Traits>::ConstForwardIterator(const Container&) [with Container = BALL::HashGridBox3<BALL::ACEFastAtomType*>; DataType = BALL::HashGridBox3<BALL::ACEFastAtomType*>; Position = unsigned int; Traits = BALL::HashGridBox3<BALL::ACEFastAtomType*>::BoxIteratorTraits]'
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/forwardIterator.h:298:20:   required from 'BALL::ForwardIterator<Container, DataType, Position, Traits>::ForwardIterator(const Container&) [with Container = BALL::HashGridBox3<BALL::ACEFastAtomType*>; DataType = BALL::HashGridBox3<BALL::ACEFastAtomType*>; Position = unsigned int; Traits = BALL::HashGridBox3<BALL::ACEFastAtomType*>::BoxIteratorTraits]'
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/forwardIterator.h:309:19:   required from 'static BALL::ForwardIterator<Container, DataType, Position, Traits> BALL::ForwardIterator<Container, DataType, Position, Traits>::begin(const Container&) [with Container = BALL::HashGridBox3<BALL::ACEFastAtomType*>; DataType = BALL::HashGridBox3<BALL::ACEFastAtomType*>; Position = unsigned int; Traits = BALL::HashGridBox3<BALL::ACEFastAtomType*>::BoxIteratorTraits]'
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:332:29:   required from 'BALL::HashGridBox3<Item>::BoxIterator BALL::HashGridBox3<Item>::beginBox() [with Item = BALL::ACEFastAtomType*; BALL::HashGridBox3<Item>::BoxIterator = BALL::ForwardIterator<BALL::HashGridBox3<BALL::ACEFastAtomType*>, BALL::HashGridBox3<BALL::ACEFastAtomType*>, unsigned int, BALL::HashGridBox3<BALL::ACEFastAtomType*>::BoxIteratorTraits>]'
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/ENERGY/atomicContactEnergy.C:250:37:   required from here
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:1726:46: warning: comparison of integer expressions of different signedness: 'int' and 'BALL::Size' {aka 'unsigned int'} [-Wsign-compare]
 1726 |   if ((&box < &box_[0]) || (&box - &box_[0]  >= getSize()))
      |                            ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~
[ 14%] Building CXX object CMakeFiles/BALL.dir/source/ENERGY/composedEnergyProcessor.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/ENERGY/composedEnergyProcessor.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/ENERGY/composedEnergyProcessor.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/ENERGY/energyProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/ENERGY/composedEnergyProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/ENERGY/composedEnergyProcessor.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/ENERGY/energyProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/ENERGY/composedEnergyProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/ENERGY/composedEnergyProcessor.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/ENERGY/energyProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/ENERGY/composedEnergyProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/ENERGY/composedEnergyProcessor.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/ENERGY/energyProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/ENERGY/composedEnergyProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/ENERGY/composedEnergyProcessor.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/ENERGY/energyProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/ENERGY/composedEnergyProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/ENERGY/composedEnergyProcessor.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/ENERGY/energyProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/ENERGY/composedEnergyProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/ENERGY/composedEnergyProcessor.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 14%] Building CXX object CMakeFiles/BALL.dir/source/ENERGY/coulomb.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/ENERGY/coulomb.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/ENERGY/coulomb.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/ENERGY/coulomb.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/ENERGY/coulomb.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/ENERGY/coulomb.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/ENERGY/coulomb.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/ENERGY/coulomb.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/ENERGY/coulomb.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/ENERGY/coulomb.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/ENERGY/coulomb.C: In function 'double BALL::calculateCoulomb(const BALL::AtomContainer&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:90:55: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   90 | for (first_atom_iterator = (atom_container).beginAtom(); \
      |                                                       ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/ENERGY/coulomb.C:23:3: note: in expansion of macro 'BALL_FOREACH_ATOM_PAIR'
   23 |   BALL_FOREACH_ATOM_PAIR(atoms, atom_it1, atom_it2)
      |   ^~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/ENERGY/coulomb.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/ENERGY/coulomb.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:92:58: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   92 |   for (second_atom_iterator = (atom_container).beginAtom(); \
      |                                                          ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/ENERGY/coulomb.C:23:3: note: in expansion of macro 'BALL_FOREACH_ATOM_PAIR'
   23 |   BALL_FOREACH_ATOM_PAIR(atoms, atom_it1, atom_it2)
      |   ^~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/ENERGY/coulomb.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
[ 14%] Building CXX object CMakeFiles/BALL.dir/source/ENERGY/distanceCoulomb.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/ENERGY/distanceCoulomb.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/ENERGY/distanceCoulomb.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/ENERGY/distanceCoulomb.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/ENERGY/distanceCoulomb.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/ENERGY/distanceCoulomb.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/ENERGY/distanceCoulomb.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/ENERGY/distanceCoulomb.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/ENERGY/distanceCoulomb.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/ENERGY/distanceCoulomb.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/ENERGY/distanceCoulomb.C: In function 'double BALL::calculateDistanceCoulomb(const BALL::AtomContainer&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:90:55: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   90 | for (first_atom_iterator = (atom_container).beginAtom(); \
      |                                                       ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/ENERGY/distanceCoulomb.C:30:3: note: in expansion of macro 'BALL_FOREACH_ATOM_PAIR'
   30 |   BALL_FOREACH_ATOM_PAIR(atoms, atom_iterator1, atom_iterator2)
      |   ^~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/ENERGY/distanceCoulomb.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/ENERGY/distanceCoulomb.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:92:58: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   92 |   for (second_atom_iterator = (atom_container).beginAtom(); \
      |                                                          ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/ENERGY/distanceCoulomb.C:30:3: note: in expansion of macro 'BALL_FOREACH_ATOM_PAIR'
   30 |   BALL_FOREACH_ATOM_PAIR(atoms, atom_iterator1, atom_iterator2)
      |   ^~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/ENERGY/distanceCoulomb.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
[ 14%] Building CXX object CMakeFiles/BALL.dir/source/ENERGY/energyProcessor.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/ENERGY/energyProcessor.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/ENERGY/energyProcessor.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/ENERGY/energyProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/ENERGY/energyProcessor.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/ENERGY/energyProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/ENERGY/energyProcessor.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/ENERGY/energyProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/ENERGY/energyProcessor.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/ENERGY/energyProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/ENERGY/energyProcessor.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/ENERGY/energyProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/ENERGY/energyProcessor.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/ENERGY/energyProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/ENERGY/energyProcessor.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 14%] Building CXX object CMakeFiles/BALL.dir/source/FORMAT/amiraMeshFile.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/FORMAT/amiraMeshFile.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/amiraMeshFile.C
[ 14%] Building CXX object CMakeFiles/BALL.dir/source/FORMAT/antechamberFile.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/FORMAT/antechamberFile.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/antechamberFile.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/antechamberFile.C:3:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/antechamberFile.C:3:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/antechamberFile.C:3:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/antechamberFile.C:3:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/antechamberFile.C:3:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/antechamberFile.C:3:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/antechamberFile.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/antechamberFile.C: In member function 'virtual bool BALL::AntechamberFile::write(const BALL::AtomContainer&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:108:49: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  108 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/antechamberFile.C:133:3: note: in expansion of macro 'BALL_FOREACH_BOND'
  133 |   BALL_FOREACH_BOND(ac, at_it, bit)
      |   ^~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/antechamberFile.C:3:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/antechamberFile.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:110:51: warning: implicitly-declared 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  110 |   for (bond_iterator = (*atom_iterator).beginBond(); \
      |                                                   ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/antechamberFile.C:133:3: note: in expansion of macro 'BALL_FOREACH_BOND'
  133 |   BALL_FOREACH_BOND(ac, at_it, bit)
      |   ^~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/antechamberFile.C:3:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:47:15: note: because 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   47 |   BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:24:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   24 |  class ConstRandomAccessIterator
      |        ^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/antechamberFile.C:3:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/antechamberFile.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/antechamberFile.C: In member function 'virtual bool BALL::AntechamberFile::write(const BALL::AtomContainer&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:110:51: note: synthesized method 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' first required here
  110 |   for (bond_iterator = (*atom_iterator).beginBond(); \
      |                                                   ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/antechamberFile.C:133:3: note: in expansion of macro 'BALL_FOREACH_BOND'
  133 |   BALL_FOREACH_BOND(ac, at_it, bit)
      |   ^~~~~~~~~~~~~~~~~
[ 14%] Building CXX object CMakeFiles/BALL.dir/source/FORMAT/bruker1DFile.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/FORMAT/bruker1DFile.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/bruker1DFile.C
[ 14%] Building CXX object CMakeFiles/BALL.dir/source/FORMAT/bruker2DFile.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/FORMAT/bruker2DFile.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/bruker2DFile.C
[ 14%] Building CXX object CMakeFiles/BALL.dir/source/FORMAT/commandlineParser.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/FORMAT/commandlineParser.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/commandlineParser.C
[ 14%] Building CXX object CMakeFiles/BALL.dir/source/FORMAT/dockResultFile.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/FORMAT/dockResultFile.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/dockResultFile.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/secondaryStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBdefs.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/dockResultFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/dockResultFile.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/dockResultFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/dockResultFile.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/secondaryStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBdefs.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/dockResultFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/dockResultFile.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/dockResultFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/dockResultFile.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/secondaryStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBdefs.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/dockResultFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/dockResultFile.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/dockResultFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/dockResultFile.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/flexibleMolecule.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/receptor.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/result.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/dockResultFile.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/dockResultFile.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/dockResultFile.C: In member function 'void BALL::DockResultFile::writeProtein(BALL::Protein*, QXmlStreamWriter&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:187:58: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  187 | for (residue_iterator = (residue_container).beginResidue(); \
      |                                                          ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/dockResultFile.C:806:4: note: in expansion of macro 'BALL_FOREACH_RESIDUE'
  806 |    BALL_FOREACH_RESIDUE(*prot,ri)
      |    ^~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/dockResultFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/dockResultFile.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Residue; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::ResidueIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Residue; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::ResidueIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/flexibleMolecule.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/receptor.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/result.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/dockResultFile.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/dockResultFile.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/dockResultFile.C: In member function 'void BALL::DockResultFile::writeProtein(BALL::Protein*, QXmlStreamWriter&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:187:58: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>&)' first required here
  187 | for (residue_iterator = (residue_container).beginResidue(); \
      |                                                          ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/dockResultFile.C:806:4: note: in expansion of macro 'BALL_FOREACH_RESIDUE'
  806 |    BALL_FOREACH_RESIDUE(*prot,ri)
      |    ^~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/flexibleMolecule.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/receptor.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/result.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/dockResultFile.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/dockResultFile.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/dockResultFile.C: In member function 'void BALL::DockResultFile::writeResidue(BALL::Residue*, QXmlStreamWriter&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:64:49: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   64 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/dockResultFile.C:820:4: note: in expansion of macro 'BALL_FOREACH_ATOM'
  820 |    BALL_FOREACH_ATOM(*res, pai)
      |    ^~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/dockResultFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/dockResultFile.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/flexibleMolecule.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/receptor.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/result.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/dockResultFile.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/dockResultFile.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/dockResultFile.C: In member function 'void BALL::DockResultFile::writeResidue(BALL::Residue*, QXmlStreamWriter&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:64:49: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' first required here
   64 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/dockResultFile.C:820:4: note: in expansion of macro 'BALL_FOREACH_ATOM'
  820 |    BALL_FOREACH_ATOM(*res, pai)
      |    ^~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/dockResultFile.C: In member function 'void BALL::DockResultFile::writeMolecule(BALL::Molecule*, QXmlStreamWriter&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:64:49: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   64 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/dockResultFile.C:982:4: note: in expansion of macro 'BALL_FOREACH_ATOM'
  982 |    BALL_FOREACH_ATOM(*molecule, a_it)
      |    ^~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/dockResultFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/dockResultFile.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/dockResultFile.C:990:31: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  990 |    a_it = molecule->beginAtom();
      |                               ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/dockResultFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/dockResultFile.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/flexibleMolecule.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/receptor.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/result.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/dockResultFile.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/dockResultFile.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:64:49: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   64 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/dockResultFile.C:991:4: note: in expansion of macro 'BALL_FOREACH_ATOM'
  991 |    BALL_FOREACH_ATOM(*molecule, a_it)
      |    ^~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/dockResultFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/dockResultFile.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/flexibleMolecule.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/receptor.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/result.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/dockResultFile.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/dockResultFile.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:108:49: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  108 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/dockResultFile.C:1001:4: note: in expansion of macro 'BALL_FOREACH_BOND'
 1001 |    BALL_FOREACH_BOND(*molecule, a_it, b_it)
      |    ^~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/dockResultFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/dockResultFile.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/flexibleMolecule.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/receptor.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/result.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/dockResultFile.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/dockResultFile.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:110:51: warning: implicitly-declared 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  110 |   for (bond_iterator = (*atom_iterator).beginBond(); \
      |                                                   ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/dockResultFile.C:1001:4: note: in expansion of macro 'BALL_FOREACH_BOND'
 1001 |    BALL_FOREACH_BOND(*molecule, a_it, b_it)
      |    ^~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBdefs.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/dockResultFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/dockResultFile.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:437:15: note: because 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::RandomAccessIterator<Container, DataType, Position, Traits>::RandomAccessIterator(const BALL::RandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
  437 |   BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:413:8: warning: implicitly-declared 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  413 |  class RandomAccessIterator
      |        ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:47:15: note: because 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   47 |   BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:24:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   24 |  class ConstRandomAccessIterator
      |        ^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/dockResultFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/dockResultFile.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBdefs.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/dockResultFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/dockResultFile.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:413:8: note: synthesized method 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' first required here
  413 |  class RandomAccessIterator
      |        ^~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/flexibleMolecule.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/receptor.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/result.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/dockResultFile.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/dockResultFile.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/dockResultFile.C: In member function 'void BALL::DockResultFile::writeMolecule(BALL::Molecule*, QXmlStreamWriter&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:110:51: note: synthesized method 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' first required here
  110 |   for (bond_iterator = (*atom_iterator).beginBond(); \
      |                                                   ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/dockResultFile.C:1001:4: note: in expansion of macro 'BALL_FOREACH_BOND'
 1001 |    BALL_FOREACH_BOND(*molecule, a_it, b_it)
      |    ^~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/dockResultFile.C:1007:31: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
 1007 |    a_it = molecule->beginAtom();
      |                               ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/dockResultFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/dockResultFile.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/flexibleMolecule.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/receptor.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/result.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/dockResultFile.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/dockResultFile.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:64:49: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   64 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/dockResultFile.C:1008:4: note: in expansion of macro 'BALL_FOREACH_ATOM'
 1008 |    BALL_FOREACH_ATOM(*molecule, a_it)
      |    ^~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/dockResultFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/dockResultFile.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 14%] Building CXX object CMakeFiles/BALL.dir/source/FORMAT/CCP4File.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/FORMAT/CCP4File.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/CCP4File.C
[ 14%] Building CXX object CMakeFiles/BALL.dir/source/FORMAT/CIFFile.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/FORMAT/CIFFile.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/CIFFile.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/molecule.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/CIFFile.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/CIFFile.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/molecule.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/CIFFile.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/CIFFile.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/molecule.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/CIFFile.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/CIFFile.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/molecule.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/CIFFile.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/CIFFile.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/molecule.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/CIFFile.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/CIFFile.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/molecule.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/CIFFile.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/CIFFile.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/CIFFile.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/CIFFile.h: In member function 'BALL::CIFFile::SaveFrame& BALL::CIFFile::SaveFrame::operator=(const BALL::CIFFile::SaveFrame&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/CIFFile.h:76:10: warning: implicitly-declared 'BALL::CIFFile::Item& BALL::CIFFile::Item::operator=(const BALL::CIFFile::Item&)' is deprecated [-Wdeprecated-copy]
   76 |    class SaveFrame
      |          ^~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/CIFFile.C:134:2: note: because 'BALL::CIFFile::Item' has user-provided 'BALL::CIFFile::Item::Item(const BALL::CIFFile::Item&)'
  134 |  CIFFile::Item::Item(const Item& item)
      |  ^~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/CIFFile.C: In constructor 'BALL::CIFFile::Datacontent::Datacontent(BALL::CIFFile::SaveFrame)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/CIFFile.C:379:15: note: synthesized method 'BALL::CIFFile::SaveFrame& BALL::CIFFile::SaveFrame::operator=(const BALL::CIFFile::SaveFrame&)' first required here
  379 |   saveframe = new_saveframe;
      |               ^~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/CIFFile.C: In constructor 'BALL::CIFFile::Datacontent::Datacontent(BALL::CIFFile::Item)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/CIFFile.C:385:14: warning: implicitly-declared 'BALL::CIFFile::Item& BALL::CIFFile::Item::operator=(const BALL::CIFFile::Item&)' is deprecated [-Wdeprecated-copy]
  385 |   dataitem = new_item;
      |              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/CIFFile.C:134:2: note: because 'BALL::CIFFile::Item' has user-provided 'BALL::CIFFile::Item::Item(const BALL::CIFFile::Item&)'
  134 |  CIFFile::Item::Item(const Item& item)
      |  ^~~~~~~
[ 14%] Building CXX object CMakeFiles/BALL.dir/source/FORMAT/DCDFile.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/FORMAT/DCDFile.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/DCDFile.C
[ 14%] Building CXX object CMakeFiles/BALL.dir/source/FORMAT/DSN6File.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/FORMAT/DSN6File.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/DSN6File.C
[ 14%] Building CXX object CMakeFiles/BALL.dir/source/FORMAT/GAMESSDatFile.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/FORMAT/GAMESSDatFile.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/GAMESSDatFile.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/GAMESSDatFile.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/GAMESSDatFile.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/GAMESSDatFile.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/GAMESSDatFile.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/GAMESSDatFile.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/GAMESSDatFile.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/GAMESSDatFile.C: In member function 'virtual bool BALL::GAMESSDatFile::write(const BALL::System&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/GAMESSDatFile.C:88:32: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   88 |   for (atIt = system.beginAtom(); +atIt; ++atIt)
      |                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/GAMESSDatFile.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
[ 14%] Building CXX object CMakeFiles/BALL.dir/source/FORMAT/genericMolFile.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/FORMAT/genericMolFile.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/genericMolFile.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/genericMolFile.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/genericMolFile.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/genericMolFile.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/genericMolFile.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/genericMolFile.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/genericMolFile.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 14%] Building CXX object CMakeFiles/BALL.dir/source/FORMAT/HINFile.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/FORMAT/HINFile.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/HINFile.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/HINFile.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/simpleBox3.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/HINFile.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/HINFile.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/HINFile.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/simpleBox3.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/HINFile.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/HINFile.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/HINFile.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/simpleBox3.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/HINFile.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/HINFile.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/HINFile.C: In member function 'virtual bool BALL::HINFile::write(const BALL::System&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/HINFile.C:153:35: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  153 |   for (atom_it = system.beginAtom(); +atom_it; ++atom_it)
      |                                   ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/simpleBox3.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/HINFile.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/HINFile.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/HINFile.C:377:35: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  377 |   for (atom_it = system.beginAtom(); +atom_it; ++atom_it)
      |                                   ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/simpleBox3.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/HINFile.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/HINFile.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
[ 14%] Building CXX object CMakeFiles/BALL.dir/source/FORMAT/HMOFile.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/FORMAT/HMOFile.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/HMOFile.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/HMOFile.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/HMOFile.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/HMOFile.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/HMOFile.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/HMOFile.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/HMOFile.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/HMOFile.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/HMOFile.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/HMOFile.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/HMOFile.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/HMOFile.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/HMOFile.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 14%] Building CXX object CMakeFiles/BALL.dir/source/FORMAT/INIFile.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/FORMAT/INIFile.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/INIFile.C
[ 14%] Building CXX object CMakeFiles/BALL.dir/source/FORMAT/JCAMPFile.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/FORMAT/JCAMPFile.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/JCAMPFile.C
[ 14%] Building CXX object CMakeFiles/BALL.dir/source/FORMAT/KCFFile.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/FORMAT/KCFFile.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/KCFFile.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/KCFFile.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/KCFFile.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/KCFFile.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/KCFFile.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/KCFFile.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/KCFFile.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/KCFFile.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/KCFFile.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/KCFFile.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/KCFFile.C: In member function 'virtual bool BALL::KCFFile::write(const BALL::Molecule&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/KCFFile.C:91:32: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   91 |   for (ai = molecule.beginAtom(); +ai; ++ai)
      |                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/KCFFile.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/KCFFile.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
[ 19%] Building CXX object CMakeFiles/BALL.dir/source/FORMAT/lineBasedFile.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/FORMAT/lineBasedFile.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/lineBasedFile.C
[ 19%] Building CXX object CMakeFiles/BALL.dir/source/FORMAT/MOLFile.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/FORMAT/MOLFile.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/MOLFile.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/MOLFile.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/MOLFile.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/MOLFile.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/MOLFile.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/MOLFile.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/MOLFile.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/MOLFile.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/MOLFile.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/MOLFile.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/MOLFile.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/MOLFile.C: In member function 'virtual bool BALL::MOLFile::write(const BALL::Molecule&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:108:49: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  108 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/MOLFile.C:164:3: note: in expansion of macro 'BALL_FOREACH_BOND'
  164 |   BALL_FOREACH_BOND(molecule, it, bond_it)
      |   ^~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/MOLFile.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/MOLFile.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/MOLFile.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:110:51: warning: implicitly-declared 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  110 |   for (bond_iterator = (*atom_iterator).beginBond(); \
      |                                                   ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/MOLFile.C:164:3: note: in expansion of macro 'BALL_FOREACH_BOND'
  164 |   BALL_FOREACH_BOND(molecule, it, bond_it)
      |   ^~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/MOLFile.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:47:15: note: because 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   47 |   BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:24:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   24 |  class ConstRandomAccessIterator
      |        ^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/MOLFile.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/MOLFile.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/MOLFile.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/MOLFile.C: In member function 'virtual bool BALL::MOLFile::write(const BALL::Molecule&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:110:51: note: synthesized method 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' first required here
  110 |   for (bond_iterator = (*atom_iterator).beginBond(); \
      |                                                   ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/MOLFile.C:164:3: note: in expansion of macro 'BALL_FOREACH_BOND'
  164 |   BALL_FOREACH_BOND(molecule, it, bond_it)
      |   ^~~~~~~~~~~~~~~~~
[ 19%] Building CXX object CMakeFiles/BALL.dir/source/FORMAT/molFileFactory.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/FORMAT/molFileFactory.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/molFileFactory.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/secondaryStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBdefs.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/molFileFactory.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/molFileFactory.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/secondaryStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBdefs.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/molFileFactory.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/molFileFactory.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/secondaryStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBdefs.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/molFileFactory.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/molFileFactory.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 19%] Building CXX object CMakeFiles/BALL.dir/source/FORMAT/MOPACInputFile.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/FORMAT/MOPACInputFile.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/MOPACInputFile.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/MOPACInputFile.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/MOPACInputFile.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/MOPACInputFile.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/MOPACInputFile.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/MOPACInputFile.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/MOPACInputFile.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/MOPACInputFile.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/MOPACInputFile.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/MOPACInputFile.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/MOPACInputFile.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/MOPACInputFile.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/MOPACInputFile.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 19%] Building CXX object CMakeFiles/BALL.dir/source/FORMAT/MOPACOutputFile.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/FORMAT/MOPACOutputFile.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/MOPACOutputFile.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/MOPACOutputFile.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/MOPACOutputFile.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/MOPACOutputFile.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/MOPACOutputFile.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/MOPACOutputFile.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/MOPACOutputFile.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/MOPACOutputFile.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/MOPACOutputFile.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/MOPACOutputFile.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/MOPACOutputFile.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/MOPACOutputFile.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/MOPACOutputFile.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 19%] Building CXX object CMakeFiles/BALL.dir/source/FORMAT/SDFile.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/FORMAT/SDFile.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/SDFile.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/SDFile.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/MOLFile.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/SDFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/SDFile.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/SDFile.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/MOLFile.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/SDFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/SDFile.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/SDFile.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/MOLFile.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/SDFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/SDFile.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 19%] Building CXX object CMakeFiles/BALL.dir/source/FORMAT/MOL2File.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/FORMAT/MOL2File.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/MOL2File.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/MOL2File.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/MOL2File.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/MOL2File.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/MOL2File.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/MOL2File.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/MOL2File.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/MOL2File.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/MOL2File.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/MOL2File.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/MOL2File.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/MOL2File.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/MOL2File.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/MOL2File.C:15:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/MOL2File.C: In member function 'virtual bool BALL::MOL2File::write(const BALL::Molecule&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:108:49: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  108 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/MOL2File.C:127:3: note: in expansion of macro 'BALL_FOREACH_BOND'
  127 |   BALL_FOREACH_BOND(new_molecule, atom_it, bond_it)
      |   ^~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/MOL2File.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/MOL2File.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/MOL2File.C:15:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:110:51: warning: implicitly-declared 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  110 |   for (bond_iterator = (*atom_iterator).beginBond(); \
      |                                                   ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/MOL2File.C:127:3: note: in expansion of macro 'BALL_FOREACH_BOND'
  127 |   BALL_FOREACH_BOND(new_molecule, atom_it, bond_it)
      |   ^~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/MOL2File.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/MOL2File.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:47:15: note: because 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   47 |   BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:24:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   24 |  class ConstRandomAccessIterator
      |        ^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/MOL2File.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/MOL2File.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/MOL2File.C:15:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/MOL2File.C: In member function 'virtual bool BALL::MOL2File::write(const BALL::Molecule&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:110:51: note: synthesized method 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' first required here
  110 |   for (bond_iterator = (*atom_iterator).beginBond(); \
      |                                                   ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/MOL2File.C:127:3: note: in expansion of macro 'BALL_FOREACH_BOND'
  127 |   BALL_FOREACH_BOND(new_molecule, atom_it, bond_it)
      |   ^~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/MOL2File.C:162:36: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  162 |   atom_it = new_molecule.beginAtom();
      |                                    ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/MOL2File.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/MOL2File.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/MOL2File.C:15:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:108:49: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  108 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/MOL2File.C:212:4: note: in expansion of macro 'BALL_FOREACH_BOND'
  212 |    BALL_FOREACH_BOND(new_molecule, atom_it, bond_it)
      |    ^~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/MOL2File.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/MOL2File.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/MOL2File.C:15:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:110:51: warning: implicitly-declared 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  110 |   for (bond_iterator = (*atom_iterator).beginBond(); \
      |                                                   ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/MOL2File.C:212:4: note: in expansion of macro 'BALL_FOREACH_BOND'
  212 |    BALL_FOREACH_BOND(new_molecule, atom_it, bond_it)
      |    ^~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/MOL2File.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/MOL2File.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:47:15: note: because 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   47 |   BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/MOL2File.C: In member function 'bool BALL::MOL2File::containsAtomChilds_(BALL::AtomContainerConstIterator&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/MOL2File.C:993:51: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::ChildCompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::ChildCompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::ChildCompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  993 |   for (children_it = frag_it->beginChildComposite(); +children_it; ++children_it)
      |                                                   ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/MOL2File.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/MOL2File.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::ChildCompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::ChildCompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
[ 19%] Building CXX object CMakeFiles/BALL.dir/source/FORMAT/NMRStarFile.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/FORMAT/NMRStarFile.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/NMRStarFile.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/molecule.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/CIFFile.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/NMRStarFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/NMRStarFile.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/molecule.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/CIFFile.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/NMRStarFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/NMRStarFile.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/molecule.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/CIFFile.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/NMRStarFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/NMRStarFile.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/molecule.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/CIFFile.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/NMRStarFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/NMRStarFile.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/molecule.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/CIFFile.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/NMRStarFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/NMRStarFile.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/molecule.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/CIFFile.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/NMRStarFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/NMRStarFile.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/NMRStarFile.C: In member function 'bool BALL::NMRStarFile::assignShifts_(BALL::NMRStarFile::BALLToBMRBMapper&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/NMRStarFile.C:1204:77: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
 1204 |    r_it = const_cast<Chain*>(ball_to_bmrb_mapping.getChain())->beginResidue();
      |                                                                             ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/molecule.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/CIFFile.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/NMRStarFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/NMRStarFile.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Residue; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::ResidueIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Residue; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::ResidueIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/NMRStarFile.C: In member function 'bool BALL::NMRStarFile::assignShifts_(BALL::NMRStarFile::BALLToBMRBMapper&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/NMRStarFile.C:1204:77: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>&)' first required here
 1204 |    r_it = const_cast<Chain*>(ball_to_bmrb_mapping.getChain())->beginResidue();
      |                                                                             ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/NMRStarFile.C: In member function 'int BALL::NMRStarFile::valueToInt_(BALL::String)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/NMRStarFile.C:2277:24: warning: catching polymorphic type 'class BALL::Exception::InvalidFormat' by value [-Wcatch-value=]
 2277 |    } catch (Exception::InvalidFormat) {
      |                        ^~~~~~~~~~~~~
[ 19%] Building CXX object CMakeFiles/BALL.dir/source/FORMAT/paramFile.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/FORMAT/paramFile.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/paramFile.C
[ 19%] Building CXX object CMakeFiles/BALL.dir/source/FORMAT/parameters.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/FORMAT/parameters.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/parameters.C
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/parameters.C: In copy constructor 'BALL::Parameters::Parameters(const BALL::Parameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/parameters.C:19:34: warning: implicitly-declared 'BALL::INIFile::INIFile(const BALL::INIFile&)' is deprecated [-Wdeprecated-copy]
   19 |    INI_file_(parameters.INI_file_)
      |                                  ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/parameters.h:12,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/parameters.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/INIFile.h:378:18: note: because 'BALL::INIFile' has user-provided 'const BALL::INIFile& BALL::INIFile::operator=(const BALL::INIFile&)'
  378 |   const INIFile& operator = (const INIFile& file)
      |                  ^~~~~~~~
[ 19%] Building CXX object CMakeFiles/BALL.dir/source/FORMAT/parameterSection.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/FORMAT/parameterSection.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/parameterSection.C
[ 19%] Building CXX object CMakeFiles/BALL.dir/source/FORMAT/PDBdefs.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/FORMAT/PDBdefs.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/PDBdefs.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/secondaryStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBdefs.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/PDBdefs.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBdefs.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/PDBdefs.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/secondaryStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBdefs.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/PDBdefs.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBdefs.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/PDBdefs.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/secondaryStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBdefs.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/PDBdefs.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBdefs.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/PDBdefs.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 19%] Building CXX object CMakeFiles/BALL.dir/source/FORMAT/PDBFileGeneral.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/FORMAT/PDBFileGeneral.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/PDBFileGeneral.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/secondaryStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBdefs.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/PDBFileGeneral.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/PDBFileGeneral.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/secondaryStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBdefs.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/PDBFileGeneral.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/PDBFileGeneral.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/secondaryStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBdefs.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/PDBFileGeneral.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/PDBFileGeneral.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/PDBFileGeneral.C: In member function 'bool BALL::PDBFile::parseLine(const char*, BALL::Size, const char*, ...)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/PDBFileGeneral.C:381:10: warning: 'char* strncpy(char*, const char*, size_t)' output truncated before terminating nul copying 4 bytes from a string of the same length [-Wstringop-truncation]
  381 |   strncpy(formats, "%.6s", 4);
      |   ~~~~~~~^~~~~~~~~~~~~~~~~~~~
[ 19%] Building CXX object CMakeFiles/BALL.dir/source/FORMAT/PDBFileDetails.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/FORMAT/PDBFileDetails.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/PDBFileDetails.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/secondaryStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBdefs.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/PDBFileDetails.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/PDBFileDetails.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/secondaryStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBdefs.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/PDBFileDetails.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/PDBFileDetails.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/secondaryStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBdefs.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/PDBFileDetails.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/PDBFileDetails.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/PDBFileDetails.C: In member function 'void BALL::PDBFile::postprocessSheetsTurns_(BALL::PDBFile::QuadrupleList&, BALL::PDBFile::SecStructList&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/PDBFileDetails.C:195:58: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  195 |     for (protein_res_it = current_protein_->beginResidue(); !protein_res_it.isEnd(); ++protein_res_it)
      |                                                          ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/PDBFileDetails.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Residue; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::ResidueIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Residue; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::ResidueIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/PDBFileDetails.C: In member function 'void BALL::PDBFile::postprocessSheetsTurns_(BALL::PDBFile::QuadrupleList&, BALL::PDBFile::SecStructList&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/PDBFileDetails.C:195:58: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>&)' first required here
  195 |     for (protein_res_it = current_protein_->beginResidue(); !protein_res_it.isEnd(); ++protein_res_it)
      |                                                          ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/PDBFileDetails.C: In member function 'void BALL::PDBFile::postprocessRandomCoils_()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/PDBFileDetails.C:287:49: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  287 |    for (protein_res_it = chain_it->beginResidue();
      |                                                 ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/PDBFileDetails.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Residue; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::ResidueIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/PDBFileDetails.C: In static member function 'static void BALL::PDBFile::updateAdditionalAtomInfo_(const BALL::PDB::Structure::AtomEntry&, BALL::PDB::AdditionalAtomInfo&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/PDBFileDetails.C:1460:12: warning: 'char* strncpy(char*, const char*, size_t)' specified bound 4 equals destination size [-Wstringop-truncation]
 1460 |     strncpy(aai.residue_name, atom.residue->getName().c_str(), 4);
      |     ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/PDBFileDetails.C: In member function 'void BALL::PDBFile::writeCoordinateSection_(const BALL::PDB::Structure&, const BALL::PDBInfo&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/PDBFileDetails.C:1553:12: warning: 'char* strncpy(char*, const char*, size_t)' specified bound 4 equals destination size [-Wstringop-truncation]
 1553 |     strncpy(atom_info.residue_name, atom_info.current_residue->getName().c_str(), 4);
      |     ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/PDBFileDetails.C: In member function 'void BALL::PDBFile::writeSEQRESSection_(const std::vector<std::pair<char, BALL::String> >&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/PDBFileDetails.C:1785:11: warning: 'char* strncpy(char*, const char*, size_t)' output may be truncated copying 3 bytes from a string of length 3 [-Wstringop-truncation]
 1785 |    strncpy(sr.residue_name[res_counter++], seq, 3);
      |    ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 19%] Building CXX object CMakeFiles/BALL.dir/source/FORMAT/PDBInfo.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/FORMAT/PDBInfo.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/PDBInfo.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/secondaryStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBdefs.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBInfo.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/PDBInfo.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBRecords.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBInfo.h:12,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/PDBInfo.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/secondaryStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBdefs.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBInfo.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/PDBInfo.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBRecords.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBInfo.h:12,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/PDBInfo.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/secondaryStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBdefs.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBInfo.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/PDBInfo.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBRecords.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBInfo.h:12,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/PDBInfo.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 19%] Building CXX object CMakeFiles/BALL.dir/source/FORMAT/PDBRecords.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/FORMAT/PDBRecords.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/PDBRecords.C
[ 19%] Building CXX object CMakeFiles/BALL.dir/source/FORMAT/pubchemDownloader.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/FORMAT/pubchemDownloader.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/pubchemDownloader.C
[ 19%] Building CXX object CMakeFiles/BALL.dir/source/FORMAT/resourceFile.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/FORMAT/resourceFile.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/resourceFile.C
[ 19%] Building CXX object CMakeFiles/BALL.dir/source/FORMAT/SCWRLRotamerFile.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/FORMAT/SCWRLRotamerFile.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/SCWRLRotamerFile.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/rotamerLibrary.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/SCWRLRotamerFile.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/rotamerLibrary.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/SCWRLRotamerFile.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/rotamerLibrary.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/SCWRLRotamerFile.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/rotamerLibrary.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/SCWRLRotamerFile.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/rotamerLibrary.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/SCWRLRotamerFile.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/rotamerLibrary.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/SCWRLRotamerFile.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 19%] Building CXX object CMakeFiles/BALL.dir/source/FORMAT/trajectoryFile.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/FORMAT/trajectoryFile.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/trajectoryFile.C
[ 19%] Building CXX object CMakeFiles/BALL.dir/source/FORMAT/trajectoryFileFactory.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/FORMAT/trajectoryFileFactory.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/trajectoryFileFactory.C
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/trajectoryFileFactory.C: In static member function 'static BALL::TrajectoryFile* BALL::TrajectoryFileFactory::detectFormat(const BALL::String&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/trajectoryFileFactory.C:103:68: warning: unused parameter 'name' [-Wunused-parameter]
  103 |  TrajectoryFile* TrajectoryFileFactory::detectFormat(const String& name)
      |                                                      ~~~~~~~~~~~~~~^~~~
[ 19%] Building CXX object CMakeFiles/BALL.dir/source/FORMAT/TRRFile.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/FORMAT/TRRFile.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/TRRFile.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/TRRFile.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/snapShot.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/trajectoryFile.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/TRRFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/TRRFile.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/TRRFile.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/snapShot.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/trajectoryFile.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/TRRFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/TRRFile.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/TRRFile.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/snapShot.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/trajectoryFile.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/TRRFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/TRRFile.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 19%] Building CXX object CMakeFiles/BALL.dir/source/FORMAT/XYZFile.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/FORMAT/XYZFile.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/XYZFile.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/XYZFile.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/XYZFile.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/XYZFile.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/XYZFile.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/XYZFile.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/XYZFile.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 23%] Building CXX object CMakeFiles/BALL.dir/source/FORMAT/CIFParserParser.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/FORMAT/CIFParserParser.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/FORMAT/CIFParserParser.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/molecule.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/CIFFile.h:17,
                 from source/FORMAT/CIFParserParser.y:2:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/molecule.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/CIFFile.h:17,
                 from source/FORMAT/CIFParserParser.y:2:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/molecule.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/CIFFile.h:17,
                 from source/FORMAT/CIFParserParser.y:2:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/molecule.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/CIFFile.h:17,
                 from source/FORMAT/CIFParserParser.y:2:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/molecule.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/CIFFile.h:17,
                 from source/FORMAT/CIFParserParser.y:2:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/molecule.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/CIFFile.h:17,
                 from source/FORMAT/CIFParserParser.y:2:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/FORMAT/CIFParserParser.C: In function 'int CIFParserparse()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/FORMAT/CIFParserParser.C:1670:20: warning: ISO C++ forbids converting a string constant to 'char*' [-Wwrite-strings]
 1670 |       yyerror (YY_("syntax error"));
      |                    ^~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/FORMAT/CIFParserParser.C:309:22: note: in definition of macro 'YY_'
  309 | #  define YY_(Msgid) Msgid
      |                      ^~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/FORMAT/CIFParserParser.C:1781:16: warning: ISO C++ forbids converting a string constant to 'char*' [-Wwrite-strings]
 1781 |   yyerror (YY_("memory exhausted"));
      |                ^~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/FORMAT/CIFParserParser.C:309:22: note: in definition of macro 'YY_'
  309 | #  define YY_(Msgid) Msgid
      |                      ^~~~~
source/FORMAT/CIFParserParser.y:239:33: warning: 'sprintf' may write a terminating nul past the end of the destination [-Wformat-overflow=]
source/FORMAT/CIFParserParser.y:239:18: note: 'sprintf' output between 2 and 2551 bytes into a destination of size 2550
source/FORMAT/CIFParserParser.y:236:33: warning: 'sprintf' may write a terminating nul past the end of the destination [-Wformat-overflow=]
source/FORMAT/CIFParserParser.y:236:18: note: 'sprintf' output between 2 and 2551 bytes into a destination of size 2550
source/FORMAT/CIFParserParser.y:233:33: warning: '%s' directive writing up to 2549 bytes into a region of size between 1 and 2550 [-Wformat-overflow=]
source/FORMAT/CIFParserParser.y:233:18: note: 'sprintf' output between 1 and 5099 bytes into a destination of size 2550
source/FORMAT/CIFParserParser.y:230:33: warning: '%s' directive writing up to 2549 bytes into a region of size between 0 and 2549 [-Wformat-overflow=]
source/FORMAT/CIFParserParser.y:230:18: note: 'sprintf' output between 2 and 5100 bytes into a destination of size 2550
source/FORMAT/CIFParserParser.y:227:33: warning: '%s' directive writing up to 2549 bytes into a region of size between 1 and 2550 [-Wformat-overflow=]
source/FORMAT/CIFParserParser.y:227:18: note: 'sprintf' output between 1 and 5099 bytes into a destination of size 2550
source/FORMAT/CIFParserParser.y:219:89: warning: 'sprintf' may write a terminating nul past the end of the destination [-Wformat-overflow=]
source/FORMAT/CIFParserParser.y:219:74: note: 'sprintf' output between 2 and 2551 bytes into a destination of size 2550
source/FORMAT/CIFParserParser.y:218:71: warning: 'sprintf' may write a terminating nul past the end of the destination [-Wformat-overflow=]
source/FORMAT/CIFParserParser.y:218:56: note: 'sprintf' output between 2 and 2551 bytes into a destination of size 2550
source/FORMAT/CIFParserParser.y:217:33: warning: '%s' directive writing up to 2549 bytes into a region of size between 0 and 2549 [-Wformat-overflow=]
source/FORMAT/CIFParserParser.y:217:18: note: 'sprintf' output between 2 and 5100 bytes into a destination of size 2550
source/FORMAT/CIFParserParser.y:214:95: warning: '%s' directive writing up to 2549 bytes into a region of size between 1 and 2550 [-Wformat-overflow=]
source/FORMAT/CIFParserParser.y:214:80: note: 'sprintf' output between 1 and 5099 bytes into a destination of size 2550
source/FORMAT/CIFParserParser.y:213:95: warning: '%s' directive writing up to 2549 bytes into a region of size between 1 and 2550 [-Wformat-overflow=]
source/FORMAT/CIFParserParser.y:213:80: note: 'sprintf' output between 1 and 5099 bytes into a destination of size 2550
source/FORMAT/CIFParserParser.y:209:111: warning: 'sprintf' may write a terminating nul past the end of the destination [-Wformat-overflow=]
source/FORMAT/CIFParserParser.y:209:96: note: 'sprintf' output between 2 and 2551 bytes into a destination of size 2550
source/FORMAT/CIFParserParser.y:205:159: warning: '%s' directive writing up to 2549 bytes into a region of size between 0 and 2549 [-Wformat-overflow=]
source/FORMAT/CIFParserParser.y:205:144: note: 'sprintf' output between 2 and 5100 bytes into a destination of size 2550
source/FORMAT/CIFParserParser.y:204:139: warning: '%s' directive writing up to 2549 bytes into a region of size between 1 and 2550 [-Wformat-overflow=]
source/FORMAT/CIFParserParser.y:204:124: note: 'sprintf' output between 1 and 5099 bytes into a destination of size 2550
source/FORMAT/CIFParserParser.y:203:139: warning: '%s' directive writing up to 2549 bytes into a region of size between 1 and 2550 [-Wformat-overflow=]
source/FORMAT/CIFParserParser.y:203:124: note: 'sprintf' output between 1 and 7648 bytes into a destination of size 2550
source/FORMAT/CIFParserParser.y:198:139: warning: 'sprintf' may write a terminating nul past the end of the destination [-Wformat-overflow=]
source/FORMAT/CIFParserParser.y:198:124: note: 'sprintf' output between 2 and 2551 bytes into a destination of size 2550
source/FORMAT/CIFParserParser.y:197:139: warning: 'sprintf' may write a terminating nul past the end of the destination [-Wformat-overflow=]
source/FORMAT/CIFParserParser.y:197:124: note: 'sprintf' output between 2 and 2551 bytes into a destination of size 2550
source/FORMAT/CIFParserParser.y:196:159: warning: '%s' directive writing up to 2549 bytes into a region of size between 0 and 2549 [-Wformat-overflow=]
source/FORMAT/CIFParserParser.y:196:144: note: 'sprintf' output between 2 and 5100 bytes into a destination of size 2550
source/FORMAT/CIFParserParser.y:195:139: warning: '%s' directive writing up to 2549 bytes into a region of size between 1 and 2550 [-Wformat-overflow=]
source/FORMAT/CIFParserParser.y:195:124: note: 'sprintf' output between 1 and 5099 bytes into a destination of size 2550
source/FORMAT/CIFParserParser.y:194:139: warning: '%s' directive writing up to 2549 bytes into a region of size between 1 and 2550 [-Wformat-overflow=]
source/FORMAT/CIFParserParser.y:194:124: note: 'sprintf' output between 1 and 7648 bytes into a destination of size 2550
[ 23%] Building CXX object CMakeFiles/BALL.dir/source/FORMAT/CIFParserLexer.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/FORMAT/CIFParserLexer.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/FORMAT/CIFParserLexer.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/molecule.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/CIFFile.h:17,
                 from source/FORMAT/CIFParserLexer.l:2:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/molecule.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/CIFFile.h:17,
                 from source/FORMAT/CIFParserLexer.l:2:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/molecule.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/CIFFile.h:17,
                 from source/FORMAT/CIFParserLexer.l:2:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/molecule.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/CIFFile.h:17,
                 from source/FORMAT/CIFParserLexer.l:2:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/molecule.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/CIFFile.h:17,
                 from source/FORMAT/CIFParserLexer.l:2:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/molecule.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/CIFFile.h:17,
                 from source/FORMAT/CIFParserLexer.l:2:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/FORMAT/CIFParserLexer.C: At global scope:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/FORMAT/CIFParserLexer.C:2176:17: warning: 'void yyunput(int, char*)' defined but not used [-Wunused-function]
 2176 |     static void yyunput (int c, char * yy_bp )
      |                 ^~~~~~~
source/FORMAT/CIFParserLexer.l: In function 'int CIFParserlex()':
source/FORMAT/CIFParserLexer.l:223:10: warning: 'char* strncpy(char*, const char*, size_t)' output may be truncated copying 2550 bytes from a string of length 8191 [-Wstringop-truncation]
source/FORMAT/CIFParserLexer.l:207:10: warning: 'char* strncpy(char*, const char*, size_t)' output may be truncated copying 2550 bytes from a string of length 8191 [-Wstringop-truncation]
source/FORMAT/CIFParserLexer.l:200:10: warning: 'char* strncpy(char*, const char*, size_t)' output may be truncated copying 2550 bytes from a string of length 8191 [-Wstringop-truncation]
source/FORMAT/CIFParserLexer.l:135:10: warning: 'char* strncpy(char*, const char*, size_t)' output may be truncated copying 2550 bytes from a string of length 8191 [-Wstringop-truncation]
source/FORMAT/CIFParserLexer.l:117:10: warning: 'char* strncpy(char*, const char*, size_t)' output may be truncated copying 2550 bytes from a string of length 8191 [-Wstringop-truncation]
source/FORMAT/CIFParserLexer.l:90:15: warning: 'char* strncpy(char*, const char*, size_t)' output may be truncated copying 2550 bytes from a string of length 8191 [-Wstringop-truncation]
[ 23%] Building CXX object CMakeFiles/BALL.dir/source/FORMAT/GAMESSDatParserParser.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/FORMAT/GAMESSDatParserParser.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/FORMAT/GAMESSDatParserParser.C
[ 23%] Building CXX object CMakeFiles/BALL.dir/source/FORMAT/GAMESSDatParserLexer.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/FORMAT/GAMESSDatParserLexer.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/FORMAT/GAMESSDatParserLexer.C
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/FORMAT/GAMESSDatParserLexer.C:2637:24: warning: 'void yy_fatal_error(const char*)' defined but not used [-Wunused-function]
 2637 | static void yynoreturn yy_fatal_error (const char* msg )
      |                        ^~~~~~~~~~~~~~
[ 23%] Building CXX object CMakeFiles/BALL.dir/source/KERNEL/atom.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/KERNEL/atom.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/atom.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/atom.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/atom.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/atom.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/atom.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/atom.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/atom.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 23%] Building CXX object CMakeFiles/BALL.dir/source/KERNEL/atomContainer.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/KERNEL/atomContainer.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/atomContainer.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/atomContainer.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/atomContainer.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/atomContainer.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/atomContainer.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/atomContainer.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/atomContainer.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/atomContainer.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/atomContainer.C: In member function 'BALL::Size BALL::AtomContainer::countBonds() const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:108:49: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  108 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/atomContainer.C:230:3: note: in expansion of macro 'BALL_FOREACH_BOND'
  230 |   BALL_FOREACH_BOND(*this, atom_it, bond_it)
      |   ^~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/atomContainer.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/atomContainer.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:110:51: warning: implicitly-declared 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  110 |   for (bond_iterator = (*atom_iterator).beginBond(); \
      |                                                   ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/atomContainer.C:230:3: note: in expansion of macro 'BALL_FOREACH_BOND'
  230 |   BALL_FOREACH_BOND(*this, atom_it, bond_it)
      |   ^~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/atomContainer.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:47:15: note: because 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   47 |   BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:24:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   24 |  class ConstRandomAccessIterator
      |        ^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/atomContainer.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/atomContainer.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/atomContainer.C: In member function 'BALL::Size BALL::AtomContainer::countBonds() const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:110:51: note: synthesized method 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' first required here
  110 |   for (bond_iterator = (*atom_iterator).beginBond(); \
      |                                                   ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/atomContainer.C:230:3: note: in expansion of macro 'BALL_FOREACH_BOND'
  230 |   BALL_FOREACH_BOND(*this, atom_it, bond_it)
      |   ^~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/atomContainer.C: In member function 'BALL::Size BALL::AtomContainer::countInterBonds() const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:124:49: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  124 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/atomContainer.C:244:3: note: in expansion of macro 'BALL_FOREACH_INTERBOND'
  244 |   BALL_FOREACH_INTERBOND(*this, atom_it, bond_it)
      |   ^~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/atomContainer.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/atomContainer.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:126:51: warning: implicitly-declared 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  126 |   for (bond_iterator = (*atom_iterator).beginBond(); \
      |                                                   ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/atomContainer.C:244:3: note: in expansion of macro 'BALL_FOREACH_INTERBOND'
  244 |   BALL_FOREACH_INTERBOND(*this, atom_it, bond_it)
      |   ^~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/atomContainer.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:47:15: note: because 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   47 |   BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/atomContainer.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/atomContainer.C: In member function 'BALL::Size BALL::AtomContainer::countIntraBonds() const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:141:49: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  141 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/atomContainer.C:258:3: note: in expansion of macro 'BALL_FOREACH_INTRABOND'
  258 |   BALL_FOREACH_INTRABOND(*this, atom_it, bond_it)
      |   ^~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/atomContainer.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/atomContainer.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:143:51: warning: implicitly-declared 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  143 |   for (bond_iterator = (*atom_iterator).beginBond(); \
      |                                                   ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/atomContainer.C:258:3: note: in expansion of macro 'BALL_FOREACH_INTRABOND'
  258 |   BALL_FOREACH_INTRABOND(*this, atom_it, bond_it)
      |   ^~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/atomContainer.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:47:15: note: because 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   47 |   BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/atomContainer.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/atomContainer.C: In member function 'bool BALL::AtomContainer::applyInterBond(BALL::UnaryProcessor<BALL::Bond>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:124:49: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  124 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/atomContainer.C:460:3: note: in expansion of macro 'BALL_FOREACH_INTERBOND'
  460 |   BALL_FOREACH_INTERBOND(*this, atom_it, bond_it)
      |   ^~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/atomContainer.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/atomContainer.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/atomContainer.C: In member function 'bool BALL::AtomContainer::applyInterBond(BALL::UnaryProcessor<BALL::Bond>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:124:49: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' first required here
  124 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/atomContainer.C:460:3: note: in expansion of macro 'BALL_FOREACH_INTERBOND'
  460 |   BALL_FOREACH_INTERBOND(*this, atom_it, bond_it)
      |   ^~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:126:51: warning: implicitly-declared 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  126 |   for (bond_iterator = (*atom_iterator).beginBond(); \
      |                                                   ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/atomContainer.C:460:3: note: in expansion of macro 'BALL_FOREACH_INTERBOND'
  460 |   BALL_FOREACH_INTERBOND(*this, atom_it, bond_it)
      |   ^~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/atomContainer.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:437:15: note: because 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::RandomAccessIterator<Container, DataType, Position, Traits>::RandomAccessIterator(const BALL::RandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
  437 |   BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:413:8: warning: implicitly-declared 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  413 |  class RandomAccessIterator
      |        ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:47:15: note: because 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   47 |   BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/atomContainer.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/atomContainer.C: In member function 'bool BALL::AtomContainer::applyInterBond(BALL::UnaryProcessor<BALL::Bond>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:126:51: note: synthesized method 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' first required here
  126 |   for (bond_iterator = (*atom_iterator).beginBond(); \
      |                                                   ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/atomContainer.C:460:3: note: in expansion of macro 'BALL_FOREACH_INTERBOND'
  460 |   BALL_FOREACH_INTERBOND(*this, atom_it, bond_it)
      |   ^~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/atomContainer.C: In member function 'bool BALL::AtomContainer::applyIntraBond(BALL::UnaryProcessor<BALL::Bond>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:141:49: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  141 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/atomContainer.C:484:3: note: in expansion of macro 'BALL_FOREACH_INTRABOND'
  484 |   BALL_FOREACH_INTRABOND(*this, atom_it, bond_it)
      |   ^~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/atomContainer.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/atomContainer.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:143:51: warning: implicitly-declared 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  143 |   for (bond_iterator = (*atom_iterator).beginBond(); \
      |                                                   ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/atomContainer.C:484:3: note: in expansion of macro 'BALL_FOREACH_INTRABOND'
  484 |   BALL_FOREACH_INTRABOND(*this, atom_it, bond_it)
      |   ^~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/atomContainer.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:437:15: note: because 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::RandomAccessIterator<Container, DataType, Position, Traits>::RandomAccessIterator(const BALL::RandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
  437 |   BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/atomContainer.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/global.h: In instantiation of 'void BALL::cloneBonds(const AtomContainerType&, AtomContainerType&) [with AtomContainerType = BALL::AtomContainer]':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/atomContainer.C:91:42:   required from here
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/global.h:79:19: warning: implicitly-declared 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   79 |    for (bond_iter = atom_iter_a->beginBond(); bond_iter != atom_iter_a->endBond(); ++bond_iter)
      |         ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/atomContainer.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:47:15: note: because 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   47 |   BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~
[ 23%] Building CXX object CMakeFiles/BALL.dir/source/KERNEL/bond.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/KERNEL/bond.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/bond.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/bond.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/bond.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/bond.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/bond.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/bond.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/bond.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 23%] Building CXX object CMakeFiles/BALL.dir/source/KERNEL/chain.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/KERNEL/chain.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/chain.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chain.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/chain.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chain.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/chain.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chain.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/chain.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chain.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/chain.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chain.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/chain.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chain.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/chain.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 23%] Building CXX object CMakeFiles/BALL.dir/source/KERNEL/expression.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/KERNEL/expression.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/expression.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/standardPredicates.h:19,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/expression.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/expressionPredicate.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/expressionTree.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/expressionParser.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/expression.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/expression.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/standardPredicates.h:19,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/expression.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/expressionPredicate.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/expressionTree.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/expressionParser.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/expression.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/expression.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/standardPredicates.h:19,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/expression.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/expressionPredicate.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/expressionTree.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/expressionParser.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/expression.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/expression.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 23%] Building CXX object CMakeFiles/BALL.dir/source/KERNEL/expressionPredicate.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/KERNEL/expressionPredicate.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/expressionPredicate.C
[ 23%] Building CXX object CMakeFiles/BALL.dir/source/KERNEL/expressionTree.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/KERNEL/expressionTree.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/expressionTree.C
[ 23%] Building CXX object CMakeFiles/BALL.dir/source/KERNEL/expressionParser.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/KERNEL/expressionParser.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/expressionParser.C
[ 23%] Building CXX object CMakeFiles/BALL.dir/source/KERNEL/extractors.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/KERNEL/extractors.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/extractors.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/extractors.C:13:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/expressionPredicate.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/expressionTree.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/expressionParser.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/expression.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/extractors.C:12:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/extractors.C:13:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/expressionPredicate.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/expressionTree.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/expressionParser.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/expression.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/extractors.C:12:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/extractors.C:13:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/expressionPredicate.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/expressionTree.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/expressionParser.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/expression.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/extractors.C:12:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 23%] Building CXX object CMakeFiles/BALL.dir/source/KERNEL/fragment.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/KERNEL/fragment.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/fragment.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/fragment.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/fragment.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/fragment.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/fragment.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/fragment.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/fragment.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 23%] Building CXX object CMakeFiles/BALL.dir/source/KERNEL/global.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/KERNEL/global.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/global.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/global.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/global.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/global.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/global.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/global.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/global.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/global.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/global.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/global.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/global.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/global.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/global.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 23%] Building CXX object CMakeFiles/BALL.dir/source/KERNEL/molecularInteractions.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/KERNEL/molecularInteractions.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/molecularInteractions.C
[ 23%] Building CXX object CMakeFiles/BALL.dir/source/KERNEL/molecule.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/KERNEL/molecule.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/molecule.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/molecule.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/molecule.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/molecule.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/molecule.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/molecule.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/molecule.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/molecule.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/molecule.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/molecule.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/molecule.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/molecule.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/molecule.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 23%] Building CXX object CMakeFiles/BALL.dir/source/KERNEL/nucleicAcid.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/KERNEL/nucleicAcid.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/nucleicAcid.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/molecule.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/nucleicAcid.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/nucleicAcid.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/molecule.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/nucleicAcid.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/nucleicAcid.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/molecule.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/nucleicAcid.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/nucleicAcid.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/molecule.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/nucleicAcid.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/nucleicAcid.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/molecule.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/nucleicAcid.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/nucleicAcid.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/molecule.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/nucleicAcid.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/nucleicAcid.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 23%] Building CXX object CMakeFiles/BALL.dir/source/KERNEL/nucleotide.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/KERNEL/nucleotide.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/nucleotide.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/nucleotide.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/nucleotide.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/nucleotide.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/nucleotide.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/nucleotide.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/nucleotide.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/nucleotide.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/nucleotide.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/nucleotide.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/nucleotide.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/nucleotide.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/nucleotide.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 23%] Building CXX object CMakeFiles/BALL.dir/source/KERNEL/PDBAtom.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/KERNEL/PDBAtom.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/PDBAtom.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chain.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/PDBAtom.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/PDBAtom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/PDBAtom.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chain.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/PDBAtom.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/PDBAtom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/PDBAtom.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chain.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/PDBAtom.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/PDBAtom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/PDBAtom.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 23%] Building CXX object CMakeFiles/BALL.dir/source/KERNEL/predicate.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/KERNEL/predicate.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/predicate.C
[ 23%] Building CXX object CMakeFiles/BALL.dir/source/KERNEL/protein.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/KERNEL/protein.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/protein.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chain.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chainIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/protein.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/protein.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chain.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chainIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/protein.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/protein.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chain.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chainIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/protein.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/protein.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chain.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chainIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/protein.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/protein.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chain.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chainIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/protein.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/protein.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chain.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chainIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/protein.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/protein.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 23%] Building CXX object CMakeFiles/BALL.dir/source/KERNEL/PTE.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/KERNEL/PTE.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/PTE.C
[ 23%] Building CXX object CMakeFiles/BALL.dir/source/KERNEL/residue.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/KERNEL/residue.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/residue.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/residue.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/residue.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/residue.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/residue.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/residue.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/residue.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/residue.C: In member function 'BALL::Angle BALL::Residue::getTorsionPsi() const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/residue.C:135:25: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  135 |     for (it = beginAtom(); +it; ++it)
      |                         ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/residue.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/residue.C:143:31: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  143 |     for (it = next->beginAtom(); +it; ++it)
      |                               ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/residue.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/residue.C: In member function 'BALL::Angle BALL::Residue::getTorsionPhi() const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/residue.C:199:25: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  199 |     for (it = beginAtom(); +it; ++it)
      |                         ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/residue.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/residue.C:207:35: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  207 |     for (it = previous->beginAtom(); +it; ++it)
      |                                   ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/residue.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/residue.C: In member function 'BALL::Angle BALL::Residue::getTorsionOmega() const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/residue.C:262:25: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |     for (it = beginAtom(); +it; ++it)
      |                         ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/residue.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/residue.C:270:31: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  270 |     for (it = next->beginAtom(); +it; ++it)
      |                               ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/residue.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
[ 28%] Building CXX object CMakeFiles/BALL.dir/source/KERNEL/secondaryStructure.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/KERNEL/secondaryStructure.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/secondaryStructure.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/secondaryStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/secondaryStructure.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/secondaryStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/secondaryStructure.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/secondaryStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/secondaryStructure.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/secondaryStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/secondaryStructure.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/secondaryStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/secondaryStructure.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/secondaryStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/secondaryStructure.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 28%] Building CXX object CMakeFiles/BALL.dir/source/KERNEL/selector.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/KERNEL/selector.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/selector.C
[ 28%] Building CXX object CMakeFiles/BALL.dir/source/KERNEL/standardPredicates.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/KERNEL/standardPredicates.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/standardPredicates.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/standardPredicates.h:19,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/standardPredicates.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/standardPredicates.h:19,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/standardPredicates.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/standardPredicates.h:19,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/standardPredicates.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/standardPredicates.h:19,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/standardPredicates.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/standardPredicates.h:19,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/standardPredicates.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/standardPredicates.h:19,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/standardPredicates.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 28%] Building CXX object CMakeFiles/BALL.dir/source/KERNEL/system.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/KERNEL/system.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/system.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/system.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/system.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/system.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/system.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/system.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/system.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 28%] Building CXX object CMakeFiles/BALL.dir/source/KERNEL/expressionParserParser.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/KERNEL/expressionParserParser.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/KERNEL/expressionParserParser.C
source/KERNEL/expressionParserParser.y:11:2: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
source/KERNEL/expressionParserParser.y:126:2: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
[ 28%] Building CXX object CMakeFiles/BALL.dir/source/KERNEL/expressionParserLexer.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/KERNEL/expressionParserLexer.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/KERNEL/expressionParserLexer.C
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/KERNEL/expressionParserLexer.C:1845:24: warning: 'void yy_fatal_error(const char*)' defined but not used [-Wunused-function]
 1845 | static void yynoreturn yy_fatal_error (const char* msg )
      |                        ^~~~~~~~~~~~~~
[ 28%] Building CXX object CMakeFiles/BALL.dir/source/MATHS/analyticalGeometry.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/MATHS/analyticalGeometry.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MATHS/analyticalGeometry.C
[ 28%] Building CXX object CMakeFiles/BALL.dir/source/MATHS/angle.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/MATHS/angle.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MATHS/angle.C
[ 28%] Building CXX object CMakeFiles/BALL.dir/source/MATHS/box3.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/MATHS/box3.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MATHS/box3.C
[ 28%] Building CXX object CMakeFiles/BALL.dir/source/MATHS/circle3.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/MATHS/circle3.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MATHS/circle3.C
[ 28%] Building CXX object CMakeFiles/BALL.dir/source/MATHS/cubicSpline1D.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/MATHS/cubicSpline1D.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MATHS/cubicSpline1D.C
[ 28%] Building CXX object CMakeFiles/BALL.dir/source/MATHS/cubicSpline2D.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/MATHS/cubicSpline2D.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MATHS/cubicSpline2D.C
[ 28%] Building CXX object CMakeFiles/BALL.dir/source/MATHS/function.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/MATHS/function.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MATHS/function.C
[ 28%] Building CXX object CMakeFiles/BALL.dir/source/MATHS/line3.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/MATHS/line3.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MATHS/line3.C
[ 28%] Building CXX object CMakeFiles/BALL.dir/source/MATHS/matrix44.C.o
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/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/MATHS/parsedFunctionLexer.C:1869:24: warning: 'void yy_fatal_error(const char*)' defined but not used [-Wunused-function]
 1869 | static void yynoreturn yy_fatal_error (const char* msg )
      |                        ^~~~~~~~~~~~~~
[ 33%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/AMBER/amber.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/MOLMEC/AMBER/amber.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/AMBER/amber.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceField.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/AMBER/amber.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/AMBER/amber.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceField.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/AMBER/amber.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/AMBER/amber.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceField.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/AMBER/amber.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/AMBER/amber.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceField.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/AMBER/amber.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/AMBER/amber.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceField.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/AMBER/amber.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/AMBER/amber.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceField.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/AMBER/amber.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/AMBER/amber.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/AMBER/amberTorsion.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/AMBER/amber.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/PARAMETER/cosineTorsion.h: In member function 'void BALL::CosineTorsion::Values::set(const BALL::CosineTorsion::Values&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/PARAMETER/cosineTorsion.h:105:28: warning: implicitly-declared 'BALL::CosineTorsion::SingleValues& BALL::CosineTorsion::SingleValues::operator=(const BALL::CosineTorsion::SingleValues&)' is deprecated [-Wdeprecated-copy]
  105 |      values[i] = v.values[i];
      |                            ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/PARAMETER/cosineTorsion.h:42:4: note: because 'BALL::CosineTorsion::SingleValues' has user-provided 'BALL::CosineTorsion::SingleValues::SingleValues(const BALL::CosineTorsion::SingleValues&)'
   42 |    SingleValues(const SingleValues& v)
      |    ^~~~~~~~~~~~
[ 33%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/AMBER/amberBend.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/MOLMEC/AMBER/amberBend.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/AMBER/amberBend.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/moleculeIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:24,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/bendComponent.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/AMBER/amberBend.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/AMBER/amberBend.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/bendComponent.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/AMBER/amberBend.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/AMBER/amberBend.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/moleculeIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:24,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/bendComponent.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/AMBER/amberBend.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/AMBER/amberBend.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/bendComponent.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/AMBER/amberBend.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/AMBER/amberBend.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/moleculeIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:24,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/bendComponent.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/AMBER/amberBend.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/AMBER/amberBend.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/bendComponent.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/AMBER/amberBend.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/AMBER/amberBend.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/AMBER/amberBend.C: In member function 'virtual bool BALL::AmberBend::setup()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/AMBER/amberBend.C:84:37: warning: implicitly-declared 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   84 |    for (it2 = (*atom_it)->beginBond(); +it2 ; ++it2)
      |                                     ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/bendComponent.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/AMBER/amberBend.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/AMBER/amberBend.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:437:15: note: because 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::RandomAccessIterator<Container, DataType, Position, Traits>::RandomAccessIterator(const BALL::RandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
  437 |   BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:413:8: warning: implicitly-declared 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  413 |  class RandomAccessIterator
      |        ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:47:15: note: because 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   47 |   BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:24:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   24 |  class ConstRandomAccessIterator
      |        ^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/bendComponent.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/AMBER/amberBend.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/AMBER/amberBend.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/bendComponent.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/AMBER/amberBend.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/AMBER/amberBend.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:413:8: note: synthesized method 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' first required here
  413 |  class RandomAccessIterator
      |        ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/AMBER/amberBend.C: In member function 'virtual bool BALL::AmberBend::setup()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/AMBER/amberBend.C:84:37: note: synthesized method 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' first required here
   84 |    for (it2 = (*atom_it)->beginBond(); +it2 ; ++it2)
      |                                     ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/AMBER/amberBend.C:87:16: warning: implicitly-declared 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   87 |     for (it1 = it2, ++it1; +it1 ; ++it1)
      |                ^~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/bendComponent.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/AMBER/amberBend.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/AMBER/amberBend.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:437:15: note: because 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::RandomAccessIterator<Container, DataType, Position, Traits>::RandomAccessIterator(const BALL::RandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
  437 |   BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~
[ 33%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/AMBER/amberNonBonded.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/MOLMEC/AMBER/amberNonBonded.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/AMBER/amberNonBonded.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/moleculeIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:24,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/AMBER/amberNonBonded.h:23,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/AMBER/amberNonBonded.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/parameterSection.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/PARAMETER/lennardJones.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/AMBER/amberNonBonded.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/AMBER/amberNonBonded.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/moleculeIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:24,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/AMBER/amberNonBonded.h:23,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/AMBER/amberNonBonded.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/parameterSection.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/PARAMETER/lennardJones.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/AMBER/amberNonBonded.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/AMBER/amberNonBonded.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/moleculeIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:24,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/AMBER/amberNonBonded.h:23,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/AMBER/amberNonBonded.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/parameterSection.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/PARAMETER/lennardJones.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/AMBER/amberNonBonded.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/AMBER/amberNonBonded.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/AMBER/amberNonBonded.C: In member function 'const BALL::AmberNonBonded& BALL::AmberNonBonded::operator=(const BALL::AmberNonBonded&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/AMBER/amberNonBonded.C:127:33: warning: implicitly-declared 'BALL::ForceFieldComponent& BALL::ForceFieldComponent::operator=(const BALL::ForceFieldComponent&)' is deprecated [-Wdeprecated-copy]
  127 |   ForceFieldComponent::operator = (anb);
      |                                 ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/AMBER/amberNonBonded.h:23,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/AMBER/amberNonBonded.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:61:3: note: because 'BALL::ForceFieldComponent' has user-provided 'BALL::ForceFieldComponent::ForceFieldComponent(const BALL::ForceFieldComponent&)'
   61 |   ForceFieldComponent(const ForceFieldComponent& force_field_component);
      |   ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h: In member function 'BALL::ForceFieldComponent& BALL::ForceFieldComponent::operator=(const BALL::ForceFieldComponent&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:34:20: warning: implicitly-declared 'BALL::ScoringComponent& BALL::ScoringComponent::operator=(const BALL::ScoringComponent&)' is deprecated [-Wdeprecated-copy]
   34 |  class BALL_EXPORT ForceFieldComponent : public ScoringComponent
      |                    ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:24,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/AMBER/amberNonBonded.h:23,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/AMBER/amberNonBonded.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:26:4: note: because 'BALL::ScoringComponent' has user-provided 'BALL::ScoringComponent::ScoringComponent(const BALL::ScoringComponent&)'
   26 |    ScoringComponent(const ScoringComponent& sc);
      |    ^~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/AMBER/amberNonBonded.C: In member function 'const BALL::AmberNonBonded& BALL::AmberNonBonded::operator=(const BALL::AmberNonBonded&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/AMBER/amberNonBonded.C:127:33: note: synthesized method 'BALL::ForceFieldComponent& BALL::ForceFieldComponent::operator=(const BALL::ForceFieldComponent&)' first required here
  127 |   ForceFieldComponent::operator = (anb);
      |                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/AMBER/amberNonBonded.C:127:39: warning: implicitly-declared 'BALL::ForceFieldComponent& BALL::ForceFieldComponent::operator=(const BALL::ForceFieldComponent&)' is deprecated [-Wdeprecated-copy]
  127 |   ForceFieldComponent::operator = (anb);
      |                                       ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/AMBER/amberNonBonded.h:23,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/AMBER/amberNonBonded.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:61:3: note: because 'BALL::ForceFieldComponent' has user-provided 'BALL::ForceFieldComponent::ForceFieldComponent(const BALL::ForceFieldComponent&)'
   61 |   ForceFieldComponent(const ForceFieldComponent& force_field_component);
      |   ^~~~~~~~~~~~~~~~~~~
[ 33%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/AMBER/amberStretch.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/MOLMEC/AMBER/amberStretch.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/AMBER/amberStretch.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/moleculeIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:24,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/stretchComponent.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/AMBER/amberStretch.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/AMBER/amberStretch.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/stretchComponent.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/AMBER/amberStretch.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/AMBER/amberStretch.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/moleculeIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:24,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/stretchComponent.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/AMBER/amberStretch.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/AMBER/amberStretch.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/stretchComponent.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/AMBER/amberStretch.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/AMBER/amberStretch.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/moleculeIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:24,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/stretchComponent.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/AMBER/amberStretch.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/AMBER/amberStretch.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/stretchComponent.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/AMBER/amberStretch.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/AMBER/amberStretch.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 33%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/AMBER/amberTorsion.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/MOLMEC/AMBER/amberTorsion.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/AMBER/amberTorsion.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/AMBER/amberTorsion.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/AMBER/amberTorsion.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/PARAMETER/cosineTorsion.h: In member function 'void BALL::CosineTorsion::Values::set(const BALL::CosineTorsion::Values&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/PARAMETER/cosineTorsion.h:105:28: warning: implicitly-declared 'BALL::CosineTorsion::SingleValues& BALL::CosineTorsion::SingleValues::operator=(const BALL::CosineTorsion::SingleValues&)' is deprecated [-Wdeprecated-copy]
  105 |      values[i] = v.values[i];
      |                            ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/PARAMETER/cosineTorsion.h:42:4: note: because 'BALL::CosineTorsion::SingleValues' has user-provided 'BALL::CosineTorsion::SingleValues::SingleValues(const BALL::CosineTorsion::SingleValues&)'
   42 |    SingleValues(const SingleValues& v)
      |    ^~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/moleculeIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:24,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/AMBER/amberTorsion.h:19,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/AMBER/amberTorsion.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/parameterSection.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/PARAMETER/cosineTorsion.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/AMBER/amberTorsion.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/AMBER/amberTorsion.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/moleculeIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:24,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/AMBER/amberTorsion.h:19,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/AMBER/amberTorsion.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/parameterSection.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/PARAMETER/cosineTorsion.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/AMBER/amberTorsion.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/AMBER/amberTorsion.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/moleculeIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:24,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/AMBER/amberTorsion.h:19,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/AMBER/amberTorsion.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/parameterSection.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/PARAMETER/cosineTorsion.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/AMBER/amberTorsion.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/AMBER/amberTorsion.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/AMBER/amberTorsion.C: In member function 'virtual bool BALL::AmberTorsion::setup()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/AMBER/amberTorsion.C:115:37: warning: implicitly-declared 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  115 |    for (it1 = (*atom_it)->beginBond(); +it1 ; ++ it1)
      |                                     ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/PARAMETER/atomTypes.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/PARAMETER/cosineTorsion.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/AMBER/amberTorsion.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/AMBER/amberTorsion.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:437:15: note: because 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::RandomAccessIterator<Container, DataType, Position, Traits>::RandomAccessIterator(const BALL::RandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
  437 |   BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:413:8: warning: implicitly-declared 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  413 |  class RandomAccessIterator
      |        ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:47:15: note: because 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   47 |   BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:24:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   24 |  class ConstRandomAccessIterator
      |        ^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/parameterSection.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/PARAMETER/cosineTorsion.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/AMBER/amberTorsion.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/AMBER/amberTorsion.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/PARAMETER/atomTypes.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/PARAMETER/cosineTorsion.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/AMBER/amberTorsion.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/AMBER/amberTorsion.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:413:8: note: synthesized method 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' first required here
  413 |  class RandomAccessIterator
      |        ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/AMBER/amberTorsion.C: In member function 'virtual bool BALL::AmberTorsion::setup()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/AMBER/amberTorsion.C:115:37: note: synthesized method 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' first required here
  115 |    for (it1 = (*atom_it)->beginBond(); +it1 ; ++ it1)
      |                                     ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/AMBER/amberTorsion.C:124:39: warning: implicitly-declared 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  124 |      for (it2 = (*atom_it)->beginBond(); +it2 ; ++it2)
      |                                       ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/PARAMETER/atomTypes.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/PARAMETER/cosineTorsion.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/AMBER/amberTorsion.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/AMBER/amberTorsion.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:437:15: note: because 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::RandomAccessIterator<Container, DataType, Position, Traits>::RandomAccessIterator(const BALL::RandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
  437 |   BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/AMBER/amberTorsion.C:139:70: warning: implicitly-declared 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  139 |        for (it3 = const_cast<Atom*>(it1->getSecondAtom())->beginBond(); +it3 ; ++it3)
      |                                                                      ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/PARAMETER/atomTypes.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/PARAMETER/cosineTorsion.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/AMBER/amberTorsion.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/AMBER/amberTorsion.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:437:15: note: because 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::RandomAccessIterator<Container, DataType, Position, Traits>::RandomAccessIterator(const BALL::RandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
  437 |   BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/AMBER/amberTorsion.C:186:41: warning: implicitly-declared 'BALL::CosineTorsion::SingleValues& BALL::CosineTorsion::SingleValues::operator=(const BALL::CosineTorsion::SingleValues&)' is deprecated [-Wdeprecated-copy]
  186 |             tmp.values = values.values[j];
      |                                         ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/AMBER/amberTorsion.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/AMBER/amberTorsion.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/PARAMETER/cosineTorsion.h:42:4: note: because 'BALL::CosineTorsion::SingleValues' has user-provided 'BALL::CosineTorsion::SingleValues::SingleValues(const BALL::CosineTorsion::SingleValues&)'
   42 |    SingleValues(const SingleValues& v)
      |    ^~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/AMBER/amberTorsion.C:296:39: warning: implicitly-declared 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  296 |      for (it1 = (*atom_it)->beginBond(); +it1 ; ++ it1)
      |                                       ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/PARAMETER/atomTypes.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/PARAMETER/cosineTorsion.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/AMBER/amberTorsion.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/AMBER/amberTorsion.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:437:15: note: because 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::RandomAccessIterator<Container, DataType, Position, Traits>::RandomAccessIterator(const BALL::RandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
  437 |   BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/AMBER/amberTorsion.C:301:18: warning: implicitly-declared 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  301 |       for (it2 = it1, ++it2; +it2 ; it2++)
      |                  ^~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/PARAMETER/atomTypes.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/PARAMETER/cosineTorsion.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/AMBER/amberTorsion.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/AMBER/amberTorsion.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:437:15: note: because 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::RandomAccessIterator<Container, DataType, Position, Traits>::RandomAccessIterator(const BALL::RandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
  437 |   BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/AMBER/amberTorsion.C:305:19: warning: implicitly-declared 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  305 |        for (it3 = it2, ++it3; +it3 ; it3++)
      |                   ^~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/PARAMETER/atomTypes.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/PARAMETER/cosineTorsion.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/AMBER/amberTorsion.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/AMBER/amberTorsion.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:437:15: note: because 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::RandomAccessIterator<Container, DataType, Position, Traits>::RandomAccessIterator(const BALL::RandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
  437 |   BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/AMBER/amberTorsion.C:362:40: warning: implicitly-declared 'BALL::CosineTorsion::SingleValues& BALL::CosineTorsion::SingleValues::operator=(const BALL::CosineTorsion::SingleValues&)' is deprecated [-Wdeprecated-copy]
  362 |            tmp.values = values.values[j];
      |                                        ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/AMBER/amberTorsion.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/AMBER/amberTorsion.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/PARAMETER/cosineTorsion.h:42:4: note: because 'BALL::CosineTorsion::SingleValues' has user-provided 'BALL::CosineTorsion::SingleValues::SingleValues(const BALL::CosineTorsion::SingleValues&)'
   42 |    SingleValues(const SingleValues& v)
      |    ^~~~~~~~~~~~
[ 33%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/AMBER/GAFFTypeProcessor.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/MOLMEC/AMBER/GAFFTypeProcessor.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/AMBER/GAFFTypeProcessor.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/molecule.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/AMBER/GAFFTypeProcessor.h:29,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/AMBER/GAFFTypeProcessor.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/AMBER/GAFFTypeProcessor.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/AMBER/GAFFTypeProcessor.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/molecule.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/AMBER/GAFFTypeProcessor.h:29,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/AMBER/GAFFTypeProcessor.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/AMBER/GAFFTypeProcessor.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/AMBER/GAFFTypeProcessor.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/molecule.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/AMBER/GAFFTypeProcessor.h:29,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/AMBER/GAFFTypeProcessor.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/AMBER/GAFFTypeProcessor.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/AMBER/GAFFTypeProcessor.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/AMBER/GAFFTypeProcessor.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/AMBER/GAFFTypeProcessor.C: In member function 'void BALL::GAFFTypeProcessor::annotateBondTypes_()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:108:49: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  108 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/AMBER/GAFFTypeProcessor.C:289:3: note: in expansion of macro 'BALL_FOREACH_BOND'
  289 |   BALL_FOREACH_BOND(*current_molecule_, a_it, b_it)
      |   ^~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/AMBER/GAFFTypeProcessor.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/AMBER/GAFFTypeProcessor.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/AMBER/GAFFTypeProcessor.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/AMBER/GAFFTypeProcessor.C: In member function 'void BALL::GAFFTypeProcessor::annotateBondTypes_()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:108:49: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' first required here
  108 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/AMBER/GAFFTypeProcessor.C:289:3: note: in expansion of macro 'BALL_FOREACH_BOND'
  289 |   BALL_FOREACH_BOND(*current_molecule_, a_it, b_it)
      |   ^~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:110:51: warning: implicitly-declared 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  110 |   for (bond_iterator = (*atom_iterator).beginBond(); \
      |                                                   ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/AMBER/GAFFTypeProcessor.C:289:3: note: in expansion of macro 'BALL_FOREACH_BOND'
  289 |   BALL_FOREACH_BOND(*current_molecule_, a_it, b_it)
      |   ^~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/AMBER/GAFFCESParser.h:8,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/AMBER/GAFFTypeProcessor.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/AMBER/GAFFTypeProcessor.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:437:15: note: because 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::RandomAccessIterator<Container, DataType, Position, Traits>::RandomAccessIterator(const BALL::RandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
  437 |   BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:413:8: warning: implicitly-declared 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  413 |  class RandomAccessIterator
      |        ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:47:15: note: because 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   47 |   BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:24:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   24 |  class ConstRandomAccessIterator
      |        ^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/AMBER/GAFFTypeProcessor.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/AMBER/GAFFTypeProcessor.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/AMBER/GAFFCESParser.h:8,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/AMBER/GAFFTypeProcessor.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/AMBER/GAFFTypeProcessor.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:413:8: note: synthesized method 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' first required here
  413 |  class RandomAccessIterator
      |        ^~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/AMBER/GAFFTypeProcessor.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/AMBER/GAFFTypeProcessor.C: In member function 'void BALL::GAFFTypeProcessor::annotateBondTypes_()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:110:51: note: synthesized method 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' first required here
  110 |   for (bond_iterator = (*atom_iterator).beginBond(); \
      |                                                   ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/AMBER/GAFFTypeProcessor.C:289:3: note: in expansion of macro 'BALL_FOREACH_BOND'
  289 |   BALL_FOREACH_BOND(*current_molecule_, a_it, b_it)
      |   ^~~~~~~~~~~~~~~~~
[ 33%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/AMBER/GAFFCESParser.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/MOLMEC/AMBER/GAFFCESParser.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/AMBER/GAFFCESParser.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/AMBER/GAFFCESParser.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/AMBER/GAFFCESParser.h:8,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/AMBER/GAFFCESParser.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/AMBER/GAFFCESParser.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/AMBER/GAFFCESParser.h:8,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/AMBER/GAFFCESParser.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/AMBER/GAFFCESParser.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/AMBER/GAFFCESParser.h:8,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/AMBER/GAFFCESParser.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/AMBER/GAFFCESParser.C: In member function 'bool BALL::GAFFCESParser::APSMatcher::hasBond_(BALL::Atom*, BALL::Atom*, int, int)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/AMBER/GAFFCESParser.C:89:34: warning: implicitly-declared 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   89 |   for (bond_it = atom->beginBond(); +bond_it; ++bond_it)
      |                                  ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/AMBER/GAFFCESParser.h:8,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/AMBER/GAFFCESParser.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:47:15: note: because 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   47 |   BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:24:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   24 |  class ConstRandomAccessIterator
      |        ^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/AMBER/GAFFCESParser.h:8,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/AMBER/GAFFCESParser.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/AMBER/GAFFCESParser.C: In member function 'bool BALL::GAFFCESParser::APSMatcher::hasBond_(BALL::Atom*, BALL::Atom*, int, int)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/AMBER/GAFFCESParser.C:89:34: note: synthesized method 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' first required here
   89 |   for (bond_it = atom->beginBond(); +bond_it; ++bond_it)
      |                                  ^
[ 33%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/AMBER/GAFFCESParserParser.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/MOLMEC/AMBER/GAFFCESParserParser.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/MOLMEC/AMBER/GAFFCESParserParser.C
[ 33%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/AMBER/GAFFCESParserLexer.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/MOLMEC/AMBER/GAFFCESParserLexer.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/MOLMEC/AMBER/GAFFCESParserLexer.C
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/MOLMEC/AMBER/GAFFCESParserLexer.C:1996:24: warning: 'void yy_fatal_error(const char*)' defined but not used [-Wunused-function]
 1996 | static void yynoreturn yy_fatal_error (const char* msg )
      |                        ^~~~~~~~~~~~~~
[ 33%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/CHARMM/charmm.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/MOLMEC/CHARMM/charmm.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/CHARMM/charmm.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceField.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/CHARMM/charmm.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/CHARMM/charmm.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceField.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/CHARMM/charmm.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/CHARMM/charmm.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceField.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/CHARMM/charmm.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/CHARMM/charmm.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceField.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/CHARMM/charmm.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/CHARMM/charmm.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceField.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/CHARMM/charmm.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/CHARMM/charmm.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceField.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/CHARMM/charmm.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/CHARMM/charmm.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/CHARMM/charmmTorsion.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/CHARMM/charmm.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/PARAMETER/cosineTorsion.h: In member function 'void BALL::CosineTorsion::Values::set(const BALL::CosineTorsion::Values&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/PARAMETER/cosineTorsion.h:105:28: warning: implicitly-declared 'BALL::CosineTorsion::SingleValues& BALL::CosineTorsion::SingleValues::operator=(const BALL::CosineTorsion::SingleValues&)' is deprecated [-Wdeprecated-copy]
  105 |      values[i] = v.values[i];
      |                            ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/PARAMETER/cosineTorsion.h:42:4: note: because 'BALL::CosineTorsion::SingleValues' has user-provided 'BALL::CosineTorsion::SingleValues::SingleValues(const BALL::CosineTorsion::SingleValues&)'
   42 |    SingleValues(const SingleValues& v)
      |    ^~~~~~~~~~~~
[ 33%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/CHARMM/charmmBend.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/MOLMEC/CHARMM/charmmBend.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/CHARMM/charmmBend.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/moleculeIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:24,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/bendComponent.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/CHARMM/charmmBend.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/CHARMM/charmmBend.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/bendComponent.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/CHARMM/charmmBend.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/CHARMM/charmmBend.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/moleculeIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:24,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/bendComponent.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/CHARMM/charmmBend.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/CHARMM/charmmBend.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/bendComponent.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/CHARMM/charmmBend.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/CHARMM/charmmBend.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/moleculeIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:24,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/bendComponent.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/CHARMM/charmmBend.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/CHARMM/charmmBend.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/bendComponent.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/CHARMM/charmmBend.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/CHARMM/charmmBend.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/CHARMM/charmmBend.C: In member function 'virtual bool BALL::CharmmBend::setup()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/CHARMM/charmmBend.C:83:37: warning: implicitly-declared 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   83 |    for (it2 = (*atom_it)->beginBond(); +it2 ; ++it2)
      |                                     ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/bendComponent.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/CHARMM/charmmBend.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/CHARMM/charmmBend.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:437:15: note: because 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::RandomAccessIterator<Container, DataType, Position, Traits>::RandomAccessIterator(const BALL::RandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
  437 |   BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:413:8: warning: implicitly-declared 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  413 |  class RandomAccessIterator
      |        ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:47:15: note: because 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   47 |   BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:24:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   24 |  class ConstRandomAccessIterator
      |        ^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/bendComponent.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/CHARMM/charmmBend.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/CHARMM/charmmBend.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/bendComponent.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/CHARMM/charmmBend.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/CHARMM/charmmBend.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:413:8: note: synthesized method 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' first required here
  413 |  class RandomAccessIterator
      |        ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/CHARMM/charmmBend.C: In member function 'virtual bool BALL::CharmmBend::setup()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/CHARMM/charmmBend.C:83:37: note: synthesized method 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' first required here
   83 |    for (it2 = (*atom_it)->beginBond(); +it2 ; ++it2)
      |                                     ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/CHARMM/charmmBend.C:86:16: warning: implicitly-declared 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   86 |     for (it1 = it2, ++it1; +it1 ; ++it1 )
      |                ^~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/bendComponent.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/CHARMM/charmmBend.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/CHARMM/charmmBend.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:437:15: note: because 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::RandomAccessIterator<Container, DataType, Position, Traits>::RandomAccessIterator(const BALL::RandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
  437 |   BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~
[ 33%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/CHARMM/charmmImproperTorsion.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/MOLMEC/CHARMM/charmmImproperTorsion.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/CHARMM/charmmImproperTorsion.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/moleculeIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:24,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/CHARMM/charmmImproperTorsion.h:23,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/CHARMM/charmmImproperTorsion.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/parameterSection.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/PARAMETER/quadraticImproperTorsion.h:12,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/CHARMM/charmmImproperTorsion.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/CHARMM/charmmImproperTorsion.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/moleculeIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:24,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/CHARMM/charmmImproperTorsion.h:23,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/CHARMM/charmmImproperTorsion.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/parameterSection.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/PARAMETER/quadraticImproperTorsion.h:12,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/CHARMM/charmmImproperTorsion.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/CHARMM/charmmImproperTorsion.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/moleculeIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:24,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/CHARMM/charmmImproperTorsion.h:23,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/CHARMM/charmmImproperTorsion.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/parameterSection.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/PARAMETER/quadraticImproperTorsion.h:12,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/CHARMM/charmmImproperTorsion.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/CHARMM/charmmImproperTorsion.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/CHARMM/charmmImproperTorsion.C: In member function 'virtual bool BALL::CharmmImproperTorsion::setup()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/CHARMM/charmmImproperTorsion.C:173:40: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  173 |      for (atom_it = next_it->beginAtom(); +atom_it; ++atom_it)
      |                                        ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/parameterSection.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/PARAMETER/quadraticImproperTorsion.h:12,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/CHARMM/charmmImproperTorsion.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/CHARMM/charmmImproperTorsion.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/CHARMM/charmmImproperTorsion.C: In member function 'virtual bool BALL::CharmmImproperTorsion::setup()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/CHARMM/charmmImproperTorsion.C:173:40: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' first required here
  173 |      for (atom_it = next_it->beginAtom(); +atom_it; ++atom_it)
      |                                        ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/CHARMM/charmmImproperTorsion.C:202:45: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  202 |      for (atom_it = last_residue->beginAtom(); +atom_it; ++atom_it)
      |                                             ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/parameterSection.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/PARAMETER/quadraticImproperTorsion.h:12,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/CHARMM/charmmImproperTorsion.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/CHARMM/charmmImproperTorsion.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/CHARMM/charmmImproperTorsion.C:229:39: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  229 |      for (atom_it = res_it->beginAtom(); (cys_res != 0) && +atom_it; ++atom_it)
      |                                       ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/parameterSection.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/PARAMETER/quadraticImproperTorsion.h:12,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/CHARMM/charmmImproperTorsion.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/CHARMM/charmmImproperTorsion.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/CHARMM/charmmImproperTorsion.C:258:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |       for (atom_it = last_residue->beginAtom(); +atom_it; ++atom_it)
      |                                              ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/parameterSection.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/PARAMETER/quadraticImproperTorsion.h:12,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/CHARMM/charmmImproperTorsion.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/CHARMM/charmmImproperTorsion.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 33%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/CHARMM/charmmNonBonded.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/MOLMEC/CHARMM/charmmNonBonded.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/CHARMM/charmmNonBonded.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/moleculeIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:24,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/CHARMM/charmmNonBonded.h:29,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/CHARMM/charmmNonBonded.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/parameterSection.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/PARAMETER/lennardJones.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/CHARMM/charmmNonBonded.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/CHARMM/charmmNonBonded.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/moleculeIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:24,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/CHARMM/charmmNonBonded.h:29,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/CHARMM/charmmNonBonded.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/parameterSection.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/PARAMETER/lennardJones.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/CHARMM/charmmNonBonded.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/CHARMM/charmmNonBonded.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/moleculeIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:24,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/CHARMM/charmmNonBonded.h:29,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/CHARMM/charmmNonBonded.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/parameterSection.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/PARAMETER/lennardJones.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/CHARMM/charmmNonBonded.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/CHARMM/charmmNonBonded.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/CHARMM/charmmNonBonded.C: In member function 'const BALL::CharmmNonBonded& BALL::CharmmNonBonded::operator=(const BALL::CharmmNonBonded&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/CHARMM/charmmNonBonded.C:137:33: warning: implicitly-declared 'BALL::ForceFieldComponent& BALL::ForceFieldComponent::operator=(const BALL::ForceFieldComponent&)' is deprecated [-Wdeprecated-copy]
  137 |   ForceFieldComponent::operator = (charmm_non_bonded);
      |                                 ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/CHARMM/charmmNonBonded.h:29,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/CHARMM/charmmNonBonded.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:61:3: note: because 'BALL::ForceFieldComponent' has user-provided 'BALL::ForceFieldComponent::ForceFieldComponent(const BALL::ForceFieldComponent&)'
   61 |   ForceFieldComponent(const ForceFieldComponent& force_field_component);
      |   ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h: In member function 'BALL::ForceFieldComponent& BALL::ForceFieldComponent::operator=(const BALL::ForceFieldComponent&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:34:20: warning: implicitly-declared 'BALL::ScoringComponent& BALL::ScoringComponent::operator=(const BALL::ScoringComponent&)' is deprecated [-Wdeprecated-copy]
   34 |  class BALL_EXPORT ForceFieldComponent : public ScoringComponent
      |                    ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:24,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/CHARMM/charmmNonBonded.h:29,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/CHARMM/charmmNonBonded.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:26:4: note: because 'BALL::ScoringComponent' has user-provided 'BALL::ScoringComponent::ScoringComponent(const BALL::ScoringComponent&)'
   26 |    ScoringComponent(const ScoringComponent& sc);
      |    ^~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/CHARMM/charmmNonBonded.C: In member function 'const BALL::CharmmNonBonded& BALL::CharmmNonBonded::operator=(const BALL::CharmmNonBonded&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/CHARMM/charmmNonBonded.C:137:33: note: synthesized method 'BALL::ForceFieldComponent& BALL::ForceFieldComponent::operator=(const BALL::ForceFieldComponent&)' first required here
  137 |   ForceFieldComponent::operator = (charmm_non_bonded);
      |                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/CHARMM/charmmNonBonded.C:137:53: warning: implicitly-declared 'BALL::ForceFieldComponent& BALL::ForceFieldComponent::operator=(const BALL::ForceFieldComponent&)' is deprecated [-Wdeprecated-copy]
  137 |   ForceFieldComponent::operator = (charmm_non_bonded);
      |                                                     ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/CHARMM/charmmNonBonded.h:29,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/CHARMM/charmmNonBonded.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:61:3: note: because 'BALL::ForceFieldComponent' has user-provided 'BALL::ForceFieldComponent::ForceFieldComponent(const BALL::ForceFieldComponent&)'
   61 |   ForceFieldComponent(const ForceFieldComponent& force_field_component);
      |   ^~~~~~~~~~~~~~~~~~~
[ 33%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/CHARMM/charmmStretch.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/MOLMEC/CHARMM/charmmStretch.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/CHARMM/charmmStretch.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/moleculeIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:24,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/stretchComponent.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/CHARMM/charmmStretch.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/CHARMM/charmmStretch.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/stretchComponent.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/CHARMM/charmmStretch.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/CHARMM/charmmStretch.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/moleculeIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:24,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/stretchComponent.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/CHARMM/charmmStretch.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/CHARMM/charmmStretch.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/stretchComponent.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/CHARMM/charmmStretch.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/CHARMM/charmmStretch.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/moleculeIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:24,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/stretchComponent.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/CHARMM/charmmStretch.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/CHARMM/charmmStretch.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/stretchComponent.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/CHARMM/charmmStretch.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/CHARMM/charmmStretch.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/CHARMM/charmmStretch.C: In member function 'virtual bool BALL::CharmmStretch::setup()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/CHARMM/charmmStretch.C:71:47: warning: implicitly-declared 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   71 |    for (bond_iterator = (*atom_it)->beginBond(); +bond_iterator; ++bond_iterator)
      |                                               ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/stretchComponent.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/CHARMM/charmmStretch.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/CHARMM/charmmStretch.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:437:15: note: because 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::RandomAccessIterator<Container, DataType, Position, Traits>::RandomAccessIterator(const BALL::RandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
  437 |   BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:413:8: warning: implicitly-declared 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  413 |  class RandomAccessIterator
      |        ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:47:15: note: because 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   47 |   BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:24:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   24 |  class ConstRandomAccessIterator
      |        ^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/stretchComponent.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/CHARMM/charmmStretch.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/CHARMM/charmmStretch.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/stretchComponent.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/CHARMM/charmmStretch.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/CHARMM/charmmStretch.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:413:8: note: synthesized method 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' first required here
  413 |  class RandomAccessIterator
      |        ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/CHARMM/charmmStretch.C: In member function 'virtual bool BALL::CharmmStretch::setup()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/CHARMM/charmmStretch.C:71:47: note: synthesized method 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' first required here
   71 |    for (bond_iterator = (*atom_it)->beginBond(); +bond_iterator; ++bond_iterator)
      |                                               ^
[ 33%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/CHARMM/charmmTorsion.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/MOLMEC/CHARMM/charmmTorsion.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/CHARMM/charmmTorsion.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/CHARMM/charmmTorsion.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/CHARMM/charmmTorsion.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/PARAMETER/cosineTorsion.h: In member function 'void BALL::CosineTorsion::Values::set(const BALL::CosineTorsion::Values&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/PARAMETER/cosineTorsion.h:105:28: warning: implicitly-declared 'BALL::CosineTorsion::SingleValues& BALL::CosineTorsion::SingleValues::operator=(const BALL::CosineTorsion::SingleValues&)' is deprecated [-Wdeprecated-copy]
  105 |      values[i] = v.values[i];
      |                            ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/PARAMETER/cosineTorsion.h:42:4: note: because 'BALL::CosineTorsion::SingleValues' has user-provided 'BALL::CosineTorsion::SingleValues::SingleValues(const BALL::CosineTorsion::SingleValues&)'
   42 |    SingleValues(const SingleValues& v)
      |    ^~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/moleculeIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:24,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/CHARMM/charmmTorsion.h:23,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/CHARMM/charmmTorsion.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/parameterSection.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/PARAMETER/cosineTorsion.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/CHARMM/charmmTorsion.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/CHARMM/charmmTorsion.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/moleculeIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:24,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/CHARMM/charmmTorsion.h:23,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/CHARMM/charmmTorsion.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/parameterSection.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/PARAMETER/cosineTorsion.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/CHARMM/charmmTorsion.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/CHARMM/charmmTorsion.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/moleculeIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:24,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/CHARMM/charmmTorsion.h:23,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/CHARMM/charmmTorsion.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/parameterSection.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/PARAMETER/cosineTorsion.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/CHARMM/charmmTorsion.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/CHARMM/charmmTorsion.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/CHARMM/charmmTorsion.C: In member function 'virtual bool BALL::CharmmTorsion::setup()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/CHARMM/charmmTorsion.C:131:37: warning: implicitly-declared 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  131 |    for (it1 = (*atom_it)->beginBond(); +it1 ; ++ it1)
      |                                     ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/PARAMETER/atomTypes.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/PARAMETER/cosineTorsion.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/CHARMM/charmmTorsion.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/CHARMM/charmmTorsion.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:437:15: note: because 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::RandomAccessIterator<Container, DataType, Position, Traits>::RandomAccessIterator(const BALL::RandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
  437 |   BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:413:8: warning: implicitly-declared 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  413 |  class RandomAccessIterator
      |        ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:47:15: note: because 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   47 |   BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:24:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   24 |  class ConstRandomAccessIterator
      |        ^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/parameterSection.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/PARAMETER/cosineTorsion.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/CHARMM/charmmTorsion.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/CHARMM/charmmTorsion.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/PARAMETER/atomTypes.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/PARAMETER/cosineTorsion.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/CHARMM/charmmTorsion.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/CHARMM/charmmTorsion.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:413:8: note: synthesized method 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' first required here
  413 |  class RandomAccessIterator
      |        ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/CHARMM/charmmTorsion.C: In member function 'virtual bool BALL::CharmmTorsion::setup()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/CHARMM/charmmTorsion.C:131:37: note: synthesized method 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' first required here
  131 |    for (it1 = (*atom_it)->beginBond(); +it1 ; ++ it1)
      |                                     ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/CHARMM/charmmTorsion.C:140:39: warning: implicitly-declared 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  140 |      for (it2 = (*atom_it)->beginBond(); +it2 ; ++it2)
      |                                       ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/PARAMETER/atomTypes.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/PARAMETER/cosineTorsion.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/CHARMM/charmmTorsion.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/CHARMM/charmmTorsion.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:437:15: note: because 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::RandomAccessIterator<Container, DataType, Position, Traits>::RandomAccessIterator(const BALL::RandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
  437 |   BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/CHARMM/charmmTorsion.C:155:70: warning: implicitly-declared 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  155 |        for (it3 = const_cast<Atom*>(it1->getSecondAtom())->beginBond(); +it3 ; ++it3)
      |                                                                      ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/PARAMETER/atomTypes.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/PARAMETER/cosineTorsion.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/CHARMM/charmmTorsion.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/CHARMM/charmmTorsion.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:437:15: note: because 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::RandomAccessIterator<Container, DataType, Position, Traits>::RandomAccessIterator(const BALL::RandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
  437 |   BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/CHARMM/charmmTorsion.C:198:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  198 |              for (res_it = chain->beginResidue(); +res_it; last_res = &*res_it, ++res_it)
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/parameterSection.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/PARAMETER/cosineTorsion.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/CHARMM/charmmTorsion.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/CHARMM/charmmTorsion.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Residue; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::ResidueIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Residue; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::ResidueIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/CHARMM/charmmTorsion.C: In member function 'virtual bool BALL::CharmmTorsion::setup()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/CHARMM/charmmTorsion.C:198:48: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>&)' first required here
  198 |              for (res_it = chain->beginResidue(); +res_it; last_res = &*res_it, ++res_it)
      |                                                ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/CHARMM/charmmTorsion.C:304:41: warning: implicitly-declared 'BALL::CosineTorsion::SingleValues& BALL::CosineTorsion::SingleValues::operator=(const BALL::CosineTorsion::SingleValues&)' is deprecated [-Wdeprecated-copy]
  304 |             tmp.values = values.values[j];
      |                                         ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/CHARMM/charmmTorsion.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/CHARMM/charmmTorsion.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/PARAMETER/cosineTorsion.h:42:4: note: because 'BALL::CosineTorsion::SingleValues' has user-provided 'BALL::CosineTorsion::SingleValues::SingleValues(const BALL::CosineTorsion::SingleValues&)'
   42 |    SingleValues(const SingleValues& v)
      |    ^~~~~~~~~~~~
[ 33%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/COMMON/assignTypes.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/MOLMEC/COMMON/assignTypes.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/COMMON/assignTypes.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/COMMON/assignTypes.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/parameterSection.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/PARAMETER/atomTypes.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/assignTypes.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/COMMON/assignTypes.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/COMMON/assignTypes.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/parameterSection.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/PARAMETER/atomTypes.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/assignTypes.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/COMMON/assignTypes.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/COMMON/assignTypes.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/parameterSection.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/PARAMETER/atomTypes.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/assignTypes.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/COMMON/assignTypes.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 33%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/COMMON/atomVector.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/MOLMEC/COMMON/atomVector.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/COMMON/atomVector.C
[ 33%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/COMMON/bendComponent.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/MOLMEC/COMMON/bendComponent.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/COMMON/bendComponent.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/moleculeIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:24,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/bendComponent.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/COMMON/bendComponent.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/bendComponent.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/COMMON/bendComponent.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/moleculeIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:24,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/bendComponent.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/COMMON/bendComponent.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/bendComponent.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/COMMON/bendComponent.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/moleculeIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:24,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/bendComponent.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/COMMON/bendComponent.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/bendComponent.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/COMMON/bendComponent.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 33%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/COMMON/chargeRuleProcessor.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/MOLMEC/COMMON/chargeRuleProcessor.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/COMMON/chargeRuleProcessor.C
[ 38%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/COMMON/forceField.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/MOLMEC/COMMON/forceField.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/COMMON/forceField.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceField.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/COMMON/forceField.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceField.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/COMMON/forceField.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceField.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/COMMON/forceField.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceField.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/COMMON/forceField.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceField.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/COMMON/forceField.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceField.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/COMMON/forceField.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/COMMON/forceField.C: In member function 'void BALL::ForceField::collectAtoms_(const BALL::System&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/COMMON/forceField.C:326:36: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  326 |    for (atom_it = system.beginAtom(); +atom_it; ++atom_it)
      |                                    ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceField.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/COMMON/forceField.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
[ 38%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/COMMON/forceFieldComponent.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/MOLMEC/COMMON/forceFieldComponent.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/COMMON/forceFieldComponent.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/moleculeIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:24,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/COMMON/forceFieldComponent.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/COMMON/forceFieldComponent.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/moleculeIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:24,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/COMMON/forceFieldComponent.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/COMMON/forceFieldComponent.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/moleculeIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:24,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/COMMON/forceFieldComponent.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/COMMON/forceFieldComponent.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/COMMON/forceFieldComponent.C: In copy constructor 'BALL::ForceFieldComponent::ForceFieldComponent(const BALL::ForceFieldComponent&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/COMMON/forceFieldComponent.C:34:2: warning: base class 'class BALL::ScoringComponent' should be explicitly initialized in the copy constructor [-Wextra]
   34 |  ForceFieldComponent::ForceFieldComponent(const ForceFieldComponent& force_field_component)
      |  ^~~~~~~~~~~~~~~~~~~
[ 38%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/COMMON/gradient.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/MOLMEC/COMMON/gradient.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/COMMON/gradient.C
[ 38%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/COMMON/periodicBoundary.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/MOLMEC/COMMON/periodicBoundary.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/COMMON/periodicBoundary.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceField.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/COMMON/periodicBoundary.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/periodicBoundary.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/COMMON/periodicBoundary.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceField.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/COMMON/periodicBoundary.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/periodicBoundary.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/COMMON/periodicBoundary.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceField.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/COMMON/periodicBoundary.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/periodicBoundary.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/COMMON/periodicBoundary.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/support.h:28,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/COMMON/periodicBoundary.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h: In instantiation of 'BALL::Index BALL::HashGrid3<Item>::getIndex_(const BALL::HashGridBox3<Item>&) const [with Item = const BALL::Atom*; BALL::Index = int]':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:1667:20:   required from 'void BALL::HashGrid3<Item>::dump(std::ostream&, BALL::Size) const [with Item = const BALL::Atom*; std::ostream = std::basic_ostream<char>; BALL::Size = unsigned int]'
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:1625:7:   required from here
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:1726:46: warning: comparison of integer expressions of different signedness: 'int' and 'BALL::Size' {aka 'unsigned int'} [-Wsign-compare]
 1726 |   if ((&box < &box_[0]) || (&box - &box_[0]  >= getSize()))
      |                            ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~
[ 38%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/COMMON/radiusRuleProcessor.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/MOLMEC/COMMON/radiusRuleProcessor.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/COMMON/radiusRuleProcessor.C
[ 38%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/COMMON/ruleEvaluator.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/MOLMEC/COMMON/ruleEvaluator.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/COMMON/ruleEvaluator.C
[ 38%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/COMMON/ruleProcessor.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/MOLMEC/COMMON/ruleProcessor.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/COMMON/ruleProcessor.C
[ 38%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/COMMON/snapShot.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/MOLMEC/COMMON/snapShot.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/COMMON/snapShot.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/COMMON/snapShot.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/snapShot.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/COMMON/snapShot.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/COMMON/snapShot.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/snapShot.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/COMMON/snapShot.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/COMMON/snapShot.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/snapShot.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/COMMON/snapShot.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 38%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/COMMON/snapShotManager.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/MOLMEC/COMMON/snapShotManager.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/COMMON/snapShotManager.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceField.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/COMMON/snapShotManager.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/snapShot.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/snapShotManager.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/COMMON/snapShotManager.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceField.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/COMMON/snapShotManager.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/snapShot.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/snapShotManager.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/COMMON/snapShotManager.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceField.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/COMMON/snapShotManager.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/snapShot.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/snapShotManager.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/COMMON/snapShotManager.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 38%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/COMMON/support.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/MOLMEC/COMMON/support.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/COMMON/support.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceField.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/support.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/COMMON/support.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/simpleBox3.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/support.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/COMMON/support.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceField.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/support.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/COMMON/support.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/simpleBox3.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/support.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/COMMON/support.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceField.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/support.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/COMMON/support.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/simpleBox3.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/support.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/COMMON/support.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/COMMON/support.C: In function 'BALL::Size BALL::MolmecSupport::addNonOverlappingMolecules(BALL::System&, const BALL::HashGrid3<const BALL::Atom*>&, const BALL::System&, const SimpleBox3&, double)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/COMMON/support.C:496:38: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  496 |     for (atom_it = mol_it->beginAtom(); +atom_it; ++atom_it)
      |                                      ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/simpleBox3.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/support.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/COMMON/support.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/COMMON/support.C: In function 'void BALL::MolmecSupport::adaptWaterBox(BALL::System&, const SimpleBox3&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/COMMON/support.C:652:33: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  652 |     atom_it = mol_it->beginAtom();
      |                                 ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/simpleBox3.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/support.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/COMMON/support.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/COMMON/support.C: In function 'void BALL::MolmecSupport::adaptWaterBox(BALL::System&, const SimpleBox3&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/COMMON/support.C:652:33: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' first required here
  652 |     atom_it = mol_it->beginAtom();
      |                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/COMMON/support.C:701:39: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  701 |      for (atom_it = mol_it->beginAtom(); +atom_it; ++atom_it)
      |                                       ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/simpleBox3.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/support.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/COMMON/support.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/support.h:28,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/COMMON/support.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h: In instantiation of 'BALL::Index BALL::HashGrid3<Item>::getIndex_(const BALL::HashGridBox3<Item>&) const [with Item = BALL::Atom*; BALL::Index = int]':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:1516:17:   required from 'bool BALL::HashGrid3<Item>::getIndices(const BALL::HashGridBox3<Item>&, BALL::Position&, BALL::Position&, BALL::Position&) const [with Item = BALL::Atom*; BALL::Position = unsigned int]'
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/COMMON/support.C:234:39:   required from here
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:1726:46: warning: comparison of integer expressions of different signedness: 'int' and 'BALL::Size' {aka 'unsigned int'} [-Wsign-compare]
 1726 |   if ((&box < &box_[0]) || (&box - &box_[0]  >= getSize()))
      |                            ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/forwardIterator.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashSet.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/simpleBox3.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/support.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/COMMON/support.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/baseIterator.h: In instantiation of 'BALL::BaseIterator<Container, DataType, Position, Traits>& BALL::BaseIterator<Container, DataType, Position, Traits>::operator=(const BALL::BaseIterator<Container, DataType, Position, Traits>&) [with Container = BALL::HashGridBox3<const BALL::Atom*>; DataType = BALL::HashGridBox3<const BALL::Atom*>; Position = unsigned int; Traits = BALL::HashGridBox3<const BALL::Atom*>::BoxIteratorTraits]':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/forwardIterator.h:63:68:   required from 'BALL::ConstForwardIterator<Container, DataType, Position, Traits>& BALL::ConstForwardIterator<Container, DataType, Position, Traits>::operator=(const BALL::ConstForwardIterator<Container, DataType, Position, Traits>&) [with Container = BALL::HashGridBox3<const BALL::Atom*>; DataType = BALL::HashGridBox3<const BALL::Atom*>; Position = unsigned int; Traits = BALL::HashGridBox3<const BALL::Atom*>::BoxIteratorTraits]'
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/COMMON/support.C:450:36:   required from here
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/baseIterator.h:111:12: warning: implicitly-declared 'BALL::HashGridBox3<const BALL::Atom*>::BoxIteratorTraits& BALL::HashGridBox3<const BALL::Atom*>::BoxIteratorTraits::operator=(const BALL::HashGridBox3<const BALL::Atom*>::BoxIteratorTraits&)' is deprecated [-Wdeprecated-copy]
  111 |    traits_ = iterator.traits_;
      |    ~~~~~~~~^~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/support.h:28,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/COMMON/support.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:209:4: note: because 'BALL::HashGridBox3<const BALL::Atom*>::BoxIteratorTraits' has user-provided 'BALL::HashGridBox3<Item>::BoxIteratorTraits::BoxIteratorTraits(const BALL::HashGridBox3<Item>::BoxIteratorTraits&, bool) [with Item = const BALL::Atom*]'
  209 |    BoxIteratorTraits(const BoxIteratorTraits& traits, bool /* deep */ = true)
      |    ^~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h: In instantiation of 'BALL::Index BALL::HashGrid3<Item>::getIndex_(const BALL::HashGridBox3<Item>&) const [with Item = const BALL::Atom*; BALL::Index = int]':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:1516:17:   required from 'bool BALL::HashGrid3<Item>::getIndices(const BALL::HashGridBox3<Item>&, BALL::Position&, BALL::Position&, BALL::Position&) const [with Item = const BALL::Atom*; BALL::Position = unsigned int]'
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/COMMON/support.C:503:62:   required from here
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:1726:46: warning: comparison of integer expressions of different signedness: 'int' and 'BALL::Size' {aka 'unsigned int'} [-Wsign-compare]
 1726 |   if ((&box < &box_[0]) || (&box - &box_[0]  >= getSize()))
      |                            ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~
[ 38%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/COMMON/stretchComponent.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/MOLMEC/COMMON/stretchComponent.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/COMMON/stretchComponent.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/moleculeIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:24,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/stretchComponent.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/COMMON/stretchComponent.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/stretchComponent.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/COMMON/stretchComponent.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/moleculeIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:24,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/stretchComponent.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/COMMON/stretchComponent.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/stretchComponent.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/COMMON/stretchComponent.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/moleculeIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:24,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/stretchComponent.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/COMMON/stretchComponent.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/stretchComponent.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/COMMON/stretchComponent.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 38%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/COMMON/typenameRuleProcessor.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/MOLMEC/COMMON/typenameRuleProcessor.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/COMMON/typenameRuleProcessor.C
[ 38%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/COMMON/typeRuleProcessor.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/MOLMEC/COMMON/typeRuleProcessor.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/COMMON/typeRuleProcessor.C
[ 38%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/MINIMIZATION/energyMinimizer.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/MOLMEC/MINIMIZATION/energyMinimizer.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MINIMIZATION/energyMinimizer.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceField.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MINIMIZATION/energyMinimizer.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MINIMIZATION/energyMinimizer.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MINIMIZATION/energyMinimizer.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceField.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MINIMIZATION/energyMinimizer.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MINIMIZATION/energyMinimizer.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MINIMIZATION/energyMinimizer.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceField.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MINIMIZATION/energyMinimizer.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MINIMIZATION/energyMinimizer.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MINIMIZATION/energyMinimizer.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 38%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/MINIMIZATION/lineSearch.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/MOLMEC/MINIMIZATION/lineSearch.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MINIMIZATION/lineSearch.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceField.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MINIMIZATION/lineSearch.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MINIMIZATION/energyMinimizer.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MINIMIZATION/lineSearch.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceField.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MINIMIZATION/lineSearch.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MINIMIZATION/energyMinimizer.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MINIMIZATION/lineSearch.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceField.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MINIMIZATION/lineSearch.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MINIMIZATION/energyMinimizer.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MINIMIZATION/lineSearch.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 38%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/MINIMIZATION/steepestDescent.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/MOLMEC/MINIMIZATION/steepestDescent.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MINIMIZATION/steepestDescent.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceField.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MINIMIZATION/steepestDescent.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MINIMIZATION/energyMinimizer.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MINIMIZATION/steepestDescent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MINIMIZATION/steepestDescent.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceField.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MINIMIZATION/steepestDescent.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MINIMIZATION/energyMinimizer.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MINIMIZATION/steepestDescent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MINIMIZATION/steepestDescent.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceField.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MINIMIZATION/steepestDescent.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MINIMIZATION/energyMinimizer.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MINIMIZATION/steepestDescent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MINIMIZATION/steepestDescent.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 38%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/MINIMIZATION/strangLBFGS.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/MOLMEC/MINIMIZATION/strangLBFGS.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MINIMIZATION/strangLBFGS.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceField.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MINIMIZATION/strangLBFGS.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MINIMIZATION/energyMinimizer.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MINIMIZATION/strangLBFGS.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MINIMIZATION/strangLBFGS.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceField.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MINIMIZATION/strangLBFGS.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MINIMIZATION/energyMinimizer.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MINIMIZATION/strangLBFGS.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MINIMIZATION/strangLBFGS.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceField.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MINIMIZATION/strangLBFGS.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MINIMIZATION/energyMinimizer.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MINIMIZATION/strangLBFGS.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MINIMIZATION/strangLBFGS.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 38%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/MINIMIZATION/shiftedLVMM.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/MOLMEC/MINIMIZATION/shiftedLVMM.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MINIMIZATION/shiftedLVMM.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceField.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MINIMIZATION/shiftedLVMM.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MINIMIZATION/energyMinimizer.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MINIMIZATION/shiftedLVMM.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MINIMIZATION/shiftedLVMM.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceField.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MINIMIZATION/shiftedLVMM.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MINIMIZATION/energyMinimizer.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MINIMIZATION/shiftedLVMM.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MINIMIZATION/shiftedLVMM.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceField.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MINIMIZATION/shiftedLVMM.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MINIMIZATION/energyMinimizer.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MINIMIZATION/shiftedLVMM.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MINIMIZATION/shiftedLVMM.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 38%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/MINIMIZATION/conjugateGradient.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/MOLMEC/MINIMIZATION/conjugateGradient.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MINIMIZATION/conjugateGradient.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceField.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MINIMIZATION/conjugateGradient.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MINIMIZATION/energyMinimizer.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MINIMIZATION/conjugateGradient.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MINIMIZATION/conjugateGradient.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceField.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MINIMIZATION/conjugateGradient.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MINIMIZATION/energyMinimizer.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MINIMIZATION/conjugateGradient.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MINIMIZATION/conjugateGradient.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceField.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MINIMIZATION/conjugateGradient.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MINIMIZATION/energyMinimizer.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MINIMIZATION/conjugateGradient.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MINIMIZATION/conjugateGradient.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 38%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/MDSIMULATION/molecularDynamics.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/MOLMEC/MDSIMULATION/molecularDynamics.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MDSIMULATION/molecularDynamics.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceField.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MDSIMULATION/molecularDynamics.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MDSIMULATION/molecularDynamics.h:18,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MDSIMULATION/molecularDynamics.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceField.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MDSIMULATION/molecularDynamics.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MDSIMULATION/molecularDynamics.h:18,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MDSIMULATION/molecularDynamics.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceField.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MDSIMULATION/molecularDynamics.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MDSIMULATION/molecularDynamics.h:18,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MDSIMULATION/molecularDynamics.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 38%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/MDSIMULATION/microCanonicalMD.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/MOLMEC/MDSIMULATION/microCanonicalMD.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MDSIMULATION/microCanonicalMD.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceField.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MDSIMULATION/microCanonicalMD.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MDSIMULATION/molecularDynamics.h:18,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MDSIMULATION/microCanonicalMD.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MDSIMULATION/microCanonicalMD.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceField.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MDSIMULATION/microCanonicalMD.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MDSIMULATION/molecularDynamics.h:18,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MDSIMULATION/microCanonicalMD.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MDSIMULATION/microCanonicalMD.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceField.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MDSIMULATION/microCanonicalMD.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MDSIMULATION/molecularDynamics.h:18,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MDSIMULATION/microCanonicalMD.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MDSIMULATION/microCanonicalMD.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 38%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/MDSIMULATION/canonicalMD.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/MOLMEC/MDSIMULATION/canonicalMD.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MDSIMULATION/canonicalMD.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceField.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MDSIMULATION/canonicalMD.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MDSIMULATION/molecularDynamics.h:18,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MDSIMULATION/canonicalMD.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MDSIMULATION/canonicalMD.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceField.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MDSIMULATION/canonicalMD.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MDSIMULATION/molecularDynamics.h:18,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MDSIMULATION/canonicalMD.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MDSIMULATION/canonicalMD.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceField.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MDSIMULATION/canonicalMD.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MDSIMULATION/molecularDynamics.h:18,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MDSIMULATION/canonicalMD.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MDSIMULATION/canonicalMD.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 38%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/MMFF94/MMFF94.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/MOLMEC/MMFF94/MMFF94.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceField.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceField.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceField.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceField.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceField.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceField.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/string.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SYSTEM/path.h:22,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94ParametersBase::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:43:3: note: in expansion of macro 'BALL_CREATE'
   43 |   BALL_CREATE(MMFF94ParametersBase)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/string.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SYSTEM/path.h:22,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:3: note: in expansion of macro 'BALL_CREATE'
  217 |   BALL_CREATE(MMFF94StretchParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:226:34: note: because 'BALL::MMFF94StretchParameters' has user-provided 'const BALL::MMFF94StretchParameters& BALL::MMFF94StretchParameters::operator=(const BALL::MMFF94StretchParameters&)'
  226 |   const MMFF94StretchParameters& operator = (const MMFF94StretchParameters& param)
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:185:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  185 |  class BALL_EXPORT MMFF94StretchParameters:
      |                    ^~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/string.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SYSTEM/path.h:22,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:3: note: in expansion of macro 'BALL_CREATE'
  217 |   BALL_CREATE(MMFF94StretchParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94BendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:3: note: in expansion of macro 'BALL_CREATE'
  271 |   BALL_CREATE(MMFF94BendParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:280:31: note: because 'BALL::MMFF94BendParameters' has user-provided 'const BALL::MMFF94BendParameters& BALL::MMFF94BendParameters::operator=(const BALL::MMFF94BendParameters&)'
  280 |   const MMFF94BendParameters& operator = (const MMFF94BendParameters& param)
      |                               ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:263:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  263 |  class BALL_EXPORT MMFF94BendParameters
      |                    ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/string.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SYSTEM/path.h:22,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94BendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:3: note: in expansion of macro 'BALL_CREATE'
  271 |   BALL_CREATE(MMFF94BendParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:3: note: in expansion of macro 'BALL_CREATE'
  318 |   BALL_CREATE(MMFF94StretchBendParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:327:38: note: because 'BALL::MMFF94StretchBendParameters' has user-provided 'const BALL::MMFF94StretchBendParameters& BALL::MMFF94StretchBendParameters::operator=(const BALL::MMFF94StretchBendParameters&)'
  327 |   const MMFF94StretchBendParameters& operator = (const MMFF94StretchBendParameters& param)
      |                                      ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:310:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  310 |  class BALL_EXPORT MMFF94StretchBendParameters
      |                    ^~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/string.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SYSTEM/path.h:22,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:3: note: in expansion of macro 'BALL_CREATE'
  318 |   BALL_CREATE(MMFF94StretchBendParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:3: note: in expansion of macro 'BALL_CREATE'
  374 |   BALL_CREATE(MMFF94TorsionParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:383:34: note: because 'BALL::MMFF94TorsionParameters' has user-provided 'const BALL::MMFF94TorsionParameters& BALL::MMFF94TorsionParameters::operator=(const BALL::MMFF94TorsionParameters&)'
  383 |   const MMFF94TorsionParameters& operator = (const MMFF94TorsionParameters& param)
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:366:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  366 |  class BALL_EXPORT MMFF94TorsionParameters
      |                    ^~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/string.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SYSTEM/path.h:22,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:3: note: in expansion of macro 'BALL_CREATE'
  374 |   BALL_CREATE(MMFF94TorsionParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:3: note: in expansion of macro 'BALL_CREATE'
  422 |   BALL_CREATE(MMFF94PlaneParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:431:32: note: because 'BALL::MMFF94PlaneParameters' has user-provided 'const BALL::MMFF94PlaneParameters& BALL::MMFF94PlaneParameters::operator=(const BALL::MMFF94PlaneParameters&)'
  431 |   const MMFF94PlaneParameters& operator = (const MMFF94PlaneParameters& param)
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:414:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  414 |  class BALL_EXPORT MMFF94PlaneParameters
      |                    ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/string.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SYSTEM/path.h:22,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:3: note: in expansion of macro 'BALL_CREATE'
  422 |   BALL_CREATE(MMFF94PlaneParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:3: note: in expansion of macro 'BALL_CREATE'
  473 |   BALL_CREATE(MMFF94VDWParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:482:30: note: because 'BALL::MMFF94VDWParameters' has user-provided 'const BALL::MMFF94VDWParameters& BALL::MMFF94VDWParameters::operator=(const BALL::MMFF94VDWParameters&)'
  482 |   const MMFF94VDWParameters& operator = (const MMFF94VDWParameters& param)
      |                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:458:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  458 |  class BALL_EXPORT MMFF94VDWParameters
      |                    ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/string.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SYSTEM/path.h:22,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:3: note: in expansion of macro 'BALL_CREATE'
  473 |   BALL_CREATE(MMFF94VDWParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94ESParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:3: note: in expansion of macro 'BALL_CREATE'
  530 |   BALL_CREATE(MMFF94ESParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:539:29: note: because 'BALL::MMFF94ESParameters' has user-provided 'const BALL::MMFF94ESParameters& BALL::MMFF94ESParameters::operator=(const BALL::MMFF94ESParameters&)'
  539 |   const MMFF94ESParameters& operator = (const MMFF94ESParameters& param)
      |                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:525:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  525 |  class BALL_EXPORT MMFF94ESParameters
      |                    ^~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/string.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SYSTEM/path.h:22,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94ESParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:3: note: in expansion of macro 'BALL_CREATE'
  530 |   BALL_CREATE(MMFF94ESParameters)
      |   ^~~~~~~~~~~
[ 42%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/MMFF94/MMFF94StretchBend.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/MOLMEC/MMFF94/MMFF94StretchBend.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94StretchBend.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/moleculeIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:24,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94StretchBend.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94StretchBend.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94StretchBend.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94StretchBend.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/moleculeIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:24,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94StretchBend.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94StretchBend.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94StretchBend.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94StretchBend.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/moleculeIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:24,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94StretchBend.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94StretchBend.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94StretchBend.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94StretchBend.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94StretchBend.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94StretchBend.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94ParametersBase::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:43:3: note: in expansion of macro 'BALL_CREATE'
   43 |   BALL_CREATE(MMFF94ParametersBase)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94StretchBend.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94StretchBend.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94StretchBend.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94StretchBend.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:3: note: in expansion of macro 'BALL_CREATE'
  217 |   BALL_CREATE(MMFF94StretchParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94StretchBend.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94StretchBend.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:226:34: note: because 'BALL::MMFF94StretchParameters' has user-provided 'const BALL::MMFF94StretchParameters& BALL::MMFF94StretchParameters::operator=(const BALL::MMFF94StretchParameters&)'
  226 |   const MMFF94StretchParameters& operator = (const MMFF94StretchParameters& param)
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:185:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  185 |  class BALL_EXPORT MMFF94StretchParameters:
      |                    ^~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94StretchBend.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94StretchBend.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:3: note: in expansion of macro 'BALL_CREATE'
  217 |   BALL_CREATE(MMFF94StretchParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94BendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:3: note: in expansion of macro 'BALL_CREATE'
  271 |   BALL_CREATE(MMFF94BendParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94StretchBend.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94StretchBend.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:280:31: note: because 'BALL::MMFF94BendParameters' has user-provided 'const BALL::MMFF94BendParameters& BALL::MMFF94BendParameters::operator=(const BALL::MMFF94BendParameters&)'
  280 |   const MMFF94BendParameters& operator = (const MMFF94BendParameters& param)
      |                               ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:263:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  263 |  class BALL_EXPORT MMFF94BendParameters
      |                    ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94StretchBend.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94StretchBend.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94BendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:3: note: in expansion of macro 'BALL_CREATE'
  271 |   BALL_CREATE(MMFF94BendParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:3: note: in expansion of macro 'BALL_CREATE'
  318 |   BALL_CREATE(MMFF94StretchBendParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94StretchBend.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94StretchBend.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:327:38: note: because 'BALL::MMFF94StretchBendParameters' has user-provided 'const BALL::MMFF94StretchBendParameters& BALL::MMFF94StretchBendParameters::operator=(const BALL::MMFF94StretchBendParameters&)'
  327 |   const MMFF94StretchBendParameters& operator = (const MMFF94StretchBendParameters& param)
      |                                      ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:310:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  310 |  class BALL_EXPORT MMFF94StretchBendParameters
      |                    ^~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94StretchBend.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94StretchBend.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:3: note: in expansion of macro 'BALL_CREATE'
  318 |   BALL_CREATE(MMFF94StretchBendParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:3: note: in expansion of macro 'BALL_CREATE'
  374 |   BALL_CREATE(MMFF94TorsionParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94StretchBend.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94StretchBend.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:383:34: note: because 'BALL::MMFF94TorsionParameters' has user-provided 'const BALL::MMFF94TorsionParameters& BALL::MMFF94TorsionParameters::operator=(const BALL::MMFF94TorsionParameters&)'
  383 |   const MMFF94TorsionParameters& operator = (const MMFF94TorsionParameters& param)
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:366:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  366 |  class BALL_EXPORT MMFF94TorsionParameters
      |                    ^~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94StretchBend.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94StretchBend.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:3: note: in expansion of macro 'BALL_CREATE'
  374 |   BALL_CREATE(MMFF94TorsionParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:3: note: in expansion of macro 'BALL_CREATE'
  422 |   BALL_CREATE(MMFF94PlaneParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94StretchBend.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94StretchBend.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:431:32: note: because 'BALL::MMFF94PlaneParameters' has user-provided 'const BALL::MMFF94PlaneParameters& BALL::MMFF94PlaneParameters::operator=(const BALL::MMFF94PlaneParameters&)'
  431 |   const MMFF94PlaneParameters& operator = (const MMFF94PlaneParameters& param)
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:414:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  414 |  class BALL_EXPORT MMFF94PlaneParameters
      |                    ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94StretchBend.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94StretchBend.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:3: note: in expansion of macro 'BALL_CREATE'
  422 |   BALL_CREATE(MMFF94PlaneParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:3: note: in expansion of macro 'BALL_CREATE'
  473 |   BALL_CREATE(MMFF94VDWParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94StretchBend.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94StretchBend.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:482:30: note: because 'BALL::MMFF94VDWParameters' has user-provided 'const BALL::MMFF94VDWParameters& BALL::MMFF94VDWParameters::operator=(const BALL::MMFF94VDWParameters&)'
  482 |   const MMFF94VDWParameters& operator = (const MMFF94VDWParameters& param)
      |                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:458:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  458 |  class BALL_EXPORT MMFF94VDWParameters
      |                    ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94StretchBend.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94StretchBend.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:3: note: in expansion of macro 'BALL_CREATE'
  473 |   BALL_CREATE(MMFF94VDWParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94ESParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:3: note: in expansion of macro 'BALL_CREATE'
  530 |   BALL_CREATE(MMFF94ESParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94StretchBend.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94StretchBend.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:539:29: note: because 'BALL::MMFF94ESParameters' has user-provided 'const BALL::MMFF94ESParameters& BALL::MMFF94ESParameters::operator=(const BALL::MMFF94ESParameters&)'
  539 |   const MMFF94ESParameters& operator = (const MMFF94ESParameters& param)
      |                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:525:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  525 |  class BALL_EXPORT MMFF94ESParameters
      |                    ^~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94StretchBend.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94StretchBend.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94ESParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:3: note: in expansion of macro 'BALL_CREATE'
  530 |   BALL_CREATE(MMFF94ESParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94StretchBend.C: In member function 'bool BALL::MMFF94StretchBend::setupBends_()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94StretchBend.C:189:37: warning: implicitly-declared 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  189 |    for (it2 = (*atom_it)->beginBond(); +it2 ; ++it2)
      |                                     ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94StretchBend.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94StretchBend.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:437:15: note: because 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::RandomAccessIterator<Container, DataType, Position, Traits>::RandomAccessIterator(const BALL::RandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
  437 |   BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:413:8: warning: implicitly-declared 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  413 |  class RandomAccessIterator
      |        ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:47:15: note: because 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   47 |   BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:24:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   24 |  class ConstRandomAccessIterator
      |        ^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94StretchBend.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94StretchBend.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94StretchBend.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94StretchBend.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:413:8: note: synthesized method 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' first required here
  413 |  class RandomAccessIterator
      |        ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94StretchBend.C: In member function 'bool BALL::MMFF94StretchBend::setupBends_()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94StretchBend.C:189:37: note: synthesized method 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' first required here
  189 |    for (it2 = (*atom_it)->beginBond(); +it2 ; ++it2)
      |                                     ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94StretchBend.C:193:16: warning: implicitly-declared 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  193 |     for (it1 = it2, ++it1; +it1 ; ++it1)
      |                ^~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94StretchBend.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94StretchBend.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:437:15: note: because 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::RandomAccessIterator<Container, DataType, Position, Traits>::RandomAccessIterator(const BALL::RandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
  437 |   BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~
[ 42%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/MMFF94/MMFF94Torsion.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/MOLMEC/MMFF94/MMFF94Torsion.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94Torsion.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/moleculeIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:24,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Torsion.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94Torsion.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Torsion.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94Torsion.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/moleculeIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:24,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Torsion.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94Torsion.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Torsion.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94Torsion.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/moleculeIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:24,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Torsion.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94Torsion.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Torsion.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94Torsion.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Torsion.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94Torsion.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94ParametersBase::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:43:3: note: in expansion of macro 'BALL_CREATE'
   43 |   BALL_CREATE(MMFF94ParametersBase)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Torsion.h:19,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94Torsion.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Torsion.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94Torsion.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:3: note: in expansion of macro 'BALL_CREATE'
  217 |   BALL_CREATE(MMFF94StretchParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Torsion.h:19,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94Torsion.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:226:34: note: because 'BALL::MMFF94StretchParameters' has user-provided 'const BALL::MMFF94StretchParameters& BALL::MMFF94StretchParameters::operator=(const BALL::MMFF94StretchParameters&)'
  226 |   const MMFF94StretchParameters& operator = (const MMFF94StretchParameters& param)
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:185:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  185 |  class BALL_EXPORT MMFF94StretchParameters:
      |                    ^~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Torsion.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94Torsion.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:3: note: in expansion of macro 'BALL_CREATE'
  217 |   BALL_CREATE(MMFF94StretchParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94BendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:3: note: in expansion of macro 'BALL_CREATE'
  271 |   BALL_CREATE(MMFF94BendParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Torsion.h:19,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94Torsion.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:280:31: note: because 'BALL::MMFF94BendParameters' has user-provided 'const BALL::MMFF94BendParameters& BALL::MMFF94BendParameters::operator=(const BALL::MMFF94BendParameters&)'
  280 |   const MMFF94BendParameters& operator = (const MMFF94BendParameters& param)
      |                               ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:263:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  263 |  class BALL_EXPORT MMFF94BendParameters
      |                    ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Torsion.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94Torsion.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94BendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:3: note: in expansion of macro 'BALL_CREATE'
  271 |   BALL_CREATE(MMFF94BendParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:3: note: in expansion of macro 'BALL_CREATE'
  318 |   BALL_CREATE(MMFF94StretchBendParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Torsion.h:19,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94Torsion.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:327:38: note: because 'BALL::MMFF94StretchBendParameters' has user-provided 'const BALL::MMFF94StretchBendParameters& BALL::MMFF94StretchBendParameters::operator=(const BALL::MMFF94StretchBendParameters&)'
  327 |   const MMFF94StretchBendParameters& operator = (const MMFF94StretchBendParameters& param)
      |                                      ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:310:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  310 |  class BALL_EXPORT MMFF94StretchBendParameters
      |                    ^~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Torsion.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94Torsion.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:3: note: in expansion of macro 'BALL_CREATE'
  318 |   BALL_CREATE(MMFF94StretchBendParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:3: note: in expansion of macro 'BALL_CREATE'
  374 |   BALL_CREATE(MMFF94TorsionParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Torsion.h:19,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94Torsion.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:383:34: note: because 'BALL::MMFF94TorsionParameters' has user-provided 'const BALL::MMFF94TorsionParameters& BALL::MMFF94TorsionParameters::operator=(const BALL::MMFF94TorsionParameters&)'
  383 |   const MMFF94TorsionParameters& operator = (const MMFF94TorsionParameters& param)
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:366:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  366 |  class BALL_EXPORT MMFF94TorsionParameters
      |                    ^~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Torsion.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94Torsion.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:3: note: in expansion of macro 'BALL_CREATE'
  374 |   BALL_CREATE(MMFF94TorsionParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:3: note: in expansion of macro 'BALL_CREATE'
  422 |   BALL_CREATE(MMFF94PlaneParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Torsion.h:19,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94Torsion.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:431:32: note: because 'BALL::MMFF94PlaneParameters' has user-provided 'const BALL::MMFF94PlaneParameters& BALL::MMFF94PlaneParameters::operator=(const BALL::MMFF94PlaneParameters&)'
  431 |   const MMFF94PlaneParameters& operator = (const MMFF94PlaneParameters& param)
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:414:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  414 |  class BALL_EXPORT MMFF94PlaneParameters
      |                    ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Torsion.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94Torsion.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:3: note: in expansion of macro 'BALL_CREATE'
  422 |   BALL_CREATE(MMFF94PlaneParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:3: note: in expansion of macro 'BALL_CREATE'
  473 |   BALL_CREATE(MMFF94VDWParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Torsion.h:19,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94Torsion.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:482:30: note: because 'BALL::MMFF94VDWParameters' has user-provided 'const BALL::MMFF94VDWParameters& BALL::MMFF94VDWParameters::operator=(const BALL::MMFF94VDWParameters&)'
  482 |   const MMFF94VDWParameters& operator = (const MMFF94VDWParameters& param)
      |                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:458:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  458 |  class BALL_EXPORT MMFF94VDWParameters
      |                    ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Torsion.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94Torsion.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:3: note: in expansion of macro 'BALL_CREATE'
  473 |   BALL_CREATE(MMFF94VDWParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94ESParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:3: note: in expansion of macro 'BALL_CREATE'
  530 |   BALL_CREATE(MMFF94ESParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Torsion.h:19,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94Torsion.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:539:29: note: because 'BALL::MMFF94ESParameters' has user-provided 'const BALL::MMFF94ESParameters& BALL::MMFF94ESParameters::operator=(const BALL::MMFF94ESParameters&)'
  539 |   const MMFF94ESParameters& operator = (const MMFF94ESParameters& param)
      |                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:525:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  525 |  class BALL_EXPORT MMFF94ESParameters
      |                    ^~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Torsion.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94Torsion.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94ESParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:3: note: in expansion of macro 'BALL_CREATE'
  530 |   BALL_CREATE(MMFF94ESParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94Torsion.C: In member function 'virtual bool BALL::MMFF94Torsion::setup()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94Torsion.C:144:37: warning: implicitly-declared 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  144 |    for (it1 = (*atom_it)->beginBond(); +it1 ; ++ it1)
      |                                     ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Torsion.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94Torsion.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:437:15: note: because 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::RandomAccessIterator<Container, DataType, Position, Traits>::RandomAccessIterator(const BALL::RandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
  437 |   BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:413:8: warning: implicitly-declared 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  413 |  class RandomAccessIterator
      |        ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:47:15: note: because 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   47 |   BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:24:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   24 |  class ConstRandomAccessIterator
      |        ^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Torsion.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94Torsion.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Torsion.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94Torsion.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:413:8: note: synthesized method 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' first required here
  413 |  class RandomAccessIterator
      |        ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94Torsion.C: In member function 'virtual bool BALL::MMFF94Torsion::setup()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94Torsion.C:144:37: note: synthesized method 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' first required here
  144 |    for (it1 = (*atom_it)->beginBond(); +it1 ; ++ it1)
      |                                     ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94Torsion.C:153:38: warning: implicitly-declared 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  153 |     for (it2 = (*atom_it)->beginBond(); +it2 ; ++it2)
      |                                      ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Torsion.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94Torsion.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:437:15: note: because 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::RandomAccessIterator<Container, DataType, Position, Traits>::RandomAccessIterator(const BALL::RandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
  437 |   BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94Torsion.C:163:34: warning: implicitly-declared 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  163 |      for (it3 = atom3->beginBond(); +it3 ; ++it3)
      |                                  ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Torsion.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94Torsion.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:437:15: note: because 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::RandomAccessIterator<Container, DataType, Position, Traits>::RandomAccessIterator(const BALL::RandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
  437 |   BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~
[ 42%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/MMFF94/MMFF94Parameters.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/MOLMEC/MMFF94/MMFF94Parameters.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94Parameters.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94Parameters.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94ParametersBase::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:43:3: note: in expansion of macro 'BALL_CREATE'
   43 |   BALL_CREATE(MMFF94ParametersBase)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94Parameters.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94Parameters.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:3: note: in expansion of macro 'BALL_CREATE'
  217 |   BALL_CREATE(MMFF94StretchParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94Parameters.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:226:34: note: because 'BALL::MMFF94StretchParameters' has user-provided 'const BALL::MMFF94StretchParameters& BALL::MMFF94StretchParameters::operator=(const BALL::MMFF94StretchParameters&)'
  226 |   const MMFF94StretchParameters& operator = (const MMFF94StretchParameters& param)
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:185:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  185 |  class BALL_EXPORT MMFF94StretchParameters:
      |                    ^~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94Parameters.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:3: note: in expansion of macro 'BALL_CREATE'
  217 |   BALL_CREATE(MMFF94StretchParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94BendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:3: note: in expansion of macro 'BALL_CREATE'
  271 |   BALL_CREATE(MMFF94BendParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94Parameters.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:280:31: note: because 'BALL::MMFF94BendParameters' has user-provided 'const BALL::MMFF94BendParameters& BALL::MMFF94BendParameters::operator=(const BALL::MMFF94BendParameters&)'
  280 |   const MMFF94BendParameters& operator = (const MMFF94BendParameters& param)
      |                               ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:263:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  263 |  class BALL_EXPORT MMFF94BendParameters
      |                    ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94Parameters.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94BendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:3: note: in expansion of macro 'BALL_CREATE'
  271 |   BALL_CREATE(MMFF94BendParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:3: note: in expansion of macro 'BALL_CREATE'
  318 |   BALL_CREATE(MMFF94StretchBendParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94Parameters.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:327:38: note: because 'BALL::MMFF94StretchBendParameters' has user-provided 'const BALL::MMFF94StretchBendParameters& BALL::MMFF94StretchBendParameters::operator=(const BALL::MMFF94StretchBendParameters&)'
  327 |   const MMFF94StretchBendParameters& operator = (const MMFF94StretchBendParameters& param)
      |                                      ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:310:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  310 |  class BALL_EXPORT MMFF94StretchBendParameters
      |                    ^~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94Parameters.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:3: note: in expansion of macro 'BALL_CREATE'
  318 |   BALL_CREATE(MMFF94StretchBendParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:3: note: in expansion of macro 'BALL_CREATE'
  374 |   BALL_CREATE(MMFF94TorsionParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94Parameters.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:383:34: note: because 'BALL::MMFF94TorsionParameters' has user-provided 'const BALL::MMFF94TorsionParameters& BALL::MMFF94TorsionParameters::operator=(const BALL::MMFF94TorsionParameters&)'
  383 |   const MMFF94TorsionParameters& operator = (const MMFF94TorsionParameters& param)
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:366:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  366 |  class BALL_EXPORT MMFF94TorsionParameters
      |                    ^~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94Parameters.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:3: note: in expansion of macro 'BALL_CREATE'
  374 |   BALL_CREATE(MMFF94TorsionParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:3: note: in expansion of macro 'BALL_CREATE'
  422 |   BALL_CREATE(MMFF94PlaneParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94Parameters.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:431:32: note: because 'BALL::MMFF94PlaneParameters' has user-provided 'const BALL::MMFF94PlaneParameters& BALL::MMFF94PlaneParameters::operator=(const BALL::MMFF94PlaneParameters&)'
  431 |   const MMFF94PlaneParameters& operator = (const MMFF94PlaneParameters& param)
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:414:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  414 |  class BALL_EXPORT MMFF94PlaneParameters
      |                    ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94Parameters.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:3: note: in expansion of macro 'BALL_CREATE'
  422 |   BALL_CREATE(MMFF94PlaneParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:3: note: in expansion of macro 'BALL_CREATE'
  473 |   BALL_CREATE(MMFF94VDWParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94Parameters.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:482:30: note: because 'BALL::MMFF94VDWParameters' has user-provided 'const BALL::MMFF94VDWParameters& BALL::MMFF94VDWParameters::operator=(const BALL::MMFF94VDWParameters&)'
  482 |   const MMFF94VDWParameters& operator = (const MMFF94VDWParameters& param)
      |                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:458:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  458 |  class BALL_EXPORT MMFF94VDWParameters
      |                    ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94Parameters.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:3: note: in expansion of macro 'BALL_CREATE'
  473 |   BALL_CREATE(MMFF94VDWParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94ESParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:3: note: in expansion of macro 'BALL_CREATE'
  530 |   BALL_CREATE(MMFF94ESParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94Parameters.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:539:29: note: because 'BALL::MMFF94ESParameters' has user-provided 'const BALL::MMFF94ESParameters& BALL::MMFF94ESParameters::operator=(const BALL::MMFF94ESParameters&)'
  539 |   const MMFF94ESParameters& operator = (const MMFF94ESParameters& param)
      |                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:525:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  525 |  class BALL_EXPORT MMFF94ESParameters
      |                    ^~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94Parameters.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94ESParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:3: note: in expansion of macro 'BALL_CREATE'
  530 |   BALL_CREATE(MMFF94ESParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceField.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94Parameters.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceField.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94Parameters.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceField.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94Parameters.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceField.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94Parameters.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceField.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94Parameters.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceField.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94Parameters.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 42%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/MMFF94/MMFF94OutOfPlaneBend.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/MOLMEC/MMFF94/MMFF94OutOfPlaneBend.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94OutOfPlaneBend.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/moleculeIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:24,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94OutOfPlaneBend.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94OutOfPlaneBend.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94OutOfPlaneBend.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94OutOfPlaneBend.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/moleculeIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:24,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94OutOfPlaneBend.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94OutOfPlaneBend.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94OutOfPlaneBend.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94OutOfPlaneBend.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/moleculeIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:24,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94OutOfPlaneBend.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94OutOfPlaneBend.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94OutOfPlaneBend.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94OutOfPlaneBend.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94OutOfPlaneBend.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94OutOfPlaneBend.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94ParametersBase::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:43:3: note: in expansion of macro 'BALL_CREATE'
   43 |   BALL_CREATE(MMFF94ParametersBase)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94OutOfPlaneBend.h:19,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94OutOfPlaneBend.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94OutOfPlaneBend.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94OutOfPlaneBend.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:3: note: in expansion of macro 'BALL_CREATE'
  217 |   BALL_CREATE(MMFF94StretchParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94OutOfPlaneBend.h:19,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94OutOfPlaneBend.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:226:34: note: because 'BALL::MMFF94StretchParameters' has user-provided 'const BALL::MMFF94StretchParameters& BALL::MMFF94StretchParameters::operator=(const BALL::MMFF94StretchParameters&)'
  226 |   const MMFF94StretchParameters& operator = (const MMFF94StretchParameters& param)
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:185:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  185 |  class BALL_EXPORT MMFF94StretchParameters:
      |                    ^~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94OutOfPlaneBend.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94OutOfPlaneBend.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:3: note: in expansion of macro 'BALL_CREATE'
  217 |   BALL_CREATE(MMFF94StretchParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94BendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:3: note: in expansion of macro 'BALL_CREATE'
  271 |   BALL_CREATE(MMFF94BendParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94OutOfPlaneBend.h:19,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94OutOfPlaneBend.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:280:31: note: because 'BALL::MMFF94BendParameters' has user-provided 'const BALL::MMFF94BendParameters& BALL::MMFF94BendParameters::operator=(const BALL::MMFF94BendParameters&)'
  280 |   const MMFF94BendParameters& operator = (const MMFF94BendParameters& param)
      |                               ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:263:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  263 |  class BALL_EXPORT MMFF94BendParameters
      |                    ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94OutOfPlaneBend.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94OutOfPlaneBend.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94BendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:3: note: in expansion of macro 'BALL_CREATE'
  271 |   BALL_CREATE(MMFF94BendParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:3: note: in expansion of macro 'BALL_CREATE'
  318 |   BALL_CREATE(MMFF94StretchBendParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94OutOfPlaneBend.h:19,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94OutOfPlaneBend.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:327:38: note: because 'BALL::MMFF94StretchBendParameters' has user-provided 'const BALL::MMFF94StretchBendParameters& BALL::MMFF94StretchBendParameters::operator=(const BALL::MMFF94StretchBendParameters&)'
  327 |   const MMFF94StretchBendParameters& operator = (const MMFF94StretchBendParameters& param)
      |                                      ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:310:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  310 |  class BALL_EXPORT MMFF94StretchBendParameters
      |                    ^~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94OutOfPlaneBend.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94OutOfPlaneBend.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:3: note: in expansion of macro 'BALL_CREATE'
  318 |   BALL_CREATE(MMFF94StretchBendParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:3: note: in expansion of macro 'BALL_CREATE'
  374 |   BALL_CREATE(MMFF94TorsionParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94OutOfPlaneBend.h:19,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94OutOfPlaneBend.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:383:34: note: because 'BALL::MMFF94TorsionParameters' has user-provided 'const BALL::MMFF94TorsionParameters& BALL::MMFF94TorsionParameters::operator=(const BALL::MMFF94TorsionParameters&)'
  383 |   const MMFF94TorsionParameters& operator = (const MMFF94TorsionParameters& param)
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:366:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  366 |  class BALL_EXPORT MMFF94TorsionParameters
      |                    ^~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94OutOfPlaneBend.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94OutOfPlaneBend.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:3: note: in expansion of macro 'BALL_CREATE'
  374 |   BALL_CREATE(MMFF94TorsionParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:3: note: in expansion of macro 'BALL_CREATE'
  422 |   BALL_CREATE(MMFF94PlaneParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94OutOfPlaneBend.h:19,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94OutOfPlaneBend.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:431:32: note: because 'BALL::MMFF94PlaneParameters' has user-provided 'const BALL::MMFF94PlaneParameters& BALL::MMFF94PlaneParameters::operator=(const BALL::MMFF94PlaneParameters&)'
  431 |   const MMFF94PlaneParameters& operator = (const MMFF94PlaneParameters& param)
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:414:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  414 |  class BALL_EXPORT MMFF94PlaneParameters
      |                    ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94OutOfPlaneBend.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94OutOfPlaneBend.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:3: note: in expansion of macro 'BALL_CREATE'
  422 |   BALL_CREATE(MMFF94PlaneParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:3: note: in expansion of macro 'BALL_CREATE'
  473 |   BALL_CREATE(MMFF94VDWParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94OutOfPlaneBend.h:19,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94OutOfPlaneBend.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:482:30: note: because 'BALL::MMFF94VDWParameters' has user-provided 'const BALL::MMFF94VDWParameters& BALL::MMFF94VDWParameters::operator=(const BALL::MMFF94VDWParameters&)'
  482 |   const MMFF94VDWParameters& operator = (const MMFF94VDWParameters& param)
      |                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:458:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  458 |  class BALL_EXPORT MMFF94VDWParameters
      |                    ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94OutOfPlaneBend.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94OutOfPlaneBend.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:3: note: in expansion of macro 'BALL_CREATE'
  473 |   BALL_CREATE(MMFF94VDWParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94ESParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:3: note: in expansion of macro 'BALL_CREATE'
  530 |   BALL_CREATE(MMFF94ESParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94OutOfPlaneBend.h:19,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94OutOfPlaneBend.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:539:29: note: because 'BALL::MMFF94ESParameters' has user-provided 'const BALL::MMFF94ESParameters& BALL::MMFF94ESParameters::operator=(const BALL::MMFF94ESParameters&)'
  539 |   const MMFF94ESParameters& operator = (const MMFF94ESParameters& param)
      |                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:525:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  525 |  class BALL_EXPORT MMFF94ESParameters
      |                    ^~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94OutOfPlaneBend.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94OutOfPlaneBend.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94ESParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:3: note: in expansion of macro 'BALL_CREATE'
  530 |   BALL_CREATE(MMFF94ESParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94OutOfPlaneBend.C: In member function 'virtual bool BALL::MMFF94OutOfPlaneBend::setup()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94OutOfPlaneBend.C:130:41: warning: implicitly-declared 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  130 |    for (bond_it = (*atom_it)->beginBond(); +bond_it; ++bond_it)
      |                                         ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94OutOfPlaneBend.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94OutOfPlaneBend.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:437:15: note: because 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::RandomAccessIterator<Container, DataType, Position, Traits>::RandomAccessIterator(const BALL::RandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
  437 |   BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:413:8: warning: implicitly-declared 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  413 |  class RandomAccessIterator
      |        ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:47:15: note: because 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   47 |   BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:24:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   24 |  class ConstRandomAccessIterator
      |        ^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94OutOfPlaneBend.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94OutOfPlaneBend.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94OutOfPlaneBend.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94OutOfPlaneBend.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:413:8: note: synthesized method 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' first required here
  413 |  class RandomAccessIterator
      |        ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94OutOfPlaneBend.C: In member function 'virtual bool BALL::MMFF94OutOfPlaneBend::setup()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94OutOfPlaneBend.C:130:41: note: synthesized method 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' first required here
  130 |    for (bond_it = (*atom_it)->beginBond(); +bond_it; ++bond_it)
      |                                         ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94OutOfPlaneBend.C:140:42: warning: implicitly-declared 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  140 |    for (bond_it = central_atom.beginBond(); +bond_it; ++bond_it)
      |                                          ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94OutOfPlaneBend.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94OutOfPlaneBend.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:437:15: note: because 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::RandomAccessIterator<Container, DataType, Position, Traits>::RandomAccessIterator(const BALL::RandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
  437 |   BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~
[ 42%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/MMFF94/MMFF94Processors.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/MOLMEC/MMFF94/MMFF94Processors.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94Processors.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Processors.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94Processors.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94ParametersBase::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:43:3: note: in expansion of macro 'BALL_CREATE'
   43 |   BALL_CREATE(MMFF94ParametersBase)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Processors.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94Processors.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Processors.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94Processors.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:3: note: in expansion of macro 'BALL_CREATE'
  217 |   BALL_CREATE(MMFF94StretchParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Processors.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94Processors.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:226:34: note: because 'BALL::MMFF94StretchParameters' has user-provided 'const BALL::MMFF94StretchParameters& BALL::MMFF94StretchParameters::operator=(const BALL::MMFF94StretchParameters&)'
  226 |   const MMFF94StretchParameters& operator = (const MMFF94StretchParameters& param)
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:185:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  185 |  class BALL_EXPORT MMFF94StretchParameters:
      |                    ^~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Processors.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94Processors.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:3: note: in expansion of macro 'BALL_CREATE'
  217 |   BALL_CREATE(MMFF94StretchParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94BendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:3: note: in expansion of macro 'BALL_CREATE'
  271 |   BALL_CREATE(MMFF94BendParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Processors.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94Processors.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:280:31: note: because 'BALL::MMFF94BendParameters' has user-provided 'const BALL::MMFF94BendParameters& BALL::MMFF94BendParameters::operator=(const BALL::MMFF94BendParameters&)'
  280 |   const MMFF94BendParameters& operator = (const MMFF94BendParameters& param)
      |                               ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:263:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  263 |  class BALL_EXPORT MMFF94BendParameters
      |                    ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Processors.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94Processors.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94BendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:3: note: in expansion of macro 'BALL_CREATE'
  271 |   BALL_CREATE(MMFF94BendParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:3: note: in expansion of macro 'BALL_CREATE'
  318 |   BALL_CREATE(MMFF94StretchBendParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Processors.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94Processors.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:327:38: note: because 'BALL::MMFF94StretchBendParameters' has user-provided 'const BALL::MMFF94StretchBendParameters& BALL::MMFF94StretchBendParameters::operator=(const BALL::MMFF94StretchBendParameters&)'
  327 |   const MMFF94StretchBendParameters& operator = (const MMFF94StretchBendParameters& param)
      |                                      ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:310:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  310 |  class BALL_EXPORT MMFF94StretchBendParameters
      |                    ^~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Processors.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94Processors.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:3: note: in expansion of macro 'BALL_CREATE'
  318 |   BALL_CREATE(MMFF94StretchBendParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:3: note: in expansion of macro 'BALL_CREATE'
  374 |   BALL_CREATE(MMFF94TorsionParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Processors.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94Processors.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:383:34: note: because 'BALL::MMFF94TorsionParameters' has user-provided 'const BALL::MMFF94TorsionParameters& BALL::MMFF94TorsionParameters::operator=(const BALL::MMFF94TorsionParameters&)'
  383 |   const MMFF94TorsionParameters& operator = (const MMFF94TorsionParameters& param)
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:366:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  366 |  class BALL_EXPORT MMFF94TorsionParameters
      |                    ^~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Processors.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94Processors.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:3: note: in expansion of macro 'BALL_CREATE'
  374 |   BALL_CREATE(MMFF94TorsionParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:3: note: in expansion of macro 'BALL_CREATE'
  422 |   BALL_CREATE(MMFF94PlaneParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Processors.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94Processors.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:431:32: note: because 'BALL::MMFF94PlaneParameters' has user-provided 'const BALL::MMFF94PlaneParameters& BALL::MMFF94PlaneParameters::operator=(const BALL::MMFF94PlaneParameters&)'
  431 |   const MMFF94PlaneParameters& operator = (const MMFF94PlaneParameters& param)
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:414:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  414 |  class BALL_EXPORT MMFF94PlaneParameters
      |                    ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Processors.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94Processors.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:3: note: in expansion of macro 'BALL_CREATE'
  422 |   BALL_CREATE(MMFF94PlaneParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:3: note: in expansion of macro 'BALL_CREATE'
  473 |   BALL_CREATE(MMFF94VDWParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Processors.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94Processors.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:482:30: note: because 'BALL::MMFF94VDWParameters' has user-provided 'const BALL::MMFF94VDWParameters& BALL::MMFF94VDWParameters::operator=(const BALL::MMFF94VDWParameters&)'
  482 |   const MMFF94VDWParameters& operator = (const MMFF94VDWParameters& param)
      |                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:458:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  458 |  class BALL_EXPORT MMFF94VDWParameters
      |                    ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Processors.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94Processors.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:3: note: in expansion of macro 'BALL_CREATE'
  473 |   BALL_CREATE(MMFF94VDWParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94ESParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:3: note: in expansion of macro 'BALL_CREATE'
  530 |   BALL_CREATE(MMFF94ESParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Processors.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94Processors.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:539:29: note: because 'BALL::MMFF94ESParameters' has user-provided 'const BALL::MMFF94ESParameters& BALL::MMFF94ESParameters::operator=(const BALL::MMFF94ESParameters&)'
  539 |   const MMFF94ESParameters& operator = (const MMFF94ESParameters& param)
      |                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:525:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  525 |  class BALL_EXPORT MMFF94ESParameters
      |                    ^~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Processors.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94Processors.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94ESParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:3: note: in expansion of macro 'BALL_CREATE'
  530 |   BALL_CREATE(MMFF94ESParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Processors.h:23,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94Processors.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Processors.h:23,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94Processors.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Processors.h:23,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94Processors.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Processors.h:23,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94Processors.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Processors.h:23,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94Processors.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Processors.h:23,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94Processors.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94Processors.C: In member function 'virtual void BALL::MMFF94AtomTyper::assignTo(BALL::System&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94Processors.C:439:20: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  439 |  ait = s.beginAtom();
      |                    ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Processors.h:23,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94Processors.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94Processors.C: In member function 'virtual void BALL::MMFF94AtomTyper::assignTo(BALL::System&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94Processors.C:439:20: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' first required here
  439 |  ait = s.beginAtom();
      |                    ^
[ 42%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/MMFF94/MMFF94NonBonded.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/MOLMEC/MMFF94/MMFF94NonBonded.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94NonBonded.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/moleculeIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:24,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94NonBonded.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94NonBonded.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94NonBonded.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94NonBonded.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/moleculeIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:24,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94NonBonded.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94NonBonded.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94NonBonded.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94NonBonded.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/moleculeIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:24,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94NonBonded.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94NonBonded.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94NonBonded.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94NonBonded.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94NonBonded.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94NonBonded.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94ParametersBase::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:43:3: note: in expansion of macro 'BALL_CREATE'
   43 |   BALL_CREATE(MMFF94ParametersBase)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94NonBonded.h:19,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94NonBonded.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94NonBonded.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94NonBonded.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:3: note: in expansion of macro 'BALL_CREATE'
  217 |   BALL_CREATE(MMFF94StretchParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94NonBonded.h:19,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94NonBonded.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:226:34: note: because 'BALL::MMFF94StretchParameters' has user-provided 'const BALL::MMFF94StretchParameters& BALL::MMFF94StretchParameters::operator=(const BALL::MMFF94StretchParameters&)'
  226 |   const MMFF94StretchParameters& operator = (const MMFF94StretchParameters& param)
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:185:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  185 |  class BALL_EXPORT MMFF94StretchParameters:
      |                    ^~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94NonBonded.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94NonBonded.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:3: note: in expansion of macro 'BALL_CREATE'
  217 |   BALL_CREATE(MMFF94StretchParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94BendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:3: note: in expansion of macro 'BALL_CREATE'
  271 |   BALL_CREATE(MMFF94BendParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94NonBonded.h:19,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94NonBonded.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:280:31: note: because 'BALL::MMFF94BendParameters' has user-provided 'const BALL::MMFF94BendParameters& BALL::MMFF94BendParameters::operator=(const BALL::MMFF94BendParameters&)'
  280 |   const MMFF94BendParameters& operator = (const MMFF94BendParameters& param)
      |                               ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:263:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  263 |  class BALL_EXPORT MMFF94BendParameters
      |                    ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94NonBonded.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94NonBonded.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94BendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:3: note: in expansion of macro 'BALL_CREATE'
  271 |   BALL_CREATE(MMFF94BendParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:3: note: in expansion of macro 'BALL_CREATE'
  318 |   BALL_CREATE(MMFF94StretchBendParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94NonBonded.h:19,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94NonBonded.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:327:38: note: because 'BALL::MMFF94StretchBendParameters' has user-provided 'const BALL::MMFF94StretchBendParameters& BALL::MMFF94StretchBendParameters::operator=(const BALL::MMFF94StretchBendParameters&)'
  327 |   const MMFF94StretchBendParameters& operator = (const MMFF94StretchBendParameters& param)
      |                                      ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:310:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  310 |  class BALL_EXPORT MMFF94StretchBendParameters
      |                    ^~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94NonBonded.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94NonBonded.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:3: note: in expansion of macro 'BALL_CREATE'
  318 |   BALL_CREATE(MMFF94StretchBendParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:3: note: in expansion of macro 'BALL_CREATE'
  374 |   BALL_CREATE(MMFF94TorsionParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94NonBonded.h:19,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94NonBonded.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:383:34: note: because 'BALL::MMFF94TorsionParameters' has user-provided 'const BALL::MMFF94TorsionParameters& BALL::MMFF94TorsionParameters::operator=(const BALL::MMFF94TorsionParameters&)'
  383 |   const MMFF94TorsionParameters& operator = (const MMFF94TorsionParameters& param)
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:366:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  366 |  class BALL_EXPORT MMFF94TorsionParameters
      |                    ^~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94NonBonded.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94NonBonded.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:3: note: in expansion of macro 'BALL_CREATE'
  374 |   BALL_CREATE(MMFF94TorsionParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:3: note: in expansion of macro 'BALL_CREATE'
  422 |   BALL_CREATE(MMFF94PlaneParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94NonBonded.h:19,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94NonBonded.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:431:32: note: because 'BALL::MMFF94PlaneParameters' has user-provided 'const BALL::MMFF94PlaneParameters& BALL::MMFF94PlaneParameters::operator=(const BALL::MMFF94PlaneParameters&)'
  431 |   const MMFF94PlaneParameters& operator = (const MMFF94PlaneParameters& param)
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:414:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  414 |  class BALL_EXPORT MMFF94PlaneParameters
      |                    ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94NonBonded.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94NonBonded.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:3: note: in expansion of macro 'BALL_CREATE'
  422 |   BALL_CREATE(MMFF94PlaneParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:3: note: in expansion of macro 'BALL_CREATE'
  473 |   BALL_CREATE(MMFF94VDWParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94NonBonded.h:19,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94NonBonded.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:482:30: note: because 'BALL::MMFF94VDWParameters' has user-provided 'const BALL::MMFF94VDWParameters& BALL::MMFF94VDWParameters::operator=(const BALL::MMFF94VDWParameters&)'
  482 |   const MMFF94VDWParameters& operator = (const MMFF94VDWParameters& param)
      |                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:458:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  458 |  class BALL_EXPORT MMFF94VDWParameters
      |                    ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94NonBonded.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94NonBonded.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:3: note: in expansion of macro 'BALL_CREATE'
  473 |   BALL_CREATE(MMFF94VDWParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94ESParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:3: note: in expansion of macro 'BALL_CREATE'
  530 |   BALL_CREATE(MMFF94ESParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94NonBonded.h:19,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94NonBonded.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:539:29: note: because 'BALL::MMFF94ESParameters' has user-provided 'const BALL::MMFF94ESParameters& BALL::MMFF94ESParameters::operator=(const BALL::MMFF94ESParameters&)'
  539 |   const MMFF94ESParameters& operator = (const MMFF94ESParameters& param)
      |                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:525:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  525 |  class BALL_EXPORT MMFF94ESParameters
      |                    ^~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94NonBonded.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94NonBonded.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94ESParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:3: note: in expansion of macro 'BALL_CREATE'
  530 |   BALL_CREATE(MMFF94ESParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94NonBonded.C: In member function 'const BALL::MMFF94NonBonded& BALL::MMFF94NonBonded::operator=(const BALL::MMFF94NonBonded&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94NonBonded.C:103:33: warning: implicitly-declared 'BALL::ForceFieldComponent& BALL::ForceFieldComponent::operator=(const BALL::ForceFieldComponent&)' is deprecated [-Wdeprecated-copy]
  103 |   ForceFieldComponent::operator = (anb);
      |                                 ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94NonBonded.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94NonBonded.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:61:3: note: because 'BALL::ForceFieldComponent' has user-provided 'BALL::ForceFieldComponent::ForceFieldComponent(const BALL::ForceFieldComponent&)'
   61 |   ForceFieldComponent(const ForceFieldComponent& force_field_component);
      |   ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h: In member function 'BALL::ForceFieldComponent& BALL::ForceFieldComponent::operator=(const BALL::ForceFieldComponent&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:34:20: warning: implicitly-declared 'BALL::ScoringComponent& BALL::ScoringComponent::operator=(const BALL::ScoringComponent&)' is deprecated [-Wdeprecated-copy]
   34 |  class BALL_EXPORT ForceFieldComponent : public ScoringComponent
      |                    ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:24,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94NonBonded.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94NonBonded.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:26:4: note: because 'BALL::ScoringComponent' has user-provided 'BALL::ScoringComponent::ScoringComponent(const BALL::ScoringComponent&)'
   26 |    ScoringComponent(const ScoringComponent& sc);
      |    ^~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94NonBonded.C: In member function 'const BALL::MMFF94NonBonded& BALL::MMFF94NonBonded::operator=(const BALL::MMFF94NonBonded&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94NonBonded.C:103:33: note: synthesized method 'BALL::ForceFieldComponent& BALL::ForceFieldComponent::operator=(const BALL::ForceFieldComponent&)' first required here
  103 |   ForceFieldComponent::operator = (anb);
      |                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94NonBonded.C:103:39: warning: implicitly-declared 'BALL::ForceFieldComponent& BALL::ForceFieldComponent::operator=(const BALL::ForceFieldComponent&)' is deprecated [-Wdeprecated-copy]
  103 |   ForceFieldComponent::operator = (anb);
      |                                       ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94NonBonded.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94NonBonded.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:61:3: note: because 'BALL::ForceFieldComponent' has user-provided 'BALL::ForceFieldComponent::ForceFieldComponent(const BALL::ForceFieldComponent&)'
   61 |   ForceFieldComponent(const ForceFieldComponent& force_field_component);
      |   ^~~~~~~~~~~~~~~~~~~
[ 42%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/PARAMETER/atomTypes.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/MOLMEC/PARAMETER/atomTypes.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/PARAMETER/atomTypes.C
[ 42%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/PARAMETER/charmmEEF1.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/MOLMEC/PARAMETER/charmmEEF1.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/PARAMETER/charmmEEF1.C
[ 42%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/PARAMETER/cosineTorsion.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/MOLMEC/PARAMETER/cosineTorsion.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/PARAMETER/cosineTorsion.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/PARAMETER/cosineTorsion.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/PARAMETER/cosineTorsion.h: In member function 'void BALL::CosineTorsion::Values::set(const BALL::CosineTorsion::Values&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/PARAMETER/cosineTorsion.h:105:28: warning: implicitly-declared 'BALL::CosineTorsion::SingleValues& BALL::CosineTorsion::SingleValues::operator=(const BALL::CosineTorsion::SingleValues&)' is deprecated [-Wdeprecated-copy]
  105 |      values[i] = v.values[i];
      |                            ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/PARAMETER/cosineTorsion.h:42:4: note: because 'BALL::CosineTorsion::SingleValues' has user-provided 'BALL::CosineTorsion::SingleValues::SingleValues(const BALL::CosineTorsion::SingleValues&)'
   42 |    SingleValues(const SingleValues& v)
      |    ^~~~~~~~~~~~
[ 42%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/PARAMETER/forceFieldParameters.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/MOLMEC/PARAMETER/forceFieldParameters.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/PARAMETER/forceFieldParameters.C
[ 42%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/PARAMETER/lennardJones.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/MOLMEC/PARAMETER/lennardJones.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/PARAMETER/lennardJones.C
[ 42%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/PARAMETER/potential1210.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/MOLMEC/PARAMETER/potential1210.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/PARAMETER/potential1210.C
[ 42%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/PARAMETER/quadraticAngleBend.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/MOLMEC/PARAMETER/quadraticAngleBend.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/PARAMETER/quadraticAngleBend.C
[ 42%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/PARAMETER/quadraticBondStretch.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/MOLMEC/PARAMETER/quadraticBondStretch.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/PARAMETER/quadraticBondStretch.C
[ 42%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/PARAMETER/quadraticImproperTorsion.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/MOLMEC/PARAMETER/quadraticImproperTorsion.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/PARAMETER/quadraticImproperTorsion.C
[ 42%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/PARAMETER/residueTorsions.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/MOLMEC/PARAMETER/residueTorsions.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/PARAMETER/residueTorsions.C
[ 42%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/PARAMETER/templates.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/MOLMEC/PARAMETER/templates.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/PARAMETER/templates.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/PARAMETER/templates.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/PARAMETER/templates.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/parameterSection.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/PARAMETER/templates.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/PARAMETER/templates.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/PARAMETER/templates.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/PARAMETER/templates.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/parameterSection.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/PARAMETER/templates.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/PARAMETER/templates.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/PARAMETER/templates.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/PARAMETER/templates.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/parameterSection.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/PARAMETER/templates.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/PARAMETER/templates.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 42%] Building CXX object CMakeFiles/BALL.dir/source/NMR/anisotropyShiftProcessor.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/NMR/anisotropyShiftProcessor.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/anisotropyShiftProcessor.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/anisotropyShiftProcessor.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/anisotropyShiftProcessor.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/anisotropyShiftProcessor.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/anisotropyShiftProcessor.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/anisotropyShiftProcessor.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/anisotropyShiftProcessor.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/anisotropyShiftProcessor.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/anisotropyShiftProcessor.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/anisotropyShiftProcessor.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/anisotropyShiftProcessor.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/anisotropyShiftProcessor.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/anisotropyShiftProcessor.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 42%] Building CXX object CMakeFiles/BALL.dir/source/NMR/clearShiftProcessor.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/NMR/clearShiftProcessor.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/clearShiftProcessor.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/shiftModule.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/clearShiftProcessor.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/clearShiftProcessor.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/shiftModule.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/clearShiftProcessor.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/clearShiftProcessor.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/shiftModule.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/clearShiftProcessor.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/clearShiftProcessor.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/shiftModule.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/clearShiftProcessor.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/clearShiftProcessor.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/shiftModule.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/clearShiftProcessor.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/clearShiftProcessor.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/shiftModule.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/clearShiftProcessor.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/clearShiftProcessor.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 42%] Building CXX object CMakeFiles/BALL.dir/source/NMR/EFShiftProcessor.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/NMR/EFShiftProcessor.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/EFShiftProcessor.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/shiftModule.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/EFShiftProcessor.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/EFShiftProcessor.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/shiftModule.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/EFShiftProcessor.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/EFShiftProcessor.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/shiftModule.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/EFShiftProcessor.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/EFShiftProcessor.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/shiftModule.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/EFShiftProcessor.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/EFShiftProcessor.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/shiftModule.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/EFShiftProcessor.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/EFShiftProcessor.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/shiftModule.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/EFShiftProcessor.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/EFShiftProcessor.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 42%] Building CXX object CMakeFiles/BALL.dir/source/NMR/empiricalHSShiftProcessor.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/NMR/empiricalHSShiftProcessor.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/empiricalHSShiftProcessor.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/secondaryStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBdefs.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/empiricalHSShiftProcessor.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/empiricalHSShiftProcessor.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/secondaryStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBdefs.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/empiricalHSShiftProcessor.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/empiricalHSShiftProcessor.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/secondaryStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBdefs.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/empiricalHSShiftProcessor.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/empiricalHSShiftProcessor.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/empiricalHSShiftProcessor.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/empiricalHSShiftProcessor.h: In member function 'BALL::EmpiricalHSShiftProcessor::ShiftHyperSurface_& BALL::EmpiricalHSShiftProcessor::ShiftHyperSurface_::operator=(const BALL::EmpiricalHSShiftProcessor::ShiftHyperSurface_&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/empiricalHSShiftProcessor.h:282:9: warning: implicitly-declared 'BALL::CubicSpline2D& BALL::CubicSpline2D::operator=(const BALL::CubicSpline2D&)' is deprecated [-Wdeprecated-copy]
  282 |   class ShiftHyperSurface_
      |         ^~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/empiricalHSShiftProcessor.h:5,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/empiricalHSShiftProcessor.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/cubicSpline2D.h:163:4: note: because 'BALL::CubicSpline2D' has user-provided 'BALL::CubicSpline2D::CubicSpline2D(const BALL::CubicSpline2D&)'
  163 |    CubicSpline2D(const CubicSpline2D& cs2D);
      |    ^~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/empiricalHSShiftProcessor.C: In member function 'virtual void BALL::EmpiricalHSShiftProcessor::init()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/empiricalHSShiftProcessor.C:205:40: note: synthesized method 'BALL::EmpiricalHSShiftProcessor::ShiftHyperSurface_& BALL::EmpiricalHSShiftProcessor::ShiftHyperSurface_::operator=(const BALL::EmpiricalHSShiftProcessor::ShiftHyperSurface_&)' first required here
  205 |      hypersurfaces_[atom_type][tuple]= shs;
      |                                        ^~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/empiricalHSShiftProcessor.C: In member function 'float BALL::EmpiricalHSShiftProcessor::PropertiesForShift_::getChiAngle_(BALL::Residue*)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/empiricalHSShiftProcessor.C:475:30: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  475 |    r_it = residue->beginAtom();
      |                              ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/empiricalHSShiftProcessor.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/empiricalHSShiftProcessor.C: In member function 'float BALL::EmpiricalHSShiftProcessor::PropertiesForShift_::getChiAngle_(BALL::Residue*)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/empiricalHSShiftProcessor.C:475:30: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' first required here
  475 |    r_it = residue->beginAtom();
      |                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/empiricalHSShiftProcessor.C:488:30: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  488 |    r_it = residue->beginAtom();
      |                              ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/empiricalHSShiftProcessor.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/empiricalHSShiftProcessor.C:506:30: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  506 |    r_it = residue->beginAtom();
      |                              ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/empiricalHSShiftProcessor.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/empiricalHSShiftProcessor.C:519:30: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  519 |    r_it = residue->beginAtom();
      |                              ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/empiricalHSShiftProcessor.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/empiricalHSShiftProcessor.C:532:30: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  532 |    r_it = residue->beginAtom();
      |                              ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/empiricalHSShiftProcessor.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/empiricalHSShiftProcessor.C:545:30: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  545 |    r_it = residue->beginAtom();
      |                              ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/empiricalHSShiftProcessor.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/empiricalHSShiftProcessor.C: In member function 'float BALL::EmpiricalHSShiftProcessor::PropertiesForShift_::getChi2Angle_(BALL::Residue*)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/empiricalHSShiftProcessor.C:654:30: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  654 |    r_it = residue->beginAtom();
      |                              ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/empiricalHSShiftProcessor.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/empiricalHSShiftProcessor.C:667:30: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  667 |    r_it = residue->beginAtom();
      |                              ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/empiricalHSShiftProcessor.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/empiricalHSShiftProcessor.C:681:30: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  681 |    r_it = residue->beginAtom();
      |                              ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/empiricalHSShiftProcessor.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/empiricalHSShiftProcessor.C:694:30: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  694 |    r_it = residue->beginAtom();
      |                              ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/empiricalHSShiftProcessor.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/empiricalHSShiftProcessor.C:707:30: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  707 |    r_it = residue->beginAtom();
      |                              ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/empiricalHSShiftProcessor.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/empiricalHSShiftProcessor.C:721:30: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  721 |    r_it = residue->beginAtom();
      |                              ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/empiricalHSShiftProcessor.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/empiricalHSShiftProcessor.C:738:30: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  738 |    r_it = residue->beginAtom();
      |                              ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/empiricalHSShiftProcessor.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/empiricalHSShiftProcessor.C:755:30: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  755 |    r_it = residue->beginAtom();
      |                              ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/empiricalHSShiftProcessor.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/empiricalHSShiftProcessor.C: In constructor 'BALL::EmpiricalHSShiftProcessor::ShiftHyperSurface_::ShiftHyperSurface_(BALL::String, BALL::String, BALL::String, BALL::String, int)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/empiricalHSShiftProcessor.C:1641:28: warning: implicitly-declared 'BALL::CubicSpline1D& BALL::CubicSpline1D::operator=(const BALL::CubicSpline1D&)' is deprecated [-Wdeprecated-copy]
 1641 |    s1d_[first_property_] = s;
      |                            ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/cubicSpline2D.h:8,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/empiricalHSShiftProcessor.h:5,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/empiricalHSShiftProcessor.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/cubicSpline1D.h:124:4: note: because 'BALL::CubicSpline1D' has user-provided 'BALL::CubicSpline1D::CubicSpline1D(const BALL::CubicSpline1D&)'
  124 |    CubicSpline1D(const CubicSpline1D& cs1D);
      |    ^~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/empiricalHSShiftProcessor.C:1679:56: warning: implicitly-declared 'BALL::CubicSpline2D& BALL::CubicSpline2D::operator=(const BALL::CubicSpline2D&)' is deprecated [-Wdeprecated-copy]
 1679 |     s2d_ = CubicSpline2D(x_axis, y_axis, sample_values_);
      |                                                        ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/empiricalHSShiftProcessor.h:5,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/empiricalHSShiftProcessor.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/cubicSpline2D.h:163:4: note: because 'BALL::CubicSpline2D' has user-provided 'BALL::CubicSpline2D::CubicSpline2D(const BALL::CubicSpline2D&)'
  163 |    CubicSpline2D(const CubicSpline2D& cs2D);
      |    ^~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/empiricalHSShiftProcessor.C:1732:32: warning: implicitly-declared 'BALL::CubicSpline1D& BALL::CubicSpline1D::operator=(const BALL::CubicSpline1D&)' is deprecated [-Wdeprecated-copy]
 1732 |      s1d_[y_axis_values_[i]] = s;
      |                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/cubicSpline2D.h:8,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/empiricalHSShiftProcessor.h:5,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/empiricalHSShiftProcessor.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/cubicSpline1D.h:124:4: note: because 'BALL::CubicSpline1D' has user-provided 'BALL::CubicSpline1D::CubicSpline1D(const BALL::CubicSpline1D&)'
  124 |    CubicSpline1D(const CubicSpline1D& cs1D);
      |    ^~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/empiricalHSShiftProcessor.C:1760:32: warning: implicitly-declared 'BALL::CubicSpline1D& BALL::CubicSpline1D::operator=(const BALL::CubicSpline1D&)' is deprecated [-Wdeprecated-copy]
 1760 |      s1d_[y_axis_values_[i]] = s;
      |                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/cubicSpline2D.h:8,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/empiricalHSShiftProcessor.h:5,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/empiricalHSShiftProcessor.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/cubicSpline1D.h:124:4: note: because 'BALL::CubicSpline1D' has user-provided 'BALL::CubicSpline1D::CubicSpline1D(const BALL::CubicSpline1D&)'
  124 |    CubicSpline1D(const CubicSpline1D& cs1D);
      |    ^~~~~~~~~~~~~
[ 42%] Building CXX object CMakeFiles/BALL.dir/source/NMR/experiment.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/NMR/experiment.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/experiment.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/shiftModule.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/experiment.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/experiment.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/peak.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/peakList.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/experiment.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/experiment.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/shiftModule.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/experiment.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/experiment.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/peak.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/peakList.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/experiment.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/experiment.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/shiftModule.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/experiment.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/experiment.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/peak.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/peakList.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/experiment.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/experiment.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 42%] Building CXX object CMakeFiles/BALL.dir/source/NMR/HBondShiftProcessor.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/NMR/HBondShiftProcessor.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/HBondShiftProcessor.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/HBondShiftProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/HBondShiftProcessor.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/HBondShiftProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/HBondShiftProcessor.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/HBondShiftProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/HBondShiftProcessor.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/HBondShiftProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/HBondShiftProcessor.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/HBondShiftProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/HBondShiftProcessor.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/HBondShiftProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/HBondShiftProcessor.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/HBondShiftProcessor.C: In member function 'virtual bool BALL::HBondShiftProcessor::finish()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/HBondShiftProcessor.C:234:42: warning: implicitly-declared 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  234 |       for (bi = acceptors_[a]->beginBond(); +bi; ++bi)
      |                                          ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/HBondShiftProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/HBondShiftProcessor.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:437:15: note: because 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::RandomAccessIterator<Container, DataType, Position, Traits>::RandomAccessIterator(const BALL::RandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
  437 |   BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:413:8: warning: implicitly-declared 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  413 |  class RandomAccessIterator
      |        ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:47:15: note: because 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   47 |   BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:24:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   24 |  class ConstRandomAccessIterator
      |        ^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/HBondShiftProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/HBondShiftProcessor.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/HBondShiftProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/HBondShiftProcessor.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:413:8: note: synthesized method 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' first required here
  413 |  class RandomAccessIterator
      |        ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/HBondShiftProcessor.C: In member function 'virtual bool BALL::HBondShiftProcessor::finish()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/HBondShiftProcessor.C:234:42: note: synthesized method 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' first required here
  234 |       for (bi = acceptors_[a]->beginBond(); +bi; ++bi)
      |                                          ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/HBondShiftProcessor.C:242:39: warning: implicitly-declared 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  242 |       for (bi = donors_[d]->beginBond(); +bi; ++bi)
      |                                       ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/HBondShiftProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/HBondShiftProcessor.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:437:15: note: because 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::RandomAccessIterator<Container, DataType, Position, Traits>::RandomAccessIterator(const BALL::RandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
  437 |   BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~
[ 42%] Building CXX object CMakeFiles/BALL.dir/source/NMR/haighMallionShiftProcessor.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/NMR/haighMallionShiftProcessor.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/haighMallionShiftProcessor.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/shiftModule.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/haighMallionShiftProcessor.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/haighMallionShiftProcessor.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/shiftModule.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/haighMallionShiftProcessor.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/haighMallionShiftProcessor.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/shiftModule.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/haighMallionShiftProcessor.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/haighMallionShiftProcessor.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/shiftModule.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/haighMallionShiftProcessor.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/haighMallionShiftProcessor.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/shiftModule.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/haighMallionShiftProcessor.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/haighMallionShiftProcessor.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/shiftModule.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/haighMallionShiftProcessor.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/haighMallionShiftProcessor.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 47%] Building CXX object CMakeFiles/BALL.dir/source/NMR/createSpectrumProcessor.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/NMR/createSpectrumProcessor.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/createSpectrumProcessor.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/moleculeIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/shiftModule.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/createSpectrumProcessor.h:35,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/createSpectrumProcessor.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/peak.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/createSpectrumProcessor.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/createSpectrumProcessor.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/moleculeIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/shiftModule.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/createSpectrumProcessor.h:35,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/createSpectrumProcessor.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/peak.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/createSpectrumProcessor.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/createSpectrumProcessor.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/moleculeIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/shiftModule.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/createSpectrumProcessor.h:35,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/createSpectrumProcessor.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/peak.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/createSpectrumProcessor.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/createSpectrumProcessor.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 47%] Building CXX object CMakeFiles/BALL.dir/source/NMR/peak.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/NMR/peak.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/peak.C
[ 47%] Building CXX object CMakeFiles/BALL.dir/source/NMR/peakList.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/NMR/peakList.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/peakList.C
[ 47%] Building CXX object CMakeFiles/BALL.dir/source/NMR/shiftModel.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/NMR/shiftModel.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/shiftModel.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/shiftModule.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/shiftModel.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/shiftModel.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/shiftModule.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/shiftModel.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/shiftModel.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/shiftModule.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/shiftModel.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/shiftModel.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/shiftModule.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/shiftModel.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/shiftModel.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/shiftModule.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/shiftModel.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/shiftModel.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/shiftModule.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/shiftModel.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/shiftModel.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 47%] Building CXX object CMakeFiles/BALL.dir/source/NMR/shiftModule.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/NMR/shiftModule.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/shiftModule.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/shiftModule.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/shiftModule.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/shiftModule.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/shiftModule.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/shiftModule.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/shiftModule.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/shiftModule.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/shiftModule.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/shiftModule.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/shiftModule.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/shiftModule.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/shiftModule.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 47%] Building CXX object CMakeFiles/BALL.dir/source/NMR/spectrum.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/NMR/spectrum.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/spectrum.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/spectrum.h:335,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/spectrum.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/spectrum.iC: In constructor 'BALL::Spectrum<DataT, PeakT, PositionT>::Spectrum(const std::vector<PeakT>&, const PositionType&, const PositionType&, const PositionType&) [with DataT = BALL::TRegularData1D<float>; PeakT = BALL::Peak<float>; PositionT = float; BALL::Spectrum<DataT, PeakT, PositionT>::PositionType = float]':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/spectrum.iC:20:31: warning: catching polymorphic type 'class BALL::Exception::OutOfGrid' by value [-Wcatch-value=]
   20 |   catch (Exception::OutOfGrid e)
      |                               ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/spectrum.h:335,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/spectrum.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/spectrum.iC: In constructor 'BALL::Spectrum<DataT, PeakT, PositionT>::Spectrum(const std::vector<PeakT>&, const PositionType&, const PositionType&, const PositionType&) [with DataT = BALL::TRegularData2D<float>; PeakT = BALL::Peak<BALL::TVector2<float> >; PositionT = BALL::TVector2<float>; BALL::Spectrum<DataT, PeakT, PositionT>::PositionType = BALL::TVector2<float>]':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/spectrum.iC:46:31: warning: catching polymorphic type 'class BALL::Exception::OutOfGrid' by value [-Wcatch-value=]
   46 |   catch (Exception::OutOfGrid e)
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/spectrum.iC: In member function 'double BALL::Spectrum<DataT, PeakT, PositionT>::difference(const BALL::Spectrum<DataT, PeakT, PositionT>&) const [with DataT = BALL::TRegularData1D<float>; PeakT = BALL::Peak<float>; PositionT = float]':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/spectrum.iC:135:32: warning: catching polymorphic type 'class BALL::Exception::OutOfGrid' by value [-Wcatch-value=]
  135 |    catch (Exception::OutOfGrid e)
      |                                ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/spectrum.iC: In member function 'double BALL::Spectrum<DataT, PeakT, PositionT>::difference(const BALL::Spectrum<DataT, PeakT, PositionT>&) const [with DataT = BALL::TRegularData2D<float>; PeakT = BALL::Peak<BALL::TVector2<float> >; PositionT = BALL::TVector2<float>]':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/spectrum.iC:177:32: warning: catching polymorphic type 'class BALL::Exception::OutOfGrid' by value [-Wcatch-value=]
  177 |    catch (Exception::OutOfGrid e)
      |                                ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/spectrum.iC: In member function 'double BALL::Spectrum<DataT, PeakT, PositionT>::getFourierDifference(const BALL::Spectrum<DataT, PeakT, PositionT>&, float, float) [with DataT = BALL::TRegularData1D<float>; PeakT = BALL::Peak<float>; PositionT = float]':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/spectrum.iC:752:101: warning: unused parameter 'other_spectrum' [-Wunused-parameter]
  752 | double Spectrum<RegularData1D, Peak1D>::getFourierDifference(const Spectrum<RegularData1D, Peak1D>& other_spectrum, float min_freq, float max_freq)
      |                                                              ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/spectrum.iC:752:123: warning: unused parameter 'min_freq' [-Wunused-parameter]
  752 | double Spectrum<RegularData1D, Peak1D>::getFourierDifference(const Spectrum<RegularData1D, Peak1D>& other_spectrum, float min_freq, float max_freq)
      |                                                                                                                     ~~~~~~^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/spectrum.iC:752:139: warning: unused parameter 'max_freq' [-Wunused-parameter]
  752 | double Spectrum<RegularData1D, Peak1D>::getFourierDifference(const Spectrum<RegularData1D, Peak1D>& other_spectrum, float min_freq, float max_freq)
      |                                                                                                                                     ~~~~~~^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/spectrum.iC: In member function 'double BALL::Spectrum<DataT, PeakT, PositionT>::getFourierDifference(const BALL::Spectrum<DataT, PeakT, PositionT>&, float, float) [with DataT = BALL::TRegularData2D<float>; PeakT = BALL::Peak<BALL::TVector2<float> >; PositionT = BALL::TVector2<float>]':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/spectrum.iC:827:101: warning: unused parameter 'other_spectrum' [-Wunused-parameter]
  827 | double Spectrum<RegularData2D, Peak2D>::getFourierDifference(const Spectrum<RegularData2D, Peak2D>& other_spectrum, float min_freq, float max_freq)
      |                                                              ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/spectrum.iC:827:123: warning: unused parameter 'min_freq' [-Wunused-parameter]
  827 | double Spectrum<RegularData2D, Peak2D>::getFourierDifference(const Spectrum<RegularData2D, Peak2D>& other_spectrum, float min_freq, float max_freq)
      |                                                                                                                     ~~~~~~^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/spectrum.iC:827:139: warning: unused parameter 'max_freq' [-Wunused-parameter]
  827 | double Spectrum<RegularData2D, Peak2D>::getFourierDifference(const Spectrum<RegularData2D, Peak2D>& other_spectrum, float min_freq, float max_freq)
      |                                                                                                                                     ~~~~~~^~~~~~~~
[ 47%] Building CXX object CMakeFiles/BALL.dir/source/NMR/johnsonBoveyShiftProcessor.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/NMR/johnsonBoveyShiftProcessor.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/johnsonBoveyShiftProcessor.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/moleculeIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/shiftModule.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/johnsonBoveyShiftProcessor.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/johnsonBoveyShiftProcessor.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/expressionPredicate.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/expressionTree.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/expressionParser.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/expression.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/johnsonBoveyShiftProcessor.h:12,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/johnsonBoveyShiftProcessor.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/moleculeIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/shiftModule.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/johnsonBoveyShiftProcessor.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/johnsonBoveyShiftProcessor.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/expressionPredicate.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/expressionTree.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/expressionParser.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/expression.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/johnsonBoveyShiftProcessor.h:12,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/johnsonBoveyShiftProcessor.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/moleculeIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/shiftModule.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/johnsonBoveyShiftProcessor.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/johnsonBoveyShiftProcessor.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/expressionPredicate.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/expressionTree.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/expressionParser.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/expression.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/johnsonBoveyShiftProcessor.h:12,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/johnsonBoveyShiftProcessor.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 47%] Building CXX object CMakeFiles/BALL.dir/source/NMR/randomCoilShiftProcessor.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/NMR/randomCoilShiftProcessor.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/randomCoilShiftProcessor.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/shiftModule.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/randomCoilShiftProcessor.h:8,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/randomCoilShiftProcessor.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/shiftModule.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/randomCoilShiftProcessor.h:8,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/randomCoilShiftProcessor.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/shiftModule.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/randomCoilShiftProcessor.h:8,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/randomCoilShiftProcessor.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/shiftModule.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/randomCoilShiftProcessor.h:8,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/randomCoilShiftProcessor.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/shiftModule.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/randomCoilShiftProcessor.h:8,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/randomCoilShiftProcessor.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/shiftModule.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/randomCoilShiftProcessor.h:8,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/randomCoilShiftProcessor.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 47%] Building CXX object CMakeFiles/BALL.dir/source/PLUGIN/BALLPlugin.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/PLUGIN/BALLPlugin.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/PLUGIN/BALLPlugin.C
[ 47%] Building CXX object CMakeFiles/BALL.dir/source/PLUGIN/pluginManager.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/PLUGIN/pluginManager.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/PLUGIN/pluginManager.C
[ 47%] Building CXX object CMakeFiles/BALL.dir/source/PLUGIN/pluginHandler.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/PLUGIN/pluginHandler.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/PLUGIN/pluginHandler.C
[ 47%] Building CXX object CMakeFiles/BALL.dir/source/QSAR/aromaticityProcessor.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/QSAR/aromaticityProcessor.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/aromaticityProcessor.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/aromaticityProcessor.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/aromaticityProcessor.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/aromaticityProcessor.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/aromaticityProcessor.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/aromaticityProcessor.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/aromaticityProcessor.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/aromaticityProcessor.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/aromaticityProcessor.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/aromaticityProcessor.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/aromaticityProcessor.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/aromaticityProcessor.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/aromaticityProcessor.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/aromaticityProcessor.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/aromaticityProcessor.C: In member function 'void BALL::AromaticityProcessor::aromatize(const std::vector<std::vector<BALL::Atom*> >&, BALL::AtomContainer&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:108:49: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  108 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/aromaticityProcessor.C:660:3: note: in expansion of macro 'BALL_FOREACH_BOND'
  660 |   BALL_FOREACH_BOND(ac, a_it, b_it)
      |   ^~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/aromaticityProcessor.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/aromaticityProcessor.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/aromaticityProcessor.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/aromaticityProcessor.C: In member function 'void BALL::AromaticityProcessor::aromatize(const std::vector<std::vector<BALL::Atom*> >&, BALL::AtomContainer&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:108:49: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' first required here
  108 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/aromaticityProcessor.C:660:3: note: in expansion of macro 'BALL_FOREACH_BOND'
  660 |   BALL_FOREACH_BOND(ac, a_it, b_it)
      |   ^~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:110:51: warning: implicitly-declared 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  110 |   for (bond_iterator = (*atom_iterator).beginBond(); \
      |                                                   ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/aromaticityProcessor.C:660:3: note: in expansion of macro 'BALL_FOREACH_BOND'
  660 |   BALL_FOREACH_BOND(ac, a_it, b_it)
      |   ^~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/aromaticityProcessor.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/aromaticityProcessor.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:437:15: note: because 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::RandomAccessIterator<Container, DataType, Position, Traits>::RandomAccessIterator(const BALL::RandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
  437 |   BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:413:8: warning: implicitly-declared 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  413 |  class RandomAccessIterator
      |        ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:47:15: note: because 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   47 |   BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:24:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   24 |  class ConstRandomAccessIterator
      |        ^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/aromaticityProcessor.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/aromaticityProcessor.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/aromaticityProcessor.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/aromaticityProcessor.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:413:8: note: synthesized method 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' first required here
  413 |  class RandomAccessIterator
      |        ^~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/aromaticityProcessor.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/aromaticityProcessor.C: In member function 'void BALL::AromaticityProcessor::aromatize(const std::vector<std::vector<BALL::Atom*> >&, BALL::AtomContainer&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:110:51: note: synthesized method 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' first required here
  110 |   for (bond_iterator = (*atom_iterator).beginBond(); \
      |                                                   ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/aromaticityProcessor.C:660:3: note: in expansion of macro 'BALL_FOREACH_BOND'
  660 |   BALL_FOREACH_BOND(ac, a_it, b_it)
      |   ^~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/aromaticityProcessor.C: In member function 'bool BALL::AromaticityProcessor::hasConjugatedDoubleBonds_(BALL::HashSet<BALL::Atom*>)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/aromaticityProcessor.C:956:16: warning: implicitly-declared 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  956 |      bond_it = it;
      |                ^~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/aromaticityProcessor.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/aromaticityProcessor.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:437:15: note: because 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::RandomAccessIterator<Container, DataType, Position, Traits>::RandomAccessIterator(const BALL::RandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
  437 |   BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/aromaticityProcessor.C: In member function 'BALL::Size BALL::AromaticityProcessor::countPiElectrons_(BALL::HashSet<BALL::Atom*>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/aromaticityProcessor.C:1008:29: warning: implicitly-declared 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
 1008 |      for (j=(*i)->beginBond();j!=(*i)->endBond();++j)
      |                             ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/aromaticityProcessor.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/aromaticityProcessor.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:437:15: note: because 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::RandomAccessIterator<Container, DataType, Position, Traits>::RandomAccessIterator(const BALL::RandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
  437 |   BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/aromaticityProcessor.C:1051:29: warning: implicitly-declared 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
 1051 |      for (j=(*i)->beginBond();j!=(*i)->endBond();++j)
      |                             ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/aromaticityProcessor.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/aromaticityProcessor.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:437:15: note: because 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::RandomAccessIterator<Container, DataType, Position, Traits>::RandomAccessIterator(const BALL::RandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
  437 |   BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~
[ 47%] Building CXX object CMakeFiles/BALL.dir/source/QSAR/automaticModelCreator.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/QSAR/automaticModelCreator.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/automaticModelCreator.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/automaticModelCreator.h:2,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/automaticModelCreator.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/automaticModelCreator.h:2,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/automaticModelCreator.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/automaticModelCreator.h:2,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/automaticModelCreator.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/automaticModelCreator.h:2,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/automaticModelCreator.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/automaticModelCreator.h:2,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/automaticModelCreator.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/automaticModelCreator.h:2,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/automaticModelCreator.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/automaticModelCreator.C: In member function 'void BALL::QSAR::AutomaticModelCreator::optimizeParameters(BALL::QSAR::Model*)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/automaticModelCreator.C:35:39: warning: catching polymorphic type 'class BALL::QSAR::Exception::SingularMatrixError' by value [-Wcatch-value=]
   35 |  catch(Exception::SingularMatrixError e)
      |                                       ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/automaticModelCreator.C: In member function 'BALL::QSAR::Model* BALL::QSAR::AutomaticModelCreator::generateModel()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/automaticModelCreator.C:80:43: warning: catching polymorphic type 'class BALL::Exception::GeneralException' by value [-Wcatch-value=]
   80 |   catch(BALL::Exception::GeneralException e)
      |                                           ^
[ 47%] Building CXX object CMakeFiles/BALL.dir/source/QSAR/bayesModel.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/QSAR/bayesModel.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/bayesModel.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/classificationModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/bayesModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/bayesModel.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/classificationModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/bayesModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/bayesModel.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/classificationModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/bayesModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/bayesModel.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/classificationModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/bayesModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/bayesModel.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/classificationModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/bayesModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/bayesModel.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/classificationModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/bayesModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/bayesModel.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 47%] Building CXX object CMakeFiles/BALL.dir/source/QSAR/classificationModel.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/QSAR/classificationModel.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/classificationModel.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/classificationModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/classificationModel.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/classificationModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/classificationModel.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/classificationModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/classificationModel.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/classificationModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/classificationModel.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/classificationModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/classificationModel.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/classificationModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/classificationModel.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 47%] Building CXX object CMakeFiles/BALL.dir/source/QSAR/classificationValidation.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/QSAR/classificationValidation.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/classificationValidation.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/classificationValidation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/classificationValidation.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/classificationValidation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/classificationValidation.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/classificationValidation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/classificationValidation.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/classificationValidation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/classificationValidation.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/classificationValidation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/classificationValidation.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/classificationValidation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/classificationValidation.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 47%] Building CXX object CMakeFiles/BALL.dir/source/QSAR/configIO.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/QSAR/configIO.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/configIO.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/modelFactory.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/registry.h:5,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/configIO.C:3:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/modelFactory.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/registry.h:5,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/configIO.C:3:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/modelFactory.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/registry.h:5,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/configIO.C:3:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/modelFactory.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/registry.h:5,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/configIO.C:3:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/modelFactory.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/registry.h:5,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/configIO.C:3:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/modelFactory.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/registry.h:5,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/configIO.C:3:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 47%] Building CXX object CMakeFiles/BALL.dir/source/QSAR/connectivityBase.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/QSAR/connectivityBase.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/connectivityBase.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/descriptor.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityBase.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/connectivityBase.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/descriptor.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityBase.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/connectivityBase.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/descriptor.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityBase.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/connectivityBase.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/descriptor.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityBase.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/connectivityBase.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/descriptor.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityBase.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/connectivityBase.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/descriptor.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityBase.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/connectivityBase.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/connectivityBase.C: In member function 'virtual void BALL::ConnectivityBase::calculate_(BALL::AtomContainer&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/connectivityBase.C:109:31: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  109 |   for (atom_it = ac.beginAtom(); atom_it != ac.endAtom(); ++atom_it)
      |                               ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/descriptor.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityBase.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/connectivityBase.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/connectivityBase.C:121:31: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  121 |   for (atom_it = ac.beginAtom(); atom_it != ac.endAtom(); ++atom_it)
      |                               ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/descriptor.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityBase.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/connectivityBase.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/connectivityBase.C:135:26: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  135 |   atom_it = ac.beginAtom();
      |                          ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/descriptor.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityBase.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/connectivityBase.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/connectivityBase.C:136:32: warning: implicitly-declared 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  136 |   bond_it = atom_it->beginBond();
      |                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/descriptor.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityBase.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/connectivityBase.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:47:15: note: because 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   47 |   BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:24:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   24 |  class ConstRandomAccessIterator
      |        ^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/descriptor.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityBase.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/connectivityBase.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/connectivityBase.C: In member function 'virtual void BALL::ConnectivityBase::calculate_(BALL::AtomContainer&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/connectivityBase.C:136:32: note: synthesized method 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' first required here
  136 |   bond_it = atom_it->beginBond();
      |                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/connectivityBase.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:108:49: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  108 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/connectivityBase.C:138:3: note: in expansion of macro 'BALL_FOREACH_BOND'
  138 |   BALL_FOREACH_BOND (ac, atom_it, bond_it)
      |   ^~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/descriptor.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityBase.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/connectivityBase.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/connectivityBase.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:110:51: warning: implicitly-declared 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  110 |   for (bond_iterator = (*atom_iterator).beginBond(); \
      |                                                   ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/connectivityBase.C:138:3: note: in expansion of macro 'BALL_FOREACH_BOND'
  138 |   BALL_FOREACH_BOND (ac, atom_it, bond_it)
      |   ^~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/descriptor.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityBase.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/connectivityBase.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:47:15: note: because 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   47 |   BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/connectivityBase.C: In member function 'void BALL::ConnectivityBase::recursion_(std::vector<double>&, const BALL::Atom*, BALL::HashMap<const BALL::Atom*, unsigned int>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/connectivityBase.C:195:39: warning: implicitly-declared 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  195 |    for (bond_it = min_atom->beginBond(); bond_it != min_atom->endBond(); ++bond_it)
      |                                       ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/descriptor.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityBase.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/connectivityBase.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:47:15: note: because 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   47 |   BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~
[ 47%] Building CXX object CMakeFiles/BALL.dir/source/QSAR/connectivityDescriptors.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/QSAR/connectivityDescriptors.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/connectivityDescriptors.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/descriptor.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityBase.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityDescriptors.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/connectivityDescriptors.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/descriptor.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityBase.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityDescriptors.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/connectivityDescriptors.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/descriptor.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityBase.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityDescriptors.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/connectivityDescriptors.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/descriptor.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityBase.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityDescriptors.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/connectivityDescriptors.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/descriptor.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityBase.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityDescriptors.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/connectivityDescriptors.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/descriptor.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityBase.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityDescriptors.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/connectivityDescriptors.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/connectivityDescriptors.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/connectivityDescriptors.C: In member function 'virtual double BALL::ZagrebIndex::compute(BALL::AtomContainer&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:64:49: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   64 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/connectivityDescriptors.C:50:3: note: in expansion of macro 'BALL_FOREACH_ATOM'
   50 |   BALL_FOREACH_ATOM (ac, atom_it)
      |   ^~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/descriptor.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityBase.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityDescriptors.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/connectivityDescriptors.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/connectivityDescriptors.C:56:39: warning: implicitly-declared 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   56 |     for (bond_it = atom_it->beginBond(); bond_it != atom_it->endBond(); bond_it++)
      |                                       ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/descriptor.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityBase.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityDescriptors.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/connectivityDescriptors.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:47:15: note: because 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   47 |   BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:24:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   24 |  class ConstRandomAccessIterator
      |        ^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/descriptor.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityBase.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityDescriptors.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/connectivityDescriptors.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/connectivityDescriptors.C: In member function 'virtual double BALL::ZagrebIndex::compute(BALL::AtomContainer&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/connectivityDescriptors.C:56:39: note: synthesized method 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' first required here
   56 |     for (bond_it = atom_it->beginBond(); bond_it != atom_it->endBond(); bond_it++)
      |                                       ^
[ 47%] Building CXX object CMakeFiles/BALL.dir/source/QSAR/descriptor.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/QSAR/descriptor.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/descriptor.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/descriptor.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/descriptor.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/descriptor.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/descriptor.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/descriptor.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/descriptor.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/descriptor.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/descriptor.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/descriptor.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/descriptor.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/descriptor.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/descriptor.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 47%] Building CXX object CMakeFiles/BALL.dir/source/QSAR/exception.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/QSAR/exception.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/exception.C
[ 47%] Building CXX object CMakeFiles/BALL.dir/source/QSAR/kernel.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/QSAR/kernel.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/kernel.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/linearModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/kernel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/kernel.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/linearModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/kernel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/kernel.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/linearModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/kernel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/kernel.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/linearModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/kernel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/kernel.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/linearModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/kernel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/kernel.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/linearModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/kernel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/kernel.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 47%] Building CXX object CMakeFiles/BALL.dir/source/QSAR/kernelModel.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/QSAR/kernelModel.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/kernelModel.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/nonlinearModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/kernelModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/kernelModel.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/nonlinearModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/kernelModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/kernelModel.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/nonlinearModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/kernelModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/kernelModel.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/nonlinearModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/kernelModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/kernelModel.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/nonlinearModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/kernelModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/kernelModel.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/nonlinearModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/kernelModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/kernelModel.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/kernelModel.C: In member function 'virtual void BALL::QSAR::KernelModel::calculateOffsets()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/kernelModel.C:60:8: warning: unused variable 'no_act' [-Wunused-variable]
   60 |    int no_act = training_result_.cols();
      |        ^~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/kernelModel.C: In member function 'virtual void BALL::QSAR::KernelModel::saveToFile(std::string)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/kernelModel.C:99:9: warning: variable 'sterr' set but not used [-Wunused-but-set-variable]
   99 |    bool sterr = 0;
      |         ^~~~~
[ 52%] Building CXX object CMakeFiles/BALL.dir/source/QSAR/latentVariableModel.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/QSAR/latentVariableModel.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/latentVariableModel.C
[ 52%] Building CXX object CMakeFiles/BALL.dir/source/QSAR/linearModel.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/QSAR/linearModel.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/linearModel.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/linearModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/linearModel.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/linearModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/linearModel.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/linearModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/linearModel.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/linearModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/linearModel.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/linearModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/linearModel.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/linearModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/linearModel.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 52%] Building CXX object CMakeFiles/BALL.dir/source/QSAR/logitModel.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/QSAR/logitModel.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/logitModel.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/classificationModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/logitModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/logitModel.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/classificationModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/logitModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/logitModel.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/classificationModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/logitModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/logitModel.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/classificationModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/logitModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/logitModel.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/classificationModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/logitModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/logitModel.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/classificationModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/logitModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/logitModel.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/logitModel.C: In member function 'virtual Eigen::VectorXd BALL::QSAR::LogitModel::predict(const std::vector<double>&, bool)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/logitModel.C:90:31: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'Eigen::Index' {aka 'int'} [-Wsign-compare]
   90 |    for (unsigned int i = 0; i < res.rows(); i++)
      |                             ~~^~~~~~~~~~~~
[ 52%] Building CXX object CMakeFiles/BALL.dir/source/QSAR/Model.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/QSAR/Model.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/Model.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/Model.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/Model.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/Model.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/Model.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/Model.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/Model.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/Model.C: In member function 'void BALL::QSAR::Model::readDescriptorInformation()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/Model.C:182:29: warning: variable 'y_transform' set but not used [-Wunused-but-set-variable]
  182 |    bool transform = 0; bool y_transform = 0;
      |                             ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/Model.C: In member function 'Eigen::VectorXd BALL::QSAR::Model::getSubstanceVector(const VectorXd&, bool)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/Model.C:316:51: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'Eigen::Index' {aka 'int'} [-Wsign-compare]
  316 |    if ( (data != NULL && data->getNoDescriptors() != substance.rows()) || (data == NULL && substance.rows() <= *(descriptor_IDs_.end()--)) )
      |                          ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/Model.C:316:109: warning: comparison of integer expressions of different signedness: 'Eigen::Index' {aka 'int'} and 'const unsigned int' [-Wsign-compare]
  316 |    if ( (data != NULL && data->getNoDescriptors() != substance.rows()) || (data == NULL && substance.rows() <= *(descriptor_IDs_.end()--)) )
      |                                                                                            ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/Model.C: In member function 'void BALL::QSAR::Model::readVector(Eigen::RowVectorXd&, std::ifstream&, unsigned int, bool)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/Model.C:486:94: warning: unused parameter 'column_vector' [-Wunused-parameter]
  486 |   void Model::readVector(Eigen::RowVectorXd & vec, ifstream& in, unsigned int no_cells, bool column_vector)
      |                                                                                         ~~~~~^~~~~~~~~~~~~
[ 52%] Building CXX object CMakeFiles/BALL.dir/source/QSAR/modelFactory.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/QSAR/modelFactory.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/modelFactory.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/modelFactory.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/modelFactory.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/modelFactory.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/modelFactory.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/modelFactory.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/modelFactory.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/modelFactory.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/modelFactory.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/modelFactory.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/modelFactory.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/modelFactory.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/modelFactory.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 52%] Building CXX object CMakeFiles/BALL.dir/source/QSAR/nBModel.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/QSAR/nBModel.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/nBModel.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/classificationModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/bayesModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/nBModel.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/nBModel.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/classificationModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/bayesModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/nBModel.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/nBModel.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/classificationModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/bayesModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/nBModel.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/nBModel.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/classificationModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/bayesModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/nBModel.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/nBModel.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/classificationModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/bayesModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/nBModel.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/nBModel.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/classificationModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/bayesModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/nBModel.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/nBModel.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/nBModel.C: In member function 'virtual void BALL::QSAR::NBModel::saveToFile(std::string)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/nBModel.C:240:9: warning: variable 'centered_y' set but not used [-Wunused-but-set-variable]
  240 |    bool centered_y = 0;
      |         ^~~~~~~~~~
[ 52%] Building CXX object CMakeFiles/BALL.dir/source/QSAR/nonlinearModel.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/QSAR/nonlinearModel.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/nonlinearModel.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/nonlinearModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/nonlinearModel.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/nonlinearModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/nonlinearModel.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/nonlinearModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/nonlinearModel.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/nonlinearModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/nonlinearModel.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/nonlinearModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/nonlinearModel.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/nonlinearModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/nonlinearModel.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 52%] Building CXX object CMakeFiles/BALL.dir/source/QSAR/partialChargeBase.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/QSAR/partialChargeBase.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/partialChargeBase.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/descriptor.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/partialChargeBase.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/partialChargeBase.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/descriptor.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/partialChargeBase.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/partialChargeBase.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/descriptor.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/partialChargeBase.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/partialChargeBase.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/descriptor.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/partialChargeBase.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/partialChargeBase.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/descriptor.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/partialChargeBase.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/partialChargeBase.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/descriptor.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/partialChargeBase.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/partialChargeBase.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/partialChargeBase.C: In member function 'virtual void BALL::PartialChargeBase::calculate_(BALL::AtomContainer&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/partialChargeBase.C:108:26: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  108 |   for (it = ac.beginAtom(); it != ac.endAtom(); ++it)
      |                          ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/descriptor.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/partialChargeBase.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/partialChargeBase.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/partialChargeBase.C: In member function 'virtual void BALL::PartialChargeBase::calculate_(BALL::AtomContainer&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/partialChargeBase.C:108:26: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' first required here
  108 |   for (it = ac.beginAtom(); it != ac.endAtom(); ++it)
      |                          ^
[ 52%] Building CXX object CMakeFiles/BALL.dir/source/QSAR/partialChargeDescriptors.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/QSAR/partialChargeDescriptors.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/partialChargeDescriptors.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/descriptor.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/partialChargeBase.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/partialChargeDescriptors.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/partialChargeDescriptors.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/descriptor.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/partialChargeBase.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/partialChargeDescriptors.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/partialChargeDescriptors.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/descriptor.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/partialChargeBase.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/partialChargeDescriptors.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/partialChargeDescriptors.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/descriptor.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/partialChargeBase.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/partialChargeDescriptors.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/partialChargeDescriptors.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/descriptor.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/partialChargeBase.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/partialChargeDescriptors.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/partialChargeDescriptors.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/descriptor.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/partialChargeBase.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/partialChargeDescriptors.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/partialChargeDescriptors.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 52%] Building CXX object CMakeFiles/BALL.dir/source/QSAR/partialChargeProcessor.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/QSAR/partialChargeProcessor.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/partialChargeProcessor.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/partialChargeProcessor.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/partialChargeProcessor.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/partialChargeProcessor.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/partialChargeProcessor.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/partialChargeProcessor.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/partialChargeProcessor.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/partialChargeProcessor.C: In member function 'void BALL::PartialChargeProcessor::calculatePEOE(BALL::AtomContainer&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/partialChargeProcessor.C:85:27: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   85 |    atom_it = ac.beginAtom();
      |                           ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/partialChargeProcessor.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/partialChargeProcessor.C: In member function 'void BALL::PartialChargeProcessor::calculatePEOE(BALL::AtomContainer&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/partialChargeProcessor.C:85:27: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' first required here
   85 |    atom_it = ac.beginAtom();
      |                           ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/partialChargeProcessor.C:12:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:108:49: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  108 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/partialChargeProcessor.C:88:4: note: in expansion of macro 'BALL_FOREACH_BOND'
   88 |    BALL_FOREACH_BOND (ac, atom_it, bond_it)
      |    ^~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/partialChargeProcessor.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/partialChargeProcessor.C:12:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:110:51: warning: implicitly-declared 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  110 |   for (bond_iterator = (*atom_iterator).beginBond(); \
      |                                                   ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/partialChargeProcessor.C:88:4: note: in expansion of macro 'BALL_FOREACH_BOND'
   88 |    BALL_FOREACH_BOND (ac, atom_it, bond_it)
      |    ^~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/partialChargeProcessor.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:437:15: note: because 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::RandomAccessIterator<Container, DataType, Position, Traits>::RandomAccessIterator(const BALL::RandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
  437 |   BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:413:8: warning: implicitly-declared 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  413 |  class RandomAccessIterator
      |        ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:47:15: note: because 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   47 |   BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:24:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   24 |  class ConstRandomAccessIterator
      |        ^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/partialChargeProcessor.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/partialChargeProcessor.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:413:8: note: synthesized method 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' first required here
  413 |  class RandomAccessIterator
      |        ^~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/partialChargeProcessor.C:12:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/partialChargeProcessor.C: In member function 'void BALL::PartialChargeProcessor::calculatePEOE(BALL::AtomContainer&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:110:51: note: synthesized method 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' first required here
  110 |   for (bond_iterator = (*atom_iterator).beginBond(); \
      |                                                   ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/partialChargeProcessor.C:88:4: note: in expansion of macro 'BALL_FOREACH_BOND'
   88 |    BALL_FOREACH_BOND (ac, atom_it, bond_it)
      |    ^~~~~~~~~~~~~~~~~
[ 52%] Building CXX object CMakeFiles/BALL.dir/source/QSAR/QSARData.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/QSAR/QSARData.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/QSARData.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/QSARData.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/QSARData.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/QSARData.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/QSARData.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/QSARData.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/QSARData.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/QSARData.C: In member function 'void BALL::QSAR::QSARData::readSDFile(const char*)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/QSARData.C:77:39: warning: catching polymorphic type 'class BALL::Exception::ParseError' by value [-Wcatch-value=]
   77 |     catch(BALL::Exception::ParseError e)
      |                                       ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/QSARData.C: In member function 'void BALL::QSAR::QSARData::readSDFile(const char*, std::set<BALL::String>&, bool, bool, bool, bool, bool)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/QSARData.C:201:39: warning: catching polymorphic type 'class BALL::Exception::ParseError' by value [-Wcatch-value=]
  201 |     catch(BALL::Exception::ParseError e)
      |                                       ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/QSARData.C:292:44: warning: catching polymorphic type 'class BALL::Exception::InvalidFormat' by value [-Wcatch-value=]
  292 |       catch(BALL::Exception::InvalidFormat g)
      |                                            ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/QSARData.C:313:45: warning: catching polymorphic type 'class BALL::Exception::InvalidFormat' by value [-Wcatch-value=]
  313 |        catch(BALL::Exception::InvalidFormat g)
      |                                             ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/QSARData.C:330:41: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::vector<double> >::size_type' {aka 'unsigned int'} [-Wsign-compare]
  330 |     for(int p=no_internal_descriptors; p<descriptor_matrix_.size(); p++)
      |                                        ~^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/QSARData.C:332:37: warning: comparison of integer expressions of different signedness: 'std::vector<double>::size_type' {aka 'unsigned int'} and 'int' [-Wsign-compare]
  332 |      if(descriptor_matrix_[p].size()<n+1)
      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/QSARData.C:343:23: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::vector<double> >::size_type' {aka 'unsigned int'} [-Wsign-compare]
  343 |     for(int act=0; act<Y_.size(); act++)
      |                    ~~~^~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/QSARData.C:345:23: warning: comparison of integer expressions of different signedness: 'std::vector<double>::size_type' {aka 'unsigned int'} and 'int' [-Wsign-compare]
  345 |      if(Y_[act].size()<n+1)
      |         ~~~~~~~~~~~~~~^~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/QSARData.C: In member function 'void BALL::QSAR::QSARData::readSDFile(const char*, std::multiset<int>&, bool, bool, bool)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/QSARData.C:399:39: warning: catching polymorphic type 'class BALL::Exception::ParseError' by value [-Wcatch-value=]
  399 |     catch(BALL::Exception::ParseError e)
      |                                       ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/QSARData.C:460:45: warning: catching polymorphic type 'class BALL::Exception::InvalidFormat' by value [-Wcatch-value=]
  460 |        catch(BALL::Exception::InvalidFormat g)
      |                                             ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/QSARData.C:488:45: warning: catching polymorphic type 'class BALL::Exception::InvalidFormat' by value [-Wcatch-value=]
  488 |        catch(BALL::Exception::InvalidFormat g)
      |                                             ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/QSARData.C: In member function 'void BALL::QSAR::QSARData::readCSVFile(const char*, int, bool, bool, const char*, bool, bool)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/QSARData.C:1097:44: warning: catching polymorphic type 'class BALL::Exception::InvalidFormat' by value [-Wcatch-value=]
 1097 |       catch(BALL::Exception::InvalidFormat g)
      |                                            ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/QSARData.C:1119:45: warning: catching polymorphic type 'class BALL::Exception::InvalidFormat' by value [-Wcatch-value=]
 1119 |        catch(BALL::Exception::InvalidFormat g)
      |                                             ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/QSARData.C: In member function 'std::vector<BALL::QSAR::QSARData*> BALL::QSAR::QSARData::evenSplit(int, int, int) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/QSARData.C:1354:26: warning: comparison of integer expressions of different signedness: 'BALL::Size' {aka 'unsigned int'} and 'int' [-Wsign-compare]
 1354 |     if (i%no_test_splits == current_test_split_id)
      |         ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
[ 52%] Building CXX object CMakeFiles/BALL.dir/source/QSAR/registry.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/QSAR/registry.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/registry.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/modelFactory.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/registry.h:5,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/registry.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/modelFactory.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/registry.h:5,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/registry.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/modelFactory.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/registry.h:5,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/registry.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/modelFactory.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/registry.h:5,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/registry.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/modelFactory.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/registry.h:5,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/registry.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/modelFactory.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/registry.h:5,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/registry.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 52%] Building CXX object CMakeFiles/BALL.dir/source/QSAR/regressionModel.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/QSAR/regressionModel.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/regressionModel.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/regressionModel.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/regressionModel.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/regressionModel.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/regressionModel.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/regressionModel.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/regressionModel.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/regressionModel.C: In member function 'void BALL::QSAR::RegressionModel::show()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/regressionModel.C:48:9: warning: variable 'sterr' set but not used [-Wunused-but-set-variable]
   48 |    bool sterr = 0;
      |         ^~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/regressionModel.C: In member function 'virtual void BALL::QSAR::RegressionModel::saveToFile(std::string)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/regressionModel.C:129:9: warning: variable 'sterr' set but not used [-Wunused-but-set-variable]
  129 |    bool sterr = 0;
      |         ^~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/regressionModel.C: In member function 'virtual void BALL::QSAR::RegressionModel::saveDescriptorInformationToFile(std::ofstream&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/regressionModel.C:259:45: warning: comparison of integer expressions of different signedness: 'Eigen::Index' {aka 'int'} and 'std::multiset<unsigned int>::size_type' {aka 'unsigned int'} [-Wsign-compare]
  259 |     bool trained = (training_result_.rows() == descriptor_IDs_.size());
      |                     ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/regressionModel.C:285:45: warning: comparison of integer expressions of different signedness: 'Eigen::Index' {aka 'int'} and 'std::vector<std::__cxx11::basic_string<char> >::size_type' {aka 'unsigned int'} [-Wsign-compare]
  285 |     bool trained = (training_result_.rows() == descriptor_names_.size());
      |                     ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 52%] Building CXX object CMakeFiles/BALL.dir/source/QSAR/regressionValidation.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/QSAR/regressionValidation.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/regressionValidation.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionValidation.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/regressionValidation.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionValidation.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/regressionValidation.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionValidation.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/regressionValidation.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionValidation.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/regressionValidation.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionValidation.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/regressionValidation.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionValidation.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/regressionValidation.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/regressionValidation.C: In member function 'virtual void BALL::QSAR::RegressionValidation::testInputData(bool)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/regressionValidation.C:252:8: warning: variable 'col' set but not used [-Wunused-but-set-variable]
  252 |    int col = model_->data->descriptor_matrix_.size();
      |        ^~~
[ 52%] Building CXX object CMakeFiles/BALL.dir/source/QSAR/ringPerceptionProcessor.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/QSAR/ringPerceptionProcessor.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/ringPerceptionProcessor.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/ringPerceptionProcessor.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/ringPerceptionProcessor.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/ringPerceptionProcessor.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/ringPerceptionProcessor.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/ringPerceptionProcessor.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/ringPerceptionProcessor.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/ringPerceptionProcessor.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/ringPerceptionProcessor.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/ringPerceptionProcessor.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/ringPerceptionProcessor.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/ringPerceptionProcessor.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/ringPerceptionProcessor.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/ringPerceptionProcessor.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/ringPerceptionProcessor.C: In member function 'virtual BALL::Processor::Result BALL::RingPerceptionProcessor::operator()(BALL::AtomContainer&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:64:49: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   64 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/ringPerceptionProcessor.C:59:2: note: in expansion of macro 'BALL_FOREACH_ATOM'
   59 |  BALL_FOREACH_ATOM(ac, a_it)
      |  ^~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/ringPerceptionProcessor.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/ringPerceptionProcessor.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/ringPerceptionProcessor.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/ringPerceptionProcessor.C: In member function 'virtual BALL::Processor::Result BALL::RingPerceptionProcessor::operator()(BALL::AtomContainer&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:64:49: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' first required here
   64 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/ringPerceptionProcessor.C:59:2: note: in expansion of macro 'BALL_FOREACH_ATOM'
   59 |  BALL_FOREACH_ATOM(ac, a_it)
      |  ^~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/ringPerceptionProcessor.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:108:49: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  108 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/ringPerceptionProcessor.C:68:2: note: in expansion of macro 'BALL_FOREACH_BOND'
   68 |  BALL_FOREACH_BOND(ac, a_it, b_it)
      |  ^~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/ringPerceptionProcessor.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/ringPerceptionProcessor.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/ringPerceptionProcessor.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:110:51: warning: implicitly-declared 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  110 |   for (bond_iterator = (*atom_iterator).beginBond(); \
      |                                                   ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/ringPerceptionProcessor.C:68:2: note: in expansion of macro 'BALL_FOREACH_BOND'
   68 |  BALL_FOREACH_BOND(ac, a_it, b_it)
      |  ^~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/ringPerceptionProcessor.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/ringPerceptionProcessor.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:437:15: note: because 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::RandomAccessIterator<Container, DataType, Position, Traits>::RandomAccessIterator(const BALL::RandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
  437 |   BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:413:8: warning: implicitly-declared 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  413 |  class RandomAccessIterator
      |        ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:47:15: note: because 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   47 |   BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:24:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   24 |  class ConstRandomAccessIterator
      |        ^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/ringPerceptionProcessor.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/ringPerceptionProcessor.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/ringPerceptionProcessor.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/ringPerceptionProcessor.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:413:8: note: synthesized method 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' first required here
  413 |  class RandomAccessIterator
      |        ^~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/ringPerceptionProcessor.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/ringPerceptionProcessor.C: In member function 'virtual BALL::Processor::Result BALL::RingPerceptionProcessor::operator()(BALL::AtomContainer&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:110:51: note: synthesized method 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' first required here
  110 |   for (bond_iterator = (*atom_iterator).beginBond(); \
      |                                                   ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/ringPerceptionProcessor.C:68:2: note: in expansion of macro 'BALL_FOREACH_BOND'
   68 |  BALL_FOREACH_BOND(ac, a_it, b_it)
      |  ^~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/ringPerceptionProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/ringPerceptionProcessor.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/simpleMolecularGraph.h: In instantiation of 'BALL::TSimpleMolecularGraph<Node, Edge>::TSimpleMolecularGraph(const BALL::Molecule&) [with Node = int; Edge = int]':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/ringPerceptionProcessor.C:89:37:   required from here
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/simpleMolecularGraph.h:228:11: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  228 |   for (ai = molecule.beginAtom(); +ai; ++ai)
      |        ~~~^~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/ringPerceptionProcessor.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/ringPerceptionProcessor.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/ringPerceptionProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/ringPerceptionProcessor.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/simpleMolecularGraph.h:230:12: warning: implicitly-declared 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  230 |    for (bi = ai->beginBond(); +bi; ++bi)
      |         ~~~^~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/ringPerceptionProcessor.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/ringPerceptionProcessor.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:47:15: note: because 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   47 |   BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~
[ 52%] Building CXX object CMakeFiles/BALL.dir/source/QSAR/simpleBase.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/QSAR/simpleBase.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/simpleBase.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/descriptor.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/simpleBase.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/descriptor.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/simpleBase.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/descriptor.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/simpleBase.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/descriptor.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/simpleBase.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/descriptor.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/simpleBase.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/descriptor.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/simpleBase.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/simpleBase.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/simpleBase.C: In member function 'virtual void BALL::SimpleBase::calculate_(BALL::AtomContainer&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:108:49: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  108 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/simpleBase.C:269:3: note: in expansion of macro 'BALL_FOREACH_BOND'
  269 |   BALL_FOREACH_BOND (ac, a_it, b_it)
      |   ^~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/descriptor.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/simpleBase.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/simpleBase.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:110:51: warning: implicitly-declared 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  110 |   for (bond_iterator = (*atom_iterator).beginBond(); \
      |                                                   ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/simpleBase.C:269:3: note: in expansion of macro 'BALL_FOREACH_BOND'
  269 |   BALL_FOREACH_BOND (ac, a_it, b_it)
      |   ^~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/descriptor.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/simpleBase.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:47:15: note: because 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   47 |   BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:24:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   24 |  class ConstRandomAccessIterator
      |        ^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/descriptor.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/simpleBase.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/simpleBase.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/simpleBase.C: In member function 'virtual void BALL::SimpleBase::calculate_(BALL::AtomContainer&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:110:51: note: synthesized method 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' first required here
  110 |   for (bond_iterator = (*atom_iterator).beginBond(); \
      |                                                   ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/simpleBase.C:269:3: note: in expansion of macro 'BALL_FOREACH_BOND'
  269 |   BALL_FOREACH_BOND (ac, a_it, b_it)
      |   ^~~~~~~~~~~~~~~~~
[ 52%] Building CXX object CMakeFiles/BALL.dir/source/QSAR/simpleDescriptors.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/QSAR/simpleDescriptors.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/simpleDescriptors.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/descriptor.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/simpleDescriptors.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/descriptor.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/simpleDescriptors.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/descriptor.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/simpleDescriptors.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/descriptor.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/simpleDescriptors.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/descriptor.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/simpleDescriptors.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/descriptor.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/simpleDescriptors.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/simpleDescriptors.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/simpleDescriptors.C: In member function 'virtual double BALL::NumberOfHydrophobicAtoms::compute(BALL::AtomContainer&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:64:49: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   64 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/simpleDescriptors.C:677:4: note: in expansion of macro 'BALL_FOREACH_ATOM'
  677 |    BALL_FOREACH_ATOM (ac, a_it)
      |    ^~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/descriptor.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/simpleDescriptors.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/simpleDescriptors.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/simpleDescriptors.C: In member function 'virtual double BALL::NumberOfHydrophobicAtoms::compute(BALL::AtomContainer&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:64:49: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' first required here
   64 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/simpleDescriptors.C:677:4: note: in expansion of macro 'BALL_FOREACH_ATOM'
  677 |    BALL_FOREACH_ATOM (ac, a_it)
      |    ^~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/simpleDescriptors.C: In member function 'virtual double BALL::NumberOfHydrogenBondDonors::compute(BALL::AtomContainer&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:64:49: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   64 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/simpleDescriptors.C:746:4: note: in expansion of macro 'BALL_FOREACH_ATOM'
  746 |    BALL_FOREACH_ATOM (ac, a_it)
      |    ^~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/descriptor.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/simpleDescriptors.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/simpleDescriptors.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/simpleDescriptors.C: In member function 'virtual double BALL::NumberOfHydrogenBondAcceptors::compute(BALL::AtomContainer&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:64:49: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   64 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/simpleDescriptors.C:815:4: note: in expansion of macro 'BALL_FOREACH_ATOM'
  815 |    BALL_FOREACH_ATOM (ac, a_it)
      |    ^~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/descriptor.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/simpleDescriptors.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 52%] Building CXX object CMakeFiles/BALL.dir/source/QSAR/snBModel.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/QSAR/snBModel.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/snBModel.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/classificationModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/bayesModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/snBModel.h:18,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/snBModel.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/classificationModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/bayesModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/snBModel.h:18,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/snBModel.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/classificationModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/bayesModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/snBModel.h:18,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/snBModel.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/classificationModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/bayesModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/snBModel.h:18,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/snBModel.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/classificationModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/bayesModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/snBModel.h:18,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/snBModel.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/classificationModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/bayesModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/snBModel.h:18,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/snBModel.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/snBModel.C: In member function 'virtual void BALL::QSAR::SNBModel::saveToFile(std::string)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/snBModel.C:234:9: warning: variable 'centered_y' set but not used [-Wunused-but-set-variable]
  234 |    bool centered_y = 0;
      |         ^~~~~~~~~~
[ 52%] Building CXX object CMakeFiles/BALL.dir/source/QSAR/statistics.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/QSAR/statistics.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/statistics.C
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/statistics.C: In static member function 'static double BALL::QSAR::Statistics::calculateRankCorrelation(std::vector<double>&, std::vector<double>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/statistics.C:169:28: warning: comparison of integer expressions of different signedness: 'BALL::Size' {aka 'unsigned int'} and 'int' [-Wsign-compare]
  169 |      for(Size i=position; i<end_current_score; i++)
      |                           ~^~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/statistics.C:189:28: warning: comparison of integer expressions of different signedness: 'BALL::Size' {aka 'unsigned int'} and 'int' [-Wsign-compare]
  189 |      for(Size i=position; i<end_current_score; i++)
      |                           ~^~~~~~~~~~~~~~~~~~
[ 52%] Building CXX object CMakeFiles/BALL.dir/source/QSAR/surfaceBase.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/QSAR/surfaceBase.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/surfaceBase.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/descriptor.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/surfaceBase.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/surfaceBase.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/descriptor.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/surfaceBase.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/surfaceBase.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/descriptor.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/surfaceBase.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/surfaceBase.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/descriptor.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/surfaceBase.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/surfaceBase.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/descriptor.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/surfaceBase.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/surfaceBase.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/descriptor.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/surfaceBase.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/surfaceBase.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 52%] Building CXX object CMakeFiles/BALL.dir/source/QSAR/surfaceDescriptors.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/QSAR/surfaceDescriptors.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/surfaceDescriptors.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/descriptor.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/surfaceBase.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/surfaceDescriptors.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/surfaceDescriptors.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/descriptor.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/surfaceBase.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/surfaceDescriptors.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/surfaceDescriptors.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/descriptor.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/surfaceBase.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/surfaceDescriptors.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/surfaceDescriptors.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/descriptor.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/surfaceBase.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/surfaceDescriptors.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/surfaceDescriptors.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/descriptor.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/surfaceBase.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/surfaceDescriptors.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/surfaceDescriptors.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/descriptor.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/surfaceBase.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/surfaceDescriptors.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/surfaceDescriptors.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 52%] Building CXX object CMakeFiles/BALL.dir/source/QSAR/svmModel.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/QSAR/svmModel.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/svmModel.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/classificationModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/svmModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/svmModel.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/classificationModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/svmModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/svmModel.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/classificationModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/svmModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/svmModel.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/classificationModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/svmModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/svmModel.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/classificationModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/svmModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/svmModel.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/classificationModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/svmModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/svmModel.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 52%] Building CXX object CMakeFiles/BALL.dir/source/QSAR/svrModel.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/QSAR/svrModel.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/svrModel.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/nonlinearModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/kernelModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/svrModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/svrModel.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/nonlinearModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/kernelModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/svrModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/svrModel.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/nonlinearModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/kernelModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/svrModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/svrModel.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/nonlinearModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/kernelModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/svrModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/svrModel.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/nonlinearModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/kernelModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/svrModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/svrModel.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/nonlinearModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/kernelModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/svrModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/svrModel.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 52%] Building CXX object CMakeFiles/BALL.dir/source/QSAR/validation.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/QSAR/validation.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/validation.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/validation.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/validation.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/validation.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/validation.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/validation.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/validation.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 57%] Building CXX object CMakeFiles/BALL.dir/source/QSAR/allModel.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/QSAR/allModel.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/allModel.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/nonlinearModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/allModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/allModel.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/nonlinearModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/allModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/allModel.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/nonlinearModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/allModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/allModel.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/nonlinearModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/allModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/allModel.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/nonlinearModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/allModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/allModel.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/nonlinearModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/allModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/allModel.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/allModel.C: In member function 'virtual void BALL::QSAR::ALLModel::saveToFile(std::string)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/allModel.C:202:9: warning: variable 'sterr' set but not used [-Wunused-but-set-variable]
  202 |    bool sterr = 0;
      |         ^~~~~
[ 57%] Building CXX object CMakeFiles/BALL.dir/source/QSAR/featureSelection.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/QSAR/featureSelection.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/featureSelection.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/featureSelection.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/featureSelection.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/featureSelection.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/featureSelection.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/featureSelection.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/featureSelection.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/featureSelection.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/featureSelection.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/featureSelection.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/featureSelection.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/featureSelection.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/featureSelection.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/featureSelection.C: In member function 'void BALL::QSAR::FeatureSelection::forward(bool, int, bool)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/featureSelection.C:134:37: warning: catching polymorphic type 'class BALL::QSAR::Exception::NoPCAVariance' by value [-Wcatch-value=]
  134 |      catch(Exception::NoPCAVariance e)
      |                                     ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/featureSelection.C: In member function 'void BALL::QSAR::FeatureSelection::backwardSelection(int, bool)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/featureSelection.C:288:37: warning: catching polymorphic type 'class BALL::QSAR::Exception::NoPCAVariance' by value [-Wcatch-value=]
  288 |      catch(Exception::NoPCAVariance e)
      |                                     ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/featureSelection.C: In member function 'void BALL::QSAR::FeatureSelection::twinScan(int, bool)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/featureSelection.C:449:36: warning: catching polymorphic type 'class BALL::QSAR::Exception::NoPCAVariance' by value [-Wcatch-value=]
  449 |     catch(Exception::NoPCAVariance e)
      |                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/featureSelection.C:456:59: warning: variable 'it' set but not used [-Wunused-but-set-variable]
  456 |     std::multiset< pair<double, unsigned int> >::iterator it = potential_descriptors.insert(make_pair(1-model_->model_val->getCVRes(), i));
      |                                                           ^~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/featureSelection.C:485:36: warning: catching polymorphic type 'class BALL::QSAR::Exception::NoPCAVariance' by value [-Wcatch-value=]
  485 |     catch(Exception::NoPCAVariance e)
      |                                    ^
[ 57%] Building CXX object CMakeFiles/BALL.dir/source/QSAR/gpModel.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/QSAR/gpModel.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/gpModel.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/nonlinearModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/kernelModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/gpModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/gpModel.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/nonlinearModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/kernelModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/gpModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/gpModel.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/nonlinearModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/kernelModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/gpModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/gpModel.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/nonlinearModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/kernelModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/gpModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/gpModel.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/nonlinearModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/kernelModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/gpModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/gpModel.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/nonlinearModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/kernelModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/gpModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/gpModel.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/gpModel.C: In member function 'virtual double BALL::QSAR::GPModel::calculateStdErr()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/gpModel.C:88:31: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'Eigen::Index' {aka 'int'} [-Wsign-compare]
   88 |    for (unsigned int i = 1; i <= K_t_.cols(); i++)
      |                             ~~^~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/gpModel.C:90:32: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'Eigen::Index' {aka 'int'} [-Wsign-compare]
   90 |     for (unsigned int j = 1; j <= K_t_.cols(); j++)
      |                              ~~^~~~~~~~~~~~~~
[ 57%] Building CXX object CMakeFiles/BALL.dir/source/QSAR/knnModel.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/QSAR/knnModel.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/knnModel.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/nonlinearModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/allModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/knnModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/knnModel.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/nonlinearModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/allModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/knnModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/knnModel.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/nonlinearModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/allModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/knnModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/knnModel.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/nonlinearModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/allModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/knnModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/knnModel.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/nonlinearModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/allModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/knnModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/knnModel.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/nonlinearModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/allModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/knnModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/knnModel.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 57%] Building CXX object CMakeFiles/BALL.dir/source/QSAR/kpcrModel.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/QSAR/kpcrModel.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/kpcrModel.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/nonlinearModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/kernelModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/kpcrModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/kpcrModel.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/nonlinearModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/kernelModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/kpcrModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/kpcrModel.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/nonlinearModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/kernelModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/kpcrModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/kpcrModel.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/nonlinearModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/kernelModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/kpcrModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/kpcrModel.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/nonlinearModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/kernelModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/kpcrModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/kpcrModel.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/nonlinearModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/kernelModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/kpcrModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/kpcrModel.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 57%] Building CXX object CMakeFiles/BALL.dir/source/QSAR/kplsModel.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/QSAR/kplsModel.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/kplsModel.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/nonlinearModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/kernelModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/kplsModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/kplsModel.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/nonlinearModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/kernelModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/kplsModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/kplsModel.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/nonlinearModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/kernelModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/kplsModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/kplsModel.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/nonlinearModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/kernelModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/kplsModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/kplsModel.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/nonlinearModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/kernelModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/kplsModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/kplsModel.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/nonlinearModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/kernelModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/kplsModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/kplsModel.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 57%] Building CXX object CMakeFiles/BALL.dir/source/QSAR/ldaModel.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/QSAR/ldaModel.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/ldaModel.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/classificationModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/ldaModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/ldaModel.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/classificationModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/ldaModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/ldaModel.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/classificationModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/ldaModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/ldaModel.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/classificationModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/ldaModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/ldaModel.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/classificationModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/ldaModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/ldaModel.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/classificationModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/ldaModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/ldaModel.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/ldaModel.C: In member function 'virtual Eigen::VectorXd BALL::QSAR::LDAModel::predict(const std::vector<double>&, bool)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/ldaModel.C:123:33: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'Eigen::Index' {aka 'int'} [-Wsign-compare]
  123 |      for (unsigned int i = 0; i < s.rows(); i++)
      |                               ~~^~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/ldaModel.C: In member function 'virtual void BALL::QSAR::LDAModel::saveToFile(std::string)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/ldaModel.C:169:9: warning: variable 'centered_y' set but not used [-Wunused-but-set-variable]
  169 |    bool centered_y = 0;
      |         ^~~~~~~~~~
[ 57%] Building CXX object CMakeFiles/BALL.dir/source/QSAR/mlrModel.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/QSAR/mlrModel.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/mlrModel.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/linearModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/mlrModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/mlrModel.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/linearModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/mlrModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/mlrModel.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/linearModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/mlrModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/mlrModel.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/linearModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/mlrModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/mlrModel.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/linearModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/mlrModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/mlrModel.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/linearModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/mlrModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/mlrModel.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/mlrModel.C: In member function 'virtual void BALL::QSAR::MLRModel::train()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/mlrModel.C:48:44: warning: catching polymorphic type 'class BALL::Exception::GeneralException' by value [-Wcatch-value=]
   48 |    catch(BALL::Exception::GeneralException e)
      |                                            ^
[ 57%] Building CXX object CMakeFiles/BALL.dir/source/QSAR/oplsModel.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/QSAR/oplsModel.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/oplsModel.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/linearModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/plsModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/oplsModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/oplsModel.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/linearModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/plsModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/oplsModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/oplsModel.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/linearModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/plsModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/oplsModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/oplsModel.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/linearModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/plsModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/oplsModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/oplsModel.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/linearModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/plsModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/oplsModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/oplsModel.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/linearModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/plsModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/oplsModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/oplsModel.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/oplsModel.C: In member function 'virtual void BALL::QSAR::OPLSModel::train()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/oplsModel.C:43:31: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'Eigen::Index' {aka 'int'} [-Wsign-compare]
   43 |    for (unsigned int i = 1; i <= u.rows(); i++)
      |                             ~~^~~~~~~~~~~
[ 57%] Building CXX object CMakeFiles/BALL.dir/source/QSAR/pcrModel.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/QSAR/pcrModel.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/pcrModel.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/linearModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/pcrModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/pcrModel.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/linearModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/pcrModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/pcrModel.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/linearModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/pcrModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/pcrModel.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/linearModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/pcrModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/pcrModel.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/linearModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/pcrModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/pcrModel.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/linearModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/pcrModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/pcrModel.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/pcrModel.C: In static member function 'static void BALL::QSAR::PCRModel::calculateEigenvectors(const MatrixXd&, double, Eigen::MatrixXd&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/pcrModel.C:46:23: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'Eigen::Index' {aka 'int'} [-Wsign-compare]
   46 |    for (; last_vector < svd.singularValues().rows() && cols < data.rows() && explained_var/complete_var < frac_var ; last_vector++)
      |           ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/pcrModel.C:46:61: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'Eigen::Index' {aka 'int'} [-Wsign-compare]
   46 |    for (; last_vector < svd.singularValues().rows() && cols < data.rows() && explained_var/complete_var < frac_var ; last_vector++)
      |                                                        ~~~~~^~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/pcrModel.C:55:31: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'Eigen::Index' {aka 'int'} [-Wsign-compare]
   55 |    for (unsigned int i = 0; i < data.rows(); i++)
      |                             ~~^~~~~~~~~~~~~
[ 57%] Building CXX object CMakeFiles/BALL.dir/source/QSAR/plsModel.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/QSAR/plsModel.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/plsModel.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/linearModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/plsModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/plsModel.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/linearModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/plsModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/plsModel.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/linearModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/plsModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/plsModel.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/linearModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/plsModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/plsModel.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/linearModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/plsModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/plsModel.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/linearModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/plsModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/plsModel.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 57%] Building CXX object CMakeFiles/BALL.dir/source/QSAR/rrModel.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/QSAR/rrModel.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/rrModel.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/linearModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/mlrModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/rrModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/rrModel.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/linearModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/mlrModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/rrModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/rrModel.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/linearModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/mlrModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/rrModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/rrModel.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/linearModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/mlrModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/rrModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/rrModel.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/linearModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/mlrModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/rrModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/rrModel.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/linearModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/mlrModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/rrModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/rrModel.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/rrModel.C: In member function 'virtual void BALL::QSAR::RRModel::train()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/rrModel.C:70:44: warning: catching polymorphic type 'class BALL::Exception::GeneralException' by value [-Wcatch-value=]
   70 |    catch(BALL::Exception::GeneralException e)
      |                                            ^
[ 57%] Building CXX object CMakeFiles/BALL.dir/source/SCORING/COMMON/baseFunction.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/SCORING/COMMON/baseFunction.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMMON/baseFunction.C
[ 57%] Building CXX object CMakeFiles/BALL.dir/source/SCORING/COMMON/diffScoringFunction.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/SCORING/COMMON/diffScoringFunction.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMMON/diffScoringFunction.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/diffScoringFunction.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMMON/diffScoringFunction.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/diffScoringFunction.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMMON/diffScoringFunction.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/diffScoringFunction.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMMON/diffScoringFunction.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/diffScoringFunction.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMMON/diffScoringFunction.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/diffScoringFunction.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMMON/diffScoringFunction.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/diffScoringFunction.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMMON/diffScoringFunction.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 57%] Building CXX object CMakeFiles/BALL.dir/source/SCORING/COMMON/diffGridBasedScoring.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/SCORING/COMMON/diffGridBasedScoring.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMMON/diffGridBasedScoring.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/gridBasedScoring.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/diffGridBasedScoring.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMMON/diffGridBasedScoring.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/gridBasedScoring.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/diffGridBasedScoring.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMMON/diffGridBasedScoring.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/gridBasedScoring.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/diffGridBasedScoring.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMMON/diffGridBasedScoring.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/gridBasedScoring.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/diffGridBasedScoring.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMMON/diffGridBasedScoring.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/gridBasedScoring.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/diffGridBasedScoring.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMMON/diffGridBasedScoring.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/gridBasedScoring.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/diffGridBasedScoring.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMMON/diffGridBasedScoring.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 57%] Building CXX object CMakeFiles/BALL.dir/source/SCORING/COMMON/gridBasedScoring.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/SCORING/COMMON/gridBasedScoring.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMMON/gridBasedScoring.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/gridBasedScoring.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMMON/gridBasedScoring.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/gridBasedScoring.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMMON/gridBasedScoring.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/gridBasedScoring.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMMON/gridBasedScoring.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/gridBasedScoring.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMMON/gridBasedScoring.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/gridBasedScoring.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMMON/gridBasedScoring.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/gridBasedScoring.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMMON/gridBasedScoring.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 57%] Building CXX object CMakeFiles/BALL.dir/source/SCORING/COMMON/linearBaseFunction.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/SCORING/COMMON/linearBaseFunction.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMMON/linearBaseFunction.C
[ 57%] Building CXX object CMakeFiles/BALL.dir/source/SCORING/COMMON/fermiBaseFunction.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/SCORING/COMMON/fermiBaseFunction.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMMON/fermiBaseFunction.C
[ 57%] Building CXX object CMakeFiles/BALL.dir/source/SCORING/COMMON/rescorer.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/SCORING/COMMON/rescorer.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMMON/rescorer.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/secondaryStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBdefs.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/dockResultFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMMON/rescorer.C:2:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/dockResultFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMMON/rescorer.C:2:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/secondaryStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBdefs.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/dockResultFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMMON/rescorer.C:2:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/dockResultFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMMON/rescorer.C:2:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/secondaryStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBdefs.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/dockResultFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMMON/rescorer.C:2:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/dockResultFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMMON/rescorer.C:2:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/string.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SYSTEM/file.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/molFileFactory.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMMON/rescorer.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94ParametersBase::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:43:3: note: in expansion of macro 'BALL_CREATE'
   43 |   BALL_CREATE(MMFF94ParametersBase)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/gridedPLP.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMMON/rescorer.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/string.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SYSTEM/file.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/molFileFactory.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMMON/rescorer.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:3: note: in expansion of macro 'BALL_CREATE'
  217 |   BALL_CREATE(MMFF94StretchParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/gridedPLP.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMMON/rescorer.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:226:34: note: because 'BALL::MMFF94StretchParameters' has user-provided 'const BALL::MMFF94StretchParameters& BALL::MMFF94StretchParameters::operator=(const BALL::MMFF94StretchParameters&)'
  226 |   const MMFF94StretchParameters& operator = (const MMFF94StretchParameters& param)
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:185:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  185 |  class BALL_EXPORT MMFF94StretchParameters:
      |                    ^~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/string.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SYSTEM/file.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/molFileFactory.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMMON/rescorer.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:3: note: in expansion of macro 'BALL_CREATE'
  217 |   BALL_CREATE(MMFF94StretchParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94BendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:3: note: in expansion of macro 'BALL_CREATE'
  271 |   BALL_CREATE(MMFF94BendParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/gridedPLP.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMMON/rescorer.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:280:31: note: because 'BALL::MMFF94BendParameters' has user-provided 'const BALL::MMFF94BendParameters& BALL::MMFF94BendParameters::operator=(const BALL::MMFF94BendParameters&)'
  280 |   const MMFF94BendParameters& operator = (const MMFF94BendParameters& param)
      |                               ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:263:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  263 |  class BALL_EXPORT MMFF94BendParameters
      |                    ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/string.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SYSTEM/file.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/molFileFactory.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMMON/rescorer.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94BendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:3: note: in expansion of macro 'BALL_CREATE'
  271 |   BALL_CREATE(MMFF94BendParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:3: note: in expansion of macro 'BALL_CREATE'
  318 |   BALL_CREATE(MMFF94StretchBendParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/gridedPLP.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMMON/rescorer.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:327:38: note: because 'BALL::MMFF94StretchBendParameters' has user-provided 'const BALL::MMFF94StretchBendParameters& BALL::MMFF94StretchBendParameters::operator=(const BALL::MMFF94StretchBendParameters&)'
  327 |   const MMFF94StretchBendParameters& operator = (const MMFF94StretchBendParameters& param)
      |                                      ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:310:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  310 |  class BALL_EXPORT MMFF94StretchBendParameters
      |                    ^~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/string.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SYSTEM/file.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/molFileFactory.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMMON/rescorer.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:3: note: in expansion of macro 'BALL_CREATE'
  318 |   BALL_CREATE(MMFF94StretchBendParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:3: note: in expansion of macro 'BALL_CREATE'
  374 |   BALL_CREATE(MMFF94TorsionParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/gridedPLP.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMMON/rescorer.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:383:34: note: because 'BALL::MMFF94TorsionParameters' has user-provided 'const BALL::MMFF94TorsionParameters& BALL::MMFF94TorsionParameters::operator=(const BALL::MMFF94TorsionParameters&)'
  383 |   const MMFF94TorsionParameters& operator = (const MMFF94TorsionParameters& param)
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:366:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  366 |  class BALL_EXPORT MMFF94TorsionParameters
      |                    ^~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/string.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SYSTEM/file.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/molFileFactory.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMMON/rescorer.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:3: note: in expansion of macro 'BALL_CREATE'
  374 |   BALL_CREATE(MMFF94TorsionParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:3: note: in expansion of macro 'BALL_CREATE'
  422 |   BALL_CREATE(MMFF94PlaneParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/gridedPLP.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMMON/rescorer.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:431:32: note: because 'BALL::MMFF94PlaneParameters' has user-provided 'const BALL::MMFF94PlaneParameters& BALL::MMFF94PlaneParameters::operator=(const BALL::MMFF94PlaneParameters&)'
  431 |   const MMFF94PlaneParameters& operator = (const MMFF94PlaneParameters& param)
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:414:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  414 |  class BALL_EXPORT MMFF94PlaneParameters
      |                    ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/string.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SYSTEM/file.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/molFileFactory.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMMON/rescorer.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:3: note: in expansion of macro 'BALL_CREATE'
  422 |   BALL_CREATE(MMFF94PlaneParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:3: note: in expansion of macro 'BALL_CREATE'
  473 |   BALL_CREATE(MMFF94VDWParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/gridedPLP.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMMON/rescorer.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:482:30: note: because 'BALL::MMFF94VDWParameters' has user-provided 'const BALL::MMFF94VDWParameters& BALL::MMFF94VDWParameters::operator=(const BALL::MMFF94VDWParameters&)'
  482 |   const MMFF94VDWParameters& operator = (const MMFF94VDWParameters& param)
      |                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:458:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  458 |  class BALL_EXPORT MMFF94VDWParameters
      |                    ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/string.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SYSTEM/file.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/molFileFactory.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMMON/rescorer.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:3: note: in expansion of macro 'BALL_CREATE'
  473 |   BALL_CREATE(MMFF94VDWParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94ESParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:3: note: in expansion of macro 'BALL_CREATE'
  530 |   BALL_CREATE(MMFF94ESParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/gridedPLP.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMMON/rescorer.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:539:29: note: because 'BALL::MMFF94ESParameters' has user-provided 'const BALL::MMFF94ESParameters& BALL::MMFF94ESParameters::operator=(const BALL::MMFF94ESParameters&)'
  539 |   const MMFF94ESParameters& operator = (const MMFF94ESParameters& param)
      |                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:525:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  525 |  class BALL_EXPORT MMFF94ESParameters
      |                    ^~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/string.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SYSTEM/file.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/molFileFactory.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMMON/rescorer.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94ESParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:3: note: in expansion of macro 'BALL_CREATE'
  530 |   BALL_CREATE(MMFF94ESParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMMON/rescorer.C: In static member function 'static void BALL::Rescorer::processMultiMoleculeFile(BALL::ScoringFunction*, BALL::StructurePreparer*, BALL::String, BALL::Rescoring*, bool, double, BALL::String, BALL::GenericMolFile*, BALL::GenericMolFile*, double, bool)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMMON/rescorer.C:390:45: warning: catching polymorphic type 'class BALL::Exception::GeneralException' by value [-Wcatch-value=]
  390 |    catch (BALL::Exception::GeneralException e)
      |                                             ^
[ 57%] Building CXX object CMakeFiles/BALL.dir/source/SCORING/COMMON/scoreGridSet.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/SCORING/COMMON/scoreGridSet.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMMON/scoreGridSet.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/gridBasedScoring.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoreGridSet.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMMON/scoreGridSet.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoreGridSet.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMMON/scoreGridSet.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/gridBasedScoring.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoreGridSet.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMMON/scoreGridSet.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoreGridSet.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMMON/scoreGridSet.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/gridBasedScoring.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoreGridSet.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMMON/scoreGridSet.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoreGridSet.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMMON/scoreGridSet.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/gridBasedScoring.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoreGridSet.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMMON/scoreGridSet.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h: In instantiation of 'BALL::Index BALL::HashGrid3<Item>::getIndex_(const BALL::HashGridBox3<Item>&) const [with Item = BALL::Atom*; BALL::Index = int]':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:1667:20:   required from 'void BALL::HashGrid3<Item>::dump(std::ostream&, BALL::Size) const [with Item = BALL::Atom*; std::ostream = std::basic_ostream<char>; BALL::Size = unsigned int]'
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:1625:7:   required from here
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:1726:46: warning: comparison of integer expressions of different signedness: 'int' and 'BALL::Size' {aka 'unsigned int'} [-Wsign-compare]
 1726 |   if ((&box < &box_[0]) || (&box - &box_[0]  >= getSize()))
      |                            ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~
[ 57%] Building CXX object CMakeFiles/BALL.dir/source/SCORING/COMMON/scoringComponent.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/SCORING/COMMON/scoringComponent.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMMON/scoringComponent.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMMON/scoringComponent.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMMON/scoringComponent.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMMON/scoringComponent.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMMON/scoringComponent.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMMON/scoringComponent.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMMON/scoringComponent.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 57%] Building CXX object CMakeFiles/BALL.dir/source/SCORING/COMMON/scoringFunction.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/SCORING/COMMON/scoringFunction.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMMON/scoringFunction.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMMON/scoringFunction.C:4:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMMON/scoringFunction.C:4:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMMON/scoringFunction.C:4:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMMON/scoringFunction.C:4:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMMON/scoringFunction.C:4:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMMON/scoringFunction.C:4:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMMON/scoringFunction.C:4:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h: In instantiation of 'BALL::Index BALL::HashGrid3<Item>::getIndex_(const BALL::HashGridBox3<Item>&) const [with Item = BALL::Atom*; BALL::Index = int]':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:1667:20:   required from 'void BALL::HashGrid3<Item>::dump(std::ostream&, BALL::Size) const [with Item = BALL::Atom*; std::ostream = std::basic_ostream<char>; BALL::Size = unsigned int]'
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:1625:7:   required from here
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:1726:46: warning: comparison of integer expressions of different signedness: 'int' and 'BALL::Size' {aka 'unsigned int'} [-Wsign-compare]
 1726 |   if ((&box < &box_[0]) || (&box - &box_[0]  >= getSize()))
      |                            ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~
[ 57%] Building CXX object CMakeFiles/BALL.dir/source/SCORING/COMMON/scoringOptimizer.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/SCORING/COMMON/scoringOptimizer.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMMON/scoringOptimizer.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringOptimizer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMMON/scoringOptimizer.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringOptimizer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMMON/scoringOptimizer.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringOptimizer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMMON/scoringOptimizer.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringOptimizer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMMON/scoringOptimizer.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringOptimizer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMMON/scoringOptimizer.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringOptimizer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMMON/scoringOptimizer.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringOptimizer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMMON/scoringOptimizer.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94ParametersBase::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:43:3: note: in expansion of macro 'BALL_CREATE'
   43 |   BALL_CREATE(MMFF94ParametersBase)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/PLPScoring.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMMON/scoringOptimizer.C:14:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringOptimizer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMMON/scoringOptimizer.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:3: note: in expansion of macro 'BALL_CREATE'
  217 |   BALL_CREATE(MMFF94StretchParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/PLPScoring.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMMON/scoringOptimizer.C:14:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:226:34: note: because 'BALL::MMFF94StretchParameters' has user-provided 'const BALL::MMFF94StretchParameters& BALL::MMFF94StretchParameters::operator=(const BALL::MMFF94StretchParameters&)'
  226 |   const MMFF94StretchParameters& operator = (const MMFF94StretchParameters& param)
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:185:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  185 |  class BALL_EXPORT MMFF94StretchParameters:
      |                    ^~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringOptimizer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMMON/scoringOptimizer.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:3: note: in expansion of macro 'BALL_CREATE'
  217 |   BALL_CREATE(MMFF94StretchParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94BendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:3: note: in expansion of macro 'BALL_CREATE'
  271 |   BALL_CREATE(MMFF94BendParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/PLPScoring.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMMON/scoringOptimizer.C:14:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:280:31: note: because 'BALL::MMFF94BendParameters' has user-provided 'const BALL::MMFF94BendParameters& BALL::MMFF94BendParameters::operator=(const BALL::MMFF94BendParameters&)'
  280 |   const MMFF94BendParameters& operator = (const MMFF94BendParameters& param)
      |                               ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:263:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  263 |  class BALL_EXPORT MMFF94BendParameters
      |                    ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringOptimizer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMMON/scoringOptimizer.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94BendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:3: note: in expansion of macro 'BALL_CREATE'
  271 |   BALL_CREATE(MMFF94BendParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:3: note: in expansion of macro 'BALL_CREATE'
  318 |   BALL_CREATE(MMFF94StretchBendParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/PLPScoring.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMMON/scoringOptimizer.C:14:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:327:38: note: because 'BALL::MMFF94StretchBendParameters' has user-provided 'const BALL::MMFF94StretchBendParameters& BALL::MMFF94StretchBendParameters::operator=(const BALL::MMFF94StretchBendParameters&)'
  327 |   const MMFF94StretchBendParameters& operator = (const MMFF94StretchBendParameters& param)
      |                                      ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:310:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  310 |  class BALL_EXPORT MMFF94StretchBendParameters
      |                    ^~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringOptimizer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMMON/scoringOptimizer.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:3: note: in expansion of macro 'BALL_CREATE'
  318 |   BALL_CREATE(MMFF94StretchBendParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:3: note: in expansion of macro 'BALL_CREATE'
  374 |   BALL_CREATE(MMFF94TorsionParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/PLPScoring.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMMON/scoringOptimizer.C:14:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:383:34: note: because 'BALL::MMFF94TorsionParameters' has user-provided 'const BALL::MMFF94TorsionParameters& BALL::MMFF94TorsionParameters::operator=(const BALL::MMFF94TorsionParameters&)'
  383 |   const MMFF94TorsionParameters& operator = (const MMFF94TorsionParameters& param)
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:366:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  366 |  class BALL_EXPORT MMFF94TorsionParameters
      |                    ^~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringOptimizer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMMON/scoringOptimizer.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:3: note: in expansion of macro 'BALL_CREATE'
  374 |   BALL_CREATE(MMFF94TorsionParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:3: note: in expansion of macro 'BALL_CREATE'
  422 |   BALL_CREATE(MMFF94PlaneParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/PLPScoring.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMMON/scoringOptimizer.C:14:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:431:32: note: because 'BALL::MMFF94PlaneParameters' has user-provided 'const BALL::MMFF94PlaneParameters& BALL::MMFF94PlaneParameters::operator=(const BALL::MMFF94PlaneParameters&)'
  431 |   const MMFF94PlaneParameters& operator = (const MMFF94PlaneParameters& param)
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:414:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  414 |  class BALL_EXPORT MMFF94PlaneParameters
      |                    ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringOptimizer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMMON/scoringOptimizer.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:3: note: in expansion of macro 'BALL_CREATE'
  422 |   BALL_CREATE(MMFF94PlaneParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:3: note: in expansion of macro 'BALL_CREATE'
  473 |   BALL_CREATE(MMFF94VDWParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/PLPScoring.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMMON/scoringOptimizer.C:14:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:482:30: note: because 'BALL::MMFF94VDWParameters' has user-provided 'const BALL::MMFF94VDWParameters& BALL::MMFF94VDWParameters::operator=(const BALL::MMFF94VDWParameters&)'
  482 |   const MMFF94VDWParameters& operator = (const MMFF94VDWParameters& param)
      |                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:458:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  458 |  class BALL_EXPORT MMFF94VDWParameters
      |                    ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringOptimizer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMMON/scoringOptimizer.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:3: note: in expansion of macro 'BALL_CREATE'
  473 |   BALL_CREATE(MMFF94VDWParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94ESParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:3: note: in expansion of macro 'BALL_CREATE'
  530 |   BALL_CREATE(MMFF94ESParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/PLPScoring.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMMON/scoringOptimizer.C:14:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:539:29: note: because 'BALL::MMFF94ESParameters' has user-provided 'const BALL::MMFF94ESParameters& BALL::MMFF94ESParameters::operator=(const BALL::MMFF94ESParameters&)'
  539 |   const MMFF94ESParameters& operator = (const MMFF94ESParameters& param)
      |                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:525:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  525 |  class BALL_EXPORT MMFF94ESParameters
      |                    ^~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringOptimizer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMMON/scoringOptimizer.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94ESParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:3: note: in expansion of macro 'BALL_CREATE'
  530 |   BALL_CREATE(MMFF94ESParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMMON/scoringOptimizer.C: In member function 'void BALL::ScoringOptimizer::evaluate(double*, double*, double*, BALL::Size*)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMMON/scoringOptimizer.C:187:43: warning: catching polymorphic type 'class BALL::Exception::GeneralException' by value [-Wcatch-value=]
  187 |   catch(BALL::Exception::GeneralException e)
      |                                           ^
[ 61%] Building CXX object CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/aromaticRingStacking.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/aromaticRingStacking.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/aromaticRingStacking.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/aromaticityProcessor.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/aromaticRingStacking.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/aromaticRingStacking.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/aromaticityProcessor.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/aromaticRingStacking.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/aromaticRingStacking.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/aromaticityProcessor.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/aromaticRingStacking.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/aromaticRingStacking.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/aromaticityProcessor.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/aromaticRingStacking.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/aromaticRingStacking.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/aromaticityProcessor.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/aromaticRingStacking.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/aromaticRingStacking.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/aromaticityProcessor.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/aromaticRingStacking.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/aromaticRingStacking.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 61%] Building CXX object CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/advElectrostatic.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/advElectrostatic.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/advElectrostatic.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/moleculeIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:24,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/AMBER/amberNonBonded.h:23,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/electrostatic.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/advElectrostatic.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/advElectrostatic.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/parameterSection.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/PARAMETER/lennardJones.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/AMBER/amberNonBonded.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/electrostatic.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/advElectrostatic.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/advElectrostatic.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/moleculeIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:24,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/AMBER/amberNonBonded.h:23,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/electrostatic.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/advElectrostatic.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/advElectrostatic.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/parameterSection.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/PARAMETER/lennardJones.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/AMBER/amberNonBonded.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/electrostatic.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/advElectrostatic.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/advElectrostatic.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/moleculeIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:24,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/AMBER/amberNonBonded.h:23,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/electrostatic.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/advElectrostatic.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/advElectrostatic.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/parameterSection.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/PARAMETER/lennardJones.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/AMBER/amberNonBonded.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/electrostatic.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/advElectrostatic.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/advElectrostatic.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 61%] Building CXX object CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/fragmentationalSolvation.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/fragmentationalSolvation.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/fragmentationalSolvation.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/solvation.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/fragmentationalSolvation.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/fragmentationalSolvation.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/solvation.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/fragmentationalSolvation.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/fragmentationalSolvation.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/solvation.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/fragmentationalSolvation.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/fragmentationalSolvation.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/solvation.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/fragmentationalSolvation.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/fragmentationalSolvation.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/solvation.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/fragmentationalSolvation.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/fragmentationalSolvation.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/solvation.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/fragmentationalSolvation.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/fragmentationalSolvation.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/solvation.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/fragmentationalSolvation.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/fragmentationalSolvation.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h: In instantiation of 'BALL::Index BALL::HashGrid3<Item>::getIndex_(const BALL::HashGridBox3<Item>&) const [with Item = BALL::Atom*; BALL::Index = int]':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:1667:20:   required from 'void BALL::HashGrid3<Item>::dump(std::ostream&, BALL::Size) const [with Item = BALL::Atom*; std::ostream = std::basic_ostream<char>; BALL::Size = unsigned int]'
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:1625:7:   required from here
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:1726:46: warning: comparison of integer expressions of different signedness: 'int' and 'BALL::Size' {aka 'unsigned int'} [-Wsign-compare]
 1726 |   if ((&box < &box_[0]) || (&box - &box_[0]  >= getSize()))
      |                            ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~
[ 61%] Building CXX object CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/burialDepth.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/burialDepth.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/burialDepth.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/burialDepth.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/burialDepth.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/burialDepth.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/burialDepth.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/burialDepth.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/burialDepth.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/burialDepth.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/burialDepth.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/burialDepth.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/burialDepth.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/burialDepth.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/burialDepth.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 61%] Building CXX object CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/buriedPolar.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/buriedPolar.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/buriedPolar.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/buriedPolar.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/buriedPolar.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/buriedPolar.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/buriedPolar.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/buriedPolar.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/buriedPolar.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/buriedPolar.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/buriedPolar.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/buriedPolar.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/buriedPolar.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/buriedPolar.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/buriedPolar.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 61%] Building CXX object CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/CHPI.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/CHPI.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/CHPI.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceField.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/support.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/CHPI.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/simpleBox3.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/support.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/CHPI.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceField.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/support.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/CHPI.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/simpleBox3.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/support.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/CHPI.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceField.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/support.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/CHPI.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/simpleBox3.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/support.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/CHPI.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 61%] Building CXX object CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/CHPISlick.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/CHPISlick.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/CHPISlick.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceField.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/support.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/CHPISlick.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/simpleBox3.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/support.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/CHPISlick.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceField.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/support.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/CHPISlick.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/simpleBox3.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/support.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/CHPISlick.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceField.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/support.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/CHPISlick.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/simpleBox3.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/support.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/CHPISlick.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 61%] Building CXX object CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/electrostatic.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/electrostatic.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/electrostatic.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/moleculeIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:24,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/AMBER/amberNonBonded.h:23,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/electrostatic.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/electrostatic.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/parameterSection.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/PARAMETER/lennardJones.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/AMBER/amberNonBonded.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/electrostatic.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/electrostatic.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/moleculeIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:24,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/AMBER/amberNonBonded.h:23,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/electrostatic.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/electrostatic.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/parameterSection.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/PARAMETER/lennardJones.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/AMBER/amberNonBonded.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/electrostatic.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/electrostatic.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/moleculeIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:24,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/AMBER/amberNonBonded.h:23,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/electrostatic.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/electrostatic.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/parameterSection.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/PARAMETER/lennardJones.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/AMBER/amberNonBonded.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/electrostatic.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/electrostatic.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 61%] Building CXX object CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/fresnoTypes.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/fresnoTypes.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/fresnoTypes.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/fresnoTypes.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/fresnoTypes.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/fresnoTypes.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/fresnoTypes.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/fresnoTypes.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/fresnoTypes.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/fresnoTypes.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/fresnoTypes.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/fresnoTypes.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/fresnoTypes.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/fresnoTypes.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/fresnoTypes.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/fresnoTypes.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/fresnoTypes.C: In member function 'virtual bool BALL::FresnoTypes::setup()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:77:49: warning: implicitly-declared 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   77 | for (bond_iterator = (bond_container).beginBond(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/fresnoTypes.C:310:6: note: in expansion of macro 'BALL_FOREACH_ATOM_BOND'
  310 |      BALL_FOREACH_ATOM_BOND(*atom, bond_it)
      |      ^~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/fresnoTypes.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/fresnoTypes.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:47:15: note: because 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   47 |   BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:24:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   24 |  class ConstRandomAccessIterator
      |        ^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/fresnoTypes.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/fresnoTypes.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/fresnoTypes.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/fresnoTypes.C: In member function 'virtual bool BALL::FresnoTypes::setup()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:77:49: note: synthesized method 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' first required here
   77 | for (bond_iterator = (bond_container).beginBond(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/fresnoTypes.C:310:6: note: in expansion of macro 'BALL_FOREACH_ATOM_BOND'
  310 |      BALL_FOREACH_ATOM_BOND(*atom, bond_it)
      |      ^~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:77:49: warning: implicitly-declared 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   77 | for (bond_iterator = (bond_container).beginBond(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/fresnoTypes.C:365:7: note: in expansion of macro 'BALL_FOREACH_ATOM_BOND'
  365 |       BALL_FOREACH_ATOM_BOND(*atom, bond_it)
      |       ^~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/fresnoTypes.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/fresnoTypes.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:47:15: note: because 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   47 |   BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~
[ 61%] Building CXX object CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/hydrogenBond.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/hydrogenBond.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/hydrogenBond.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/hydrogenBond.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/hydrogenBond.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/hydrogenBond.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/hydrogenBond.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/hydrogenBond.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/hydrogenBond.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/hydrogenBond.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/hydrogenBond.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/hydrogenBond.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/hydrogenBond.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/hydrogenBond.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/hydrogenBond.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 61%] Building CXX object CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/hydrogenBondSlick.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/hydrogenBondSlick.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/hydrogenBondSlick.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/hydrogenBondSlick.h:7,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/hydrogenBondSlick.C:4:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/hydrogenBondSlick.h:7,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/hydrogenBondSlick.C:4:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/hydrogenBondSlick.h:7,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/hydrogenBondSlick.C:4:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/hydrogenBondSlick.h:7,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/hydrogenBondSlick.C:4:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/hydrogenBondSlick.h:7,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/hydrogenBondSlick.C:4:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/hydrogenBondSlick.h:7,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/hydrogenBondSlick.C:4:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/hydrogenBondSlick.C: In member function 'virtual bool BALL::HydrogenBondSlick::setup()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/hydrogenBondSlick.C:147:35: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  147 |      for (lig_it = lig->beginAtom(); +lig_it; ++lig_it)
      |                                   ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/hydrogenBondSlick.h:7,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/hydrogenBondSlick.C:4:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/hydrogenBondSlick.C:173:32: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  173 |   for (lig_it = lig->beginAtom(); +lig_it; ++lig_it)
      |                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/hydrogenBondSlick.h:7,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/hydrogenBondSlick.C:4:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/hydrogenBondSlick.C:179:35: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  179 |      for (rec_it = rec->beginAtom(); +rec_it; ++rec_it)
      |                                   ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/hydrogenBondSlick.h:7,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/hydrogenBondSlick.C:4:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
[ 61%] Building CXX object CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/lipophilic.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/lipophilic.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/lipophilic.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/lipophilic.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/lipophilic.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/lipophilic.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/lipophilic.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/lipophilic.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/lipophilic.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/lipophilic.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/lipophilic.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/lipophilic.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/lipophilic.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/lipophilic.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/lipophilic.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 61%] Building CXX object CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/polarity.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/polarity.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/polarity.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/polarity.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/polarity.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/polarity.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/polarity.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/polarity.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/polarity.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/polarity.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/polarity.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/polarity.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/polarity.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/polarity.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/polarity.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/polarity.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/polarity.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h: In instantiation of 'BALL::Index BALL::HashGrid3<Item>::getIndex_(const BALL::HashGridBox3<Item>&) const [with Item = BALL::Atom*; BALL::Index = int]':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:1516:17:   required from 'bool BALL::HashGrid3<Item>::getIndices(const BALL::HashGridBox3<Item>&, BALL::Position&, BALL::Position&, BALL::Position&) const [with Item = BALL::Atom*; BALL::Position = unsigned int]'
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/polarity.C:167:49:   required from here
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:1726:46: warning: comparison of integer expressions of different signedness: 'int' and 'BALL::Size' {aka 'unsigned int'} [-Wsign-compare]
 1726 |   if ((&box < &box_[0]) || (&box - &box_[0]  >= getSize()))
      |                            ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~
[ 61%] Building CXX object CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/PB.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/PB.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/PB.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/PB.h:6,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/PB.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/PB.h:6,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/PB.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/PB.h:6,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/PB.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/PB.h:6,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/PB.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/PB.h:6,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/PB.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/PB.h:6,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/PB.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 61%] Building CXX object CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/PLP.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/PLP.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/PLP.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/moleculeIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:24,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/PLP.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/PLP.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/PLP.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/PLP.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/moleculeIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:24,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/PLP.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/PLP.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/PLP.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/PLP.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/moleculeIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:24,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/PLP.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/PLP.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/PLP.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/PLP.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/PLP.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/PLP.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94ParametersBase::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:43:3: note: in expansion of macro 'BALL_CREATE'
   43 |   BALL_CREATE(MMFF94ParametersBase)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/PLP.h:12,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/PLP.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/PLP.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/PLP.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:3: note: in expansion of macro 'BALL_CREATE'
  217 |   BALL_CREATE(MMFF94StretchParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/PLP.h:12,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/PLP.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:226:34: note: because 'BALL::MMFF94StretchParameters' has user-provided 'const BALL::MMFF94StretchParameters& BALL::MMFF94StretchParameters::operator=(const BALL::MMFF94StretchParameters&)'
  226 |   const MMFF94StretchParameters& operator = (const MMFF94StretchParameters& param)
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:185:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  185 |  class BALL_EXPORT MMFF94StretchParameters:
      |                    ^~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/PLP.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/PLP.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:3: note: in expansion of macro 'BALL_CREATE'
  217 |   BALL_CREATE(MMFF94StretchParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94BendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:3: note: in expansion of macro 'BALL_CREATE'
  271 |   BALL_CREATE(MMFF94BendParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/PLP.h:12,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/PLP.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:280:31: note: because 'BALL::MMFF94BendParameters' has user-provided 'const BALL::MMFF94BendParameters& BALL::MMFF94BendParameters::operator=(const BALL::MMFF94BendParameters&)'
  280 |   const MMFF94BendParameters& operator = (const MMFF94BendParameters& param)
      |                               ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:263:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  263 |  class BALL_EXPORT MMFF94BendParameters
      |                    ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/PLP.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/PLP.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94BendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:3: note: in expansion of macro 'BALL_CREATE'
  271 |   BALL_CREATE(MMFF94BendParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:3: note: in expansion of macro 'BALL_CREATE'
  318 |   BALL_CREATE(MMFF94StretchBendParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/PLP.h:12,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/PLP.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:327:38: note: because 'BALL::MMFF94StretchBendParameters' has user-provided 'const BALL::MMFF94StretchBendParameters& BALL::MMFF94StretchBendParameters::operator=(const BALL::MMFF94StretchBendParameters&)'
  327 |   const MMFF94StretchBendParameters& operator = (const MMFF94StretchBendParameters& param)
      |                                      ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:310:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  310 |  class BALL_EXPORT MMFF94StretchBendParameters
      |                    ^~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/PLP.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/PLP.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:3: note: in expansion of macro 'BALL_CREATE'
  318 |   BALL_CREATE(MMFF94StretchBendParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:3: note: in expansion of macro 'BALL_CREATE'
  374 |   BALL_CREATE(MMFF94TorsionParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/PLP.h:12,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/PLP.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:383:34: note: because 'BALL::MMFF94TorsionParameters' has user-provided 'const BALL::MMFF94TorsionParameters& BALL::MMFF94TorsionParameters::operator=(const BALL::MMFF94TorsionParameters&)'
  383 |   const MMFF94TorsionParameters& operator = (const MMFF94TorsionParameters& param)
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:366:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  366 |  class BALL_EXPORT MMFF94TorsionParameters
      |                    ^~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/PLP.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/PLP.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:3: note: in expansion of macro 'BALL_CREATE'
  374 |   BALL_CREATE(MMFF94TorsionParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:3: note: in expansion of macro 'BALL_CREATE'
  422 |   BALL_CREATE(MMFF94PlaneParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/PLP.h:12,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/PLP.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:431:32: note: because 'BALL::MMFF94PlaneParameters' has user-provided 'const BALL::MMFF94PlaneParameters& BALL::MMFF94PlaneParameters::operator=(const BALL::MMFF94PlaneParameters&)'
  431 |   const MMFF94PlaneParameters& operator = (const MMFF94PlaneParameters& param)
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:414:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  414 |  class BALL_EXPORT MMFF94PlaneParameters
      |                    ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/PLP.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/PLP.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:3: note: in expansion of macro 'BALL_CREATE'
  422 |   BALL_CREATE(MMFF94PlaneParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:3: note: in expansion of macro 'BALL_CREATE'
  473 |   BALL_CREATE(MMFF94VDWParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/PLP.h:12,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/PLP.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:482:30: note: because 'BALL::MMFF94VDWParameters' has user-provided 'const BALL::MMFF94VDWParameters& BALL::MMFF94VDWParameters::operator=(const BALL::MMFF94VDWParameters&)'
  482 |   const MMFF94VDWParameters& operator = (const MMFF94VDWParameters& param)
      |                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:458:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  458 |  class BALL_EXPORT MMFF94VDWParameters
      |                    ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/PLP.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/PLP.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:3: note: in expansion of macro 'BALL_CREATE'
  473 |   BALL_CREATE(MMFF94VDWParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94ESParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:3: note: in expansion of macro 'BALL_CREATE'
  530 |   BALL_CREATE(MMFF94ESParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/PLP.h:12,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/PLP.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:539:29: note: because 'BALL::MMFF94ESParameters' has user-provided 'const BALL::MMFF94ESParameters& BALL::MMFF94ESParameters::operator=(const BALL::MMFF94ESParameters&)'
  539 |   const MMFF94ESParameters& operator = (const MMFF94ESParameters& param)
      |                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:525:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  525 |  class BALL_EXPORT MMFF94ESParameters
      |                    ^~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/PLP.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/PLP.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94ESParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:3: note: in expansion of macro 'BALL_CREATE'
  530 |   BALL_CREATE(MMFF94ESParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/PLP.C: In member function 'const BALL::PLP& BALL::PLP::operator=(const BALL::PLP&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/PLP.C:147:32: warning: implicitly-declared 'BALL::ForceFieldComponent& BALL::ForceFieldComponent::operator=(const BALL::ForceFieldComponent&)' is deprecated [-Wdeprecated-copy]
  147 |  ForceFieldComponent::operator = (anb);
      |                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/PLP.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/PLP.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:61:3: note: because 'BALL::ForceFieldComponent' has user-provided 'BALL::ForceFieldComponent::ForceFieldComponent(const BALL::ForceFieldComponent&)'
   61 |   ForceFieldComponent(const ForceFieldComponent& force_field_component);
      |   ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h: In member function 'BALL::ForceFieldComponent& BALL::ForceFieldComponent::operator=(const BALL::ForceFieldComponent&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:34:20: warning: implicitly-declared 'BALL::ScoringComponent& BALL::ScoringComponent::operator=(const BALL::ScoringComponent&)' is deprecated [-Wdeprecated-copy]
   34 |  class BALL_EXPORT ForceFieldComponent : public ScoringComponent
      |                    ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:24,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/PLP.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/PLP.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:26:4: note: because 'BALL::ScoringComponent' has user-provided 'BALL::ScoringComponent::ScoringComponent(const BALL::ScoringComponent&)'
   26 |    ScoringComponent(const ScoringComponent& sc);
      |    ^~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/PLP.C: In member function 'const BALL::PLP& BALL::PLP::operator=(const BALL::PLP&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/PLP.C:147:32: note: synthesized method 'BALL::ForceFieldComponent& BALL::ForceFieldComponent::operator=(const BALL::ForceFieldComponent&)' first required here
  147 |  ForceFieldComponent::operator = (anb);
      |                                ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/PLP.C:147:38: warning: implicitly-declared 'BALL::ForceFieldComponent& BALL::ForceFieldComponent::operator=(const BALL::ForceFieldComponent&)' is deprecated [-Wdeprecated-copy]
  147 |  ForceFieldComponent::operator = (anb);
      |                                      ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/PLP.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/PLP.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:61:3: note: because 'BALL::ForceFieldComponent' has user-provided 'BALL::ForceFieldComponent::ForceFieldComponent(const BALL::ForceFieldComponent&)'
   61 |   ForceFieldComponent(const ForceFieldComponent& force_field_component);
      |   ^~~~~~~~~~~~~~~~~~~
[ 61%] Building CXX object CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/rotationalEntropy.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/rotationalEntropy.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/rotationalEntropy.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/rotationalEntropy.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/rotationalEntropy.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/rotationalEntropy.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/rotationalEntropy.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/rotationalEntropy.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/rotationalEntropy.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/rotationalEntropy.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/rotationalEntropy.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/rotationalEntropy.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/rotationalEntropy.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/rotationalEntropy.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/rotationalEntropy.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 61%] Building CXX object CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/solvation.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/solvation.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/solvation.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/solvation.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/solvation.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/solvation.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/solvation.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/solvation.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/solvation.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/solvation.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/solvation.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/solvation.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/solvation.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/solvation.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/solvation.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 61%] Building CXX object CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/nonpolarSolvation.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/nonpolarSolvation.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/nonpolarSolvation.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/nonpolarSolvation.h:6,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/nonpolarSolvation.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/nonpolarSolvation.h:6,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/nonpolarSolvation.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/nonpolarSolvation.h:6,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/nonpolarSolvation.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/nonpolarSolvation.h:6,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/nonpolarSolvation.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/nonpolarSolvation.h:6,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/nonpolarSolvation.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/nonpolarSolvation.h:6,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/nonpolarSolvation.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/nonpolarSolvation.C: In member function 'virtual double BALL::NonpolarSolvation::updateScore()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/nonpolarSolvation.C:406:54: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  406 |   src = getScoringFunction()->getLigand()->beginAtom();
      |                                                      ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/nonpolarSolvation.h:6,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/nonpolarSolvation.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/nonpolarSolvation.C:407:27: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  407 |   dst = ligand_.beginAtom();
      |                           ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/nonpolarSolvation.h:6,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/nonpolarSolvation.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/nonpolarSolvation.C: In member function 'virtual double BALL::NonpolarSolvation::updateScore()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/nonpolarSolvation.C:407:27: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' first required here
  407 |   dst = ligand_.beginAtom();
      |                           ^
[ 61%] Building CXX object CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/polarSolvation.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/polarSolvation.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/polarSolvation.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/polarSolvation.h:6,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/polarSolvation.C:3:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/polarSolvation.h:6,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/polarSolvation.C:3:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/polarSolvation.h:6,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/polarSolvation.C:3:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/polarSolvation.h:6,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/polarSolvation.C:3:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/polarSolvation.h:6,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/polarSolvation.C:3:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/polarSolvation.h:6,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/polarSolvation.C:3:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/polarSolvation.C: In member function 'virtual double BALL::PolarSolvation::updateScore()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/polarSolvation.C:261:54: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  261 |   src = getScoringFunction()->getLigand()->beginAtom();
      |                                                      ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/polarSolvation.h:6,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/polarSolvation.C:3:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/polarSolvation.C:262:34: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   dst = desolv_ligand_.beginAtom();
      |                                  ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/polarSolvation.h:6,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/polarSolvation.C:3:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/polarSolvation.C: In member function 'virtual double BALL::PolarSolvation::updateScore()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/polarSolvation.C:262:34: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' first required here
  262 |   dst = desolv_ligand_.beginAtom();
      |                                  ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/polarSolvation.C:457:37: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  457 |      it = desolv_protein_.beginAtom();
      |                                     ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/polarSolvation.h:6,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/polarSolvation.C:3:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/polarSolvation.C: In member function 'bool BALL::PolarSolvation::computeFullCycle_(BALL::System&, BALL::Molecule&, BALL::Molecule&, float&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/polarSolvation.C:768:30: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  768 |   for (it = ligand.beginAtom(); +it; ++it)
      |                              ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/polarSolvation.h:6,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/polarSolvation.C:3:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/polarSolvation.C:795:31: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  795 |   for (it = protein.beginAtom(); +it; ++it)
      |                               ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/polarSolvation.h:6,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/polarSolvation.C:3:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/polarSolvation.C:832:30: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  832 |   for (it = ligand.beginAtom(); +it; ++it)
      |                              ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/polarSolvation.h:6,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/polarSolvation.C:3:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/polarSolvation.C:851:30: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  851 |   for (it = ligand.beginAtom(); +it; ++it)
      |                              ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/polarSolvation.h:6,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/polarSolvation.C:3:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/polarSolvation.C:874:31: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  874 |   for (it = protein.beginAtom(); +it; ++it)
      |                               ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/polarSolvation.h:6,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/polarSolvation.C:3:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/polarSolvation.C:905:25: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  905 |   it = system.beginAtom();
      |                         ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/polarSolvation.h:6,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/polarSolvation.C:3:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 61%] Building CXX object CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/vanDerWaals.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/vanDerWaals.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/vanDerWaals.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/moleculeIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:24,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/AMBER/amberNonBonded.h:23,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/vanDerWaals.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/vanDerWaals.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/parameterSection.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/PARAMETER/lennardJones.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/AMBER/amberNonBonded.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/vanDerWaals.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/vanDerWaals.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/moleculeIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:24,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/AMBER/amberNonBonded.h:23,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/vanDerWaals.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/vanDerWaals.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/parameterSection.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/PARAMETER/lennardJones.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/AMBER/amberNonBonded.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/vanDerWaals.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/vanDerWaals.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/moleculeIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:24,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/AMBER/amberNonBonded.h:23,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/vanDerWaals.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/vanDerWaals.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/parameterSection.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/PARAMETER/lennardJones.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/AMBER/amberNonBonded.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/vanDerWaals.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/vanDerWaals.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 61%] Building CXX object CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/vanDerWaalsSlick.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/vanDerWaalsSlick.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/vanDerWaalsSlick.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/vanDerWaalsSlick.h:7,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/vanDerWaalsSlick.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/vanDerWaalsSlick.h:7,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/vanDerWaalsSlick.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/vanDerWaalsSlick.h:7,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/vanDerWaalsSlick.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/vanDerWaalsSlick.h:7,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/vanDerWaalsSlick.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/vanDerWaalsSlick.h:7,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/vanDerWaalsSlick.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/vanDerWaalsSlick.h:7,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/vanDerWaalsSlick.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/vanDerWaalsSlick.C: In member function 'virtual double BALL::VanDerWaalsSlick::updateScore()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/vanDerWaalsSlick.C:658:54: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  658 |   src = getScoringFunction()->getLigand()->beginAtom();
      |                                                      ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/vanDerWaalsSlick.h:7,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/vanDerWaalsSlick.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/vanDerWaalsSlick.C:659:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  659 |   dst = vdw_ligand_->beginAtom();
      |                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/vanDerWaalsSlick.h:7,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/vanDerWaalsSlick.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/vanDerWaalsSlick.C: In member function 'virtual double BALL::VanDerWaalsSlick::updateScore()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/vanDerWaalsSlick.C:659:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' first required here
  659 |   dst = vdw_ligand_->beginAtom();
      |                                ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/vanDerWaalsSlick.C:683:33: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  683 |   it = vdw_receptor_->beginAtom();
      |                                 ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/vanDerWaalsSlick.h:7,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/vanDerWaalsSlick.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/vanDerWaalsSlick.C:697:31: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  697 |   it = vdw_ligand_->beginAtom();
      |                               ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/vanDerWaalsSlick.h:7,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/vanDerWaalsSlick.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 61%] Building CXX object CMakeFiles/BALL.dir/source/SCORING/FUNCTIONS/rescoring.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/SCORING/FUNCTIONS/rescoring.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/FUNCTIONS/rescoring.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/rescoring.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/FUNCTIONS/rescoring.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/rescoring.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/FUNCTIONS/rescoring.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/rescoring.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/FUNCTIONS/rescoring.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/rescoring.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/FUNCTIONS/rescoring.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/rescoring.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/FUNCTIONS/rescoring.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/rescoring.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/FUNCTIONS/rescoring.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 61%] Building CXX object CMakeFiles/BALL.dir/source/SCORING/FUNCTIONS/rescoring1D.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/SCORING/FUNCTIONS/rescoring1D.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/FUNCTIONS/rescoring1D.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/rescoring.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/rescoring1D.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/FUNCTIONS/rescoring1D.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/rescoring.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/rescoring1D.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/FUNCTIONS/rescoring1D.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/rescoring.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/rescoring1D.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/FUNCTIONS/rescoring1D.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/rescoring.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/rescoring1D.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/FUNCTIONS/rescoring1D.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/rescoring.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/rescoring1D.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/FUNCTIONS/rescoring1D.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/rescoring.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/rescoring1D.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/FUNCTIONS/rescoring1D.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 66%] Building CXX object CMakeFiles/BALL.dir/source/SCORING/FUNCTIONS/rescoring3D.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/SCORING/FUNCTIONS/rescoring3D.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/FUNCTIONS/rescoring3D.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/rescoring.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/rescoring3D.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/FUNCTIONS/rescoring3D.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/rescoring.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/rescoring3D.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/FUNCTIONS/rescoring3D.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/rescoring.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/rescoring3D.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/FUNCTIONS/rescoring3D.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/rescoring.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/rescoring3D.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/FUNCTIONS/rescoring3D.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/rescoring.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/rescoring3D.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/FUNCTIONS/rescoring3D.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/rescoring.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/rescoring3D.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/FUNCTIONS/rescoring3D.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/FUNCTIONS/rescoring3D.C: In member function 'std::__cxx11::list<std::pair<BALL::String, BALL::TRegularData3D<float>*> > BALL::Rescoring3D::generateRegularData3DGrids()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/FUNCTIONS/rescoring3D.C:112:30: warning: comparison of integer expressions of different signedness: 'BALL::Size' {aka 'unsigned int'} and 'Eigen::Index' {aka 'int'} [-Wsign-compare]
  112 |     if (sizeX_*sizeY_*sizeZ_ < coefficients->rows())
      |         ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/rescoring.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/rescoring3D.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/FUNCTIONS/rescoring3D.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h: In instantiation of 'BALL::Index BALL::HashGrid3<Item>::getIndex_(const BALL::HashGridBox3<Item>&) const [with Item = BALL::Atom*; BALL::Index = int]':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:1667:20:   required from 'void BALL::HashGrid3<Item>::dump(std::ostream&, BALL::Size) const [with Item = BALL::Atom*; std::ostream = std::basic_ostream<char>; BALL::Size = unsigned int]'
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:1625:7:   required from here
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:1726:46: warning: comparison of integer expressions of different signedness: 'int' and 'BALL::Size' {aka 'unsigned int'} [-Wsign-compare]
 1726 |   if ((&box < &box_[0]) || (&box - &box_[0]  >= getSize()))
      |                            ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~
[ 66%] Building CXX object CMakeFiles/BALL.dir/source/SCORING/FUNCTIONS/rescoring4D.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/SCORING/FUNCTIONS/rescoring4D.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/FUNCTIONS/rescoring4D.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/rescoring.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/rescoring3D.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/rescoring4D.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/FUNCTIONS/rescoring4D.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/rescoring.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/rescoring3D.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/rescoring4D.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/FUNCTIONS/rescoring4D.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/rescoring.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/rescoring3D.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/rescoring4D.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/FUNCTIONS/rescoring4D.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/rescoring.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/rescoring3D.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/rescoring4D.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/FUNCTIONS/rescoring4D.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/rescoring.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/rescoring3D.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/rescoring4D.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/FUNCTIONS/rescoring4D.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/rescoring.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/rescoring3D.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/rescoring4D.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/FUNCTIONS/rescoring4D.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 66%] Building CXX object CMakeFiles/BALL.dir/source/SCORING/FUNCTIONS/amberEvaluation.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/SCORING/FUNCTIONS/amberEvaluation.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/FUNCTIONS/amberEvaluation.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/conformationSet.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/energeticEvaluation.h:8,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/forceFieldEvaluation.h:8,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/amberEvaluation.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/FUNCTIONS/amberEvaluation.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/conformationSet.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/energeticEvaluation.h:8,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/forceFieldEvaluation.h:8,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/amberEvaluation.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/FUNCTIONS/amberEvaluation.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/conformationSet.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/energeticEvaluation.h:8,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/forceFieldEvaluation.h:8,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/amberEvaluation.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/FUNCTIONS/amberEvaluation.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/conformationSet.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/energeticEvaluation.h:8,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/forceFieldEvaluation.h:8,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/amberEvaluation.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/FUNCTIONS/amberEvaluation.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/conformationSet.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/energeticEvaluation.h:8,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/forceFieldEvaluation.h:8,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/amberEvaluation.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/FUNCTIONS/amberEvaluation.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/conformationSet.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/energeticEvaluation.h:8,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/forceFieldEvaluation.h:8,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/amberEvaluation.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/FUNCTIONS/amberEvaluation.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 66%] Building CXX object CMakeFiles/BALL.dir/source/SCORING/FUNCTIONS/energeticEvaluation.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/SCORING/FUNCTIONS/energeticEvaluation.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/FUNCTIONS/energeticEvaluation.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/conformationSet.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/energeticEvaluation.h:8,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/FUNCTIONS/energeticEvaluation.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/conformationSet.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/energeticEvaluation.h:8,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/FUNCTIONS/energeticEvaluation.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/conformationSet.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/energeticEvaluation.h:8,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/FUNCTIONS/energeticEvaluation.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/conformationSet.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/energeticEvaluation.h:8,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/FUNCTIONS/energeticEvaluation.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/conformationSet.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/energeticEvaluation.h:8,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/FUNCTIONS/energeticEvaluation.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/conformationSet.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/energeticEvaluation.h:8,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/FUNCTIONS/energeticEvaluation.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 66%] Building CXX object CMakeFiles/BALL.dir/source/SCORING/FUNCTIONS/forceFieldEvaluation.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/SCORING/FUNCTIONS/forceFieldEvaluation.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/FUNCTIONS/forceFieldEvaluation.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/conformationSet.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/energeticEvaluation.h:8,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/forceFieldEvaluation.h:8,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/FUNCTIONS/forceFieldEvaluation.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/conformationSet.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/energeticEvaluation.h:8,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/forceFieldEvaluation.h:8,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/FUNCTIONS/forceFieldEvaluation.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/conformationSet.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/energeticEvaluation.h:8,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/forceFieldEvaluation.h:8,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/FUNCTIONS/forceFieldEvaluation.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/conformationSet.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/energeticEvaluation.h:8,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/forceFieldEvaluation.h:8,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/FUNCTIONS/forceFieldEvaluation.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/conformationSet.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/energeticEvaluation.h:8,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/forceFieldEvaluation.h:8,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/FUNCTIONS/forceFieldEvaluation.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/conformationSet.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/energeticEvaluation.h:8,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/forceFieldEvaluation.h:8,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/FUNCTIONS/forceFieldEvaluation.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 66%] Building CXX object CMakeFiles/BALL.dir/source/SCORING/FUNCTIONS/gridedMM.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/SCORING/FUNCTIONS/gridedMM.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/FUNCTIONS/gridedMM.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/gridBasedScoring.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/diffGridBasedScoring.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/gridedMM.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/FUNCTIONS/gridedMM.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/gridBasedScoring.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/diffGridBasedScoring.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/gridedMM.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/FUNCTIONS/gridedMM.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/gridBasedScoring.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/diffGridBasedScoring.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/gridedMM.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/FUNCTIONS/gridedMM.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/gridBasedScoring.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/diffGridBasedScoring.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/gridedMM.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/FUNCTIONS/gridedMM.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/gridBasedScoring.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/diffGridBasedScoring.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/gridedMM.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/FUNCTIONS/gridedMM.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/gridBasedScoring.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/diffGridBasedScoring.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/gridedMM.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/FUNCTIONS/gridedMM.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 66%] Building CXX object CMakeFiles/BALL.dir/source/SCORING/FUNCTIONS/MMScoring.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/SCORING/FUNCTIONS/MMScoring.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/FUNCTIONS/MMScoring.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/diffScoringFunction.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/MMScoring.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/FUNCTIONS/MMScoring.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/diffScoringFunction.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/MMScoring.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/FUNCTIONS/MMScoring.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/diffScoringFunction.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/MMScoring.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/FUNCTIONS/MMScoring.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/diffScoringFunction.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/MMScoring.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/FUNCTIONS/MMScoring.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/diffScoringFunction.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/MMScoring.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/FUNCTIONS/MMScoring.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/diffScoringFunction.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/MMScoring.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/FUNCTIONS/MMScoring.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 66%] Building CXX object CMakeFiles/BALL.dir/source/SCORING/FUNCTIONS/gridedPLP.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/SCORING/FUNCTIONS/gridedPLP.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/FUNCTIONS/gridedPLP.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/gridBasedScoring.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/diffGridBasedScoring.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/gridedPLP.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/FUNCTIONS/gridedPLP.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/gridBasedScoring.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/diffGridBasedScoring.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/gridedPLP.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/FUNCTIONS/gridedPLP.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/gridBasedScoring.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/diffGridBasedScoring.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/gridedPLP.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/FUNCTIONS/gridedPLP.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/gridBasedScoring.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/diffGridBasedScoring.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/gridedPLP.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/FUNCTIONS/gridedPLP.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/gridBasedScoring.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/diffGridBasedScoring.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/gridedPLP.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/FUNCTIONS/gridedPLP.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/gridBasedScoring.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/diffGridBasedScoring.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/gridedPLP.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/FUNCTIONS/gridedPLP.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/gridBasedScoring.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/diffGridBasedScoring.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/gridedPLP.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/FUNCTIONS/gridedPLP.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94ParametersBase::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:43:3: note: in expansion of macro 'BALL_CREATE'
   43 |   BALL_CREATE(MMFF94ParametersBase)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/gridedPLP.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/FUNCTIONS/gridedPLP.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/gridBasedScoring.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/diffGridBasedScoring.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/gridedPLP.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/FUNCTIONS/gridedPLP.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:3: note: in expansion of macro 'BALL_CREATE'
  217 |   BALL_CREATE(MMFF94StretchParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/gridedPLP.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/FUNCTIONS/gridedPLP.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:226:34: note: because 'BALL::MMFF94StretchParameters' has user-provided 'const BALL::MMFF94StretchParameters& BALL::MMFF94StretchParameters::operator=(const BALL::MMFF94StretchParameters&)'
  226 |   const MMFF94StretchParameters& operator = (const MMFF94StretchParameters& param)
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:185:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  185 |  class BALL_EXPORT MMFF94StretchParameters:
      |                    ^~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/gridBasedScoring.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/diffGridBasedScoring.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/gridedPLP.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/FUNCTIONS/gridedPLP.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:3: note: in expansion of macro 'BALL_CREATE'
  217 |   BALL_CREATE(MMFF94StretchParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94BendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:3: note: in expansion of macro 'BALL_CREATE'
  271 |   BALL_CREATE(MMFF94BendParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/gridedPLP.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/FUNCTIONS/gridedPLP.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:280:31: note: because 'BALL::MMFF94BendParameters' has user-provided 'const BALL::MMFF94BendParameters& BALL::MMFF94BendParameters::operator=(const BALL::MMFF94BendParameters&)'
  280 |   const MMFF94BendParameters& operator = (const MMFF94BendParameters& param)
      |                               ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:263:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  263 |  class BALL_EXPORT MMFF94BendParameters
      |                    ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/gridBasedScoring.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/diffGridBasedScoring.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/gridedPLP.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/FUNCTIONS/gridedPLP.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94BendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:3: note: in expansion of macro 'BALL_CREATE'
  271 |   BALL_CREATE(MMFF94BendParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:3: note: in expansion of macro 'BALL_CREATE'
  318 |   BALL_CREATE(MMFF94StretchBendParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/gridedPLP.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/FUNCTIONS/gridedPLP.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:327:38: note: because 'BALL::MMFF94StretchBendParameters' has user-provided 'const BALL::MMFF94StretchBendParameters& BALL::MMFF94StretchBendParameters::operator=(const BALL::MMFF94StretchBendParameters&)'
  327 |   const MMFF94StretchBendParameters& operator = (const MMFF94StretchBendParameters& param)
      |                                      ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:310:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  310 |  class BALL_EXPORT MMFF94StretchBendParameters
      |                    ^~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/gridBasedScoring.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/diffGridBasedScoring.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/gridedPLP.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/FUNCTIONS/gridedPLP.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:3: note: in expansion of macro 'BALL_CREATE'
  318 |   BALL_CREATE(MMFF94StretchBendParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:3: note: in expansion of macro 'BALL_CREATE'
  374 |   BALL_CREATE(MMFF94TorsionParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/gridedPLP.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/FUNCTIONS/gridedPLP.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:383:34: note: because 'BALL::MMFF94TorsionParameters' has user-provided 'const BALL::MMFF94TorsionParameters& BALL::MMFF94TorsionParameters::operator=(const BALL::MMFF94TorsionParameters&)'
  383 |   const MMFF94TorsionParameters& operator = (const MMFF94TorsionParameters& param)
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:366:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  366 |  class BALL_EXPORT MMFF94TorsionParameters
      |                    ^~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/gridBasedScoring.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/diffGridBasedScoring.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/gridedPLP.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/FUNCTIONS/gridedPLP.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:3: note: in expansion of macro 'BALL_CREATE'
  374 |   BALL_CREATE(MMFF94TorsionParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:3: note: in expansion of macro 'BALL_CREATE'
  422 |   BALL_CREATE(MMFF94PlaneParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/gridedPLP.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/FUNCTIONS/gridedPLP.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:431:32: note: because 'BALL::MMFF94PlaneParameters' has user-provided 'const BALL::MMFF94PlaneParameters& BALL::MMFF94PlaneParameters::operator=(const BALL::MMFF94PlaneParameters&)'
  431 |   const MMFF94PlaneParameters& operator = (const MMFF94PlaneParameters& param)
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:414:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  414 |  class BALL_EXPORT MMFF94PlaneParameters
      |                    ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/gridBasedScoring.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/diffGridBasedScoring.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/gridedPLP.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/FUNCTIONS/gridedPLP.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:3: note: in expansion of macro 'BALL_CREATE'
  422 |   BALL_CREATE(MMFF94PlaneParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:3: note: in expansion of macro 'BALL_CREATE'
  473 |   BALL_CREATE(MMFF94VDWParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/gridedPLP.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/FUNCTIONS/gridedPLP.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:482:30: note: because 'BALL::MMFF94VDWParameters' has user-provided 'const BALL::MMFF94VDWParameters& BALL::MMFF94VDWParameters::operator=(const BALL::MMFF94VDWParameters&)'
  482 |   const MMFF94VDWParameters& operator = (const MMFF94VDWParameters& param)
      |                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:458:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  458 |  class BALL_EXPORT MMFF94VDWParameters
      |                    ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/gridBasedScoring.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/diffGridBasedScoring.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/gridedPLP.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/FUNCTIONS/gridedPLP.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:3: note: in expansion of macro 'BALL_CREATE'
  473 |   BALL_CREATE(MMFF94VDWParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94ESParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:3: note: in expansion of macro 'BALL_CREATE'
  530 |   BALL_CREATE(MMFF94ESParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/gridedPLP.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/FUNCTIONS/gridedPLP.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:539:29: note: because 'BALL::MMFF94ESParameters' has user-provided 'const BALL::MMFF94ESParameters& BALL::MMFF94ESParameters::operator=(const BALL::MMFF94ESParameters&)'
  539 |   const MMFF94ESParameters& operator = (const MMFF94ESParameters& param)
      |                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:525:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  525 |  class BALL_EXPORT MMFF94ESParameters
      |                    ^~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/gridBasedScoring.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/diffGridBasedScoring.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/gridedPLP.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/FUNCTIONS/gridedPLP.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94ESParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:3: note: in expansion of macro 'BALL_CREATE'
  530 |   BALL_CREATE(MMFF94ESParameters)
      |   ^~~~~~~~~~~
[ 66%] Building CXX object CMakeFiles/BALL.dir/source/SCORING/FUNCTIONS/PLPScoring.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/SCORING/FUNCTIONS/PLPScoring.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/FUNCTIONS/PLPScoring.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/PLPScoring.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/FUNCTIONS/PLPScoring.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/PLPScoring.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/FUNCTIONS/PLPScoring.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/PLPScoring.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/FUNCTIONS/PLPScoring.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/PLPScoring.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/FUNCTIONS/PLPScoring.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/PLPScoring.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/FUNCTIONS/PLPScoring.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/PLPScoring.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/FUNCTIONS/PLPScoring.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/PLPScoring.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/FUNCTIONS/PLPScoring.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94ParametersBase::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:43:3: note: in expansion of macro 'BALL_CREATE'
   43 |   BALL_CREATE(MMFF94ParametersBase)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/PLPScoring.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/FUNCTIONS/PLPScoring.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/PLPScoring.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/FUNCTIONS/PLPScoring.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:3: note: in expansion of macro 'BALL_CREATE'
  217 |   BALL_CREATE(MMFF94StretchParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/PLPScoring.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/FUNCTIONS/PLPScoring.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:226:34: note: because 'BALL::MMFF94StretchParameters' has user-provided 'const BALL::MMFF94StretchParameters& BALL::MMFF94StretchParameters::operator=(const BALL::MMFF94StretchParameters&)'
  226 |   const MMFF94StretchParameters& operator = (const MMFF94StretchParameters& param)
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:185:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  185 |  class BALL_EXPORT MMFF94StretchParameters:
      |                    ^~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/PLPScoring.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/FUNCTIONS/PLPScoring.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:3: note: in expansion of macro 'BALL_CREATE'
  217 |   BALL_CREATE(MMFF94StretchParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94BendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:3: note: in expansion of macro 'BALL_CREATE'
  271 |   BALL_CREATE(MMFF94BendParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/PLPScoring.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/FUNCTIONS/PLPScoring.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:280:31: note: because 'BALL::MMFF94BendParameters' has user-provided 'const BALL::MMFF94BendParameters& BALL::MMFF94BendParameters::operator=(const BALL::MMFF94BendParameters&)'
  280 |   const MMFF94BendParameters& operator = (const MMFF94BendParameters& param)
      |                               ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:263:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  263 |  class BALL_EXPORT MMFF94BendParameters
      |                    ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/PLPScoring.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/FUNCTIONS/PLPScoring.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94BendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:3: note: in expansion of macro 'BALL_CREATE'
  271 |   BALL_CREATE(MMFF94BendParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:3: note: in expansion of macro 'BALL_CREATE'
  318 |   BALL_CREATE(MMFF94StretchBendParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/PLPScoring.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/FUNCTIONS/PLPScoring.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:327:38: note: because 'BALL::MMFF94StretchBendParameters' has user-provided 'const BALL::MMFF94StretchBendParameters& BALL::MMFF94StretchBendParameters::operator=(const BALL::MMFF94StretchBendParameters&)'
  327 |   const MMFF94StretchBendParameters& operator = (const MMFF94StretchBendParameters& param)
      |                                      ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:310:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  310 |  class BALL_EXPORT MMFF94StretchBendParameters
      |                    ^~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/PLPScoring.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/FUNCTIONS/PLPScoring.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:3: note: in expansion of macro 'BALL_CREATE'
  318 |   BALL_CREATE(MMFF94StretchBendParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:3: note: in expansion of macro 'BALL_CREATE'
  374 |   BALL_CREATE(MMFF94TorsionParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/PLPScoring.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/FUNCTIONS/PLPScoring.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:383:34: note: because 'BALL::MMFF94TorsionParameters' has user-provided 'const BALL::MMFF94TorsionParameters& BALL::MMFF94TorsionParameters::operator=(const BALL::MMFF94TorsionParameters&)'
  383 |   const MMFF94TorsionParameters& operator = (const MMFF94TorsionParameters& param)
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:366:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  366 |  class BALL_EXPORT MMFF94TorsionParameters
      |                    ^~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/PLPScoring.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/FUNCTIONS/PLPScoring.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:3: note: in expansion of macro 'BALL_CREATE'
  374 |   BALL_CREATE(MMFF94TorsionParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:3: note: in expansion of macro 'BALL_CREATE'
  422 |   BALL_CREATE(MMFF94PlaneParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/PLPScoring.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/FUNCTIONS/PLPScoring.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:431:32: note: because 'BALL::MMFF94PlaneParameters' has user-provided 'const BALL::MMFF94PlaneParameters& BALL::MMFF94PlaneParameters::operator=(const BALL::MMFF94PlaneParameters&)'
  431 |   const MMFF94PlaneParameters& operator = (const MMFF94PlaneParameters& param)
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:414:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  414 |  class BALL_EXPORT MMFF94PlaneParameters
      |                    ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/PLPScoring.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/FUNCTIONS/PLPScoring.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:3: note: in expansion of macro 'BALL_CREATE'
  422 |   BALL_CREATE(MMFF94PlaneParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:3: note: in expansion of macro 'BALL_CREATE'
  473 |   BALL_CREATE(MMFF94VDWParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/PLPScoring.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/FUNCTIONS/PLPScoring.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:482:30: note: because 'BALL::MMFF94VDWParameters' has user-provided 'const BALL::MMFF94VDWParameters& BALL::MMFF94VDWParameters::operator=(const BALL::MMFF94VDWParameters&)'
  482 |   const MMFF94VDWParameters& operator = (const MMFF94VDWParameters& param)
      |                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:458:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  458 |  class BALL_EXPORT MMFF94VDWParameters
      |                    ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/PLPScoring.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/FUNCTIONS/PLPScoring.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:3: note: in expansion of macro 'BALL_CREATE'
  473 |   BALL_CREATE(MMFF94VDWParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94ESParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:3: note: in expansion of macro 'BALL_CREATE'
  530 |   BALL_CREATE(MMFF94ESParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/PLPScoring.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/FUNCTIONS/PLPScoring.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:539:29: note: because 'BALL::MMFF94ESParameters' has user-provided 'const BALL::MMFF94ESParameters& BALL::MMFF94ESParameters::operator=(const BALL::MMFF94ESParameters&)'
  539 |   const MMFF94ESParameters& operator = (const MMFF94ESParameters& param)
      |                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:525:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  525 |  class BALL_EXPORT MMFF94ESParameters
      |                    ^~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/PLPScoring.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/FUNCTIONS/PLPScoring.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94ESParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:3: note: in expansion of macro 'BALL_CREATE'
  530 |   BALL_CREATE(MMFF94ESParameters)
      |   ^~~~~~~~~~~
[ 66%] Building CXX object CMakeFiles/BALL.dir/source/SCORING/FUNCTIONS/randomEvaluation.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/SCORING/FUNCTIONS/randomEvaluation.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/FUNCTIONS/randomEvaluation.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/conformationSet.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/randomEvaluation.h:8,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/FUNCTIONS/randomEvaluation.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/conformationSet.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/randomEvaluation.h:8,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/FUNCTIONS/randomEvaluation.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/conformationSet.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/randomEvaluation.h:8,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/FUNCTIONS/randomEvaluation.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/conformationSet.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/randomEvaluation.h:8,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/FUNCTIONS/randomEvaluation.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/conformationSet.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/randomEvaluation.h:8,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/FUNCTIONS/randomEvaluation.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/conformationSet.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/randomEvaluation.h:8,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/FUNCTIONS/randomEvaluation.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 66%] Building CXX object CMakeFiles/BALL.dir/source/SCORING/FUNCTIONS/PBScoring.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/SCORING/FUNCTIONS/PBScoring.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/FUNCTIONS/PBScoring.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/PBScoring.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/FUNCTIONS/PBScoring.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/PBScoring.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/FUNCTIONS/PBScoring.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/PBScoring.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/FUNCTIONS/PBScoring.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/PBScoring.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/FUNCTIONS/PBScoring.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/PBScoring.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/FUNCTIONS/PBScoring.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/PBScoring.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/FUNCTIONS/PBScoring.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 66%] Building CXX object CMakeFiles/BALL.dir/source/SCORING/FUNCTIONS/slickEnergy.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/SCORING/FUNCTIONS/slickEnergy.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/FUNCTIONS/slickEnergy.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/slickEnergy.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/FUNCTIONS/slickEnergy.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/slickEnergy.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/FUNCTIONS/slickEnergy.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/slickEnergy.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/FUNCTIONS/slickEnergy.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/slickEnergy.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/FUNCTIONS/slickEnergy.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/slickEnergy.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/FUNCTIONS/slickEnergy.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/slickEnergy.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/FUNCTIONS/slickEnergy.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 66%] Building CXX object CMakeFiles/BALL.dir/source/SCORING/FUNCTIONS/slickScore.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/SCORING/FUNCTIONS/slickScore.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/FUNCTIONS/slickScore.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/slickScore.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/FUNCTIONS/slickScore.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/slickScore.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/FUNCTIONS/slickScore.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/slickScore.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/FUNCTIONS/slickScore.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/slickScore.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/FUNCTIONS/slickScore.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/slickScore.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/FUNCTIONS/slickScore.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/slickScore.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/FUNCTIONS/slickScore.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 66%] Building CXX object CMakeFiles/BALL.dir/source/SOLVATION/claverieParameter.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/SOLVATION/claverieParameter.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SOLVATION/claverieParameter.C
[ 66%] Building CXX object CMakeFiles/BALL.dir/source/SOLVATION/electrostaticPotentialCalculator.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/SOLVATION/electrostaticPotentialCalculator.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SOLVATION/electrostaticPotentialCalculator.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SOLVATION/electrostaticPotentialCalculator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SOLVATION/electrostaticPotentialCalculator.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SOLVATION/electrostaticPotentialCalculator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SOLVATION/electrostaticPotentialCalculator.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SOLVATION/electrostaticPotentialCalculator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SOLVATION/electrostaticPotentialCalculator.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SOLVATION/electrostaticPotentialCalculator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SOLVATION/electrostaticPotentialCalculator.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SOLVATION/electrostaticPotentialCalculator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SOLVATION/electrostaticPotentialCalculator.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SOLVATION/electrostaticPotentialCalculator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SOLVATION/electrostaticPotentialCalculator.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SOLVATION/electrostaticPotentialCalculator.C: In member function 'float BALL::ElectrostaticPotentialCalculator::operator()(const Vector3&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SOLVATION/electrostaticPotentialCalculator.C:64:31: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   64 |    for (atIt=mySys_.beginAtom();+atIt;++atIt)
      |                               ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SOLVATION/electrostaticPotentialCalculator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SOLVATION/electrostaticPotentialCalculator.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SOLVATION/electrostaticPotentialCalculator.C: In member function 'float BALL::ElectrostaticPotentialCalculator::operator()(const Vector3&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SOLVATION/electrostaticPotentialCalculator.C:64:31: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' first required here
   64 |    for (atIt=mySys_.beginAtom();+atIt;++atIt)
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SOLVATION/electrostaticPotentialCalculator.C:83:31: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   83 |    for (atIt=mySys_.beginAtom();+atIt;++atIt)
      |                               ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SOLVATION/electrostaticPotentialCalculator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SOLVATION/electrostaticPotentialCalculator.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 66%] Building CXX object CMakeFiles/BALL.dir/source/SOLVATION/generalizedBornCase.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/SOLVATION/generalizedBornCase.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SOLVATION/generalizedBornCase.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SOLVATION/generalizedBornCase.h:19,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SOLVATION/generalizedBornCase.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SOLVATION/generalizedBornCase.h:19,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SOLVATION/generalizedBornCase.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SOLVATION/generalizedBornCase.h:19,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SOLVATION/generalizedBornCase.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SOLVATION/generalizedBornCase.h:19,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SOLVATION/generalizedBornCase.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SOLVATION/generalizedBornCase.h:19,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SOLVATION/generalizedBornCase.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SOLVATION/generalizedBornCase.h:19,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SOLVATION/generalizedBornCase.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SOLVATION/generalizedBornCase.C: In member function 'bool BALL::GeneralizedBornModel::setup(const BALL::AtomContainer&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SOLVATION/generalizedBornCase.C:235:29: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  235 |   for (it1 = ac_->beginAtom(); +it1; ++it1)
      |                             ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SOLVATION/generalizedBornCase.h:19,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SOLVATION/generalizedBornCase.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
[ 66%] Building CXX object CMakeFiles/BALL.dir/source/SOLVATION/molecularSurfaceGrid.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/SOLVATION/molecularSurfaceGrid.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SOLVATION/molecularSurfaceGrid.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SOLVATION/molecularSurfaceGrid.h:19,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SOLVATION/molecularSurfaceGrid.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SOLVATION/molecularSurfaceGrid.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SOLVATION/molecularSurfaceGrid.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SOLVATION/molecularSurfaceGrid.h:19,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SOLVATION/molecularSurfaceGrid.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SOLVATION/molecularSurfaceGrid.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SOLVATION/molecularSurfaceGrid.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SOLVATION/molecularSurfaceGrid.h:19,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SOLVATION/molecularSurfaceGrid.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SOLVATION/molecularSurfaceGrid.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SOLVATION/molecularSurfaceGrid.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SOLVATION/molecularSurfaceGrid.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SOLVATION/molecularSurfaceGrid.C: In function 'BALL::TRegularData3D<char>* BALL::calculateSESGrid(const Vector3&, const Vector3&, float, const BALL::System&, float)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:64:49: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   64 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SOLVATION/molecularSurfaceGrid.C:165:3: note: in expansion of macro 'BALL_FOREACH_ATOM'
  165 |   BALL_FOREACH_ATOM(system, atom_iterator)
      |   ^~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SOLVATION/molecularSurfaceGrid.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SOLVATION/molecularSurfaceGrid.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SOLVATION/molecularSurfaceGrid.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SOLVATION/molecularSurfaceGrid.C: In function 'BALL::TRegularData3D<char>* BALL::calculateSASGrid(const Vector3&, const Vector3&, float, const BALL::System&, float)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:64:49: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   64 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SOLVATION/molecularSurfaceGrid.C:358:3: note: in expansion of macro 'BALL_FOREACH_ATOM'
  358 |   BALL_FOREACH_ATOM(system, atom_iterator)
      |   ^~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SOLVATION/molecularSurfaceGrid.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SOLVATION/molecularSurfaceGrid.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
[ 66%] Building CXX object CMakeFiles/BALL.dir/source/SOLVATION/ooiEnergy.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/SOLVATION/ooiEnergy.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SOLVATION/ooiEnergy.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/geometricProperties.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SOLVATION/ooiEnergy.C:13:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/expressionPredicate.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/expressionTree.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/expressionParser.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/expression.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/ruleEvaluator.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/ruleProcessor.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/typeRuleProcessor.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SOLVATION/ooiEnergy.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SOLVATION/ooiEnergy.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/geometricProperties.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SOLVATION/ooiEnergy.C:13:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/expressionPredicate.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/expressionTree.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/expressionParser.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/expression.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/ruleEvaluator.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/ruleProcessor.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/typeRuleProcessor.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SOLVATION/ooiEnergy.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SOLVATION/ooiEnergy.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/geometricProperties.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SOLVATION/ooiEnergy.C:13:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/expressionPredicate.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/expressionTree.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/expressionParser.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/expression.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/ruleEvaluator.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/ruleProcessor.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/typeRuleProcessor.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SOLVATION/ooiEnergy.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SOLVATION/ooiEnergy.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SOLVATION/ooiEnergy.C: In function 'double BALL::calculateOoiEnergy(BALL::AtomContainer&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SOLVATION/ooiEnergy.C:277:34: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  277 |   for (atom_it = atoms.beginAtom(); +atom_it; ++atom_it)
      |                                  ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/expressionPredicate.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/expressionTree.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/expressionParser.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/expression.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/ruleEvaluator.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/ruleProcessor.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/typeRuleProcessor.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SOLVATION/ooiEnergy.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SOLVATION/ooiEnergy.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SOLVATION/ooiEnergy.C: In function 'double BALL::calculateOoiEnergy(BALL::AtomContainer&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SOLVATION/ooiEnergy.C:277:34: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' first required here
  277 |   for (atom_it = atoms.beginAtom(); +atom_it; ++atom_it)
      |                                  ^
[ 66%] Building CXX object CMakeFiles/BALL.dir/source/SOLVATION/PCMCavFreeEnergyProcessor.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/SOLVATION/PCMCavFreeEnergyProcessor.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SOLVATION/PCMCavFreeEnergyProcessor.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/ENERGY/energyProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SOLVATION/PCMCavFreeEnergyProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SOLVATION/PCMCavFreeEnergyProcessor.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/ENERGY/energyProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SOLVATION/PCMCavFreeEnergyProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SOLVATION/PCMCavFreeEnergyProcessor.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/ENERGY/energyProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SOLVATION/PCMCavFreeEnergyProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SOLVATION/PCMCavFreeEnergyProcessor.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/ENERGY/energyProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SOLVATION/PCMCavFreeEnergyProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SOLVATION/PCMCavFreeEnergyProcessor.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/ENERGY/energyProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SOLVATION/PCMCavFreeEnergyProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SOLVATION/PCMCavFreeEnergyProcessor.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/ENERGY/energyProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SOLVATION/PCMCavFreeEnergyProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SOLVATION/PCMCavFreeEnergyProcessor.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 66%] Building CXX object CMakeFiles/BALL.dir/source/SOLVATION/pierottiCavFreeEnergyProcessor.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/SOLVATION/pierottiCavFreeEnergyProcessor.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SOLVATION/pierottiCavFreeEnergyProcessor.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/ENERGY/energyProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SOLVATION/pierottiCavFreeEnergyProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SOLVATION/pierottiCavFreeEnergyProcessor.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/ENERGY/energyProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SOLVATION/pierottiCavFreeEnergyProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SOLVATION/pierottiCavFreeEnergyProcessor.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/ENERGY/energyProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SOLVATION/pierottiCavFreeEnergyProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SOLVATION/pierottiCavFreeEnergyProcessor.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/ENERGY/energyProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SOLVATION/pierottiCavFreeEnergyProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SOLVATION/pierottiCavFreeEnergyProcessor.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/ENERGY/energyProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SOLVATION/pierottiCavFreeEnergyProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SOLVATION/pierottiCavFreeEnergyProcessor.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/ENERGY/energyProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SOLVATION/pierottiCavFreeEnergyProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SOLVATION/pierottiCavFreeEnergyProcessor.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 66%] Building CXX object CMakeFiles/BALL.dir/source/SOLVATION/pair6_12InteractionEnergyProcessor.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/SOLVATION/pair6_12InteractionEnergyProcessor.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SOLVATION/pair6_12InteractionEnergyProcessor.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/ENERGY/energyProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SOLVATION/pair6_12InteractionEnergyProcessor.h:23,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SOLVATION/pair6_12InteractionEnergyProcessor.C:14:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/surface.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SOLVATION/pair6_12InteractionEnergyProcessor.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/ENERGY/energyProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SOLVATION/pair6_12InteractionEnergyProcessor.h:23,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SOLVATION/pair6_12InteractionEnergyProcessor.C:14:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/surface.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SOLVATION/pair6_12InteractionEnergyProcessor.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/ENERGY/energyProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SOLVATION/pair6_12InteractionEnergyProcessor.h:23,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SOLVATION/pair6_12InteractionEnergyProcessor.C:14:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/surface.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SOLVATION/pair6_12InteractionEnergyProcessor.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SOLVATION/pair6_12InteractionEnergyProcessor.C: In member function 'virtual bool BALL::Pair6_12InteractionEnergyProcessor::finish()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SOLVATION/pair6_12InteractionEnergyProcessor.C:406:48: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  406 |    for (solute_iterator = fragment_->beginAtom(); +solute_iterator;
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/surface.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SOLVATION/pair6_12InteractionEnergyProcessor.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
[ 66%] Building CXX object CMakeFiles/BALL.dir/source/SOLVATION/pair6_12RDFIntegrator.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/SOLVATION/pair6_12RDFIntegrator.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SOLVATION/pair6_12RDFIntegrator.C
[ 66%] Building CXX object CMakeFiles/BALL.dir/source/SOLVATION/pairExpInteractionEnergyProcessor.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/SOLVATION/pairExpInteractionEnergyProcessor.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SOLVATION/pairExpInteractionEnergyProcessor.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/ENERGY/energyProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SOLVATION/pairExpInteractionEnergyProcessor.h:27,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SOLVATION/pairExpInteractionEnergyProcessor.C:12:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/surface.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SOLVATION/pairExpInteractionEnergyProcessor.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/ENERGY/energyProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SOLVATION/pairExpInteractionEnergyProcessor.h:27,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SOLVATION/pairExpInteractionEnergyProcessor.C:12:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/surface.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SOLVATION/pairExpInteractionEnergyProcessor.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/ENERGY/energyProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SOLVATION/pairExpInteractionEnergyProcessor.h:27,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SOLVATION/pairExpInteractionEnergyProcessor.C:12:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/surface.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SOLVATION/pairExpInteractionEnergyProcessor.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SOLVATION/pairExpInteractionEnergyProcessor.C: In member function 'virtual bool BALL::PairExpInteractionEnergyProcessor::finish()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SOLVATION/pairExpInteractionEnergyProcessor.C:315:48: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  315 |    for (solute_iterator = fragment_->beginAtom(); +solute_iterator;
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/surface.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SOLVATION/pairExpInteractionEnergyProcessor.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
[ 66%] Building CXX object CMakeFiles/BALL.dir/source/SOLVATION/pairExpRDFIntegrator.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/SOLVATION/pairExpRDFIntegrator.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SOLVATION/pairExpRDFIntegrator.C
[ 71%] Building CXX object CMakeFiles/BALL.dir/source/SOLVATION/poissonBoltzmann.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/SOLVATION/poissonBoltzmann.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SOLVATION/poissonBoltzmann.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SOLVATION/poissonBoltzmann.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SOLVATION/poissonBoltzmann.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/regularData3D.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SOLVATION/poissonBoltzmann.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SOLVATION/poissonBoltzmann.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SOLVATION/poissonBoltzmann.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SOLVATION/poissonBoltzmann.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/regularData3D.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SOLVATION/poissonBoltzmann.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SOLVATION/poissonBoltzmann.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SOLVATION/poissonBoltzmann.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SOLVATION/poissonBoltzmann.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/regularData3D.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SOLVATION/poissonBoltzmann.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SOLVATION/poissonBoltzmann.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SOLVATION/poissonBoltzmann.C:15:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SOLVATION/poissonBoltzmann.C: In member function 'bool BALL::FDPB::setupAtomArray(BALL::System&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:64:49: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   64 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SOLVATION/poissonBoltzmann.C:267:3: note: in expansion of macro 'BALL_FOREACH_ATOM'
  267 |   BALL_FOREACH_ATOM(system, atom_iterator)
      |   ^~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/regularData3D.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SOLVATION/poissonBoltzmann.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SOLVATION/poissonBoltzmann.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SOLVATION/poissonBoltzmann.C:15:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SOLVATION/poissonBoltzmann.C: In member function 'bool BALL::FDPB::setupAtomArray(BALL::System&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:64:49: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' first required here
   64 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SOLVATION/poissonBoltzmann.C:267:3: note: in expansion of macro 'BALL_FOREACH_ATOM'
  267 |   BALL_FOREACH_ATOM(system, atom_iterator)
      |   ^~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/forwardIterator.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashSet.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/regularData3D.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SOLVATION/poissonBoltzmann.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SOLVATION/poissonBoltzmann.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/baseIterator.h: In instantiation of 'BALL::BaseIterator<Container, DataType, Position, Traits>& BALL::BaseIterator<Container, DataType, Position, Traits>::operator=(const BALL::BaseIterator<Container, DataType, Position, Traits>&) [with Container = BALL::HashGridBox3<BALL::TVector4<float> >; DataType = BALL::HashGridBox3<BALL::TVector4<float> >; Position = unsigned int; Traits = BALL::HashGridBox3<BALL::TVector4<float> >::BoxIteratorTraits]':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/forwardIterator.h:63:68:   required from 'BALL::ConstForwardIterator<Container, DataType, Position, Traits>& BALL::ConstForwardIterator<Container, DataType, Position, Traits>::operator=(const BALL::ConstForwardIterator<Container, DataType, Position, Traits>&) [with Container = BALL::HashGridBox3<BALL::TVector4<float> >; DataType = BALL::HashGridBox3<BALL::TVector4<float> >; Position = unsigned int; Traits = BALL::HashGridBox3<BALL::TVector4<float> >::BoxIteratorTraits]'
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/forwardIterator.h:237:76:   required from 'BALL::ForwardIterator<Container, DataType, Position, Traits>& BALL::ForwardIterator<Container, DataType, Position, Traits>::operator=(const BALL::ForwardIterator<Container, DataType, Position, Traits>&) [with Container = BALL::HashGridBox3<BALL::TVector4<float> >; DataType = BALL::HashGridBox3<BALL::TVector4<float> >; Position = unsigned int; Traits = BALL::HashGridBox3<BALL::TVector4<float> >::BoxIteratorTraits]'
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SOLVATION/poissonBoltzmann.C:571:35:   required from here
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/baseIterator.h:111:12: warning: implicitly-declared 'BALL::HashGridBox3<BALL::TVector4<float> >::BoxIteratorTraits& BALL::HashGridBox3<BALL::TVector4<float> >::BoxIteratorTraits::operator=(const BALL::HashGridBox3<BALL::TVector4<float> >::BoxIteratorTraits&)' is deprecated [-Wdeprecated-copy]
  111 |    traits_ = iterator.traits_;
      |    ~~~~~~~~^~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SOLVATION/poissonBoltzmann.C:13:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:209:4: note: because 'BALL::HashGridBox3<BALL::TVector4<float> >::BoxIteratorTraits' has user-provided 'BALL::HashGridBox3<Item>::BoxIteratorTraits::BoxIteratorTraits(const BALL::HashGridBox3<Item>::BoxIteratorTraits&, bool) [with Item = BALL::TVector4<float>]'
  209 |    BoxIteratorTraits(const BoxIteratorTraits& traits, bool /* deep */ = true)
      |    ^~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h: In instantiation of 'BALL::Index BALL::HashGrid3<Item>::getIndex_(const BALL::HashGridBox3<Item>&) const [with Item = BALL::TVector4<float>; BALL::Index = int]':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:1516:17:   required from 'bool BALL::HashGrid3<Item>::getIndices(const BALL::HashGridBox3<Item>&, BALL::Position&, BALL::Position&, BALL::Position&) const [with Item = BALL::TVector4<float>; BALL::Position = unsigned int]'
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:563:21:   required from 'void BALL::HashGridBox3<Item>::getIndices(BALL::Position&, BALL::Position&, BALL::Position&) [with Item = BALL::TVector4<float>; BALL::Position = unsigned int]'
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:206:13:   required from 'BALL::HashGridBox3<Item>::BoxIteratorTraits::BoxIteratorTraits(const BALL::HashGridBox3<Item>&) [with Item = BALL::TVector4<float>]'
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/baseIterator.h:190:23:   required from 'BALL::BaseIterator<Container, DataType, Position, Traits>::BaseIterator(const Container&) [with Container = BALL::HashGridBox3<BALL::TVector4<float> >; DataType = BALL::HashGridBox3<BALL::TVector4<float> >; Position = unsigned int; Traits = BALL::HashGridBox3<BALL::TVector4<float> >::BoxIteratorTraits]'
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/forwardIterator.h:128:67:   required from 'BALL::ConstForwardIterator<Container, DataType, Position, Traits>::ConstForwardIterator(const Container&) [with Container = BALL::HashGridBox3<BALL::TVector4<float> >; DataType = BALL::HashGridBox3<BALL::TVector4<float> >; Position = unsigned int; Traits = BALL::HashGridBox3<BALL::TVector4<float> >::BoxIteratorTraits]'
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/forwardIterator.h:298:20:   required from 'BALL::ForwardIterator<Container, DataType, Position, Traits>::ForwardIterator(const Container&) [with Container = BALL::HashGridBox3<BALL::TVector4<float> >; DataType = BALL::HashGridBox3<BALL::TVector4<float> >; Position = unsigned int; Traits = BALL::HashGridBox3<BALL::TVector4<float> >::BoxIteratorTraits]'
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/forwardIterator.h:309:19:   required from 'static BALL::ForwardIterator<Container, DataType, Position, Traits> BALL::ForwardIterator<Container, DataType, Position, Traits>::begin(const Container&) [with Container = BALL::HashGridBox3<BALL::TVector4<float> >; DataType = BALL::HashGridBox3<BALL::TVector4<float> >; Position = unsigned int; Traits = BALL::HashGridBox3<BALL::TVector4<float> >::BoxIteratorTraits]'
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:332:29:   required from 'BALL::HashGridBox3<Item>::BoxIterator BALL::HashGridBox3<Item>::beginBox() [with Item = BALL::TVector4<float>; BALL::HashGridBox3<Item>::BoxIterator = BALL::ForwardIterator<BALL::HashGridBox3<BALL::TVector4<float> >, BALL::HashGridBox3<BALL::TVector4<float> >, unsigned int, BALL::HashGridBox3<BALL::TVector4<float> >::BoxIteratorTraits>]'
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SOLVATION/poissonBoltzmann.C:571:35:   required from here
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:1726:46: warning: comparison of integer expressions of different signedness: 'int' and 'BALL::Size' {aka 'unsigned int'} [-Wsign-compare]
 1726 |   if ((&box < &box_[0]) || (&box - &box_[0]  >= getSize()))
      |                            ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~
[ 71%] Building CXX object CMakeFiles/BALL.dir/source/SOLVATION/reissCavFreeEnergyProcessor.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/SOLVATION/reissCavFreeEnergyProcessor.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SOLVATION/reissCavFreeEnergyProcessor.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/ENERGY/energyProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SOLVATION/reissCavFreeEnergyProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SOLVATION/reissCavFreeEnergyProcessor.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/ENERGY/energyProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SOLVATION/reissCavFreeEnergyProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SOLVATION/reissCavFreeEnergyProcessor.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/ENERGY/energyProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SOLVATION/reissCavFreeEnergyProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SOLVATION/reissCavFreeEnergyProcessor.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/ENERGY/energyProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SOLVATION/reissCavFreeEnergyProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SOLVATION/reissCavFreeEnergyProcessor.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/ENERGY/energyProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SOLVATION/reissCavFreeEnergyProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SOLVATION/reissCavFreeEnergyProcessor.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/ENERGY/energyProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SOLVATION/reissCavFreeEnergyProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SOLVATION/reissCavFreeEnergyProcessor.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 71%] Building CXX object CMakeFiles/BALL.dir/source/SOLVATION/solventDescriptor.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/SOLVATION/solventDescriptor.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SOLVATION/solventDescriptor.C
[ 71%] Building CXX object CMakeFiles/BALL.dir/source/SOLVATION/solventParameter.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/SOLVATION/solventParameter.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SOLVATION/solventParameter.C
[ 71%] Building CXX object CMakeFiles/BALL.dir/source/SOLVATION/uhligCavFreeEnergyProcessor.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/SOLVATION/uhligCavFreeEnergyProcessor.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SOLVATION/uhligCavFreeEnergyProcessor.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/ENERGY/energyProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SOLVATION/uhligCavFreeEnergyProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SOLVATION/uhligCavFreeEnergyProcessor.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/ENERGY/energyProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SOLVATION/uhligCavFreeEnergyProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SOLVATION/uhligCavFreeEnergyProcessor.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/ENERGY/energyProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SOLVATION/uhligCavFreeEnergyProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SOLVATION/uhligCavFreeEnergyProcessor.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/ENERGY/energyProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SOLVATION/uhligCavFreeEnergyProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SOLVATION/uhligCavFreeEnergyProcessor.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/ENERGY/energyProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SOLVATION/uhligCavFreeEnergyProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SOLVATION/uhligCavFreeEnergyProcessor.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/ENERGY/energyProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SOLVATION/uhligCavFreeEnergyProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SOLVATION/uhligCavFreeEnergyProcessor.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 71%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/BONDORDERS/AStarBondOrderStrategy.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/STRUCTURE/BONDORDERS/AStarBondOrderStrategy.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/BONDORDERS/AStarBondOrderStrategy.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/BONDORDERS/partialBondOrderAssignment.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/BONDORDERS/bondOrderAssignment.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/BONDORDERS/bondOrderAssignmentStrategy.h:5,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/BONDORDERS/AStarBondOrderStrategy.h:5,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/BONDORDERS/AStarBondOrderStrategy.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/BONDORDERS/partialBondOrderAssignment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/BONDORDERS/bondOrderAssignment.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/BONDORDERS/bondOrderAssignmentStrategy.h:5,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/BONDORDERS/AStarBondOrderStrategy.h:5,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/BONDORDERS/AStarBondOrderStrategy.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/BONDORDERS/partialBondOrderAssignment.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/BONDORDERS/bondOrderAssignment.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/BONDORDERS/bondOrderAssignmentStrategy.h:5,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/BONDORDERS/AStarBondOrderStrategy.h:5,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/BONDORDERS/AStarBondOrderStrategy.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/BONDORDERS/partialBondOrderAssignment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/BONDORDERS/bondOrderAssignment.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/BONDORDERS/bondOrderAssignmentStrategy.h:5,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/BONDORDERS/AStarBondOrderStrategy.h:5,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/BONDORDERS/AStarBondOrderStrategy.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/BONDORDERS/partialBondOrderAssignment.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/BONDORDERS/bondOrderAssignment.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/BONDORDERS/bondOrderAssignmentStrategy.h:5,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/BONDORDERS/AStarBondOrderStrategy.h:5,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/BONDORDERS/AStarBondOrderStrategy.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/BONDORDERS/partialBondOrderAssignment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/BONDORDERS/bondOrderAssignment.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/BONDORDERS/bondOrderAssignmentStrategy.h:5,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/BONDORDERS/AStarBondOrderStrategy.h:5,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/BONDORDERS/AStarBondOrderStrategy.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 71%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/BONDORDERS/bondOrderAssignment.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/STRUCTURE/BONDORDERS/bondOrderAssignment.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/BONDORDERS/bondOrderAssignment.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/BONDORDERS/partialBondOrderAssignment.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/BONDORDERS/bondOrderAssignment.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/BONDORDERS/bondOrderAssignment.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/BONDORDERS/partialBondOrderAssignment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/BONDORDERS/bondOrderAssignment.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/BONDORDERS/bondOrderAssignment.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/BONDORDERS/partialBondOrderAssignment.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/BONDORDERS/bondOrderAssignment.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/BONDORDERS/bondOrderAssignment.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/BONDORDERS/partialBondOrderAssignment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/BONDORDERS/bondOrderAssignment.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/BONDORDERS/bondOrderAssignment.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/BONDORDERS/partialBondOrderAssignment.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/BONDORDERS/bondOrderAssignment.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/BONDORDERS/bondOrderAssignment.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/BONDORDERS/partialBondOrderAssignment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/BONDORDERS/bondOrderAssignment.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/BONDORDERS/bondOrderAssignment.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/BONDORDERS/bondOrderAssignment.C:3:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/BONDORDERS/bondOrderAssignment.C: In member function 'bool BALL::BondOrderAssignment::apply()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:108:49: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  108 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/BONDORDERS/bondOrderAssignment.C:64:4: note: in expansion of macro 'BALL_FOREACH_BOND'
   64 |    BALL_FOREACH_BOND(*ac, a_it, b_it)
      |    ^~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/BONDORDERS/partialBondOrderAssignment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/BONDORDERS/bondOrderAssignment.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/BONDORDERS/bondOrderAssignment.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/BONDORDERS/bondOrderAssignment.C:3:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/BONDORDERS/bondOrderAssignment.C: In member function 'bool BALL::BondOrderAssignment::apply()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:108:49: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' first required here
  108 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/BONDORDERS/bondOrderAssignment.C:64:4: note: in expansion of macro 'BALL_FOREACH_BOND'
   64 |    BALL_FOREACH_BOND(*ac, a_it, b_it)
      |    ^~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:110:51: warning: implicitly-declared 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  110 |   for (bond_iterator = (*atom_iterator).beginBond(); \
      |                                                   ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/BONDORDERS/bondOrderAssignment.C:64:4: note: in expansion of macro 'BALL_FOREACH_BOND'
   64 |    BALL_FOREACH_BOND(*ac, a_it, b_it)
      |    ^~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/BONDORDERS/partialBondOrderAssignment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/BONDORDERS/bondOrderAssignment.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/BONDORDERS/bondOrderAssignment.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:437:15: note: because 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::RandomAccessIterator<Container, DataType, Position, Traits>::RandomAccessIterator(const BALL::RandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
  437 |   BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:413:8: warning: implicitly-declared 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  413 |  class RandomAccessIterator
      |        ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:47:15: note: because 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   47 |   BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:24:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   24 |  class ConstRandomAccessIterator
      |        ^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/BONDORDERS/partialBondOrderAssignment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/BONDORDERS/bondOrderAssignment.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/BONDORDERS/bondOrderAssignment.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/BONDORDERS/partialBondOrderAssignment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/BONDORDERS/bondOrderAssignment.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/BONDORDERS/bondOrderAssignment.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:413:8: note: synthesized method 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' first required here
  413 |  class RandomAccessIterator
      |        ^~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/BONDORDERS/bondOrderAssignment.C:3:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/BONDORDERS/bondOrderAssignment.C: In member function 'bool BALL::BondOrderAssignment::apply()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:110:51: note: synthesized method 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' first required here
  110 |   for (bond_iterator = (*atom_iterator).beginBond(); \
      |                                                   ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/BONDORDERS/bondOrderAssignment.C:64:4: note: in expansion of macro 'BALL_FOREACH_BOND'
   64 |    BALL_FOREACH_BOND(*ac, a_it, b_it)
      |    ^~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/BONDORDERS/bondOrderAssignment.C:87:25: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   87 |    a_it = ac->beginAtom();
      |                         ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/BONDORDERS/partialBondOrderAssignment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/BONDORDERS/bondOrderAssignment.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/BONDORDERS/bondOrderAssignment.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/BONDORDERS/bondOrderAssignment.C:88:27: warning: implicitly-declared 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   88 |    b_it = a_it->beginBond();
      |                           ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/BONDORDERS/partialBondOrderAssignment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/BONDORDERS/bondOrderAssignment.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/BONDORDERS/bondOrderAssignment.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:437:15: note: because 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::RandomAccessIterator<Container, DataType, Position, Traits>::RandomAccessIterator(const BALL::RandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
  437 |   BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/BONDORDERS/bondOrderAssignment.C:3:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:64:49: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   64 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/BONDORDERS/bondOrderAssignment.C:89:4: note: in expansion of macro 'BALL_FOREACH_ATOM'
   89 |    BALL_FOREACH_ATOM(*ac, a_it)
      |    ^~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/BONDORDERS/partialBondOrderAssignment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/BONDORDERS/bondOrderAssignment.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/BONDORDERS/bondOrderAssignment.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 71%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/BONDORDERS/bondOrderAssignmentStrategy.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/STRUCTURE/BONDORDERS/bondOrderAssignmentStrategy.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/BONDORDERS/bondOrderAssignmentStrategy.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/BONDORDERS/partialBondOrderAssignment.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/BONDORDERS/bondOrderAssignment.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/BONDORDERS/bondOrderAssignmentStrategy.h:5,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/BONDORDERS/bondOrderAssignmentStrategy.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/BONDORDERS/partialBondOrderAssignment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/BONDORDERS/bondOrderAssignment.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/BONDORDERS/bondOrderAssignmentStrategy.h:5,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/BONDORDERS/bondOrderAssignmentStrategy.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/BONDORDERS/partialBondOrderAssignment.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/BONDORDERS/bondOrderAssignment.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/BONDORDERS/bondOrderAssignmentStrategy.h:5,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/BONDORDERS/bondOrderAssignmentStrategy.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/BONDORDERS/partialBondOrderAssignment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/BONDORDERS/bondOrderAssignment.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/BONDORDERS/bondOrderAssignmentStrategy.h:5,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/BONDORDERS/bondOrderAssignmentStrategy.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/BONDORDERS/partialBondOrderAssignment.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/BONDORDERS/bondOrderAssignment.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/BONDORDERS/bondOrderAssignmentStrategy.h:5,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/BONDORDERS/bondOrderAssignmentStrategy.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/BONDORDERS/partialBondOrderAssignment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/BONDORDERS/bondOrderAssignment.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/BONDORDERS/bondOrderAssignmentStrategy.h:5,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/BONDORDERS/bondOrderAssignmentStrategy.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 71%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/BONDORDERS/branchAndBoundBondOrderStrategy.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/STRUCTURE/BONDORDERS/branchAndBoundBondOrderStrategy.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/BONDORDERS/branchAndBoundBondOrderStrategy.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/BONDORDERS/partialBondOrderAssignment.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/BONDORDERS/bondOrderAssignment.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/BONDORDERS/bondOrderAssignmentStrategy.h:5,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/BONDORDERS/branchAndBoundBondOrderStrategy.h:5,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/BONDORDERS/branchAndBoundBondOrderStrategy.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/BONDORDERS/partialBondOrderAssignment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/BONDORDERS/bondOrderAssignment.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/BONDORDERS/bondOrderAssignmentStrategy.h:5,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/BONDORDERS/branchAndBoundBondOrderStrategy.h:5,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/BONDORDERS/branchAndBoundBondOrderStrategy.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/BONDORDERS/partialBondOrderAssignment.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/BONDORDERS/bondOrderAssignment.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/BONDORDERS/bondOrderAssignmentStrategy.h:5,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/BONDORDERS/branchAndBoundBondOrderStrategy.h:5,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/BONDORDERS/branchAndBoundBondOrderStrategy.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/BONDORDERS/partialBondOrderAssignment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/BONDORDERS/bondOrderAssignment.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/BONDORDERS/bondOrderAssignmentStrategy.h:5,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/BONDORDERS/branchAndBoundBondOrderStrategy.h:5,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/BONDORDERS/branchAndBoundBondOrderStrategy.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/BONDORDERS/partialBondOrderAssignment.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/BONDORDERS/bondOrderAssignment.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/BONDORDERS/bondOrderAssignmentStrategy.h:5,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/BONDORDERS/branchAndBoundBondOrderStrategy.h:5,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/BONDORDERS/branchAndBoundBondOrderStrategy.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/BONDORDERS/partialBondOrderAssignment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/BONDORDERS/bondOrderAssignment.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/BONDORDERS/bondOrderAssignmentStrategy.h:5,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/BONDORDERS/branchAndBoundBondOrderStrategy.h:5,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/BONDORDERS/branchAndBoundBondOrderStrategy.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 71%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/BONDORDERS/FPTBondOrderStrategy.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/STRUCTURE/BONDORDERS/FPTBondOrderStrategy.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/BONDORDERS/FPTBondOrderStrategy.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/BONDORDERS/FPTBondOrderStrategy.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/BONDORDERS/FPTBondOrderStrategy.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/BONDORDERS/FPTBondOrderStrategy.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/BONDORDERS/FPTBondOrderStrategy.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/BONDORDERS/FPTBondOrderStrategy.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/BONDORDERS/FPTBondOrderStrategy.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/BONDORDERS/FPTBondOrderStrategy.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/BONDORDERS/FPTBondOrderStrategy.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/BONDORDERS/FPTBondOrderStrategy.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/BONDORDERS/FPTBondOrderStrategy.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/BONDORDERS/FPTBondOrderStrategy.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/BONDORDERS/FPTBondOrderStrategy.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/BONDORDERS/FPTBondOrderStrategy.C: In member function 'virtual bool BALL::FPTBondOrderStrategy::readOptions(const BALL::Options&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/BONDORDERS/FPTBondOrderStrategy.C:30:56: warning: unused parameter 'options' [-Wunused-parameter]
   30 |  bool FPTBondOrderStrategy::readOptions(const Options& options)
      |                                         ~~~~~~~~~~~~~~~^~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/BONDORDERS/FPTBondOrderStrategy.C: In member function 'virtual void BALL::FPTBondOrderStrategy::init()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/BONDORDERS/FPTBondOrderStrategy.C:69:13: warning: unused variable 'result' [-Wunused-variable]
   69 |     Penalty result = bond_assignments[i]->compute();
      |             ^~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/BONDORDERS/FPTBondOrderStrategy.C:3:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/BONDORDERS/FPTBondOrderStrategy.C: In member function 'virtual boost::shared_ptr<BALL::BondOrderAssignment> BALL::FPTBondOrderStrategy::computeNextSolution()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:108:49: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  108 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/BONDORDERS/FPTBondOrderStrategy.C:104:4: note: in expansion of macro 'BALL_FOREACH_BOND'
  104 |    BALL_FOREACH_BOND(*abop->getAtomContainer(), at_it, bond_it)
      |    ^~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/BONDORDERS/FPTBondOrderStrategy.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/BONDORDERS/FPTBondOrderStrategy.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/BONDORDERS/FPTBondOrderStrategy.C:3:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/BONDORDERS/FPTBondOrderStrategy.C: In member function 'virtual boost::shared_ptr<BALL::BondOrderAssignment> BALL::FPTBondOrderStrategy::computeNextSolution()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:108:49: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' first required here
  108 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/BONDORDERS/FPTBondOrderStrategy.C:104:4: note: in expansion of macro 'BALL_FOREACH_BOND'
  104 |    BALL_FOREACH_BOND(*abop->getAtomContainer(), at_it, bond_it)
      |    ^~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:110:51: warning: implicitly-declared 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  110 |   for (bond_iterator = (*atom_iterator).beginBond(); \
      |                                                   ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/BONDORDERS/FPTBondOrderStrategy.C:104:4: note: in expansion of macro 'BALL_FOREACH_BOND'
  104 |    BALL_FOREACH_BOND(*abop->getAtomContainer(), at_it, bond_it)
      |    ^~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/BONDORDERS/FPTBondOrderStrategy.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/BONDORDERS/FPTBondOrderStrategy.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:437:15: note: because 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::RandomAccessIterator<Container, DataType, Position, Traits>::RandomAccessIterator(const BALL::RandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
  437 |   BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:413:8: warning: implicitly-declared 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  413 |  class RandomAccessIterator
      |        ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:47:15: note: because 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   47 |   BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:24:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   24 |  class ConstRandomAccessIterator
      |        ^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/BONDORDERS/FPTBondOrderStrategy.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/BONDORDERS/FPTBondOrderStrategy.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/BONDORDERS/FPTBondOrderStrategy.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/BONDORDERS/FPTBondOrderStrategy.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:413:8: note: synthesized method 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' first required here
  413 |  class RandomAccessIterator
      |        ^~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/BONDORDERS/FPTBondOrderStrategy.C:3:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/BONDORDERS/FPTBondOrderStrategy.C: In member function 'virtual boost::shared_ptr<BALL::BondOrderAssignment> BALL::FPTBondOrderStrategy::computeNextSolution()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:110:51: note: synthesized method 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' first required here
  110 |   for (bond_iterator = (*atom_iterator).beginBond(); \
      |                                                   ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/BONDORDERS/FPTBondOrderStrategy.C:104:4: note: in expansion of macro 'BALL_FOREACH_BOND'
  104 |    BALL_FOREACH_BOND(*abop->getAtomContainer(), at_it, bond_it)
      |    ^~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/BONDORDERS/FPTBondOrderStrategy.C: In member function 'void BALL::FPTBondOrderStrategy::FPTBondOrderAssignment_::computeJoinBag(BALL::FPTBondOrderStrategy::TreeDecompositionBag&, BALL::FPTBondOrderStrategy::DPTable_&, BALL::FPTBondOrderStrategy::DPTable_&, BALL::FPTBondOrderStrategy::AdditionalBagProperties_&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/BONDORDERS/FPTBondOrderStrategy.C:853:32: warning: implicitly-declared 'BALL::FPTBondOrderStrategy::DPConfig_::DPConfig_(const BALL::FPTBondOrderStrategy::DPConfig_&)' is deprecated [-Wdeprecated-copy]
  853 |     DPConfig_ config = *match->first;
      |                                ^~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/BONDORDERS/FPTBondOrderStrategy.C:245:35: note: because 'BALL::FPTBondOrderStrategy::DPConfig_' has user-provided 'BALL::FPTBondOrderStrategy::DPConfig_& BALL::FPTBondOrderStrategy::DPConfig_::operator=(const BALL::FPTBondOrderStrategy::DPConfig_&)'
  245 |  FPTBondOrderStrategy::DPConfig_& FPTBondOrderStrategy::DPConfig_::operator = (DPConfig_ const& copy)
      |                                   ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/BONDORDERS/FPTBondOrderStrategy.C: In copy constructor 'BALL::FPTBondOrderStrategy::BackTrackingState_::BackTrackingState_(const BALL::FPTBondOrderStrategy::BackTrackingState_&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/BONDORDERS/FPTBondOrderStrategy.C:1213:21: warning: implicitly-declared 'BALL::FPTBondOrderStrategy::DPConfig_::DPConfig_(const BALL::FPTBondOrderStrategy::DPConfig_&)' is deprecated [-Wdeprecated-copy]
 1213 |    index(other.index)
      |                     ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/BONDORDERS/FPTBondOrderStrategy.C:245:35: note: because 'BALL::FPTBondOrderStrategy::DPConfig_' has user-provided 'BALL::FPTBondOrderStrategy::DPConfig_& BALL::FPTBondOrderStrategy::DPConfig_::operator=(const BALL::FPTBondOrderStrategy::DPConfig_&)'
  245 |  FPTBondOrderStrategy::DPConfig_& FPTBondOrderStrategy::DPConfig_::operator = (DPConfig_ const& copy)
      |                                   ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/BONDORDERS/FPTBondOrderStrategy.C: In member function 'void BALL::FPTBondOrderStrategy::DPBackTracking_::visitIntroduce(BALL::FPTBondOrderStrategy::BackTrackingState_&, BALL::FPTBondOrderStrategy::DPBackTracking_::TreeDecompositionBag&, BALL::FPTBondOrderStrategy::DPTable_&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/BONDORDERS/FPTBondOrderStrategy.C:1525:41: warning: implicitly-declared 'BALL::FPTBondOrderStrategy::DPConfig_::DPConfig_(const BALL::FPTBondOrderStrategy::DPConfig_&)' is deprecated [-Wdeprecated-copy]
 1525 |   DPConfig_ antecessor = table.begin()->first;
      |                                         ^~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/BONDORDERS/FPTBondOrderStrategy.C:245:35: note: because 'BALL::FPTBondOrderStrategy::DPConfig_' has user-provided 'BALL::FPTBondOrderStrategy::DPConfig_& BALL::FPTBondOrderStrategy::DPConfig_::operator=(const BALL::FPTBondOrderStrategy::DPConfig_&)'
  245 |  FPTBondOrderStrategy::DPConfig_& FPTBondOrderStrategy::DPConfig_::operator = (DPConfig_ const& copy)
      |                                   ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/BONDORDERS/FPTBondOrderStrategy.C: In member function 'void BALL::FPTBondOrderStrategy::DPBackTracking_::visitForget(BALL::FPTBondOrderStrategy::BackTrackingState_&, BALL::FPTBondOrderStrategy::DPBackTracking_::TreeDecompositionBag&, BALL::FPTBondOrderStrategy::DPTable_&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/BONDORDERS/FPTBondOrderStrategy.C:1722:26: warning: implicitly-declared 'BALL::FPTBondOrderStrategy::DPConfig_::DPConfig_(const BALL::FPTBondOrderStrategy::DPConfig_&)' is deprecated [-Wdeprecated-copy]
 1722 |   DPConfig_ test_entry = successor;
      |                          ^~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/BONDORDERS/FPTBondOrderStrategy.C:245:35: note: because 'BALL::FPTBondOrderStrategy::DPConfig_' has user-provided 'BALL::FPTBondOrderStrategy::DPConfig_& BALL::FPTBondOrderStrategy::DPConfig_::operator=(const BALL::FPTBondOrderStrategy::DPConfig_&)'
  245 |  FPTBondOrderStrategy::DPConfig_& FPTBondOrderStrategy::DPConfig_::operator = (DPConfig_ const& copy)
      |                                   ^~~~~~~~~~~~~~~~~~~~
[ 71%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/BONDORDERS/KGreedyBondOrderStrategy.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/STRUCTURE/BONDORDERS/KGreedyBondOrderStrategy.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/BONDORDERS/KGreedyBondOrderStrategy.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/BONDORDERS/partialBondOrderAssignment.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/BONDORDERS/bondOrderAssignment.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/BONDORDERS/bondOrderAssignmentStrategy.h:5,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/BONDORDERS/KGreedyBondOrderStrategy.h:5,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/BONDORDERS/KGreedyBondOrderStrategy.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/BONDORDERS/partialBondOrderAssignment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/BONDORDERS/bondOrderAssignment.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/BONDORDERS/bondOrderAssignmentStrategy.h:5,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/BONDORDERS/KGreedyBondOrderStrategy.h:5,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/BONDORDERS/KGreedyBondOrderStrategy.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/BONDORDERS/partialBondOrderAssignment.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/BONDORDERS/bondOrderAssignment.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/BONDORDERS/bondOrderAssignmentStrategy.h:5,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/BONDORDERS/KGreedyBondOrderStrategy.h:5,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/BONDORDERS/KGreedyBondOrderStrategy.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/BONDORDERS/partialBondOrderAssignment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/BONDORDERS/bondOrderAssignment.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/BONDORDERS/bondOrderAssignmentStrategy.h:5,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/BONDORDERS/KGreedyBondOrderStrategy.h:5,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/BONDORDERS/KGreedyBondOrderStrategy.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/BONDORDERS/partialBondOrderAssignment.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/BONDORDERS/bondOrderAssignment.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/BONDORDERS/bondOrderAssignmentStrategy.h:5,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/BONDORDERS/KGreedyBondOrderStrategy.h:5,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/BONDORDERS/KGreedyBondOrderStrategy.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/BONDORDERS/partialBondOrderAssignment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/BONDORDERS/bondOrderAssignment.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/BONDORDERS/bondOrderAssignmentStrategy.h:5,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/BONDORDERS/KGreedyBondOrderStrategy.h:5,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/BONDORDERS/KGreedyBondOrderStrategy.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 71%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/BONDORDERS/partialBondOrderAssignment.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/STRUCTURE/BONDORDERS/partialBondOrderAssignment.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/BONDORDERS/partialBondOrderAssignment.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/BONDORDERS/partialBondOrderAssignment.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/BONDORDERS/partialBondOrderAssignment.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/BONDORDERS/partialBondOrderAssignment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/BONDORDERS/partialBondOrderAssignment.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/BONDORDERS/partialBondOrderAssignment.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/BONDORDERS/partialBondOrderAssignment.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/BONDORDERS/partialBondOrderAssignment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/BONDORDERS/partialBondOrderAssignment.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/BONDORDERS/partialBondOrderAssignment.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/BONDORDERS/partialBondOrderAssignment.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/BONDORDERS/partialBondOrderAssignment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/BONDORDERS/partialBondOrderAssignment.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/BONDORDERS/partialBondOrderAssignment.C: In member function 'bool BALL::PartialBondOrderAssignment::estimatePenalty_(bool, BALL::PartialBondOrderAssignment::HEURISTIC_INDEX)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/BONDORDERS/partialBondOrderAssignment.C:226:32: warning: implicitly-declared 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  226 |    for (b_it = a_it->beginBond(); +b_it; b_it++)
      |                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/BONDORDERS/partialBondOrderAssignment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/BONDORDERS/partialBondOrderAssignment.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:437:15: note: because 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::RandomAccessIterator<Container, DataType, Position, Traits>::RandomAccessIterator(const BALL::RandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
  437 |   BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:413:8: warning: implicitly-declared 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  413 |  class RandomAccessIterator
      |        ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:47:15: note: because 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   47 |   BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:24:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   24 |  class ConstRandomAccessIterator
      |        ^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/BONDORDERS/partialBondOrderAssignment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/BONDORDERS/partialBondOrderAssignment.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/BONDORDERS/partialBondOrderAssignment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/BONDORDERS/partialBondOrderAssignment.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:413:8: note: synthesized method 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' first required here
  413 |  class RandomAccessIterator
      |        ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/BONDORDERS/partialBondOrderAssignment.C: In member function 'bool BALL::PartialBondOrderAssignment::estimatePenalty_(bool, BALL::PartialBondOrderAssignment::HEURISTIC_INDEX)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/BONDORDERS/partialBondOrderAssignment.C:226:32: note: synthesized method 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' first required here
  226 |    for (b_it = a_it->beginBond(); +b_it; b_it++)
      |                                ^
[ 71%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/addHydrogenProcessor.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/STRUCTURE/addHydrogenProcessor.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/addHydrogenProcessor.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/addHydrogenProcessor.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/addHydrogenProcessor.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/addHydrogenProcessor.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/addHydrogenProcessor.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/addHydrogenProcessor.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/addHydrogenProcessor.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/addHydrogenProcessor.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/addHydrogenProcessor.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/addHydrogenProcessor.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/processor.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/addHydrogenProcessor.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/addHydrogenProcessor.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94ParametersBase::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:43:3: note: in expansion of macro 'BALL_CREATE'
   43 |   BALL_CREATE(MMFF94ParametersBase)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/addHydrogenProcessor.C:12:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/processor.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/addHydrogenProcessor.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/addHydrogenProcessor.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:3: note: in expansion of macro 'BALL_CREATE'
  217 |   BALL_CREATE(MMFF94StretchParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/addHydrogenProcessor.C:12:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:226:34: note: because 'BALL::MMFF94StretchParameters' has user-provided 'const BALL::MMFF94StretchParameters& BALL::MMFF94StretchParameters::operator=(const BALL::MMFF94StretchParameters&)'
  226 |   const MMFF94StretchParameters& operator = (const MMFF94StretchParameters& param)
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:185:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  185 |  class BALL_EXPORT MMFF94StretchParameters:
      |                    ^~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/processor.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/addHydrogenProcessor.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/addHydrogenProcessor.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:3: note: in expansion of macro 'BALL_CREATE'
  217 |   BALL_CREATE(MMFF94StretchParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94BendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:3: note: in expansion of macro 'BALL_CREATE'
  271 |   BALL_CREATE(MMFF94BendParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/addHydrogenProcessor.C:12:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:280:31: note: because 'BALL::MMFF94BendParameters' has user-provided 'const BALL::MMFF94BendParameters& BALL::MMFF94BendParameters::operator=(const BALL::MMFF94BendParameters&)'
  280 |   const MMFF94BendParameters& operator = (const MMFF94BendParameters& param)
      |                               ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:263:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  263 |  class BALL_EXPORT MMFF94BendParameters
      |                    ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/processor.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/addHydrogenProcessor.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/addHydrogenProcessor.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94BendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:3: note: in expansion of macro 'BALL_CREATE'
  271 |   BALL_CREATE(MMFF94BendParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:3: note: in expansion of macro 'BALL_CREATE'
  318 |   BALL_CREATE(MMFF94StretchBendParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/addHydrogenProcessor.C:12:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:327:38: note: because 'BALL::MMFF94StretchBendParameters' has user-provided 'const BALL::MMFF94StretchBendParameters& BALL::MMFF94StretchBendParameters::operator=(const BALL::MMFF94StretchBendParameters&)'
  327 |   const MMFF94StretchBendParameters& operator = (const MMFF94StretchBendParameters& param)
      |                                      ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:310:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  310 |  class BALL_EXPORT MMFF94StretchBendParameters
      |                    ^~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/processor.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/addHydrogenProcessor.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/addHydrogenProcessor.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:3: note: in expansion of macro 'BALL_CREATE'
  318 |   BALL_CREATE(MMFF94StretchBendParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:3: note: in expansion of macro 'BALL_CREATE'
  374 |   BALL_CREATE(MMFF94TorsionParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/addHydrogenProcessor.C:12:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:383:34: note: because 'BALL::MMFF94TorsionParameters' has user-provided 'const BALL::MMFF94TorsionParameters& BALL::MMFF94TorsionParameters::operator=(const BALL::MMFF94TorsionParameters&)'
  383 |   const MMFF94TorsionParameters& operator = (const MMFF94TorsionParameters& param)
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:366:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  366 |  class BALL_EXPORT MMFF94TorsionParameters
      |                    ^~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/processor.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/addHydrogenProcessor.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/addHydrogenProcessor.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:3: note: in expansion of macro 'BALL_CREATE'
  374 |   BALL_CREATE(MMFF94TorsionParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:3: note: in expansion of macro 'BALL_CREATE'
  422 |   BALL_CREATE(MMFF94PlaneParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/addHydrogenProcessor.C:12:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:431:32: note: because 'BALL::MMFF94PlaneParameters' has user-provided 'const BALL::MMFF94PlaneParameters& BALL::MMFF94PlaneParameters::operator=(const BALL::MMFF94PlaneParameters&)'
  431 |   const MMFF94PlaneParameters& operator = (const MMFF94PlaneParameters& param)
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:414:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  414 |  class BALL_EXPORT MMFF94PlaneParameters
      |                    ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/processor.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/addHydrogenProcessor.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/addHydrogenProcessor.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:3: note: in expansion of macro 'BALL_CREATE'
  422 |   BALL_CREATE(MMFF94PlaneParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:3: note: in expansion of macro 'BALL_CREATE'
  473 |   BALL_CREATE(MMFF94VDWParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/addHydrogenProcessor.C:12:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:482:30: note: because 'BALL::MMFF94VDWParameters' has user-provided 'const BALL::MMFF94VDWParameters& BALL::MMFF94VDWParameters::operator=(const BALL::MMFF94VDWParameters&)'
  482 |   const MMFF94VDWParameters& operator = (const MMFF94VDWParameters& param)
      |                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:458:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  458 |  class BALL_EXPORT MMFF94VDWParameters
      |                    ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/processor.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/addHydrogenProcessor.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/addHydrogenProcessor.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:3: note: in expansion of macro 'BALL_CREATE'
  473 |   BALL_CREATE(MMFF94VDWParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94ESParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:3: note: in expansion of macro 'BALL_CREATE'
  530 |   BALL_CREATE(MMFF94ESParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/addHydrogenProcessor.C:12:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:539:29: note: because 'BALL::MMFF94ESParameters' has user-provided 'const BALL::MMFF94ESParameters& BALL::MMFF94ESParameters::operator=(const BALL::MMFF94ESParameters&)'
  539 |   const MMFF94ESParameters& operator = (const MMFF94ESParameters& param)
      |                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:525:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  525 |  class BALL_EXPORT MMFF94ESParameters
      |                    ^~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/processor.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/addHydrogenProcessor.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/addHydrogenProcessor.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94ESParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:3: note: in expansion of macro 'BALL_CREATE'
  530 |   BALL_CREATE(MMFF94ESParameters)
      |   ^~~~~~~~~~~
[ 71%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/analyticalSES.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/STRUCTURE/analyticalSES.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/analyticalSES.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/analyticalSES.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/analyticalSES.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/analyticalSES.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/analyticalSES.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/analyticalSES.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/analyticalSES.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 71%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/assignBondOrderProcessor.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/STRUCTURE/assignBondOrderProcessor.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/assignBondOrderProcessor.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/kernel.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/assignBondOrderProcessor.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/kernel.h:12,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/assignBondOrderProcessor.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/kernel.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/assignBondOrderProcessor.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/kernel.h:12,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/assignBondOrderProcessor.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/kernel.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/assignBondOrderProcessor.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/kernel.h:12,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/assignBondOrderProcessor.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/assignBondOrderProcessor.C: In member function 'virtual BALL::Processor::Result BALL::AssignBondOrderProcessor::operator()(BALL::AtomContainer&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/assignBondOrderProcessor.C:594:51: warning: comparison of integer expressions of different signedness: 'BALL::Size' {aka 'unsigned int'} and 'int' [-Wsign-compare]
  594 |               && ((getNumberOfComputedSolutions() < max_number_of_solutions_) || (!max_number_of_solutions_))
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/assignBondOrderProcessor.C: In member function 'bool BALL::AssignBondOrderProcessor::readAtomPenalties_()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/assignBondOrderProcessor.C:667:29: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int' [-Wsign-compare]
  667 |   for (unsigned int i= 0; i < entries.length(); i++)
      |                           ~~^~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/assignBondOrderProcessor.C:705:33: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int' [-Wsign-compare]
  705 |      for (unsigned int k = 0; k < penalties.length(); k++)
      |                               ~~^~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/kernel.h:28,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/assignBondOrderProcessor.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/assignBondOrderProcessor.C: In member function 'bool BALL::AssignBondOrderProcessor::precomputeBondLengthPenalties_()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:108:49: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  108 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/assignBondOrderProcessor.C:774:4: note: in expansion of macro 'BALL_FOREACH_BOND'
  774 |    BALL_FOREACH_BOND(*ac_, a_it, b_it)
      |    ^~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/kernel.h:12,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/assignBondOrderProcessor.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/kernel.h:28,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/assignBondOrderProcessor.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/assignBondOrderProcessor.C: In member function 'bool BALL::AssignBondOrderProcessor::precomputeBondLengthPenalties_()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:108:49: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' first required here
  108 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/assignBondOrderProcessor.C:774:4: note: in expansion of macro 'BALL_FOREACH_BOND'
  774 |    BALL_FOREACH_BOND(*ac_, a_it, b_it)
      |    ^~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:110:51: warning: implicitly-declared 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  110 |   for (bond_iterator = (*atom_iterator).beginBond(); \
      |                                                   ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/assignBondOrderProcessor.C:774:4: note: in expansion of macro 'BALL_FOREACH_BOND'
  774 |    BALL_FOREACH_BOND(*ac_, a_it, b_it)
      |    ^~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/kernel.h:12,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/assignBondOrderProcessor.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:437:15: note: because 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::RandomAccessIterator<Container, DataType, Position, Traits>::RandomAccessIterator(const BALL::RandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
  437 |   BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:413:8: warning: implicitly-declared 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  413 |  class RandomAccessIterator
      |        ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:47:15: note: because 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   47 |   BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:24:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   24 |  class ConstRandomAccessIterator
      |        ^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/kernel.h:12,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/assignBondOrderProcessor.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/kernel.h:12,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/assignBondOrderProcessor.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:413:8: note: synthesized method 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' first required here
  413 |  class RandomAccessIterator
      |        ^~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/kernel.h:28,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/assignBondOrderProcessor.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/assignBondOrderProcessor.C: In member function 'bool BALL::AssignBondOrderProcessor::precomputeBondLengthPenalties_()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:110:51: note: synthesized method 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' first required here
  110 |   for (bond_iterator = (*atom_iterator).beginBond(); \
      |                                                   ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/assignBondOrderProcessor.C:774:4: note: in expansion of macro 'BALL_FOREACH_BOND'
  774 |    BALL_FOREACH_BOND(*ac_, a_it, b_it)
      |    ^~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/assignBondOrderProcessor.C:799:10: warning: variable 'min_order' set but not used [-Wunused-but-set-variable]
  799 |     Size min_order = 0;
      |          ^~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/kernel.h:28,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/assignBondOrderProcessor.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/assignBondOrderProcessor.C: In member function 'void BALL::AssignBondOrderProcessor::storeOriginalConfiguration_()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:108:49: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  108 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/assignBondOrderProcessor.C:1187:3: note: in expansion of macro 'BALL_FOREACH_BOND'
 1187 |   BALL_FOREACH_BOND(*ac_, a_it, b_it)
      |   ^~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/kernel.h:12,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/assignBondOrderProcessor.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/kernel.h:28,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/assignBondOrderProcessor.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:110:51: warning: implicitly-declared 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  110 |   for (bond_iterator = (*atom_iterator).beginBond(); \
      |                                                   ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/assignBondOrderProcessor.C:1187:3: note: in expansion of macro 'BALL_FOREACH_BOND'
 1187 |   BALL_FOREACH_BOND(*ac_, a_it, b_it)
      |   ^~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/kernel.h:12,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/assignBondOrderProcessor.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:437:15: note: because 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::RandomAccessIterator<Container, DataType, Position, Traits>::RandomAccessIterator(const BALL::RandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
  437 |   BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/kernel.h:28,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/assignBondOrderProcessor.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/assignBondOrderProcessor.C: In member function 'float BALL::AssignBondOrderProcessor::evaluatePenalty(BALL::AtomContainer*)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:108:49: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  108 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/assignBondOrderProcessor.C:1449:5: note: in expansion of macro 'BALL_FOREACH_BOND'
 1449 |     BALL_FOREACH_BOND(*ac, a_it, b_it)
      |     ^~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/kernel.h:12,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/assignBondOrderProcessor.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/kernel.h:28,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/assignBondOrderProcessor.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:110:51: warning: implicitly-declared 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  110 |   for (bond_iterator = (*atom_iterator).beginBond(); \
      |                                                   ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/assignBondOrderProcessor.C:1449:5: note: in expansion of macro 'BALL_FOREACH_BOND'
 1449 |     BALL_FOREACH_BOND(*ac, a_it, b_it)
      |     ^~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/kernel.h:12,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/assignBondOrderProcessor.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:437:15: note: because 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::RandomAccessIterator<Container, DataType, Position, Traits>::RandomAccessIterator(const BALL::RandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
  437 |   BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~
[ 71%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/atomBijection.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/STRUCTURE/atomBijection.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/atomBijection.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/atomBijection.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/atomBijection.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/atomBijection.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/atomBijection.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/atomBijection.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/atomBijection.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/atomBijection.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/atomBijection.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/atomBijection.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/atomBijection.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/atomBijection.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/atomBijection.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 71%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/atomTyper.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/STRUCTURE/atomTyper.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/atomTyper.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/atomTyper.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/atomTyper.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/atomTyper.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/atomTyper.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/atomTyper.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/atomTyper.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 71%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/binaryFingerprintMethods.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/STRUCTURE/binaryFingerprintMethods.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/binaryFingerprintMethods.C
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/binaryFingerprintMethods.C: In static member function 'static bool BALL::BinaryFingerprintMethods::parseBinaryFingerprint(const BALL::String&, std::vector<short unsigned int>&, unsigned int, const char*)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/binaryFingerprintMethods.C:293:36: warning: catching polymorphic type 'class BALL::Exception::InvalidFormat' by value [-Wcatch-value=]
  293 |    catch (Exception::InvalidFormat e)
      |                                    ^
[ 71%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/bindingPocketProcessor.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/STRUCTURE/bindingPocketProcessor.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/bindingPocketProcessor.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/bindingPocketProcessor.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/bindingPocketProcessor.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/bindingPocketProcessor.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/bindingPocketProcessor.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/bindingPocketProcessor.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/bindingPocketProcessor.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/bindingPocketProcessor.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/bindingPocketProcessor.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/bindingPocketProcessor.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/bindingPocketProcessor.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/bindingPocketProcessor.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/bindingPocketProcessor.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/bindingPocketProcessor.C: In member function 'virtual BALL::Processor::Result BALL::BindingPocketProcessor::operator()(BALL::Composite&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/bindingPocketProcessor.C:239:22: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  239 |    ai = s->beginAtom();
      |                      ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/bindingPocketProcessor.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/bindingPocketProcessor.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/bindingPocketProcessor.C: In member function 'virtual BALL::Processor::Result BALL::BindingPocketProcessor::operator()(BALL::Composite&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/bindingPocketProcessor.C:239:22: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' first required here
  239 |    ai = s->beginAtom();
      |                      ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/bindingPocketProcessor.C:245:22: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  245 |    ai = s->beginAtom();
      |                      ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/bindingPocketProcessor.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/bindingPocketProcessor.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/bindingPocketProcessor.C:251:22: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  251 |    ai = s->beginAtom();
      |                      ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/bindingPocketProcessor.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/bindingPocketProcessor.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/bindingPocketProcessor.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/bindingPocketProcessor.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h: In instantiation of 'BALL::Index BALL::HashGrid3<Item>::getIndex_(const BALL::HashGridBox3<Item>&) const [with Item = BALL::BindingPocketProcessor::Sphere_; BALL::Index = int]':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:1516:17:   required from 'bool BALL::HashGrid3<Item>::getIndices(const BALL::HashGridBox3<Item>&, BALL::Position&, BALL::Position&, BALL::Position&) const [with Item = BALL::BindingPocketProcessor::Sphere_; BALL::Position = unsigned int]'
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/bindingPocketProcessor.C:398:50:   required from here
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:1726:46: warning: comparison of integer expressions of different signedness: 'int' and 'BALL::Size' {aka 'unsigned int'} [-Wsign-compare]
 1726 |   if ((&box < &box_[0]) || (&box - &box_[0]  >= getSize()))
      |                            ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~
[ 71%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/buildBondsProcessor.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/STRUCTURE/buildBondsProcessor.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/buildBondsProcessor.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/buildBondsProcessor.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/buildBondsProcessor.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/buildBondsProcessor.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/buildBondsProcessor.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/buildBondsProcessor.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/buildBondsProcessor.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/buildBondsProcessor.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/buildBondsProcessor.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/buildBondsProcessor.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/buildBondsProcessor.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/buildBondsProcessor.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/buildBondsProcessor.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/buildBondsProcessor.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/buildBondsProcessor.C: In member function 'virtual BALL::Processor::Result BALL::BuildBondsProcessor::operator()(BALL::AtomContainer&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:64:49: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   64 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/buildBondsProcessor.C:90:4: note: in expansion of macro 'BALL_FOREACH_ATOM'
   90 |    BALL_FOREACH_ATOM(ac, ait)
      |    ^~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/buildBondsProcessor.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/buildBondsProcessor.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/buildBondsProcessor.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/buildBondsProcessor.C: In member function 'virtual BALL::Processor::Result BALL::BuildBondsProcessor::operator()(BALL::AtomContainer&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:64:49: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' first required here
   64 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/buildBondsProcessor.C:90:4: note: in expansion of macro 'BALL_FOREACH_ATOM'
   90 |    BALL_FOREACH_ATOM(ac, ait)
      |    ^~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/buildBondsProcessor.C: In member function 'BALL::Size BALL::BuildBondsProcessor::buildBondsHashGrid3_(BALL::AtomContainer&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:90:55: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   90 | for (first_atom_iterator = (atom_container).beginAtom(); \
      |                                                       ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/buildBondsProcessor.C:129:4: note: in expansion of macro 'BALL_FOREACH_ATOM_PAIR'
  129 |    BALL_FOREACH_ATOM_PAIR(ac, ait1, ait2)
      |    ^~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/buildBondsProcessor.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/buildBondsProcessor.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/buildBondsProcessor.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:92:58: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   92 |   for (second_atom_iterator = (atom_container).beginAtom(); \
      |                                                          ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/buildBondsProcessor.C:129:4: note: in expansion of macro 'BALL_FOREACH_ATOM_PAIR'
  129 |    BALL_FOREACH_ATOM_PAIR(ac, ait1, ait2)
      |    ^~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/buildBondsProcessor.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/buildBondsProcessor.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/buildBondsProcessor.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/buildBondsProcessor.C: In member function 'void BALL::BuildBondsProcessor::estimateBondOrders_(BALL::AtomContainer&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:108:49: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  108 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/buildBondsProcessor.C:258:3: note: in expansion of macro 'BALL_FOREACH_BOND'
  258 |   BALL_FOREACH_BOND(ac, ait, bit)
      |   ^~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/buildBondsProcessor.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/buildBondsProcessor.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/buildBondsProcessor.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:110:51: warning: implicitly-declared 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  110 |   for (bond_iterator = (*atom_iterator).beginBond(); \
      |                                                   ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/buildBondsProcessor.C:258:3: note: in expansion of macro 'BALL_FOREACH_BOND'
  258 |   BALL_FOREACH_BOND(ac, ait, bit)
      |   ^~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/buildBondsProcessor.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/buildBondsProcessor.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:437:15: note: because 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::RandomAccessIterator<Container, DataType, Position, Traits>::RandomAccessIterator(const BALL::RandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
  437 |   BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:413:8: warning: implicitly-declared 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  413 |  class RandomAccessIterator
      |        ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:47:15: note: because 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   47 |   BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:24:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   24 |  class ConstRandomAccessIterator
      |        ^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/buildBondsProcessor.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/buildBondsProcessor.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/buildBondsProcessor.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/buildBondsProcessor.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:413:8: note: synthesized method 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' first required here
  413 |  class RandomAccessIterator
      |        ^~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/buildBondsProcessor.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/buildBondsProcessor.C: In member function 'void BALL::BuildBondsProcessor::estimateBondOrders_(BALL::AtomContainer&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:110:51: note: synthesized method 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' first required here
  110 |   for (bond_iterator = (*atom_iterator).beginBond(); \
      |                                                   ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/buildBondsProcessor.C:258:3: note: in expansion of macro 'BALL_FOREACH_BOND'
  258 |   BALL_FOREACH_BOND(ac, ait, bit)
      |   ^~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/buildBondsProcessor.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/buildBondsProcessor.C: In member function 'void BALL::BuildBondsProcessor::deleteOverestimatedBonds_(BALL::AtomContainer&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:64:49: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   64 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/buildBondsProcessor.C:333:3: note: in expansion of macro 'BALL_FOREACH_ATOM'
  333 |   BALL_FOREACH_ATOM(ac, ait)
      |   ^~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/buildBondsProcessor.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/buildBondsProcessor.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/buildBondsProcessor.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h: In instantiation of 'BALL::Index BALL::HashGrid3<Item>::getIndex_(const BALL::HashGridBox3<Item>&) const [with Item = BALL::Atom*; BALL::Index = int]':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:1516:17:   required from 'bool BALL::HashGrid3<Item>::getIndices(const BALL::HashGridBox3<Item>&, BALL::Position&, BALL::Position&, BALL::Position&) const [with Item = BALL::Atom*; BALL::Position = unsigned int]'
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/buildBondsProcessor.C:165:36:   required from here
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:1726:46: warning: comparison of integer expressions of different signedness: 'int' and 'BALL::Size' {aka 'unsigned int'} [-Wsign-compare]
 1726 |   if ((&box < &box_[0]) || (&box - &box_[0]  >= getSize()))
      |                            ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~
[ 71%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/connectedComponentsProcessor.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/STRUCTURE/connectedComponentsProcessor.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/connectedComponentsProcessor.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/molecule.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/connectedComponentsProcessor.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/connectedComponentsProcessor.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/molecule.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/connectedComponentsProcessor.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/connectedComponentsProcessor.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/molecule.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/connectedComponentsProcessor.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/connectedComponentsProcessor.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/molecule.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/connectedComponentsProcessor.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/connectedComponentsProcessor.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/molecule.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/connectedComponentsProcessor.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/connectedComponentsProcessor.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/molecule.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/connectedComponentsProcessor.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/connectedComponentsProcessor.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/connectedComponentsProcessor.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/connectedComponentsProcessor.C: In member function 'virtual BALL::Processor::Result BALL::ConnectedComponentsProcessor::operator()(BALL::AtomContainer&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:64:49: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   64 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/connectedComponentsProcessor.C:50:3: note: in expansion of macro 'BALL_FOREACH_ATOM'
   50 |   BALL_FOREACH_ATOM(ac, atom_it)
      |   ^~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/molecule.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/connectedComponentsProcessor.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/connectedComponentsProcessor.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/connectedComponentsProcessor.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/connectedComponentsProcessor.C: In member function 'virtual BALL::Processor::Result BALL::ConnectedComponentsProcessor::operator()(BALL::AtomContainer&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:64:49: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' first required here
   64 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/connectedComponentsProcessor.C:50:3: note: in expansion of macro 'BALL_FOREACH_ATOM'
   50 |   BALL_FOREACH_ATOM(ac, atom_it)
      |   ^~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/connectedComponentsProcessor.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:141:49: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  141 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/connectedComponentsProcessor.C:66:3: note: in expansion of macro 'BALL_FOREACH_INTRABOND'
   66 |   BALL_FOREACH_INTRABOND(ac, atom_it, bond_iter)
      |   ^~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/molecule.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/connectedComponentsProcessor.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/connectedComponentsProcessor.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/connectedComponentsProcessor.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:143:51: warning: implicitly-declared 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  143 |   for (bond_iterator = (*atom_iterator).beginBond(); \
      |                                                   ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/connectedComponentsProcessor.C:66:3: note: in expansion of macro 'BALL_FOREACH_INTRABOND'
   66 |   BALL_FOREACH_INTRABOND(ac, atom_it, bond_iter)
      |   ^~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/molecule.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/connectedComponentsProcessor.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/connectedComponentsProcessor.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:437:15: note: because 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::RandomAccessIterator<Container, DataType, Position, Traits>::RandomAccessIterator(const BALL::RandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
  437 |   BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:413:8: warning: implicitly-declared 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  413 |  class RandomAccessIterator
      |        ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:47:15: note: because 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   47 |   BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:24:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   24 |  class ConstRandomAccessIterator
      |        ^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/molecule.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/connectedComponentsProcessor.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/connectedComponentsProcessor.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/molecule.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/connectedComponentsProcessor.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/connectedComponentsProcessor.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:413:8: note: synthesized method 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' first required here
  413 |  class RandomAccessIterator
      |        ^~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/connectedComponentsProcessor.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/connectedComponentsProcessor.C: In member function 'virtual BALL::Processor::Result BALL::ConnectedComponentsProcessor::operator()(BALL::AtomContainer&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:143:51: note: synthesized method 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' first required here
  143 |   for (bond_iterator = (*atom_iterator).beginBond(); \
      |                                                   ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/connectedComponentsProcessor.C:66:3: note: in expansion of macro 'BALL_FOREACH_INTRABOND'
   66 |   BALL_FOREACH_INTRABOND(ac, atom_it, bond_iter)
      |   ^~~~~~~~~~~~~~~~~~~~~~
[ 71%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/connolly.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/STRUCTURE/connolly.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/connolly.C
[ 71%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/defaultProcessors.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/STRUCTURE/defaultProcessors.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/defaultProcessors.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/defaultProcessors.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/defaultProcessors.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/defaultProcessors.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/defaultProcessors.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/defaultProcessors.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/defaultProcessors.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/defaultProcessors.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/defaultProcessors.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/defaultProcessors.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 76%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/disulfidBondProcessor.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/STRUCTURE/disulfidBondProcessor.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/disulfidBondProcessor.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/disulfidBondProcessor.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/disulfidBondProcessor.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/disulfidBondProcessor.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/disulfidBondProcessor.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/disulfidBondProcessor.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/disulfidBondProcessor.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/disulfidBondProcessor.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/disulfidBondProcessor.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/disulfidBondProcessor.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/disulfidBondProcessor.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/disulfidBondProcessor.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/disulfidBondProcessor.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/disulfidBondProcessor.C:15:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/disulfidBondProcessor.C: In member function 'virtual BALL::Processor::Result BALL::DisulfidBondProcessor::operator()(BALL::AtomContainer&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:108:49: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  108 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/disulfidBondProcessor.C:43:3: note: in expansion of macro 'BALL_FOREACH_BOND'
   43 |   BALL_FOREACH_BOND(ac, atom_it, bond_it)
      |   ^~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/disulfidBondProcessor.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/disulfidBondProcessor.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/disulfidBondProcessor.C:15:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/disulfidBondProcessor.C: In member function 'virtual BALL::Processor::Result BALL::DisulfidBondProcessor::operator()(BALL::AtomContainer&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:108:49: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' first required here
  108 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/disulfidBondProcessor.C:43:3: note: in expansion of macro 'BALL_FOREACH_BOND'
   43 |   BALL_FOREACH_BOND(ac, atom_it, bond_it)
      |   ^~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:110:51: warning: implicitly-declared 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  110 |   for (bond_iterator = (*atom_iterator).beginBond(); \
      |                                                   ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/disulfidBondProcessor.C:43:3: note: in expansion of macro 'BALL_FOREACH_BOND'
   43 |   BALL_FOREACH_BOND(ac, atom_it, bond_it)
      |   ^~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/disulfidBondProcessor.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/disulfidBondProcessor.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:437:15: note: because 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::RandomAccessIterator<Container, DataType, Position, Traits>::RandomAccessIterator(const BALL::RandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
  437 |   BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:413:8: warning: implicitly-declared 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  413 |  class RandomAccessIterator
      |        ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:47:15: note: because 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   47 |   BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:24:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   24 |  class ConstRandomAccessIterator
      |        ^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/disulfidBondProcessor.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/disulfidBondProcessor.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/disulfidBondProcessor.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/disulfidBondProcessor.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:413:8: note: synthesized method 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' first required here
  413 |  class RandomAccessIterator
      |        ^~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/disulfidBondProcessor.C:15:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/disulfidBondProcessor.C: In member function 'virtual BALL::Processor::Result BALL::DisulfidBondProcessor::operator()(BALL::AtomContainer&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:110:51: note: synthesized method 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' first required here
  110 |   for (bond_iterator = (*atom_iterator).beginBond(); \
      |                                                   ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/disulfidBondProcessor.C:43:3: note: in expansion of macro 'BALL_FOREACH_BOND'
   43 |   BALL_FOREACH_BOND(ac, atom_it, bond_it)
      |   ^~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/disulfidBondProcessor.C: In member function 'bool BALL::DisulfidBondProcessor::connect(BALL::Atom*, BALL::Atom*, bool)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/disulfidBondProcessor.C:121:31: warning: implicitly-declared 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  121 |      b_it  = atom2->beginBond();
      |                               ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/disulfidBondProcessor.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/disulfidBondProcessor.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:437:15: note: because 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::RandomAccessIterator<Container, DataType, Position, Traits>::RandomAccessIterator(const BALL::RandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
  437 |   BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/disulfidBondProcessor.C: In member function 'bool BALL::DisulfidBondProcessor::connect(BALL::Residue*, BALL::Residue*, bool)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/disulfidBondProcessor.C:194:31: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  194 |    a_it = residue2->beginAtom();
      |                               ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/disulfidBondProcessor.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/disulfidBondProcessor.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/disulfidBondProcessor.C: In member function 'bool BALL::DisulfidBondProcessor::disconnect(BALL::Residue*, BALL::Residue*)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/disulfidBondProcessor.C:338:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  338 |     a_it = residue2->beginAtom();
      |                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/disulfidBondProcessor.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/disulfidBondProcessor.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 76%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/DNAMutator.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/STRUCTURE/DNAMutator.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/DNAMutator.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/DNAMutator.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/DNAMutator.h:12,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/DNAMutator.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/DNAMutator.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/DNAMutator.h:12,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/DNAMutator.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/DNAMutator.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/DNAMutator.h:12,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/DNAMutator.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 76%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/fragmentDB.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/STRUCTURE/fragmentDB.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/fragmentDB.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/fragmentDB.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/fragmentDB.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/fragmentDB.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/fragmentDB.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/fragmentDB.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/fragmentDB.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/fragmentDB.C: In member function 'void BALL::FragmentDB::parseBonds_(BALL::ResourceEntry&, BALL::Fragment&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/fragmentDB.C:306:39: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  306 |     for (atom_it = fragment.beginAtom(); +atom_it; ++atom_it)
      |                                       ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/fragmentDB.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/fragmentDB.C: In member function 'void BALL::FragmentDB::parseBonds_(BALL::ResourceEntry&, BALL::Fragment&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/fragmentDB.C:306:39: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' first required here
  306 |     for (atom_it = fragment.beginAtom(); +atom_it; ++atom_it)
      |                                       ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/fragmentDB.C: In member function 'void BALL::FragmentDB::parseDelete_(BALL::ResourceEntry&, BALL::Fragment&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/fragmentDB.C:385:39: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  385 |     for (atom_it = fragment.beginAtom(); +atom_it; ++atom_it)
      |                                       ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/fragmentDB.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/fragmentDB.C: In member function 'void BALL::FragmentDB::parseRename_(BALL::ResourceEntry&, BALL::Fragment&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/fragmentDB.C:423:39: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  423 |     for (atom_it = fragment.beginAtom(); +atom_it; ++atom_it)
      |                                       ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/fragmentDB.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/fragmentDB.C: In member function 'void BALL::FragmentDB::NormalizeNamesProcessor::countHits_(BALL::HashMap<BALL::StringHashMap<BALL::String>*, int>&, const BALL::Fragment*, BALL::FragmentDB::NormalizeNamesProcessor::CountingMode)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/fragmentDB.C:1239:35: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
 1239 |    for (atom_it = frag->beginAtom(); +atom_it; ++atom_it)
      |                                   ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/fragmentDB.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/fragmentDB.C: In member function 'BALL::Size BALL::FragmentDB::BuildBondsProcessor::buildFragmentBonds(BALL::Fragment&, const BALL::Fragment&) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/fragmentDB.C:1483:49: warning: implicitly-declared 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
 1483 |    for (tplate_bond_it = tplate_atom->beginBond(); +tplate_bond_it; ++tplate_bond_it)
      |                                                 ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/fragmentDB.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:47:15: note: because 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   47 |   BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:24:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   24 |  class ConstRandomAccessIterator
      |        ^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/fragmentDB.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/fragmentDB.C: In member function 'BALL::Size BALL::FragmentDB::BuildBondsProcessor::buildFragmentBonds(BALL::Fragment&, const BALL::Fragment&) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/fragmentDB.C:1483:49: note: synthesized method 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' first required here
 1483 |    for (tplate_bond_it = tplate_atom->beginBond(); +tplate_bond_it; ++tplate_bond_it)
      |                                                 ^
[ 76%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/geometricProperties.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/STRUCTURE/geometricProperties.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/geometricProperties.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/geometricProperties.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/geometricProperties.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/geometricProperties.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/geometricProperties.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/geometricProperties.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/geometricProperties.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/geometricProperties.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/geometricProperties.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/geometricProperties.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/geometricProperties.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/geometricProperties.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/geometricProperties.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/geometricProperties.C: In member function 'virtual bool BALL::FragmentDistanceCollector::finish()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/geometricProperties.C:199:60: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  199 |   for (composite_it = reference_composite_->beginComposite();
      |                                                            ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/geometricProperties.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/geometricProperties.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/geometricProperties.C:223:50: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  223 |    for (atom_iterator2 = mol_fragment->beginAtom(); +atom_iterator2; ++ atom_iterator2)
      |                                                  ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/geometricProperties.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/geometricProperties.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/geometricProperties.C:238:52: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  238 |      for (atom_iterator2 = mol_fragment->beginAtom();
      |                                                    ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/geometricProperties.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/geometricProperties.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
[ 76%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/geometricTransformations.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/STRUCTURE/geometricTransformations.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/geometricTransformations.C
[ 76%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/graphEdge.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/STRUCTURE/graphEdge.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/graphEdge.C
[ 76%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/graphFace.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/STRUCTURE/graphFace.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/graphFace.C
[ 76%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/graphVertex.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/STRUCTURE/graphVertex.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/graphVertex.C
[ 76%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/HBondProcessor.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/STRUCTURE/HBondProcessor.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/HBondProcessor.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/HBondProcessor.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/HBondProcessor.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/HBondProcessor.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/HBondProcessor.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/HBondProcessor.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/HBondProcessor.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/HBondProcessor.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/HBondProcessor.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/HBondProcessor.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/HBondProcessor.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/HBondProcessor.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/HBondProcessor.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/HBondProcessor.C: In member function 'virtual BALL::Processor::Result BALL::HBondProcessor::operator()(BALL::Composite&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/HBondProcessor.C:101:25: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  101 |    ri = s->beginResidue();
      |                         ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/HBondProcessor.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/HBondProcessor.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Residue; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::ResidueIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Residue; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::ResidueIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/HBondProcessor.C: In member function 'virtual BALL::Processor::Result BALL::HBondProcessor::operator()(BALL::Composite&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/HBondProcessor.C:101:25: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>&)' first required here
  101 |    ri = s->beginResidue();
      |                         ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/HBondProcessor.C:107:25: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  107 |    ri = s->beginResidue();
      |                         ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/HBondProcessor.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/HBondProcessor.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Residue; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::ResidueIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/HBondProcessor.C:113:25: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  113 |    ri = s->beginResidue();
      |                         ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/HBondProcessor.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/HBondProcessor.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Residue; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::ResidueIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/HBondProcessor.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:108:49: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  108 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/HBondProcessor.C:129:4: note: in expansion of macro 'BALL_FOREACH_BOND'
  129 |    BALL_FOREACH_BOND(*ri_del, ai, bi)
      |    ^~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/HBondProcessor.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/HBondProcessor.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/HBondProcessor.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/HBondProcessor.C: In member function 'virtual BALL::Processor::Result BALL::HBondProcessor::operator()(BALL::Composite&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:108:49: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' first required here
  108 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/HBondProcessor.C:129:4: note: in expansion of macro 'BALL_FOREACH_BOND'
  129 |    BALL_FOREACH_BOND(*ri_del, ai, bi)
      |    ^~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:110:51: warning: implicitly-declared 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  110 |   for (bond_iterator = (*atom_iterator).beginBond(); \
      |                                                   ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/HBondProcessor.C:129:4: note: in expansion of macro 'BALL_FOREACH_BOND'
  129 |    BALL_FOREACH_BOND(*ri_del, ai, bi)
      |    ^~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/HBondProcessor.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/HBondProcessor.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:437:15: note: because 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::RandomAccessIterator<Container, DataType, Position, Traits>::RandomAccessIterator(const BALL::RandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
  437 |   BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:413:8: warning: implicitly-declared 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  413 |  class RandomAccessIterator
      |        ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:47:15: note: because 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   47 |   BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:24:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   24 |  class ConstRandomAccessIterator
      |        ^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/HBondProcessor.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/HBondProcessor.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/HBondProcessor.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/HBondProcessor.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:413:8: note: synthesized method 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' first required here
  413 |  class RandomAccessIterator
      |        ^~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/HBondProcessor.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/HBondProcessor.C: In member function 'virtual BALL::Processor::Result BALL::HBondProcessor::operator()(BALL::Composite&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:110:51: note: synthesized method 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' first required here
  110 |   for (bond_iterator = (*atom_iterator).beginBond(); \
      |                                                   ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/HBondProcessor.C:129:4: note: in expansion of macro 'BALL_FOREACH_BOND'
  129 |    BALL_FOREACH_BOND(*ri_del, ai, bi)
      |    ^~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/HBondProcessor.C: In member function 'bool BALL::HBondProcessor::finishWishartEtAl_()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/HBondProcessor.C:525:41: warning: implicitly-declared 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  525 |      for (bi = acceptors_[a]->beginBond(); +bi; ++bi)
      |                                         ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/HBondProcessor.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/HBondProcessor.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:437:15: note: because 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::RandomAccessIterator<Container, DataType, Position, Traits>::RandomAccessIterator(const BALL::RandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
  437 |   BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/HBondProcessor.C:533:38: warning: implicitly-declared 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  533 |      for (bi = donors_[d]->beginBond(); +bi; ++bi)
      |                                      ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/HBondProcessor.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/HBondProcessor.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:437:15: note: because 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::RandomAccessIterator<Container, DataType, Position, Traits>::RandomAccessIterator(const BALL::RandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
  437 |   BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/HBondProcessor.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h: In instantiation of 'BALL::Index BALL::HashGrid3<Item>::getIndex_(const BALL::HashGridBox3<Item>&) const [with Item = BALL::HBondProcessor::ResidueData*; BALL::Index = int]':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:1516:17:   required from 'bool BALL::HashGrid3<Item>::getIndices(const BALL::HashGridBox3<Item>&, BALL::Position&, BALL::Position&, BALL::Position&) const [with Item = BALL::HBondProcessor::ResidueData*; BALL::Position = unsigned int]'
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:563:21:   required from 'void BALL::HashGridBox3<Item>::getIndices(BALL::Position&, BALL::Position&, BALL::Position&) [with Item = BALL::HBondProcessor::ResidueData*; BALL::Position = unsigned int]'
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:206:13:   required from 'BALL::HashGridBox3<Item>::BoxIteratorTraits::BoxIteratorTraits(const BALL::HashGridBox3<Item>&) [with Item = BALL::HBondProcessor::ResidueData*]'
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/baseIterator.h:190:23:   required from 'BALL::BaseIterator<Container, DataType, Position, Traits>::BaseIterator(const Container&) [with Container = BALL::HashGridBox3<BALL::HBondProcessor::ResidueData*>; DataType = BALL::HashGridBox3<BALL::HBondProcessor::ResidueData*>; Position = unsigned int; Traits = BALL::HashGridBox3<BALL::HBondProcessor::ResidueData*>::BoxIteratorTraits]'
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/forwardIterator.h:128:67:   required from 'BALL::ConstForwardIterator<Container, DataType, Position, Traits>::ConstForwardIterator(const Container&) [with Container = BALL::HashGridBox3<BALL::HBondProcessor::ResidueData*>; DataType = BALL::HashGridBox3<BALL::HBondProcessor::ResidueData*>; Position = unsigned int; Traits = BALL::HashGridBox3<BALL::HBondProcessor::ResidueData*>::BoxIteratorTraits]'
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/forwardIterator.h:298:20:   required from 'BALL::ForwardIterator<Container, DataType, Position, Traits>::ForwardIterator(const Container&) [with Container = BALL::HashGridBox3<BALL::HBondProcessor::ResidueData*>; DataType = BALL::HashGridBox3<BALL::HBondProcessor::ResidueData*>; Position = unsigned int; Traits = BALL::HashGridBox3<BALL::HBondProcessor::ResidueData*>::BoxIteratorTraits]'
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/forwardIterator.h:309:19:   required from 'static BALL::ForwardIterator<Container, DataType, Position, Traits> BALL::ForwardIterator<Container, DataType, Position, Traits>::begin(const Container&) [with Container = BALL::HashGridBox3<BALL::HBondProcessor::ResidueData*>; DataType = BALL::HashGridBox3<BALL::HBondProcessor::ResidueData*>; Position = unsigned int; Traits = BALL::HashGridBox3<BALL::HBondProcessor::ResidueData*>::BoxIteratorTraits]'
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:332:29:   required from 'BALL::HashGridBox3<Item>::BoxIterator BALL::HashGridBox3<Item>::beginBox() [with Item = BALL::HBondProcessor::ResidueData*; BALL::HashGridBox3<Item>::BoxIterator = BALL::ForwardIterator<BALL::HashGridBox3<BALL::HBondProcessor::ResidueData*>, BALL::HashGridBox3<BALL::HBondProcessor::ResidueData*>, unsigned int, BALL::HashGridBox3<BALL::HBondProcessor::ResidueData*>::BoxIteratorTraits>]'
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/HBondProcessor.C:350:68:   required from here
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:1726:46: warning: comparison of integer expressions of different signedness: 'int' and 'BALL::Size' {aka 'unsigned int'} [-Wsign-compare]
 1726 |   if ((&box < &box_[0]) || (&box - &box_[0]  >= getSize()))
      |                            ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~
[ 76%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/hybridisationProcessor.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/STRUCTURE/hybridisationProcessor.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/hybridisationProcessor.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/hybridisationProcessor.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/hybridisationProcessor.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/hybridisationProcessor.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/hybridisationProcessor.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/hybridisationProcessor.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/hybridisationProcessor.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/hybridisationProcessor.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/hybridisationProcessor.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/hybridisationProcessor.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/hybridisationProcessor.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/hybridisationProcessor.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/hybridisationProcessor.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/hybridisationProcessor.C: In member function 'double BALL::HybridisationProcessor::AverageBondAngle_(BALL::Atom*)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/hybridisationProcessor.C:112:29: warning: implicitly-declared 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  112 |   for (b_it1 = a->beginBond(); +b_it1; ++b_it1)
      |                             ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/hybridisationProcessor.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/hybridisationProcessor.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:437:15: note: because 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::RandomAccessIterator<Container, DataType, Position, Traits>::RandomAccessIterator(const BALL::RandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
  437 |   BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:413:8: warning: implicitly-declared 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  413 |  class RandomAccessIterator
      |        ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:47:15: note: because 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   47 |   BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:24:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   24 |  class ConstRandomAccessIterator
      |        ^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/hybridisationProcessor.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/hybridisationProcessor.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/hybridisationProcessor.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/hybridisationProcessor.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:413:8: note: synthesized method 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' first required here
  413 |  class RandomAccessIterator
      |        ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/hybridisationProcessor.C: In member function 'double BALL::HybridisationProcessor::AverageBondAngle_(BALL::Atom*)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/hybridisationProcessor.C:112:29: note: synthesized method 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' first required here
  112 |   for (b_it1 = a->beginBond(); +b_it1; ++b_it1)
      |                             ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/hybridisationProcessor.C:114:12: warning: implicitly-declared 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  114 |    b_it2 = b_it1;
      |            ^~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/hybridisationProcessor.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/hybridisationProcessor.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:437:15: note: because 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::RandomAccessIterator<Container, DataType, Position, Traits>::RandomAccessIterator(const BALL::RandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
  437 |   BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/hybridisationProcessor.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/hybridisationProcessor.C: In member function 'virtual BALL::Processor::Result BALL::HybridisationProcessor::operator()(BALL::AtomContainer&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:64:49: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   64 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/hybridisationProcessor.C:147:4: note: in expansion of macro 'BALL_FOREACH_ATOM'
  147 |    BALL_FOREACH_ATOM(ac, ait)
      |    ^~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/hybridisationProcessor.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/hybridisationProcessor.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/hybridisationProcessor.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/hybridisationProcessor.C: In member function 'virtual BALL::Processor::Result BALL::HybridisationProcessor::operator()(BALL::AtomContainer&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:64:49: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' first required here
   64 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/hybridisationProcessor.C:147:4: note: in expansion of macro 'BALL_FOREACH_ATOM'
  147 |    BALL_FOREACH_ATOM(ac, ait)
      |    ^~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/hybridisationProcessor.C:217:28: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  217 |    for (ait = ac.beginAtom(); +ait; ++ait)
      |                            ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/hybridisationProcessor.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/hybridisationProcessor.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/hybridisationProcessor.C:365:28: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  365 |    for (ait = ac.beginAtom(); +ait; ++ait)
      |                            ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/hybridisationProcessor.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/hybridisationProcessor.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/hybridisationProcessor.C:371:33: warning: implicitly-declared 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  371 |      for (b_it = ait->beginBond(); +b_it; ++b_it)
      |                                 ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/hybridisationProcessor.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/hybridisationProcessor.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:437:15: note: because 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::RandomAccessIterator<Container, DataType, Position, Traits>::RandomAccessIterator(const BALL::RandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
  437 |   BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/hybridisationProcessor.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:64:49: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   64 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/hybridisationProcessor.C:410:4: note: in expansion of macro 'BALL_FOREACH_ATOM'
  410 |    BALL_FOREACH_ATOM(ac, ait)
      |    ^~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/hybridisationProcessor.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/hybridisationProcessor.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/hybridisationProcessor.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:64:49: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   64 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/hybridisationProcessor.C:418:4: note: in expansion of macro 'BALL_FOREACH_ATOM'
  418 |    BALL_FOREACH_ATOM(ac, ait)
      |    ^~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/hybridisationProcessor.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/hybridisationProcessor.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 76%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/kekulizer.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/STRUCTURE/kekulizer.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/kekulizer.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/kekulizer.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/kekulizer.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/kekulizer.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/kekulizer.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/kekulizer.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/kekulizer.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/kekulizer.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/kekulizer.C: In member function 'bool BALL::Kekuliser::setup(BALL::Molecule&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:108:49: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  108 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/kekulizer.C:197:2: note: in expansion of macro 'BALL_FOREACH_BOND'
  197 |  BALL_FOREACH_BOND(mol, ait, bit)
      |  ^~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/kekulizer.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/kekulizer.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/kekulizer.C: In member function 'bool BALL::Kekuliser::setup(BALL::Molecule&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:108:49: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' first required here
  108 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/kekulizer.C:197:2: note: in expansion of macro 'BALL_FOREACH_BOND'
  197 |  BALL_FOREACH_BOND(mol, ait, bit)
      |  ^~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:110:51: warning: implicitly-declared 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  110 |   for (bond_iterator = (*atom_iterator).beginBond(); \
      |                                                   ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/kekulizer.C:197:2: note: in expansion of macro 'BALL_FOREACH_BOND'
  197 |  BALL_FOREACH_BOND(mol, ait, bit)
      |  ^~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/kekulizer.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:437:15: note: because 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::RandomAccessIterator<Container, DataType, Position, Traits>::RandomAccessIterator(const BALL::RandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
  437 |   BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:413:8: warning: implicitly-declared 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  413 |  class RandomAccessIterator
      |        ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:47:15: note: because 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   47 |   BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:24:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   24 |  class ConstRandomAccessIterator
      |        ^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/kekulizer.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/kekulizer.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:413:8: note: synthesized method 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' first required here
  413 |  class RandomAccessIterator
      |        ^~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/kekulizer.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/kekulizer.C: In member function 'bool BALL::Kekuliser::setup(BALL::Molecule&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:110:51: note: synthesized method 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' first required here
  110 |   for (bond_iterator = (*atom_iterator).beginBond(); \
      |                                                   ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/kekulizer.C:197:2: note: in expansion of macro 'BALL_FOREACH_BOND'
  197 |  BALL_FOREACH_BOND(mol, ait, bit)
      |  ^~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/kekulizer.C: In member function 'bool BALL::Kekuliser::fixAromaticRings_()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/kekulizer.C:374:25: warning: implicitly-declared 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  374 |    bit = atom.beginBond();
      |                         ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/kekulizer.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:437:15: note: because 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::RandomAccessIterator<Container, DataType, Position, Traits>::RandomAccessIterator(const BALL::RandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
  437 |   BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/kekulizer.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/kekulizer.C: In member function 'void BALL::Kekuliser::collectAromaticAtoms_()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:64:49: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   64 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/kekulizer.C:587:2: note: in expansion of macro 'BALL_FOREACH_ATOM'
  587 |  BALL_FOREACH_ATOM(*molecule_, ait)
      |  ^~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/kekulizer.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 76%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/molecularSimilarity.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/STRUCTURE/molecularSimilarity.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/molecularSimilarity.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/molecularSimilarity.h:22,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/molecularSimilarity.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/molecularSimilarity.h:22,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/molecularSimilarity.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/molecularSimilarity.h:22,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/molecularSimilarity.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/molecularSimilarity.h:22,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/molecularSimilarity.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/molecularSimilarity.h:22,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/molecularSimilarity.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/molecularSimilarity.h:22,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/molecularSimilarity.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/molecularSimilarity.C: In member function 'void BALL::MolecularSimilarity::generateFingerprint(BALL::Molecule&, std::vector<unsigned int>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/molecularSimilarity.C:405:26: warning: catching polymorphic type 'class BALL::Exception::GeneralException' by value [-Wcatch-value=]
  405 |   catch(BALL::Exception::GeneralException)
      |                          ^~~~~~~~~~~~~~~~
[ 76%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/mutator.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/STRUCTURE/mutator.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/mutator.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/mutator.C:3:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/mutator.C:3:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/mutator.C:3:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/mutator.C:3:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/mutator.C:3:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/mutator.C:3:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 76%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/nucleotideMapping.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/STRUCTURE/nucleotideMapping.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/nucleotideMapping.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/nucleotideMapping.C:4:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/nucleotideMapping.C:4:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/nucleotideMapping.C:4:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/nucleotideMapping.C:4:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/nucleotideMapping.C:4:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/nucleotideMapping.C:4:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 76%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/numericalSAS.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/STRUCTURE/numericalSAS.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/numericalSAS.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/geometricProperties.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/numericalSAS.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/numericalSAS.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/numericalSAS.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/geometricProperties.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/numericalSAS.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/numericalSAS.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/numericalSAS.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/geometricProperties.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/numericalSAS.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/numericalSAS.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/numericalSAS.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/numericalSAS.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h: In instantiation of 'BALL::Index BALL::HashGrid3<Item>::getIndex_(const BALL::HashGridBox3<Item>&) const [with Item = const BALL::Atom*; BALL::Index = int]':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:1516:17:   required from 'bool BALL::HashGrid3<Item>::getIndices(const BALL::HashGridBox3<Item>&, BALL::Position&, BALL::Position&, BALL::Position&) const [with Item = const BALL::Atom*; BALL::Position = unsigned int]'
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:563:21:   required from 'void BALL::HashGridBox3<Item>::getIndices(BALL::Position&, BALL::Position&, BALL::Position&) [with Item = const BALL::Atom*; BALL::Position = unsigned int]'
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:206:13:   required from 'BALL::HashGridBox3<Item>::BoxIteratorTraits::BoxIteratorTraits(const BALL::HashGridBox3<Item>&) [with Item = const BALL::Atom*]'
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/baseIterator.h:190:23:   required from 'BALL::BaseIterator<Container, DataType, Position, Traits>::BaseIterator(const Container&) [with Container = BALL::HashGridBox3<const BALL::Atom*>; DataType = BALL::HashGridBox3<const BALL::Atom*>; Position = unsigned int; Traits = BALL::HashGridBox3<const BALL::Atom*>::BoxIteratorTraits]'
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/forwardIterator.h:128:67:   required from 'BALL::ConstForwardIterator<Container, DataType, Position, Traits>::ConstForwardIterator(const Container&) [with Container = BALL::HashGridBox3<const BALL::Atom*>; DataType = BALL::HashGridBox3<const BALL::Atom*>; Position = unsigned int; Traits = BALL::HashGridBox3<const BALL::Atom*>::BoxIteratorTraits]'
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/forwardIterator.h:298:20:   required from 'BALL::ForwardIterator<Container, DataType, Position, Traits>::ForwardIterator(const Container&) [with Container = BALL::HashGridBox3<const BALL::Atom*>; DataType = BALL::HashGridBox3<const BALL::Atom*>; Position = unsigned int; Traits = BALL::HashGridBox3<const BALL::Atom*>::BoxIteratorTraits]'
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/forwardIterator.h:309:19:   required from 'static BALL::ForwardIterator<Container, DataType, Position, Traits> BALL::ForwardIterator<Container, DataType, Position, Traits>::begin(const Container&) [with Container = BALL::HashGridBox3<const BALL::Atom*>; DataType = BALL::HashGridBox3<const BALL::Atom*>; Position = unsigned int; Traits = BALL::HashGridBox3<const BALL::Atom*>::BoxIteratorTraits]'
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:332:29:   required from 'BALL::HashGridBox3<Item>::BoxIterator BALL::HashGridBox3<Item>::beginBox() [with Item = const BALL::Atom*; BALL::HashGridBox3<Item>::BoxIterator = BALL::ForwardIterator<BALL::HashGridBox3<const BALL::Atom*>, BALL::HashGridBox3<const BALL::Atom*>, unsigned int, BALL::HashGridBox3<const BALL::Atom*>::BoxIteratorTraits>]'
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/numericalSAS.C:150:73:   required from here
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:1726:46: warning: comparison of integer expressions of different signedness: 'int' and 'BALL::Size' {aka 'unsigned int'} [-Wsign-compare]
 1726 |   if ((&box < &box_[0]) || (&box - &box_[0]  >= getSize()))
      |                            ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~
[ 76%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/peptides.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/STRUCTURE/peptides.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/peptides.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chain.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chainIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/protein.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/peptides.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/peptides.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chain.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chainIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/protein.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/peptides.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/peptides.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chain.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chainIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/protein.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/peptides.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/peptides.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chain.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chainIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/protein.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/peptides.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/peptides.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chain.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chainIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/protein.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/peptides.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/peptides.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chain.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chainIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/protein.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/peptides.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/peptides.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 76%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/peptideBuilder.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/STRUCTURE/peptideBuilder.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/peptideBuilder.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chain.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chainIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/protein.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/peptides.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/peptideBuilder.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/peptideBuilder.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chain.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chainIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/protein.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/peptides.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/peptideBuilder.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/peptideBuilder.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chain.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chainIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/protein.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/peptides.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/peptideBuilder.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/peptideBuilder.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chain.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chainIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/protein.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/peptides.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/peptideBuilder.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/peptideBuilder.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chain.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chainIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/protein.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/peptides.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/peptideBuilder.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/peptideBuilder.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chain.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chainIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/protein.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/peptides.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/peptideBuilder.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/peptideBuilder.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/peptideBuilder.C: In member function 'BALL::PDBAtom* BALL::Peptides::PeptideBuilder::getAtomByName_(BALL::Residue&, const BALL::String&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/peptideBuilder.C:616:31: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::PDBAtom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::PDBAtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::PDBAtom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::PDBAtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::PDBAtom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::PDBAtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  616 |    for (ai = res.beginPDBAtom(); +ai; ++ai)
      |                               ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chain.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chainIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/protein.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/peptides.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/peptideBuilder.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/peptideBuilder.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::PDBAtom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::PDBAtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::PDBAtom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::PDBAtomIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::PDBAtom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::PDBAtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::PDBAtom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::PDBAtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::PDBAtom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::PDBAtomIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::PDBAtom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::PDBAtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::PDBAtom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::PDBAtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::PDBAtom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::PDBAtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::PDBAtom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::PDBAtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::PDBAtom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::PDBAtomIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/peptideBuilder.C: In member function 'BALL::PDBAtom* BALL::Peptides::PeptideBuilder::getAtomByName_(BALL::Residue&, const BALL::String&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/peptideBuilder.C:616:31: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::PDBAtom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::PDBAtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::PDBAtom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::PDBAtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::PDBAtom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::PDBAtomIteratorTraits>&)' first required here
  616 |    for (ai = res.beginPDBAtom(); +ai; ++ai)
      |                               ^
[ 76%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/peptideCapProcessor.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/STRUCTURE/peptideCapProcessor.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/peptideCapProcessor.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/peptideCapProcessor.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/peptideCapProcessor.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/peptideCapProcessor.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/peptideCapProcessor.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/peptideCapProcessor.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/peptideCapProcessor.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/peptideCapProcessor.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/peptideCapProcessor.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/peptideCapProcessor.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/peptideCapProcessor.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/peptideCapProcessor.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/peptideCapProcessor.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/peptideCapProcessor.C: In member function 'virtual BALL::Processor::Result BALL::PeptideCapProcessor::operator()(BALL::Chain&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/peptideCapProcessor.C:211:44: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  211 |    n_atom = chain.getResidue(0)->beginAtom();
      |                                            ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/peptideCapProcessor.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/peptideCapProcessor.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/peptideCapProcessor.C: In member function 'virtual BALL::Processor::Result BALL::PeptideCapProcessor::operator()(BALL::Chain&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/peptideCapProcessor.C:211:44: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' first required here
  211 |    n_atom = chain.getResidue(0)->beginAtom();
      |                                            ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/peptideCapProcessor.C:239:44: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  239 |    n_atom = chain.getResidue(1)->beginAtom();
      |                                            ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/peptideCapProcessor.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/peptideCapProcessor.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 76%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/radialDistributionFunction.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/STRUCTURE/radialDistributionFunction.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/radialDistributionFunction.C
[ 76%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/reconstructFragmentProcessor.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/STRUCTURE/reconstructFragmentProcessor.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/reconstructFragmentProcessor.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/reconstructFragmentProcessor.h:23,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/reconstructFragmentProcessor.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/matrix44.h:23,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/reconstructFragmentProcessor.h:19,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/reconstructFragmentProcessor.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/reconstructFragmentProcessor.h:23,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/reconstructFragmentProcessor.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/matrix44.h:23,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/reconstructFragmentProcessor.h:19,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/reconstructFragmentProcessor.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/reconstructFragmentProcessor.h:23,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/reconstructFragmentProcessor.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/matrix44.h:23,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/reconstructFragmentProcessor.h:19,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/reconstructFragmentProcessor.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/reconstructFragmentProcessor.C: In static member function 'static BALL::Triple<bool, const BALL::Atom*, const BALL::Atom*> BALL::ReconstructFragmentProcessor::getTwoReferenceAtoms(const BALL::Atom&, const BALL::HashSet<const BALL::Atom*>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/reconstructFragmentProcessor.C:77:34: warning: implicitly-declared 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   77 |       bond = (*current)->endBond();
      |                                  ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/reconstructFragmentProcessor.h:23,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/reconstructFragmentProcessor.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:47:15: note: because 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   47 |   BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:24:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   24 |  class ConstRandomAccessIterator
      |        ^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/matrix44.h:23,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/reconstructFragmentProcessor.h:19,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/reconstructFragmentProcessor.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/reconstructFragmentProcessor.C: In static member function 'static BALL::Triple<bool, const BALL::Atom*, const BALL::Atom*> BALL::ReconstructFragmentProcessor::getTwoReferenceAtoms(const BALL::Atom&, const BALL::HashSet<const BALL::Atom*>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/reconstructFragmentProcessor.C:77:34: note: synthesized method 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' first required here
   77 |       bond = (*current)->endBond();
      |                                  ^
[ 76%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/RDFIntegrator.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/STRUCTURE/RDFIntegrator.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/RDFIntegrator.C
[ 76%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/RDFParameter.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/STRUCTURE/RDFParameter.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/RDFParameter.C
[ 76%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/RDFSection.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/STRUCTURE/RDFSection.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/RDFSection.C
[ 76%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/reducedSurface.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/STRUCTURE/reducedSurface.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/reducedSurface.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/forwardIterator.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashSet.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/simpleBox3.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/reducedSurface.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/reducedSurface.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/baseIterator.h: In instantiation of 'BALL::BaseIterator<Container, DataType, Position, Traits>& BALL::BaseIterator<Container, DataType, Position, Traits>::operator=(const BALL::BaseIterator<Container, DataType, Position, Traits>&) [with Container = BALL::HashGridBox3<unsigned int>; DataType = BALL::HashGridBox3<unsigned int>; Position = unsigned int; Traits = BALL::HashGridBox3<unsigned int>::BoxIteratorTraits]':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/forwardIterator.h:63:68:   required from 'BALL::ConstForwardIterator<Container, DataType, Position, Traits>& BALL::ConstForwardIterator<Container, DataType, Position, Traits>::operator=(const BALL::ConstForwardIterator<Container, DataType, Position, Traits>&) [with Container = BALL::HashGridBox3<unsigned int>; DataType = BALL::HashGridBox3<unsigned int>; Position = unsigned int; Traits = BALL::HashGridBox3<unsigned int>::BoxIteratorTraits]'
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/reducedSurface.C:1883:27:   required from here
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/baseIterator.h:111:12: warning: implicitly-declared 'BALL::HashGridBox3<unsigned int>::BoxIteratorTraits& BALL::HashGridBox3<unsigned int>::BoxIteratorTraits::operator=(const BALL::HashGridBox3<unsigned int>::BoxIteratorTraits&)' is deprecated [-Wdeprecated-copy]
  111 |    traits_ = iterator.traits_;
      |    ~~~~~~~~^~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/reducedSurface.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:209:4: note: because 'BALL::HashGridBox3<unsigned int>::BoxIteratorTraits' has user-provided 'BALL::HashGridBox3<Item>::BoxIteratorTraits::BoxIteratorTraits(const BALL::HashGridBox3<Item>::BoxIteratorTraits&, bool) [with Item = unsigned int]'
  209 |    BoxIteratorTraits(const BoxIteratorTraits& traits, bool /* deep */ = true)
      |    ^~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h: In instantiation of 'BALL::Index BALL::HashGrid3<Item>::getIndex_(const BALL::HashGridBox3<Item>&) const [with Item = unsigned int; BALL::Index = int]':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:1516:17:   required from 'bool BALL::HashGrid3<Item>::getIndices(const BALL::HashGridBox3<Item>&, BALL::Position&, BALL::Position&, BALL::Position&) const [with Item = unsigned int; BALL::Position = unsigned int]'
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:563:21:   required from 'void BALL::HashGridBox3<Item>::getIndices(BALL::Position&, BALL::Position&, BALL::Position&) [with Item = unsigned int; BALL::Position = unsigned int]'
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:206:13:   required from 'BALL::HashGridBox3<Item>::BoxIteratorTraits::BoxIteratorTraits(const BALL::HashGridBox3<Item>&) [with Item = unsigned int]'
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/baseIterator.h:190:23:   required from 'BALL::BaseIterator<Container, DataType, Position, Traits>::BaseIterator(const Container&) [with Container = BALL::HashGridBox3<unsigned int>; DataType = BALL::HashGridBox3<unsigned int>; Position = unsigned int; Traits = BALL::HashGridBox3<unsigned int>::BoxIteratorTraits]'
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/forwardIterator.h:128:67:   required from 'BALL::ConstForwardIterator<Container, DataType, Position, Traits>::ConstForwardIterator(const Container&) [with Container = BALL::HashGridBox3<unsigned int>; DataType = BALL::HashGridBox3<unsigned int>; Position = unsigned int; Traits = BALL::HashGridBox3<unsigned int>::BoxIteratorTraits]'
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/forwardIterator.h:298:20:   required from 'BALL::ForwardIterator<Container, DataType, Position, Traits>::ForwardIterator(const Container&) [with Container = BALL::HashGridBox3<unsigned int>; DataType = BALL::HashGridBox3<unsigned int>; Position = unsigned int; Traits = BALL::HashGridBox3<unsigned int>::BoxIteratorTraits]'
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/forwardIterator.h:309:19:   required from 'static BALL::ForwardIterator<Container, DataType, Position, Traits> BALL::ForwardIterator<Container, DataType, Position, Traits>::begin(const Container&) [with Container = BALL::HashGridBox3<unsigned int>; DataType = BALL::HashGridBox3<unsigned int>; Position = unsigned int; Traits = BALL::HashGridBox3<unsigned int>::BoxIteratorTraits]'
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:332:29:   required from 'BALL::HashGridBox3<Item>::BoxIterator BALL::HashGridBox3<Item>::beginBox() [with Item = unsigned int; BALL::HashGridBox3<Item>::BoxIterator = BALL::ForwardIterator<BALL::HashGridBox3<unsigned int>, BALL::HashGridBox3<unsigned int>, unsigned int, BALL::HashGridBox3<unsigned int>::BoxIteratorTraits>]'
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/reducedSurface.C:1883:27:   required from here
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:1726:46: warning: comparison of integer expressions of different signedness: 'int' and 'BALL::Size' {aka 'unsigned int'} [-Wsign-compare]
 1726 |   if ((&box < &box_[0]) || (&box - &box_[0]  >= getSize()))
      |                            ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~
[ 80%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/residueChecker.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/STRUCTURE/residueChecker.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/residueChecker.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/residueChecker.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/residueChecker.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/residueChecker.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/residueChecker.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/residueChecker.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/residueChecker.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/residueChecker.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/residueChecker.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/residueChecker.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/residueChecker.C: In member function 'bool BALL::ResidueChecker::checkCompleteness(const BALL::Residue&, const BALL::Residue&, const BALL::String&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/residueChecker.C:218:38: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  218 |   for (atom_it = reference.beginAtom(); +atom_it; ++atom_it)
      |                                      ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/residueChecker.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/residueChecker.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/residueChecker.C:224:36: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  224 |   for (atom_it = residue.beginAtom(); +atom_it; ++atom_it)
      |                                    ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/residueChecker.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/residueChecker.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/residueChecker.C: In member function 'bool BALL::ResidueChecker::checkAtomPositions(const BALL::Residue&, const BALL::String&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/residueChecker.C:278:32: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  278 |   for (atom_it = res.beginAtom(); +atom_it; ++atom_it)
      |                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/residueChecker.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/residueChecker.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/residueChecker.C:298:20: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  298 |    for (atom_it2 = atom_it, ++atom_it2; +atom_it2; ++atom_it2)
      |                    ^~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/residueChecker.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/residueChecker.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/residueChecker.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/residueChecker.C: In member function 'bool BALL::ResidueChecker::checkTemplate(const BALL::Residue&, const BALL::Residue&, const BALL::String&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:108:49: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  108 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/residueChecker.C:393:3: note: in expansion of macro 'BALL_FOREACH_BOND'
  393 |   BALL_FOREACH_BOND(reference, bond_atom_it, bond_it)
      |   ^~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/residueChecker.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/residueChecker.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/residueChecker.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:110:51: warning: implicitly-declared 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  110 |   for (bond_iterator = (*atom_iterator).beginBond(); \
      |                                                   ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/residueChecker.C:393:3: note: in expansion of macro 'BALL_FOREACH_BOND'
  393 |   BALL_FOREACH_BOND(reference, bond_atom_it, bond_it)
      |   ^~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/residueChecker.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:47:15: note: because 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   47 |   BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:24:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   24 |  class ConstRandomAccessIterator
      |        ^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/residueChecker.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/residueChecker.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/residueChecker.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/residueChecker.C: In member function 'bool BALL::ResidueChecker::checkTemplate(const BALL::Residue&, const BALL::Residue&, const BALL::String&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:110:51: note: synthesized method 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' first required here
  110 |   for (bond_iterator = (*atom_iterator).beginBond(); \
      |                                                   ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/residueChecker.C:393:3: note: in expansion of macro 'BALL_FOREACH_BOND'
  393 |   BALL_FOREACH_BOND(reference, bond_atom_it, bond_it)
      |   ^~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/residueChecker.C:397:37: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  397 |    for (atom_it = residue.beginAtom(); +atom_it && (first == 0 || second == 0); ++atom_it)
      |                                     ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/residueChecker.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/residueChecker.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
[ 80%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/rGroupAssembler.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/STRUCTURE/rGroupAssembler.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/rGroupAssembler.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/rGroupAssembler.C:2:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/rGroupAssembler.C:2:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/rGroupAssembler.C:2:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/rGroupAssembler.C:2:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/rGroupAssembler.C:2:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/rGroupAssembler.C:2:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 80%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/ringAnalyser.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/STRUCTURE/ringAnalyser.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/ringAnalyser.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/ringAnalyser.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/ringAnalyser.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/ringAnalyser.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/ringAnalyser.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/ringAnalyser.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/ringAnalyser.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/ringAnalyser.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/ringAnalyser.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/ringAnalyser.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/ringAnalyser.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/ringAnalyser.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/ringAnalyser.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 80%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/RSEdge.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/STRUCTURE/RSEdge.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/RSEdge.C
[ 80%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/RSFace.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/STRUCTURE/RSFace.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/RSFace.C
[ 80%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/RSVertex.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/STRUCTURE/RSVertex.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/RSVertex.C
[ 80%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/SASEdge.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/STRUCTURE/SASEdge.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/SASEdge.C
[ 80%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/SASFace.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/STRUCTURE/SASFace.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/SASFace.C
[ 80%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/SASVertex.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/STRUCTURE/SASVertex.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/SASVertex.C
[ 80%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/sdGenerator.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/STRUCTURE/sdGenerator.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/sdGenerator.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/ringAnalyser.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/sdGenerator.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/sdGenerator.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/sdGenerator.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/sdGenerator.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/ringAnalyser.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/sdGenerator.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/sdGenerator.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/sdGenerator.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/sdGenerator.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/ringAnalyser.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/sdGenerator.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/sdGenerator.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/sdGenerator.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/sdGenerator.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/sdGenerator.C:15:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/sdGenerator.C: In member function 'void BALL::SDGenerator::prepare_()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:64:49: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   64 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/sdGenerator.C:56:4: note: in expansion of macro 'BALL_FOREACH_ATOM'
   56 |    BALL_FOREACH_ATOM(*system_, at_it)
      |    ^~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/sdGenerator.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/sdGenerator.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/sdGenerator.C:15:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/sdGenerator.C: In member function 'void BALL::SDGenerator::prepare_()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:64:49: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' first required here
   64 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/sdGenerator.C:56:4: note: in expansion of macro 'BALL_FOREACH_ATOM'
   56 |    BALL_FOREACH_ATOM(*system_, at_it)
      |    ^~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:64:49: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   64 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/sdGenerator.C:89:3: note: in expansion of macro 'BALL_FOREACH_ATOM'
   89 |   BALL_FOREACH_ATOM(*system_, at_it)
      |   ^~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/sdGenerator.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/sdGenerator.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/sdGenerator.C:15:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:77:49: warning: implicitly-declared 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   77 | for (bond_iterator = (bond_container).beginBond(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/sdGenerator.C:117:6: note: in expansion of macro 'BALL_FOREACH_ATOM_BOND'
  117 |      BALL_FOREACH_ATOM_BOND(*at_it, bond_it)
      |      ^~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/ringAnalyser.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/sdGenerator.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/sdGenerator.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:437:15: note: because 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::RandomAccessIterator<Container, DataType, Position, Traits>::RandomAccessIterator(const BALL::RandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
  437 |   BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:413:8: warning: implicitly-declared 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  413 |  class RandomAccessIterator
      |        ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:47:15: note: because 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   47 |   BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:24:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   24 |  class ConstRandomAccessIterator
      |        ^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/sdGenerator.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/sdGenerator.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/ringAnalyser.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/sdGenerator.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/sdGenerator.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:413:8: note: synthesized method 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' first required here
  413 |  class RandomAccessIterator
      |        ^~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/sdGenerator.C:15:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/sdGenerator.C: In member function 'void BALL::SDGenerator::prepare_()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:77:49: note: synthesized method 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' first required here
   77 | for (bond_iterator = (bond_container).beginBond(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/sdGenerator.C:117:6: note: in expansion of macro 'BALL_FOREACH_ATOM_BOND'
  117 |      BALL_FOREACH_ATOM_BOND(*at_it, bond_it)
      |      ^~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:77:49: warning: implicitly-declared 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   77 | for (bond_iterator = (bond_container).beginBond(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/sdGenerator.C:143:7: note: in expansion of macro 'BALL_FOREACH_ATOM_BOND'
  143 |       BALL_FOREACH_ATOM_BOND(*partner, next_bond_it)
      |       ^~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/ringAnalyser.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/sdGenerator.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/sdGenerator.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:437:15: note: because 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::RandomAccessIterator<Container, DataType, Position, Traits>::RandomAccessIterator(const BALL::RandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
  437 |   BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/sdGenerator.C:15:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/sdGenerator.C: In member function 'void BALL::SDGenerator::clear()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:64:49: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   64 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/sdGenerator.C:199:3: note: in expansion of macro 'BALL_FOREACH_ATOM'
  199 |   BALL_FOREACH_ATOM(*system_, at_it)
      |   ^~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/sdGenerator.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/sdGenerator.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/sdGenerator.C:15:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/sdGenerator.C: In member function 'void BALL::SDGenerator::generateSD(BALL::System&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:64:49: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   64 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/sdGenerator.C:252:3: note: in expansion of macro 'BALL_FOREACH_ATOM'
  252 |   BALL_FOREACH_ATOM(*system_, at_it)
      |   ^~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/sdGenerator.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/sdGenerator.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/sdGenerator.C:15:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/sdGenerator.C: In member function 'void BALL::SDGenerator::computeShelleyPriorities_()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:64:49: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   64 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/sdGenerator.C:311:3: note: in expansion of macro 'BALL_FOREACH_ATOM'
  311 |   BALL_FOREACH_ATOM(*system_, at_it)
      |   ^~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/sdGenerator.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/sdGenerator.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/sdGenerator.C:15:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:64:49: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   64 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/sdGenerator.C:318:4: note: in expansion of macro 'BALL_FOREACH_ATOM'
  318 |    BALL_FOREACH_ATOM(*system_, at_it)
      |    ^~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/sdGenerator.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/sdGenerator.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/sdGenerator.C:15:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:77:49: warning: implicitly-declared 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   77 | for (bond_iterator = (bond_container).beginBond(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/sdGenerator.C:324:5: note: in expansion of macro 'BALL_FOREACH_ATOM_BOND'
  324 |     BALL_FOREACH_ATOM_BOND(*at_it, b_it)
      |     ^~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/ringAnalyser.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/sdGenerator.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/sdGenerator.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:437:15: note: because 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::RandomAccessIterator<Container, DataType, Position, Traits>::RandomAccessIterator(const BALL::RandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
  437 |   BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/sdGenerator.C:15:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:64:49: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   64 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/sdGenerator.C:337:3: note: in expansion of macro 'BALL_FOREACH_ATOM'
  337 |   BALL_FOREACH_ATOM(*system_, at_it)
      |   ^~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/sdGenerator.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/sdGenerator.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/sdGenerator.C:15:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/sdGenerator.C: In member function 'void BALL::SDGenerator::treatChains_()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:64:49: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   64 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/sdGenerator.C:992:3: note: in expansion of macro 'BALL_FOREACH_ATOM'
  992 |   BALL_FOREACH_ATOM(*system_, at_it)
      |   ^~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/sdGenerator.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/sdGenerator.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/sdGenerator.C:15:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:77:49: warning: implicitly-declared 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   77 | for (bond_iterator = (bond_container).beginBond(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/sdGenerator.C:1103:4: note: in expansion of macro 'BALL_FOREACH_ATOM_BOND'
 1103 |    BALL_FOREACH_ATOM_BOND(*first_atom, b_it)
      |    ^~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/ringAnalyser.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/sdGenerator.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/sdGenerator.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:437:15: note: because 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::RandomAccessIterator<Container, DataType, Position, Traits>::RandomAccessIterator(const BALL::RandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
  437 |   BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/sdGenerator.C:15:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:77:49: warning: implicitly-declared 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   77 | for (bond_iterator = (bond_container).beginBond(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/sdGenerator.C:1116:4: note: in expansion of macro 'BALL_FOREACH_ATOM_BOND'
 1116 |    BALL_FOREACH_ATOM_BOND(*first_atom, b_it)
      |    ^~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/ringAnalyser.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/sdGenerator.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/sdGenerator.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:437:15: note: because 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::RandomAccessIterator<Container, DataType, Position, Traits>::RandomAccessIterator(const BALL::RandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
  437 |   BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/sdGenerator.C:15:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/sdGenerator.C: In member function 'BALL::Angle BALL::SDGenerator::computeAngularSeparation_(BALL::Atom*)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:77:49: warning: implicitly-declared 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   77 | for (bond_iterator = (bond_container).beginBond(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/sdGenerator.C:1139:3: note: in expansion of macro 'BALL_FOREACH_ATOM_BOND'
 1139 |   BALL_FOREACH_ATOM_BOND(*seed, b_it)
      |   ^~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/ringAnalyser.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/sdGenerator.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/sdGenerator.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:437:15: note: because 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::RandomAccessIterator<Container, DataType, Position, Traits>::RandomAccessIterator(const BALL::RandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
  437 |   BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/sdGenerator.C:15:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/sdGenerator.C: In member function 'std::vector<BALL::Atom*> BALL::SDGenerator::sequenceSubstituents_(BALL::Atom*)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:77:49: warning: implicitly-declared 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   77 | for (bond_iterator = (bond_container).beginBond(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/sdGenerator.C:1235:3: note: in expansion of macro 'BALL_FOREACH_ATOM_BOND'
 1235 |   BALL_FOREACH_ATOM_BOND(*seed, b_it)
      |   ^~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/ringAnalyser.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/sdGenerator.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/sdGenerator.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:437:15: note: because 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::RandomAccessIterator<Container, DataType, Position, Traits>::RandomAccessIterator(const BALL::RandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
  437 |   BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/sdGenerator.C:15:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:77:49: warning: implicitly-declared 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   77 | for (bond_iterator = (bond_container).beginBond(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/sdGenerator.C:1353:6: note: in expansion of macro 'BALL_FOREACH_ATOM_BOND'
 1353 |      BALL_FOREACH_ATOM_BOND(*seed, b_it)
      |      ^~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/ringAnalyser.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/sdGenerator.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/sdGenerator.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:437:15: note: because 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::RandomAccessIterator<Container, DataType, Position, Traits>::RandomAccessIterator(const BALL::RandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
  437 |   BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/sdGenerator.C:15:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/sdGenerator.C: In member function 'void BALL::SDGenerator::assembleSD_()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:64:49: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   64 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/sdGenerator.C:1608:3: note: in expansion of macro 'BALL_FOREACH_ATOM'
 1608 |   BALL_FOREACH_ATOM(*system_, at_it)
      |   ^~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/sdGenerator.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/sdGenerator.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/sdGenerator.C:15:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:77:49: warning: implicitly-declared 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   77 | for (bond_iterator = (bond_container).beginBond(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/sdGenerator.C:1730:5: note: in expansion of macro 'BALL_FOREACH_ATOM_BOND'
 1730 |     BALL_FOREACH_ATOM_BOND(*seed_atom, b_it)
      |     ^~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/ringAnalyser.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/sdGenerator.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/sdGenerator.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:437:15: note: because 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::RandomAccessIterator<Container, DataType, Position, Traits>::RandomAccessIterator(const BALL::RandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
  437 |   BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~
[ 80%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/SESEdge.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/STRUCTURE/SESEdge.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/SESEdge.C
[ 80%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/SESFace.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/STRUCTURE/SESFace.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/SESFace.C
[ 80%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/SESVertex.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/STRUCTURE/SESVertex.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/SESVertex.C
[ 80%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/secondaryStructureProcessor.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/STRUCTURE/secondaryStructureProcessor.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/secondaryStructureProcessor.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/HBondProcessor.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/secondaryStructureProcessor.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/secondaryStructureProcessor.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/secondaryStructureProcessor.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/HBondProcessor.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/secondaryStructureProcessor.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/secondaryStructureProcessor.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/secondaryStructureProcessor.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/HBondProcessor.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/secondaryStructureProcessor.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/secondaryStructureProcessor.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/secondaryStructureProcessor.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 80%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/sideChainPlacementProcessor.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/STRUCTURE/sideChainPlacementProcessor.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/sideChainPlacementProcessor.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/kernel.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/sideChainPlacementProcessor.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/kernel.h:12,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/sideChainPlacementProcessor.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/kernel.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/sideChainPlacementProcessor.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/kernel.h:12,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/sideChainPlacementProcessor.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/kernel.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/sideChainPlacementProcessor.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/kernel.h:12,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/sideChainPlacementProcessor.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/sideChainPlacementProcessor.C: In member function 'virtual BALL::Processor::Result BALL::SideChainPlacementProcessor::operator()(BALL::AtomContainer&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/sideChainPlacementProcessor.C:362:57: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::PDBAtom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::PDBAtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::PDBAtom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::PDBAtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::PDBAtom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::PDBAtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  362 |        for ( at_it_scwrled=res_it_scwrled->beginPDBAtom();
      |                                                         ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/kernel.h:12,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/sideChainPlacementProcessor.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::PDBAtom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::PDBAtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::PDBAtom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::PDBAtomIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::PDBAtom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::PDBAtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::PDBAtom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::PDBAtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::PDBAtom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::PDBAtomIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::PDBAtom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::PDBAtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::PDBAtom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::PDBAtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::PDBAtom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::PDBAtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::PDBAtom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::PDBAtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::PDBAtom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::PDBAtomIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/sideChainPlacementProcessor.C: In member function 'virtual BALL::Processor::Result BALL::SideChainPlacementProcessor::operator()(BALL::AtomContainer&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/sideChainPlacementProcessor.C:362:57: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::PDBAtom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::PDBAtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::PDBAtom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::PDBAtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::PDBAtom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::PDBAtomIteratorTraits>&)' first required here
  362 |        for ( at_it_scwrled=res_it_scwrled->beginPDBAtom();
      |                                                         ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/sideChainPlacementProcessor.C:393:58: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::PDBAtom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::PDBAtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::PDBAtom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::PDBAtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::PDBAtom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::PDBAtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  393 |       for ( at_it_ori = to_mutate[j].first->beginPDBAtom();
      |                                                          ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/kernel.h:12,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/sideChainPlacementProcessor.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::PDBAtom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::PDBAtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::PDBAtom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::PDBAtomIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 80%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/smilesParser.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/STRUCTURE/smilesParser.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/smilesParser.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/smilesParser.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/smilesParser.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/smilesParser.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/smilesParser.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/smilesParser.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/smilesParser.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/smilesParser.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/smilesParser.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/smilesParser.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/smilesParser.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/smilesParser.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/smilesParser.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 80%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/smartsParser.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/STRUCTURE/smartsParser.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/smartsParser.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/smartsParser.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/smartsParser.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/smartsParser.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/smartsParser.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/smartsParser.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/smartsParser.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 80%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/smartsMatcher.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/STRUCTURE/smartsMatcher.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/smartsMatcher.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/ringPerceptionProcessor.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/smartsMatcher.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/ringPerceptionProcessor.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/smartsMatcher.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/ringPerceptionProcessor.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/smartsMatcher.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/ringPerceptionProcessor.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/smartsMatcher.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/ringPerceptionProcessor.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/smartsMatcher.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/ringPerceptionProcessor.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/smartsMatcher.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 80%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/solventAccessibleSurface.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/STRUCTURE/solventAccessibleSurface.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/solventAccessibleSurface.C
[ 80%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/solventExcludedSurface.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/STRUCTURE/solventExcludedSurface.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/solventExcludedSurface.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/forwardIterator.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashSet.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/circle3.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/RSEdge.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/SESEdge.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/solventExcludedSurface.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/solventExcludedSurface.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/baseIterator.h: In instantiation of 'BALL::BaseIterator<Container, DataType, Position, Traits>& BALL::BaseIterator<Container, DataType, Position, Traits>::operator=(const BALL::BaseIterator<Container, DataType, Position, Traits>&) [with Container = BALL::HashGridBox3<int>; DataType = BALL::HashGridBox3<int>; Position = unsigned int; Traits = BALL::HashGridBox3<int>::BoxIteratorTraits]':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/forwardIterator.h:63:68:   required from 'BALL::ConstForwardIterator<Container, DataType, Position, Traits>& BALL::ConstForwardIterator<Container, DataType, Position, Traits>::operator=(const BALL::ConstForwardIterator<Container, DataType, Position, Traits>&) [with Container = BALL::HashGridBox3<int>; DataType = BALL::HashGridBox3<int>; Position = unsigned int; Traits = BALL::HashGridBox3<int>::BoxIteratorTraits]'
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/solventExcludedSurface.C:1587:27:   required from here
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/baseIterator.h:111:12: warning: implicitly-declared 'BALL::HashGridBox3<int>::BoxIteratorTraits& BALL::HashGridBox3<int>::BoxIteratorTraits::operator=(const BALL::HashGridBox3<int>::BoxIteratorTraits&)' is deprecated [-Wdeprecated-copy]
  111 |    traits_ = iterator.traits_;
      |    ~~~~~~~~^~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/solventExcludedSurface.h:45,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/solventExcludedSurface.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:209:4: note: because 'BALL::HashGridBox3<int>::BoxIteratorTraits' has user-provided 'BALL::HashGridBox3<Item>::BoxIteratorTraits::BoxIteratorTraits(const BALL::HashGridBox3<Item>::BoxIteratorTraits&, bool) [with Item = int]'
  209 |    BoxIteratorTraits(const BoxIteratorTraits& traits, bool /* deep */ = true)
      |    ^~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/forwardIterator.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashSet.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/circle3.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/RSEdge.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/SESEdge.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/solventExcludedSurface.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/solventExcludedSurface.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/baseIterator.h: In instantiation of 'BALL::BaseIterator<Container, DataType, Position, Traits>& BALL::BaseIterator<Container, DataType, Position, Traits>::operator=(const BALL::BaseIterator<Container, DataType, Position, Traits>&) [with Container = BALL::HashGridBox3<unsigned int>; DataType = BALL::HashGridBox3<unsigned int>; Position = unsigned int; Traits = BALL::HashGridBox3<unsigned int>::BoxIteratorTraits]':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/forwardIterator.h:63:68:   required from 'BALL::ConstForwardIterator<Container, DataType, Position, Traits>& BALL::ConstForwardIterator<Container, DataType, Position, Traits>::operator=(const BALL::ConstForwardIterator<Container, DataType, Position, Traits>&) [with Container = BALL::HashGridBox3<unsigned int>; DataType = BALL::HashGridBox3<unsigned int>; Position = unsigned int; Traits = BALL::HashGridBox3<unsigned int>::BoxIteratorTraits]'
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/solventExcludedSurface.C:2156:27:   required from here
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/baseIterator.h:111:12: warning: implicitly-declared 'BALL::HashGridBox3<unsigned int>::BoxIteratorTraits& BALL::HashGridBox3<unsigned int>::BoxIteratorTraits::operator=(const BALL::HashGridBox3<unsigned int>::BoxIteratorTraits&)' is deprecated [-Wdeprecated-copy]
  111 |    traits_ = iterator.traits_;
      |    ~~~~~~~~^~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/solventExcludedSurface.h:45,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/solventExcludedSurface.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:209:4: note: because 'BALL::HashGridBox3<unsigned int>::BoxIteratorTraits' has user-provided 'BALL::HashGridBox3<Item>::BoxIteratorTraits::BoxIteratorTraits(const BALL::HashGridBox3<Item>::BoxIteratorTraits&, bool) [with Item = unsigned int]'
  209 |    BoxIteratorTraits(const BoxIteratorTraits& traits, bool /* deep */ = true)
      |    ^~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h: In instantiation of 'BALL::Index BALL::HashGrid3<Item>::getIndex_(const BALL::HashGridBox3<Item>&) const [with Item = int; BALL::Index = int]':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:1516:17:   required from 'bool BALL::HashGrid3<Item>::getIndices(const BALL::HashGridBox3<Item>&, BALL::Position&, BALL::Position&, BALL::Position&) const [with Item = int; BALL::Position = unsigned int]'
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:563:21:   required from 'void BALL::HashGridBox3<Item>::getIndices(BALL::Position&, BALL::Position&, BALL::Position&) [with Item = int; BALL::Position = unsigned int]'
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:206:13:   required from 'BALL::HashGridBox3<Item>::BoxIteratorTraits::BoxIteratorTraits(const BALL::HashGridBox3<Item>&) [with Item = int]'
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/baseIterator.h:190:23:   required from 'BALL::BaseIterator<Container, DataType, Position, Traits>::BaseIterator(const Container&) [with Container = BALL::HashGridBox3<int>; DataType = BALL::HashGridBox3<int>; Position = unsigned int; Traits = BALL::HashGridBox3<int>::BoxIteratorTraits]'
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/forwardIterator.h:128:67:   required from 'BALL::ConstForwardIterator<Container, DataType, Position, Traits>::ConstForwardIterator(const Container&) [with Container = BALL::HashGridBox3<int>; DataType = BALL::HashGridBox3<int>; Position = unsigned int; Traits = BALL::HashGridBox3<int>::BoxIteratorTraits]'
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/forwardIterator.h:298:20:   required from 'BALL::ForwardIterator<Container, DataType, Position, Traits>::ForwardIterator(const Container&) [with Container = BALL::HashGridBox3<int>; DataType = BALL::HashGridBox3<int>; Position = unsigned int; Traits = BALL::HashGridBox3<int>::BoxIteratorTraits]'
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/forwardIterator.h:309:19:   required from 'static BALL::ForwardIterator<Container, DataType, Position, Traits> BALL::ForwardIterator<Container, DataType, Position, Traits>::begin(const Container&) [with Container = BALL::HashGridBox3<int>; DataType = BALL::HashGridBox3<int>; Position = unsigned int; Traits = BALL::HashGridBox3<int>::BoxIteratorTraits]'
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:332:29:   required from 'BALL::HashGridBox3<Item>::BoxIterator BALL::HashGridBox3<Item>::beginBox() [with Item = int; BALL::HashGridBox3<Item>::BoxIterator = BALL::ForwardIterator<BALL::HashGridBox3<int>, BALL::HashGridBox3<int>, unsigned int, BALL::HashGridBox3<int>::BoxIteratorTraits>]'
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/solventExcludedSurface.C:1587:27:   required from here
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:1726:46: warning: comparison of integer expressions of different signedness: 'int' and 'BALL::Size' {aka 'unsigned int'} [-Wsign-compare]
 1726 |   if ((&box < &box_[0]) || (&box - &box_[0]  >= getSize()))
      |                            ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h: In instantiation of 'BALL::Index BALL::HashGrid3<Item>::getIndex_(const BALL::HashGridBox3<Item>&) const [with Item = unsigned int; BALL::Index = int]':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:1516:17:   required from 'bool BALL::HashGrid3<Item>::getIndices(const BALL::HashGridBox3<Item>&, BALL::Position&, BALL::Position&, BALL::Position&) const [with Item = unsigned int; BALL::Position = unsigned int]'
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:563:21:   required from 'void BALL::HashGridBox3<Item>::getIndices(BALL::Position&, BALL::Position&, BALL::Position&) [with Item = unsigned int; BALL::Position = unsigned int]'
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:206:13:   required from 'BALL::HashGridBox3<Item>::BoxIteratorTraits::BoxIteratorTraits(const BALL::HashGridBox3<Item>&) [with Item = unsigned int]'
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/baseIterator.h:190:23:   required from 'BALL::BaseIterator<Container, DataType, Position, Traits>::BaseIterator(const Container&) [with Container = BALL::HashGridBox3<unsigned int>; DataType = BALL::HashGridBox3<unsigned int>; Position = unsigned int; Traits = BALL::HashGridBox3<unsigned int>::BoxIteratorTraits]'
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/forwardIterator.h:128:67:   required from 'BALL::ConstForwardIterator<Container, DataType, Position, Traits>::ConstForwardIterator(const Container&) [with Container = BALL::HashGridBox3<unsigned int>; DataType = BALL::HashGridBox3<unsigned int>; Position = unsigned int; Traits = BALL::HashGridBox3<unsigned int>::BoxIteratorTraits]'
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/forwardIterator.h:298:20:   required from 'BALL::ForwardIterator<Container, DataType, Position, Traits>::ForwardIterator(const Container&) [with Container = BALL::HashGridBox3<unsigned int>; DataType = BALL::HashGridBox3<unsigned int>; Position = unsigned int; Traits = BALL::HashGridBox3<unsigned int>::BoxIteratorTraits]'
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/forwardIterator.h:309:19:   required from 'static BALL::ForwardIterator<Container, DataType, Position, Traits> BALL::ForwardIterator<Container, DataType, Position, Traits>::begin(const Container&) [with Container = BALL::HashGridBox3<unsigned int>; DataType = BALL::HashGridBox3<unsigned int>; Position = unsigned int; Traits = BALL::HashGridBox3<unsigned int>::BoxIteratorTraits]'
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:332:29:   required from 'BALL::HashGridBox3<Item>::BoxIterator BALL::HashGridBox3<Item>::beginBox() [with Item = unsigned int; BALL::HashGridBox3<Item>::BoxIterator = BALL::ForwardIterator<BALL::HashGridBox3<unsigned int>, BALL::HashGridBox3<unsigned int>, unsigned int, BALL::HashGridBox3<unsigned int>::BoxIteratorTraits>]'
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/solventExcludedSurface.C:2156:27:   required from here
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:1726:46: warning: comparison of integer expressions of different signedness: 'int' and 'BALL::Size' {aka 'unsigned int'} [-Wsign-compare]
[ 80%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/structureMapper.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/STRUCTURE/structureMapper.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/structureMapper.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chain.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chainIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/protein.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/structureMapper.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/structureMapper.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/geometricTransformations.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/structureMapper.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/structureMapper.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chain.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chainIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/protein.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/structureMapper.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/structureMapper.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/geometricTransformations.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/structureMapper.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/structureMapper.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chain.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chainIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/protein.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/structureMapper.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/structureMapper.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/geometricTransformations.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/structureMapper.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/structureMapper.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/structureMapper.C: In member function 'BALL::Size BALL::StructureMapper::countFragments_(const BALL::AtomContainer&) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/structureMapper.C:54:35: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::AtomContainer, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomContainerIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::AtomContainer, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomContainerIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::AtomContainer, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomContainerIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   54 |   for (it = ac.beginAtomContainer(); +it; ++it)
      |                                   ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/geometricTransformations.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/structureMapper.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/structureMapper.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::AtomContainer, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomContainerIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::AtomContainer; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomContainerIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/structureMapper.C: In static member function 'static BALL::Matrix4x4 BALL::StructureMapper::matchBackboneAtoms(const BALL::Residue&, const BALL::Residue&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/structureMapper.C:425:31: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  425 |   for (atom_it = r1.beginAtom(); +atom_it; ++atom_it)
      |                               ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/geometricTransformations.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/structureMapper.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/structureMapper.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/structureMapper.C:448:31: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  448 |   for (atom_it = r2.beginAtom(); +atom_it; ++atom_it)
      |                               ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/geometricTransformations.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/structureMapper.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/structureMapper.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/structureMapper.C: In member function 'std::vector<std::vector<BALL::Fragment*> >& BALL::StructureMapper::searchPattern(std::vector<BALL::Fragment*>&, BALL::AtomContainer&, double, double, double, double)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/structureMapper.C:556:38: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::AtomContainer, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomContainerIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::AtomContainer, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomContainerIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::AtomContainer, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomContainerIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  556 |   for (ac_it = ac.beginAtomContainer();
      |                                      ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/geometricTransformations.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/structureMapper.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/structureMapper.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::AtomContainer, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomContainerIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::AtomContainer; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomContainerIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::AtomContainer, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomContainerIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::AtomContainer, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomContainerIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::AtomContainer, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomContainerIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::AtomContainer, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomContainerIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::AtomContainer, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomContainerIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::AtomContainer, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomContainerIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::AtomContainer, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomContainerIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::AtomContainer; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomContainerIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/structureMapper.C: In member function 'std::vector<std::vector<BALL::Fragment*> >& BALL::StructureMapper::searchPattern(std::vector<BALL::Fragment*>&, BALL::AtomContainer&, double, double, double, double)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/structureMapper.C:556:38: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::AtomContainer, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomContainerIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::AtomContainer, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomContainerIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::AtomContainer, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomContainerIteratorTraits>&)' first required here
  556 |   for (ac_it = ac.beginAtomContainer();
      |                                      ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/structureMapper.C: In member function 'BALL::Matrix4x4 BALL::StructureMapper::mapProteins(BALL::Protein&, BALL::Protein&, std::map<BALL::String, unsigned int>&, BALL::Size&, double&, double, double, double)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/structureMapper.C:713:30: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  713 |   for(atom_it = P1.beginAtom(); +atom_it; ++atom_it)
      |                              ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/geometricTransformations.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/structureMapper.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/structureMapper.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/structureMapper.C: In member function 'BALL::Matrix4x4 BALL::StructureMapper::mapProteins(BALL::Protein&, BALL::Protein&, std::map<BALL::String, unsigned int>&, BALL::Size&, double&, double, double, double)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/structureMapper.C:713:30: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' first required here
  713 |   for(atom_it = P1.beginAtom(); +atom_it; ++atom_it)
      |                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/structureMapper.C:740:30: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  740 |   for(atom_it = P2.beginAtom(); +atom_it; ++atom_it)
      |                              ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/geometricTransformations.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/structureMapper.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/structureMapper.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/forwardIterator.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/geometricTransformations.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/structureMapper.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/structureMapper.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/baseIterator.h: In instantiation of 'BALL::BaseIterator<Container, DataType, Position, Traits>& BALL::BaseIterator<Container, DataType, Position, Traits>::operator=(const BALL::BaseIterator<Container, DataType, Position, Traits>&) [with Container = BALL::HashGridBox3<unsigned int>; DataType = BALL::HashGridBox3<unsigned int>; Position = unsigned int; Traits = BALL::HashGridBox3<unsigned int>::BoxIteratorTraits]':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/forwardIterator.h:63:68:   required from 'BALL::ConstForwardIterator<Container, DataType, Position, Traits>& BALL::ConstForwardIterator<Container, DataType, Position, Traits>::operator=(const BALL::ConstForwardIterator<Container, DataType, Position, Traits>&) [with Container = BALL::HashGridBox3<unsigned int>; DataType = BALL::HashGridBox3<unsigned int>; Position = unsigned int; Traits = BALL::HashGridBox3<unsigned int>::BoxIteratorTraits]'
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/forwardIterator.h:237:76:   required from 'BALL::ForwardIterator<Container, DataType, Position, Traits>& BALL::ForwardIterator<Container, DataType, Position, Traits>::operator=(const BALL::ForwardIterator<Container, DataType, Position, Traits>&) [with Container = BALL::HashGridBox3<unsigned int>; DataType = BALL::HashGridBox3<unsigned int>; Position = unsigned int; Traits = BALL::HashGridBox3<unsigned int>::BoxIteratorTraits]'
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/structureMapper.C:774:34:   required from here
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/baseIterator.h:111:12: warning: implicitly-declared 'BALL::HashGridBox3<unsigned int>::BoxIteratorTraits& BALL::HashGridBox3<unsigned int>::BoxIteratorTraits::operator=(const BALL::HashGridBox3<unsigned int>::BoxIteratorTraits&)' is deprecated [-Wdeprecated-copy]
  111 |    traits_ = iterator.traits_;
      |    ~~~~~~~~^~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/structureMapper.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:209:4: note: because 'BALL::HashGridBox3<unsigned int>::BoxIteratorTraits' has user-provided 'BALL::HashGridBox3<Item>::BoxIteratorTraits::BoxIteratorTraits(const BALL::HashGridBox3<Item>::BoxIteratorTraits&, bool) [with Item = unsigned int]'
  209 |    BoxIteratorTraits(const BoxIteratorTraits& traits, bool /* deep */ = true)
      |    ^~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/forwardIterator.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/geometricTransformations.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/structureMapper.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/structureMapper.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/baseIterator.h: In instantiation of 'BALL::BaseIterator<Container, DataType, Position, Traits>& BALL::BaseIterator<Container, DataType, Position, Traits>::operator=(const BALL::BaseIterator<Container, DataType, Position, Traits>&) [with Container = BALL::HashGridBox3<BALL::TVector3<unsigned int> >; DataType = BALL::HashGridBox3<BALL::TVector3<unsigned int> >; Position = unsigned int; Traits = BALL::HashGridBox3<BALL::TVector3<unsigned int> >::BoxIteratorTraits]':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/forwardIterator.h:63:68:   required from 'BALL::ConstForwardIterator<Container, DataType, Position, Traits>& BALL::ConstForwardIterator<Container, DataType, Position, Traits>::operator=(const BALL::ConstForwardIterator<Container, DataType, Position, Traits>&) [with Container = BALL::HashGridBox3<BALL::TVector3<unsigned int> >; DataType = BALL::HashGridBox3<BALL::TVector3<unsigned int> >; Position = unsigned int; Traits = BALL::HashGridBox3<BALL::TVector3<unsigned int> >::BoxIteratorTraits]'
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/forwardIterator.h:237:76:   required from 'BALL::ForwardIterator<Container, DataType, Position, Traits>& BALL::ForwardIterator<Container, DataType, Position, Traits>::operator=(const BALL::ForwardIterator<Container, DataType, Position, Traits>&) [with Container = BALL::HashGridBox3<BALL::TVector3<unsigned int> >; DataType = BALL::HashGridBox3<BALL::TVector3<unsigned int> >; Position = unsigned int; Traits = BALL::HashGridBox3<BALL::TVector3<unsigned int> >::BoxIteratorTraits]'
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/structureMapper.C:865:40:   required from here
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/baseIterator.h:111:12: warning: implicitly-declared 'BALL::HashGridBox3<BALL::TVector3<unsigned int> >::BoxIteratorTraits& BALL::HashGridBox3<BALL::TVector3<unsigned int> >::BoxIteratorTraits::operator=(const BALL::HashGridBox3<BALL::TVector3<unsigned int> >::BoxIteratorTraits&)' is deprecated [-Wdeprecated-copy]
  111 |    traits_ = iterator.traits_;
      |    ~~~~~~~~^~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/structureMapper.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:209:4: note: because 'BALL::HashGridBox3<BALL::TVector3<unsigned int> >::BoxIteratorTraits' has user-provided 'BALL::HashGridBox3<Item>::BoxIteratorTraits::BoxIteratorTraits(const BALL::HashGridBox3<Item>::BoxIteratorTraits&, bool) [with Item = BALL::TVector3<unsigned int>]'
  209 |    BoxIteratorTraits(const BoxIteratorTraits& traits, bool /* deep */ = true)
      |    ^~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h: In instantiation of 'BALL::Index BALL::HashGrid3<Item>::getIndex_(const BALL::HashGridBox3<Item>&) const [with Item = unsigned int; BALL::Index = int]':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:1516:17:   required from 'bool BALL::HashGrid3<Item>::getIndices(const BALL::HashGridBox3<Item>&, BALL::Position&, BALL::Position&, BALL::Position&) const [with Item = unsigned int; BALL::Position = unsigned int]'
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:563:21:   required from 'void BALL::HashGridBox3<Item>::getIndices(BALL::Position&, BALL::Position&, BALL::Position&) [with Item = unsigned int; BALL::Position = unsigned int]'
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:206:13:   required from 'BALL::HashGridBox3<Item>::BoxIteratorTraits::BoxIteratorTraits(const BALL::HashGridBox3<Item>&) [with Item = unsigned int]'
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/baseIterator.h:190:23:   required from 'BALL::BaseIterator<Container, DataType, Position, Traits>::BaseIterator(const Container&) [with Container = BALL::HashGridBox3<unsigned int>; DataType = BALL::HashGridBox3<unsigned int>; Position = unsigned int; Traits = BALL::HashGridBox3<unsigned int>::BoxIteratorTraits]'
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/forwardIterator.h:128:67:   required from 'BALL::ConstForwardIterator<Container, DataType, Position, Traits>::ConstForwardIterator(const Container&) [with Container = BALL::HashGridBox3<unsigned int>; DataType = BALL::HashGridBox3<unsigned int>; Position = unsigned int; Traits = BALL::HashGridBox3<unsigned int>::BoxIteratorTraits]'
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/forwardIterator.h:298:20:   required from 'BALL::ForwardIterator<Container, DataType, Position, Traits>::ForwardIterator(const Container&) [with Container = BALL::HashGridBox3<unsigned int>; DataType = BALL::HashGridBox3<unsigned int>; Position = unsigned int; Traits = BALL::HashGridBox3<unsigned int>::BoxIteratorTraits]'
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/forwardIterator.h:309:19:   required from 'static BALL::ForwardIterator<Container, DataType, Position, Traits> BALL::ForwardIterator<Container, DataType, Position, Traits>::begin(const Container&) [with Container = BALL::HashGridBox3<unsigned int>; DataType = BALL::HashGridBox3<unsigned int>; Position = unsigned int; Traits = BALL::HashGridBox3<unsigned int>::BoxIteratorTraits]'
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:332:29:   required from 'BALL::HashGridBox3<Item>::BoxIterator BALL::HashGridBox3<Item>::beginBox() [with Item = unsigned int; BALL::HashGridBox3<Item>::BoxIterator = BALL::ForwardIterator<BALL::HashGridBox3<unsigned int>, BALL::HashGridBox3<unsigned int>, unsigned int, BALL::HashGridBox3<unsigned int>::BoxIteratorTraits>]'
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/structureMapper.C:774:34:   required from here
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:1726:46: warning: comparison of integer expressions of different signedness: 'int' and 'BALL::Size' {aka 'unsigned int'} [-Wsign-compare]
 1726 |   if ((&box < &box_[0]) || (&box - &box_[0]  >= getSize()))
      |                            ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h: In instantiation of 'BALL::Index BALL::HashGrid3<Item>::getIndex_(const BALL::HashGridBox3<Item>&) const [with Item = BALL::TVector3<unsigned int>; BALL::Index = int]':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:1516:17:   required from 'bool BALL::HashGrid3<Item>::getIndices(const BALL::HashGridBox3<Item>&, BALL::Position&, BALL::Position&, BALL::Position&) const [with Item = BALL::TVector3<unsigned int>; BALL::Position = unsigned int]'
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:563:21:   required from 'void BALL::HashGridBox3<Item>::getIndices(BALL::Position&, BALL::Position&, BALL::Position&) [with Item = BALL::TVector3<unsigned int>; BALL::Position = unsigned int]'
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:206:13:   required from 'BALL::HashGridBox3<Item>::BoxIteratorTraits::BoxIteratorTraits(const BALL::HashGridBox3<Item>&) [with Item = BALL::TVector3<unsigned int>]'
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/baseIterator.h:190:23:   required from 'BALL::BaseIterator<Container, DataType, Position, Traits>::BaseIterator(const Container&) [with Container = BALL::HashGridBox3<BALL::TVector3<unsigned int> >; DataType = BALL::HashGridBox3<BALL::TVector3<unsigned int> >; Position = unsigned int; Traits = BALL::HashGridBox3<BALL::TVector3<unsigned int> >::BoxIteratorTraits]'
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/forwardIterator.h:128:67:   required from 'BALL::ConstForwardIterator<Container, DataType, Position, Traits>::ConstForwardIterator(const Container&) [with Container = BALL::HashGridBox3<BALL::TVector3<unsigned int> >; DataType = BALL::HashGridBox3<BALL::TVector3<unsigned int> >; Position = unsigned int; Traits = BALL::HashGridBox3<BALL::TVector3<unsigned int> >::BoxIteratorTraits]'
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/forwardIterator.h:298:20:   required from 'BALL::ForwardIterator<Container, DataType, Position, Traits>::ForwardIterator(const Container&) [with Container = BALL::HashGridBox3<BALL::TVector3<unsigned int> >; DataType = BALL::HashGridBox3<BALL::TVector3<unsigned int> >; Position = unsigned int; Traits = BALL::HashGridBox3<BALL::TVector3<unsigned int> >::BoxIteratorTraits]'
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/forwardIterator.h:309:19:   required from 'static BALL::ForwardIterator<Container, DataType, Position, Traits> BALL::ForwardIterator<Container, DataType, Position, Traits>::begin(const Container&) [with Container = BALL::HashGridBox3<BALL::TVector3<unsigned int> >; DataType = BALL::HashGridBox3<BALL::TVector3<unsigned int> >; Position = unsigned int; Traits = BALL::HashGridBox3<BALL::TVector3<unsigned int> >::BoxIteratorTraits]'
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:332:29:   required from 'BALL::HashGridBox3<Item>::BoxIterator BALL::HashGridBox3<Item>::beginBox() [with Item = BALL::TVector3<unsigned int>; BALL::HashGridBox3<Item>::BoxIterator = BALL::ForwardIterator<BALL::HashGridBox3<BALL::TVector3<unsigned int> >, BALL::HashGridBox3<BALL::TVector3<unsigned int> >, unsigned int, BALL::HashGridBox3<BALL::TVector3<unsigned int> >::BoxIteratorTraits>]'
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/structureMapper.C:865:40:   required from here
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:1726:46: warning: comparison of integer expressions of different signedness: 'int' and 'BALL::Size' {aka 'unsigned int'} [-Wsign-compare]
[ 80%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/surfaceProcessor.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/STRUCTURE/surfaceProcessor.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/surfaceProcessor.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/solventExcludedSurface.h:45,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/surfaceProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/surfaceProcessor.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h: In instantiation of 'BALL::Index BALL::HashGrid3<Item>::getIndex_(const BALL::HashGridBox3<Item>&) const [with Item = int; BALL::Index = int]':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:1667:20:   required from 'void BALL::HashGrid3<Item>::dump(std::ostream&, BALL::Size) const [with Item = int; std::ostream = std::basic_ostream<char>; BALL::Size = unsigned int]'
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:1625:7:   required from here
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:1726:46: warning: comparison of integer expressions of different signedness: 'int' and 'BALL::Size' {aka 'unsigned int'} [-Wsign-compare]
 1726 |   if ((&box < &box_[0]) || (&box - &box_[0]  >= getSize()))
      |                            ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~
[ 80%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/triangle.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/STRUCTURE/triangle.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/triangle.C
[ 85%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/triangleEdge.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/STRUCTURE/triangleEdge.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/triangleEdge.C
[ 85%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/trianglePoint.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/STRUCTURE/trianglePoint.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/trianglePoint.C
[ 85%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/triangulatedSAS.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/STRUCTURE/triangulatedSAS.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/triangulatedSAS.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/molecule.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/triangulatedSAS.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/triangulatedSAS.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/molecule.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/triangulatedSAS.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/triangulatedSAS.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/molecule.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/triangulatedSAS.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/triangulatedSAS.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/triangulatedSAS.C: In member function 'void BALL::SASTriangulator::onePointOutside(BALL::Index, BALL::Triangle*, BALL::TriangulatedSurface&, BALL::HashGrid3<BALL::TrianglePoint*>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/triangulatedSAS.C:426:18: warning: variable 'v2' set but not used [-Wunused-but-set-variable]
  426 |   TrianglePoint* v2;
      |                  ^~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/forwardIterator.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/triangulatedSAS.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/baseIterator.h: In instantiation of 'BALL::BaseIterator<Container, DataType, Position, Traits>& BALL::BaseIterator<Container, DataType, Position, Traits>::operator=(const BALL::BaseIterator<Container, DataType, Position, Traits>&) [with Container = BALL::HashGridBox3<BALL::TrianglePoint*>; DataType = BALL::HashGridBox3<BALL::TrianglePoint*>; Position = unsigned int; Traits = BALL::HashGridBox3<BALL::TrianglePoint*>::BoxIteratorTraits]':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/forwardIterator.h:63:68:   required from 'BALL::ConstForwardIterator<Container, DataType, Position, Traits>& BALL::ConstForwardIterator<Container, DataType, Position, Traits>::operator=(const BALL::ConstForwardIterator<Container, DataType, Position, Traits>&) [with Container = BALL::HashGridBox3<BALL::TrianglePoint*>; DataType = BALL::HashGridBox3<BALL::TrianglePoint*>; Position = unsigned int; Traits = BALL::HashGridBox3<BALL::TrianglePoint*>::BoxIteratorTraits]'
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/triangulatedSAS.C:583:27:   required from here
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/baseIterator.h:111:12: warning: implicitly-declared 'BALL::HashGridBox3<BALL::TrianglePoint*>::BoxIteratorTraits& BALL::HashGridBox3<BALL::TrianglePoint*>::BoxIteratorTraits::operator=(const BALL::HashGridBox3<BALL::TrianglePoint*>::BoxIteratorTraits&)' is deprecated [-Wdeprecated-copy]
  111 |    traits_ = iterator.traits_;
      |    ~~~~~~~~^~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/triangulatedSAS.h:49,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/triangulatedSAS.C:15:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:209:4: note: because 'BALL::HashGridBox3<BALL::TrianglePoint*>::BoxIteratorTraits' has user-provided 'BALL::HashGridBox3<Item>::BoxIteratorTraits::BoxIteratorTraits(const BALL::HashGridBox3<Item>::BoxIteratorTraits&, bool) [with Item = BALL::TrianglePoint*]'
  209 |    BoxIteratorTraits(const BoxIteratorTraits& traits, bool /* deep */ = true)
      |    ^~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h: In instantiation of 'BALL::Index BALL::HashGrid3<Item>::getIndex_(const BALL::HashGridBox3<Item>&) const [with Item = BALL::TrianglePoint*; BALL::Index = int]':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:1516:17:   required from 'bool BALL::HashGrid3<Item>::getIndices(const BALL::HashGridBox3<Item>&, BALL::Position&, BALL::Position&, BALL::Position&) const [with Item = BALL::TrianglePoint*; BALL::Position = unsigned int]'
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:563:21:   required from 'void BALL::HashGridBox3<Item>::getIndices(BALL::Position&, BALL::Position&, BALL::Position&) [with Item = BALL::TrianglePoint*; BALL::Position = unsigned int]'
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:206:13:   required from 'BALL::HashGridBox3<Item>::BoxIteratorTraits::BoxIteratorTraits(const BALL::HashGridBox3<Item>&) [with Item = BALL::TrianglePoint*]'
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/baseIterator.h:190:23:   required from 'BALL::BaseIterator<Container, DataType, Position, Traits>::BaseIterator(const Container&) [with Container = BALL::HashGridBox3<BALL::TrianglePoint*>; DataType = BALL::HashGridBox3<BALL::TrianglePoint*>; Position = unsigned int; Traits = BALL::HashGridBox3<BALL::TrianglePoint*>::BoxIteratorTraits]'
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/forwardIterator.h:128:67:   required from 'BALL::ConstForwardIterator<Container, DataType, Position, Traits>::ConstForwardIterator(const Container&) [with Container = BALL::HashGridBox3<BALL::TrianglePoint*>; DataType = BALL::HashGridBox3<BALL::TrianglePoint*>; Position = unsigned int; Traits = BALL::HashGridBox3<BALL::TrianglePoint*>::BoxIteratorTraits]'
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/forwardIterator.h:298:20:   required from 'BALL::ForwardIterator<Container, DataType, Position, Traits>::ForwardIterator(const Container&) [with Container = BALL::HashGridBox3<BALL::TrianglePoint*>; DataType = BALL::HashGridBox3<BALL::TrianglePoint*>; Position = unsigned int; Traits = BALL::HashGridBox3<BALL::TrianglePoint*>::BoxIteratorTraits]'
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/forwardIterator.h:309:19:   required from 'static BALL::ForwardIterator<Container, DataType, Position, Traits> BALL::ForwardIterator<Container, DataType, Position, Traits>::begin(const Container&) [with Container = BALL::HashGridBox3<BALL::TrianglePoint*>; DataType = BALL::HashGridBox3<BALL::TrianglePoint*>; Position = unsigned int; Traits = BALL::HashGridBox3<BALL::TrianglePoint*>::BoxIteratorTraits]'
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:332:29:   required from 'BALL::HashGridBox3<Item>::BoxIterator BALL::HashGridBox3<Item>::beginBox() [with Item = BALL::TrianglePoint*; BALL::HashGridBox3<Item>::BoxIterator = BALL::ForwardIterator<BALL::HashGridBox3<BALL::TrianglePoint*>, BALL::HashGridBox3<BALL::TrianglePoint*>, unsigned int, BALL::HashGridBox3<BALL::TrianglePoint*>::BoxIteratorTraits>]'
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/triangulatedSAS.C:583:27:   required from here
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:1726:46: warning: comparison of integer expressions of different signedness: 'int' and 'BALL::Size' {aka 'unsigned int'} [-Wsign-compare]
 1726 |   if ((&box < &box_[0]) || (&box - &box_[0]  >= getSize()))
      |                            ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~
[ 85%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/triangulatedSES.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/STRUCTURE/triangulatedSES.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/triangulatedSES.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/solventExcludedSurface.h:45,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/triangulatedSES.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h: In instantiation of 'BALL::Index BALL::HashGrid3<Item>::getIndex_(const BALL::HashGridBox3<Item>&) const [with Item = int; BALL::Index = int]':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:1667:20:   required from 'void BALL::HashGrid3<Item>::dump(std::ostream&, BALL::Size) const [with Item = int; std::ostream = std::basic_ostream<char>; BALL::Size = unsigned int]'
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:1625:7:   required from here
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:1726:46: warning: comparison of integer expressions of different signedness: 'int' and 'BALL::Size' {aka 'unsigned int'} [-Wsign-compare]
 1726 |   if ((&box < &box_[0]) || (&box - &box_[0]  >= getSize()))
      |                            ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~
[ 85%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/triangulatedSurface.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/STRUCTURE/triangulatedSurface.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/triangulatedSurface.C
[ 85%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/UCK.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/STRUCTURE/UCK.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/UCK.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/molecule.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/UCK.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/molecule.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/UCK.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/molecule.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/UCK.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/molecule.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/UCK.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/molecule.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/UCK.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/molecule.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/UCK.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 85%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/residueRotamerSet.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/STRUCTURE/residueRotamerSet.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/residueRotamerSet.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chain.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chainIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/protein.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/structureMapper.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/residueRotamerSet.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/residueRotamerSet.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/residueRotamerSet.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chain.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chainIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/protein.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/structureMapper.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/residueRotamerSet.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/residueRotamerSet.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/residueRotamerSet.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chain.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chainIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/protein.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/structureMapper.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/residueRotamerSet.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/residueRotamerSet.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/residueRotamerSet.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/residueRotamerSet.C: In member function 'BALL::Rotamer BALL::ResidueRotamerSet::getRotamer(const BALL::Residue&) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/residueRotamerSet.C:636:37: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  636 |    for (atom_it = residue.beginAtom(); +atom_it; ++atom_it)
      |                                     ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/residueRotamerSet.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/residueRotamerSet.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/residueRotamerSet.C:671:37: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  671 |    for (atom_it = residue.beginAtom(); +atom_it; ++atom_it)
      |                                     ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/residueRotamerSet.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/residueRotamerSet.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/residueRotamerSet.C:706:37: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  706 |    for (atom_it = residue.beginAtom(); +atom_it; ++atom_it)
      |                                     ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/residueRotamerSet.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/residueRotamerSet.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/residueRotamerSet.C:741:37: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  741 |    for (atom_it = residue.beginAtom(); +atom_it; ++atom_it)
      |                                     ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/residueRotamerSet.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/residueRotamerSet.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
[ 85%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/rotamerLibrary.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/STRUCTURE/rotamerLibrary.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/rotamerLibrary.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/rotamerLibrary.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/rotamerLibrary.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/rotamerLibrary.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/rotamerLibrary.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/rotamerLibrary.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/rotamerLibrary.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/rotamerLibrary.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/rotamerLibrary.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/rotamerLibrary.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/rotamerLibrary.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/rotamerLibrary.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/rotamerLibrary.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 85%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/RMSDMinimizer.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/STRUCTURE/RMSDMinimizer.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/RMSDMinimizer.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/atomBijection.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/RMSDMinimizer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/RMSDMinimizer.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/atomBijection.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/RMSDMinimizer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/RMSDMinimizer.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/atomBijection.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/RMSDMinimizer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/RMSDMinimizer.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/atomBijection.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/RMSDMinimizer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/RMSDMinimizer.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/atomBijection.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/RMSDMinimizer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/RMSDMinimizer.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/atomBijection.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/RMSDMinimizer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/RMSDMinimizer.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 85%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/smilesParserParser.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/STRUCTURE/smilesParserParser.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/STRUCTURE/smilesParserParser.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/smilesParser.h:17,
                 from source/STRUCTURE/smilesParserParser.y:3:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/smilesParser.h:13,
                 from source/STRUCTURE/smilesParserParser.y:3:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/smilesParser.h:17,
                 from source/STRUCTURE/smilesParserParser.y:3:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/smilesParser.h:13,
                 from source/STRUCTURE/smilesParserParser.y:3:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/smilesParser.h:17,
                 from source/STRUCTURE/smilesParserParser.y:3:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/smilesParser.h:13,
                 from source/STRUCTURE/smilesParserParser.y:3:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 85%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/smilesParserLexer.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/STRUCTURE/smilesParserLexer.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/STRUCTURE/smilesParserLexer.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/smilesParser.h:17,
                 from source/STRUCTURE/smilesParserLexer.l:2:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/smilesParser.h:13,
                 from source/STRUCTURE/smilesParserLexer.l:2:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/smilesParser.h:17,
                 from source/STRUCTURE/smilesParserLexer.l:2:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/smilesParser.h:13,
                 from source/STRUCTURE/smilesParserLexer.l:2:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/smilesParser.h:17,
                 from source/STRUCTURE/smilesParserLexer.l:2:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/smilesParser.h:13,
                 from source/STRUCTURE/smilesParserLexer.l:2:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/STRUCTURE/smilesParserLexer.C: At global scope:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/STRUCTURE/smilesParserLexer.C:1933:24: warning: 'void yy_fatal_error(const char*)' defined but not used [-Wunused-function]
 1933 | static void yynoreturn yy_fatal_error (const char* msg )
      |                        ^~~~~~~~~~~~~~
[ 85%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/smartsParserParser.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/STRUCTURE/smartsParserParser.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/STRUCTURE/smartsParserParser.C
source/STRUCTURE/smartsParserParser.y: In function 'int SmartsParserparse()':
source/STRUCTURE/smartsParserParser.y:369:50: warning: implicitly-declared 'constexpr BALL::SmartsParser::SPAtom::Property::Property(const BALL::SmartsParser::SPAtom::Property&)' is deprecated [-Wdeprecated-copy]
In file included from source/STRUCTURE/smartsParserParser.y:3:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/smartsParser.h:246:12: note: because 'BALL::SmartsParser::SPAtom::Property' has user-provided 'void BALL::SmartsParser::SPAtom::Property::operator=(const BALL::SmartsParser::SPAtom::Property&)'
  246 |       void operator = (const Property& rhs);
      |            ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/smartsParser.h:334:31: note:   initializing argument 1 of 'void BALL::SmartsParser::SPAtom::setProperty(BALL::SmartsParser::SPAtom::Property)'
  334 |     void setProperty(Property property);
      |                      ~~~~~~~~~^~~~~~~~
source/STRUCTURE/smartsParserParser.y:375:50: warning: implicitly-declared 'constexpr BALL::SmartsParser::SPAtom::Property::Property(const BALL::SmartsParser::SPAtom::Property&)' is deprecated [-Wdeprecated-copy]
In file included from source/STRUCTURE/smartsParserParser.y:3:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/smartsParser.h:246:12: note: because 'BALL::SmartsParser::SPAtom::Property' has user-provided 'void BALL::SmartsParser::SPAtom::Property::operator=(const BALL::SmartsParser::SPAtom::Property&)'
  246 |       void operator = (const Property& rhs);
      |            ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/smartsParser.h:334:31: note:   initializing argument 1 of 'void BALL::SmartsParser::SPAtom::setProperty(BALL::SmartsParser::SPAtom::Property)'
  334 |     void setProperty(Property property);
      |                      ~~~~~~~~~^~~~~~~~
source/STRUCTURE/smartsParserParser.y:380:54: warning: implicitly-declared 'constexpr BALL::SmartsParser::SPAtom::Property::Property(const BALL::SmartsParser::SPAtom::Property&)' is deprecated [-Wdeprecated-copy]
In file included from source/STRUCTURE/smartsParserParser.y:3:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/smartsParser.h:246:12: note: because 'BALL::SmartsParser::SPAtom::Property' has user-provided 'void BALL::SmartsParser::SPAtom::Property::operator=(const BALL::SmartsParser::SPAtom::Property&)'
  246 |       void operator = (const Property& rhs);
      |            ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/smartsParser.h:334:31: note:   initializing argument 1 of 'void BALL::SmartsParser::SPAtom::setProperty(BALL::SmartsParser::SPAtom::Property)'
  334 |     void setProperty(Property property);
      |                      ~~~~~~~~~^~~~~~~~
source/STRUCTURE/smartsParserParser.y:386:54: warning: implicitly-declared 'constexpr BALL::SmartsParser::SPAtom::Property::Property(const BALL::SmartsParser::SPAtom::Property&)' is deprecated [-Wdeprecated-copy]
In file included from source/STRUCTURE/smartsParserParser.y:3:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/smartsParser.h:246:12: note: because 'BALL::SmartsParser::SPAtom::Property' has user-provided 'void BALL::SmartsParser::SPAtom::Property::operator=(const BALL::SmartsParser::SPAtom::Property&)'
  246 |       void operator = (const Property& rhs);
      |            ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/smartsParser.h:334:31: note:   initializing argument 1 of 'void BALL::SmartsParser::SPAtom::setProperty(BALL::SmartsParser::SPAtom::Property)'
  334 |     void setProperty(Property property);
      |                      ~~~~~~~~~^~~~~~~~
source/STRUCTURE/smartsParserParser.y:472:54: warning: implicitly-declared 'constexpr BALL::SmartsParser::SPAtom::Property::Property(const BALL::SmartsParser::SPAtom::Property&)' is deprecated [-Wdeprecated-copy]
In file included from source/STRUCTURE/smartsParserParser.y:3:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/smartsParser.h:246:12: note: because 'BALL::SmartsParser::SPAtom::Property' has user-provided 'void BALL::SmartsParser::SPAtom::Property::operator=(const BALL::SmartsParser::SPAtom::Property&)'
  246 |       void operator = (const Property& rhs);
      |            ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/smartsParser.h:334:31: note:   initializing argument 1 of 'void BALL::SmartsParser::SPAtom::setProperty(BALL::SmartsParser::SPAtom::Property)'
  334 |     void setProperty(Property property);
      |                      ~~~~~~~~~^~~~~~~~
source/STRUCTURE/smartsParserParser.y:513:54: warning: implicitly-declared 'constexpr BALL::SmartsParser::SPAtom::Property::Property(const BALL::SmartsParser::SPAtom::Property&)' is deprecated [-Wdeprecated-copy]
In file included from source/STRUCTURE/smartsParserParser.y:3:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/smartsParser.h:246:12: note: because 'BALL::SmartsParser::SPAtom::Property' has user-provided 'void BALL::SmartsParser::SPAtom::Property::operator=(const BALL::SmartsParser::SPAtom::Property&)'
  246 |       void operator = (const Property& rhs);
      |            ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/smartsParser.h:334:31: note:   initializing argument 1 of 'void BALL::SmartsParser::SPAtom::setProperty(BALL::SmartsParser::SPAtom::Property)'
  334 |     void setProperty(Property property);
      |                      ~~~~~~~~~^~~~~~~~
[ 85%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/smartsParserLexer.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/STRUCTURE/smartsParserLexer.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/STRUCTURE/smartsParserLexer.C
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/STRUCTURE/smartsParserLexer.C:2023:24: warning: 'void yy_fatal_error(const char*)' defined but not used [-Wunused-function]
 2023 | static void yynoreturn yy_fatal_error (const char* msg )
      |                        ^~~~~~~~~~~~~~
[ 85%] Building CXX object CMakeFiles/BALL.dir/source/DOCKING/COMMON/conformation.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/DOCKING/COMMON/conformation.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/COMMON/conformation.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/conformation.h:8,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/COMMON/conformation.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/conformation.h:8,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/COMMON/conformation.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/conformation.h:8,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/COMMON/conformation.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/conformation.h:8,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/COMMON/conformation.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/conformation.h:8,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/COMMON/conformation.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/conformation.h:8,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/COMMON/conformation.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 85%] Building CXX object CMakeFiles/BALL.dir/source/DOCKING/COMMON/constraints.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/DOCKING/COMMON/constraints.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/COMMON/constraints.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/constraints.h:22,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/COMMON/constraints.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/constraints.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/COMMON/constraints.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/constraints.h:22,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/COMMON/constraints.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/constraints.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/COMMON/constraints.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/constraints.h:22,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/COMMON/constraints.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/constraints.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/COMMON/constraints.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 85%] Building CXX object CMakeFiles/BALL.dir/source/DOCKING/COMMON/conformationSet.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/DOCKING/COMMON/conformationSet.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/COMMON/conformationSet.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/conformationSet.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/COMMON/conformationSet.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/conformationSet.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/COMMON/conformationSet.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/conformationSet.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/COMMON/conformationSet.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/conformationSet.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/COMMON/conformationSet.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/conformationSet.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/COMMON/conformationSet.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/conformationSet.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/COMMON/conformationSet.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 85%] Building CXX object CMakeFiles/BALL.dir/source/DOCKING/COMMON/dockingAlgorithm.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/DOCKING/COMMON/dockingAlgorithm.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/COMMON/dockingAlgorithm.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/dockingAlgorithm.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/COMMON/dockingAlgorithm.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/dockingAlgorithm.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/COMMON/dockingAlgorithm.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/dockingAlgorithm.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/COMMON/dockingAlgorithm.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/dockingAlgorithm.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/COMMON/dockingAlgorithm.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/dockingAlgorithm.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/COMMON/dockingAlgorithm.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/dockingAlgorithm.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/COMMON/dockingAlgorithm.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/COMMON/dockingAlgorithm.C: In member function 'virtual double BALL::DockingAlgorithm::dockLigand(BALL::AtomContainer&, bool)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/COMMON/dockingAlgorithm.C:304:53: warning: unused parameter 'ligand' [-Wunused-parameter]
  304 |  double DockingAlgorithm::dockLigand(AtomContainer& ligand, bool verbose)
      |                                      ~~~~~~~~~~~~~~~^~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/COMMON/dockingAlgorithm.C:304:66: warning: unused parameter 'verbose' [-Wunused-parameter]
  304 |  double DockingAlgorithm::dockLigand(AtomContainer& ligand, bool verbose)
      |                                                             ~~~~~^~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/COMMON/dockingAlgorithm.C: In member function 'void BALL::DockingAlgorithm::processMultiMoleculeFile(std::string, std::string, double, std::vector<double>*, BALL::String, BALL::String)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/COMMON/dockingAlgorithm.C:549:44: warning: catching polymorphic type 'class BALL::Exception::GeneralException' by value [-Wcatch-value=]
  549 |    catch(BALL::Exception::GeneralException e)
      |                                            ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/COMMON/dockingAlgorithm.C: In static member function 'static BALL::Matrix4x4 BALL::DockingAlgorithm::mapCompounds(const BALL::AtomContainer&, const BALL::AtomContainer&, BALL::Size&, double&, double, double, double)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/COMMON/dockingAlgorithm.C:655:31: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  655 |   for (atom_it = S1.beginAtom(); +atom_it; ++atom_it)
      |                               ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/dockingAlgorithm.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/COMMON/dockingAlgorithm.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/COMMON/dockingAlgorithm.C:680:31: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  680 |   for (atom_it = S2.beginAtom(); +atom_it; ++atom_it)
      |                               ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/dockingAlgorithm.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/COMMON/dockingAlgorithm.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/forwardIterator.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashSet.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SYSTEM/file.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/paramFile.h:8,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:22,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/dockingAlgorithm.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/COMMON/dockingAlgorithm.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/baseIterator.h: In instantiation of 'BALL::BaseIterator<Container, DataType, Position, Traits>& BALL::BaseIterator<Container, DataType, Position, Traits>::operator=(const BALL::BaseIterator<Container, DataType, Position, Traits>&) [with Container = BALL::HashGridBox3<unsigned int>; DataType = BALL::HashGridBox3<unsigned int>; Position = unsigned int; Traits = BALL::HashGridBox3<unsigned int>::BoxIteratorTraits]':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/forwardIterator.h:63:68:   required from 'BALL::ConstForwardIterator<Container, DataType, Position, Traits>& BALL::ConstForwardIterator<Container, DataType, Position, Traits>::operator=(const BALL::ConstForwardIterator<Container, DataType, Position, Traits>&) [with Container = BALL::HashGridBox3<unsigned int>; DataType = BALL::HashGridBox3<unsigned int>; Position = unsigned int; Traits = BALL::HashGridBox3<unsigned int>::BoxIteratorTraits]'
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/forwardIterator.h:237:76:   required from 'BALL::ForwardIterator<Container, DataType, Position, Traits>& BALL::ForwardIterator<Container, DataType, Position, Traits>::operator=(const BALL::ForwardIterator<Container, DataType, Position, Traits>&) [with Container = BALL::HashGridBox3<unsigned int>; DataType = BALL::HashGridBox3<unsigned int>; Position = unsigned int; Traits = BALL::HashGridBox3<unsigned int>::BoxIteratorTraits]'
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/COMMON/dockingAlgorithm.C:713:36:   required from here
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/baseIterator.h:111:12: warning: implicitly-declared 'BALL::HashGridBox3<unsigned int>::BoxIteratorTraits& BALL::HashGridBox3<unsigned int>::BoxIteratorTraits::operator=(const BALL::HashGridBox3<unsigned int>::BoxIteratorTraits&)' is deprecated [-Wdeprecated-copy]
  111 |    traits_ = iterator.traits_;
      |    ~~~~~~~~^~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/constraints.h:26,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/dockingAlgorithm.h:30,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/COMMON/dockingAlgorithm.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:209:4: note: because 'BALL::HashGridBox3<unsigned int>::BoxIteratorTraits' has user-provided 'BALL::HashGridBox3<Item>::BoxIteratorTraits::BoxIteratorTraits(const BALL::HashGridBox3<Item>::BoxIteratorTraits&, bool) [with Item = unsigned int]'
  209 |    BoxIteratorTraits(const BoxIteratorTraits& traits, bool /* deep */ = true)
      |    ^~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/forwardIterator.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashSet.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SYSTEM/file.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/paramFile.h:8,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:22,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/dockingAlgorithm.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/COMMON/dockingAlgorithm.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/baseIterator.h: In instantiation of 'BALL::BaseIterator<Container, DataType, Position, Traits>& BALL::BaseIterator<Container, DataType, Position, Traits>::operator=(const BALL::BaseIterator<Container, DataType, Position, Traits>&) [with Container = BALL::HashGridBox3<BALL::TVector3<unsigned int> >; DataType = BALL::HashGridBox3<BALL::TVector3<unsigned int> >; Position = unsigned int; Traits = BALL::HashGridBox3<BALL::TVector3<unsigned int> >::BoxIteratorTraits]':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/forwardIterator.h:63:68:   required from 'BALL::ConstForwardIterator<Container, DataType, Position, Traits>& BALL::ConstForwardIterator<Container, DataType, Position, Traits>::operator=(const BALL::ConstForwardIterator<Container, DataType, Position, Traits>&) [with Container = BALL::HashGridBox3<BALL::TVector3<unsigned int> >; DataType = BALL::HashGridBox3<BALL::TVector3<unsigned int> >; Position = unsigned int; Traits = BALL::HashGridBox3<BALL::TVector3<unsigned int> >::BoxIteratorTraits]'
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/forwardIterator.h:237:76:   required from 'BALL::ForwardIterator<Container, DataType, Position, Traits>& BALL::ForwardIterator<Container, DataType, Position, Traits>::operator=(const BALL::ForwardIterator<Container, DataType, Position, Traits>&) [with Container = BALL::HashGridBox3<BALL::TVector3<unsigned int> >; DataType = BALL::HashGridBox3<BALL::TVector3<unsigned int> >; Position = unsigned int; Traits = BALL::HashGridBox3<BALL::TVector3<unsigned int> >::BoxIteratorTraits]'
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/COMMON/dockingAlgorithm.C:798:38:   required from here
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/baseIterator.h:111:12: warning: implicitly-declared 'BALL::HashGridBox3<BALL::TVector3<unsigned int> >::BoxIteratorTraits& BALL::HashGridBox3<BALL::TVector3<unsigned int> >::BoxIteratorTraits::operator=(const BALL::HashGridBox3<BALL::TVector3<unsigned int> >::BoxIteratorTraits&)' is deprecated [-Wdeprecated-copy]
  111 |    traits_ = iterator.traits_;
      |    ~~~~~~~~^~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/constraints.h:26,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/dockingAlgorithm.h:30,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/COMMON/dockingAlgorithm.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:209:4: note: because 'BALL::HashGridBox3<BALL::TVector3<unsigned int> >::BoxIteratorTraits' has user-provided 'BALL::HashGridBox3<Item>::BoxIteratorTraits::BoxIteratorTraits(const BALL::HashGridBox3<Item>::BoxIteratorTraits&, bool) [with Item = BALL::TVector3<unsigned int>]'
  209 |    BoxIteratorTraits(const BoxIteratorTraits& traits, bool /* deep */ = true)
      |    ^~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h: In instantiation of 'BALL::Index BALL::HashGrid3<Item>::getIndex_(const BALL::HashGridBox3<Item>&) const [with Item = unsigned int; BALL::Index = int]':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:1516:17:   required from 'bool BALL::HashGrid3<Item>::getIndices(const BALL::HashGridBox3<Item>&, BALL::Position&, BALL::Position&, BALL::Position&) const [with Item = unsigned int; BALL::Position = unsigned int]'
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:563:21:   required from 'void BALL::HashGridBox3<Item>::getIndices(BALL::Position&, BALL::Position&, BALL::Position&) [with Item = unsigned int; BALL::Position = unsigned int]'
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:206:13:   required from 'BALL::HashGridBox3<Item>::BoxIteratorTraits::BoxIteratorTraits(const BALL::HashGridBox3<Item>&) [with Item = unsigned int]'
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/baseIterator.h:190:23:   required from 'BALL::BaseIterator<Container, DataType, Position, Traits>::BaseIterator(const Container&) [with Container = BALL::HashGridBox3<unsigned int>; DataType = BALL::HashGridBox3<unsigned int>; Position = unsigned int; Traits = BALL::HashGridBox3<unsigned int>::BoxIteratorTraits]'
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/forwardIterator.h:128:67:   required from 'BALL::ConstForwardIterator<Container, DataType, Position, Traits>::ConstForwardIterator(const Container&) [with Container = BALL::HashGridBox3<unsigned int>; DataType = BALL::HashGridBox3<unsigned int>; Position = unsigned int; Traits = BALL::HashGridBox3<unsigned int>::BoxIteratorTraits]'
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/forwardIterator.h:298:20:   required from 'BALL::ForwardIterator<Container, DataType, Position, Traits>::ForwardIterator(const Container&) [with Container = BALL::HashGridBox3<unsigned int>; DataType = BALL::HashGridBox3<unsigned int>; Position = unsigned int; Traits = BALL::HashGridBox3<unsigned int>::BoxIteratorTraits]'
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/forwardIterator.h:309:19:   required from 'static BALL::ForwardIterator<Container, DataType, Position, Traits> BALL::ForwardIterator<Container, DataType, Position, Traits>::begin(const Container&) [with Container = BALL::HashGridBox3<unsigned int>; DataType = BALL::HashGridBox3<unsigned int>; Position = unsigned int; Traits = BALL::HashGridBox3<unsigned int>::BoxIteratorTraits]'
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:332:29:   required from 'BALL::HashGridBox3<Item>::BoxIterator BALL::HashGridBox3<Item>::beginBox() [with Item = unsigned int; BALL::HashGridBox3<Item>::BoxIterator = BALL::ForwardIterator<BALL::HashGridBox3<unsigned int>, BALL::HashGridBox3<unsigned int>, unsigned int, BALL::HashGridBox3<unsigned int>::BoxIteratorTraits>]'
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/COMMON/dockingAlgorithm.C:713:36:   required from here
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:1726:46: warning: comparison of integer expressions of different signedness: 'int' and 'BALL::Size' {aka 'unsigned int'} [-Wsign-compare]
 1726 |   if ((&box < &box_[0]) || (&box - &box_[0]  >= getSize()))
      |                            ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h: In instantiation of 'BALL::Index BALL::HashGrid3<Item>::getIndex_(const BALL::HashGridBox3<Item>&) const [with Item = BALL::TVector3<unsigned int>; BALL::Index = int]':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:1516:17:   required from 'bool BALL::HashGrid3<Item>::getIndices(const BALL::HashGridBox3<Item>&, BALL::Position&, BALL::Position&, BALL::Position&) const [with Item = BALL::TVector3<unsigned int>; BALL::Position = unsigned int]'
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:563:21:   required from 'void BALL::HashGridBox3<Item>::getIndices(BALL::Position&, BALL::Position&, BALL::Position&) [with Item = BALL::TVector3<unsigned int>; BALL::Position = unsigned int]'
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:206:13:   required from 'BALL::HashGridBox3<Item>::BoxIteratorTraits::BoxIteratorTraits(const BALL::HashGridBox3<Item>&) [with Item = BALL::TVector3<unsigned int>]'
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/baseIterator.h:190:23:   required from 'BALL::BaseIterator<Container, DataType, Position, Traits>::BaseIterator(const Container&) [with Container = BALL::HashGridBox3<BALL::TVector3<unsigned int> >; DataType = BALL::HashGridBox3<BALL::TVector3<unsigned int> >; Position = unsigned int; Traits = BALL::HashGridBox3<BALL::TVector3<unsigned int> >::BoxIteratorTraits]'
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/forwardIterator.h:128:67:   required from 'BALL::ConstForwardIterator<Container, DataType, Position, Traits>::ConstForwardIterator(const Container&) [with Container = BALL::HashGridBox3<BALL::TVector3<unsigned int> >; DataType = BALL::HashGridBox3<BALL::TVector3<unsigned int> >; Position = unsigned int; Traits = BALL::HashGridBox3<BALL::TVector3<unsigned int> >::BoxIteratorTraits]'
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/forwardIterator.h:298:20:   required from 'BALL::ForwardIterator<Container, DataType, Position, Traits>::ForwardIterator(const Container&) [with Container = BALL::HashGridBox3<BALL::TVector3<unsigned int> >; DataType = BALL::HashGridBox3<BALL::TVector3<unsigned int> >; Position = unsigned int; Traits = BALL::HashGridBox3<BALL::TVector3<unsigned int> >::BoxIteratorTraits]'
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/forwardIterator.h:309:19:   required from 'static BALL::ForwardIterator<Container, DataType, Position, Traits> BALL::ForwardIterator<Container, DataType, Position, Traits>::begin(const Container&) [with Container = BALL::HashGridBox3<BALL::TVector3<unsigned int> >; DataType = BALL::HashGridBox3<BALL::TVector3<unsigned int> >; Position = unsigned int; Traits = BALL::HashGridBox3<BALL::TVector3<unsigned int> >::BoxIteratorTraits]'
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:332:29:   required from 'BALL::HashGridBox3<Item>::BoxIterator BALL::HashGridBox3<Item>::beginBox() [with Item = BALL::TVector3<unsigned int>; BALL::HashGridBox3<Item>::BoxIterator = BALL::ForwardIterator<BALL::HashGridBox3<BALL::TVector3<unsigned int> >, BALL::HashGridBox3<BALL::TVector3<unsigned int> >, unsigned int, BALL::HashGridBox3<BALL::TVector3<unsigned int> >::BoxIteratorTraits>]'
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/COMMON/dockingAlgorithm.C:798:38:   required from here
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:1726:46: warning: comparison of integer expressions of different signedness: 'int' and 'BALL::Size' {aka 'unsigned int'} [-Wsign-compare]
[ 85%] Building CXX object CMakeFiles/BALL.dir/source/DOCKING/COMMON/dockResult.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/DOCKING/COMMON/dockResult.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/COMMON/dockResult.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/secondaryStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBdefs.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/COMMON/dockResult.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/COMMON/dockResult.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/secondaryStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBdefs.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/COMMON/dockResult.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/COMMON/dockResult.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/secondaryStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBdefs.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/COMMON/dockResult.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/COMMON/dockResult.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/COMMON/dockResult.C: In member function 'bool BALL::DockResult::readDockResult(std::istream&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/COMMON/dockResult.C:402:24: warning: catching polymorphic type 'class BALL::Exception::InvalidFormat' by value [-Wcatch-value=]
  402 |      catch (Exception::InvalidFormat)
      |                        ^~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/COMMON/dockResult.C:419:24: warning: catching polymorphic type 'class BALL::Exception::InvalidFormat' by value [-Wcatch-value=]
  419 |      catch (Exception::InvalidFormat)
      |                        ^~~~~~~~~~~~~
[ 85%] Building CXX object CMakeFiles/BALL.dir/source/DOCKING/COMMON/flexDefinition.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/DOCKING/COMMON/flexDefinition.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/COMMON/flexDefinition.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chain.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chainIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/protein.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/flexDefinition.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/COMMON/flexDefinition.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chain.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chainIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/protein.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/flexDefinition.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/COMMON/flexDefinition.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chain.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chainIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/protein.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/flexDefinition.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/COMMON/flexDefinition.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chain.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chainIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/protein.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/flexDefinition.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/COMMON/flexDefinition.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chain.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chainIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/protein.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/flexDefinition.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/COMMON/flexDefinition.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chain.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chainIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/protein.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/flexDefinition.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/COMMON/flexDefinition.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 85%] Building CXX object CMakeFiles/BALL.dir/source/DOCKING/COMMON/flexibleMolecule.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/DOCKING/COMMON/flexibleMolecule.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/COMMON/flexibleMolecule.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/molecule.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/flexibleMolecule.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/COMMON/flexibleMolecule.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/molecule.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/flexibleMolecule.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/COMMON/flexibleMolecule.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/molecule.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/flexibleMolecule.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/COMMON/flexibleMolecule.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/molecule.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/flexibleMolecule.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/COMMON/flexibleMolecule.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/molecule.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/flexibleMolecule.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/COMMON/flexibleMolecule.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/molecule.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/flexibleMolecule.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/COMMON/flexibleMolecule.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 85%] Building CXX object CMakeFiles/BALL.dir/source/DOCKING/COMMON/gridAnalysis.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/DOCKING/COMMON/gridAnalysis.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/COMMON/gridAnalysis.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/gridAnalysis.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/COMMON/gridAnalysis.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/gridAnalysis.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/COMMON/gridAnalysis.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/gridAnalysis.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/COMMON/gridAnalysis.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/gridAnalysis.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/COMMON/gridAnalysis.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/gridAnalysis.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/COMMON/gridAnalysis.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/gridAnalysis.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/COMMON/gridAnalysis.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 85%] Building CXX object CMakeFiles/BALL.dir/source/DOCKING/COMMON/poseClustering.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/DOCKING/COMMON/poseClustering.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/COMMON/poseClustering.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/conformationSet.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/poseClustering.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/COMMON/poseClustering.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/poseClustering.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/COMMON/poseClustering.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/conformationSet.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/poseClustering.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/COMMON/poseClustering.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/poseClustering.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/COMMON/poseClustering.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/conformationSet.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/poseClustering.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/COMMON/poseClustering.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/poseClustering.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/COMMON/poseClustering.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/COMMON/poseClustering.C: In member function 'bool BALL::PoseClustering::nearestNeighborChainCompute_()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/COMMON/poseClustering.C:927:8: warning: unused variable 'run_parallel' [-Wunused-variable]
  927 |   bool run_parallel = options.getBool(PoseClustering::Option::RUN_PARALLEL);
      |        ^~~~~~~~~~~~
[ 85%] Building CXX object CMakeFiles/BALL.dir/source/DOCKING/COMMON/receptor.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/DOCKING/COMMON/receptor.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/COMMON/receptor.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chain.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chainIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/protein.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/receptor.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/COMMON/receptor.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chain.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chainIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/protein.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/receptor.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/COMMON/receptor.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chain.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chainIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/protein.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/receptor.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/COMMON/receptor.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chain.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chainIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/protein.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/receptor.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/COMMON/receptor.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chain.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chainIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/protein.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/receptor.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/COMMON/receptor.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chain.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chainIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/protein.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/receptor.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/COMMON/receptor.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 85%] Building CXX object CMakeFiles/BALL.dir/source/DOCKING/COMMON/result.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/DOCKING/COMMON/result.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/COMMON/result.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chain.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chainIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/protein.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/receptor.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/result.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/COMMON/result.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chain.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chainIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/protein.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/receptor.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/result.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/COMMON/result.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chain.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chainIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/protein.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/receptor.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/result.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/COMMON/result.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chain.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chainIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/protein.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/receptor.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/result.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/COMMON/result.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chain.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chainIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/protein.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/receptor.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/result.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/COMMON/result.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chain.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chainIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/protein.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/receptor.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/result.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/COMMON/result.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 90%] Building CXX object CMakeFiles/BALL.dir/source/DOCKING/COMMON/sideChainOptimizer.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/DOCKING/COMMON/sideChainOptimizer.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/COMMON/sideChainOptimizer.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/sideChainOptimizer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/COMMON/sideChainOptimizer.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/sideChainOptimizer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/COMMON/sideChainOptimizer.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/sideChainOptimizer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/COMMON/sideChainOptimizer.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/sideChainOptimizer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/COMMON/sideChainOptimizer.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/sideChainOptimizer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/COMMON/sideChainOptimizer.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/sideChainOptimizer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/COMMON/sideChainOptimizer.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 90%] Building CXX object CMakeFiles/BALL.dir/source/DOCKING/COMMON/staticLigandFragment.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/DOCKING/COMMON/staticLigandFragment.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/COMMON/staticLigandFragment.C
[ 90%] Building CXX object CMakeFiles/BALL.dir/source/DOCKING/COMMON/structurePreparer.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/DOCKING/COMMON/structurePreparer.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/COMMON/structurePreparer.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/structurePreparer.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/COMMON/structurePreparer.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/structurePreparer.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/COMMON/structurePreparer.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/structurePreparer.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/COMMON/structurePreparer.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/structurePreparer.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/COMMON/structurePreparer.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/structurePreparer.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/COMMON/structurePreparer.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/structurePreparer.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/COMMON/structurePreparer.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/structurePreparer.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/COMMON/structurePreparer.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94ParametersBase::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:43:3: note: in expansion of macro 'BALL_CREATE'
   43 |   BALL_CREATE(MMFF94ParametersBase)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/COMMON/structurePreparer.C:15:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/structurePreparer.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/COMMON/structurePreparer.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:3: note: in expansion of macro 'BALL_CREATE'
  217 |   BALL_CREATE(MMFF94StretchParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/COMMON/structurePreparer.C:15:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:226:34: note: because 'BALL::MMFF94StretchParameters' has user-provided 'const BALL::MMFF94StretchParameters& BALL::MMFF94StretchParameters::operator=(const BALL::MMFF94StretchParameters&)'
  226 |   const MMFF94StretchParameters& operator = (const MMFF94StretchParameters& param)
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:185:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  185 |  class BALL_EXPORT MMFF94StretchParameters:
      |                    ^~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/structurePreparer.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/COMMON/structurePreparer.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:3: note: in expansion of macro 'BALL_CREATE'
  217 |   BALL_CREATE(MMFF94StretchParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94BendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:3: note: in expansion of macro 'BALL_CREATE'
  271 |   BALL_CREATE(MMFF94BendParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/COMMON/structurePreparer.C:15:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:280:31: note: because 'BALL::MMFF94BendParameters' has user-provided 'const BALL::MMFF94BendParameters& BALL::MMFF94BendParameters::operator=(const BALL::MMFF94BendParameters&)'
  280 |   const MMFF94BendParameters& operator = (const MMFF94BendParameters& param)
      |                               ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:263:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  263 |  class BALL_EXPORT MMFF94BendParameters
      |                    ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/structurePreparer.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/COMMON/structurePreparer.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94BendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:3: note: in expansion of macro 'BALL_CREATE'
  271 |   BALL_CREATE(MMFF94BendParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:3: note: in expansion of macro 'BALL_CREATE'
  318 |   BALL_CREATE(MMFF94StretchBendParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/COMMON/structurePreparer.C:15:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:327:38: note: because 'BALL::MMFF94StretchBendParameters' has user-provided 'const BALL::MMFF94StretchBendParameters& BALL::MMFF94StretchBendParameters::operator=(const BALL::MMFF94StretchBendParameters&)'
  327 |   const MMFF94StretchBendParameters& operator = (const MMFF94StretchBendParameters& param)
      |                                      ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:310:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  310 |  class BALL_EXPORT MMFF94StretchBendParameters
      |                    ^~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/structurePreparer.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/COMMON/structurePreparer.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:3: note: in expansion of macro 'BALL_CREATE'
  318 |   BALL_CREATE(MMFF94StretchBendParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:3: note: in expansion of macro 'BALL_CREATE'
  374 |   BALL_CREATE(MMFF94TorsionParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/COMMON/structurePreparer.C:15:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:383:34: note: because 'BALL::MMFF94TorsionParameters' has user-provided 'const BALL::MMFF94TorsionParameters& BALL::MMFF94TorsionParameters::operator=(const BALL::MMFF94TorsionParameters&)'
  383 |   const MMFF94TorsionParameters& operator = (const MMFF94TorsionParameters& param)
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:366:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  366 |  class BALL_EXPORT MMFF94TorsionParameters
      |                    ^~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/structurePreparer.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/COMMON/structurePreparer.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:3: note: in expansion of macro 'BALL_CREATE'
  374 |   BALL_CREATE(MMFF94TorsionParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:3: note: in expansion of macro 'BALL_CREATE'
  422 |   BALL_CREATE(MMFF94PlaneParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/COMMON/structurePreparer.C:15:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:431:32: note: because 'BALL::MMFF94PlaneParameters' has user-provided 'const BALL::MMFF94PlaneParameters& BALL::MMFF94PlaneParameters::operator=(const BALL::MMFF94PlaneParameters&)'
  431 |   const MMFF94PlaneParameters& operator = (const MMFF94PlaneParameters& param)
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:414:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  414 |  class BALL_EXPORT MMFF94PlaneParameters
      |                    ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/structurePreparer.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/COMMON/structurePreparer.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:3: note: in expansion of macro 'BALL_CREATE'
  422 |   BALL_CREATE(MMFF94PlaneParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:3: note: in expansion of macro 'BALL_CREATE'
  473 |   BALL_CREATE(MMFF94VDWParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/COMMON/structurePreparer.C:15:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:482:30: note: because 'BALL::MMFF94VDWParameters' has user-provided 'const BALL::MMFF94VDWParameters& BALL::MMFF94VDWParameters::operator=(const BALL::MMFF94VDWParameters&)'
  482 |   const MMFF94VDWParameters& operator = (const MMFF94VDWParameters& param)
      |                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:458:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  458 |  class BALL_EXPORT MMFF94VDWParameters
      |                    ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/structurePreparer.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/COMMON/structurePreparer.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:3: note: in expansion of macro 'BALL_CREATE'
  473 |   BALL_CREATE(MMFF94VDWParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94ESParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:3: note: in expansion of macro 'BALL_CREATE'
  530 |   BALL_CREATE(MMFF94ESParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/COMMON/structurePreparer.C:15:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:539:29: note: because 'BALL::MMFF94ESParameters' has user-provided 'const BALL::MMFF94ESParameters& BALL::MMFF94ESParameters::operator=(const BALL::MMFF94ESParameters&)'
  539 |   const MMFF94ESParameters& operator = (const MMFF94ESParameters& param)
      |                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:525:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  525 |  class BALL_EXPORT MMFF94ESParameters
      |                    ^~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/structurePreparer.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/COMMON/structurePreparer.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94ESParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:3: note: in expansion of macro 'BALL_CREATE'
  530 |   BALL_CREATE(MMFF94ESParameters)
      |   ^~~~~~~~~~~
[ 90%] Building CXX object CMakeFiles/BALL.dir/source/DOCKING/GENETICDOCK/dockProblem.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/DOCKING/GENETICDOCK/dockProblem.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/GENETICDOCK/dockProblem.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/molecule.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/GENETICDOCK/dockProblem.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/simpleBox3.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/HINFile.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/GENETICDOCK/dockProblem.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/molecule.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/GENETICDOCK/dockProblem.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/simpleBox3.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/HINFile.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/GENETICDOCK/dockProblem.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/molecule.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/GENETICDOCK/dockProblem.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/simpleBox3.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/HINFile.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/GENETICDOCK/dockProblem.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 90%] Building CXX object CMakeFiles/BALL.dir/source/DOCKING/GENETICDOCK/evolutionaryDocking.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/DOCKING/GENETICDOCK/evolutionaryDocking.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/GENETICDOCK/evolutionaryDocking.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/GENETICDOCK/evolutionaryDocking.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/GENETICDOCK/evolutionaryDocking.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/regularData3D.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/GENETICDOCK/evolutionaryDocking.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/GENETICDOCK/evolutionaryDocking.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/GENETICDOCK/evolutionaryDocking.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/GENETICDOCK/evolutionaryDocking.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/regularData3D.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/GENETICDOCK/evolutionaryDocking.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/GENETICDOCK/evolutionaryDocking.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/GENETICDOCK/evolutionaryDocking.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/GENETICDOCK/evolutionaryDocking.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/regularData3D.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/GENETICDOCK/evolutionaryDocking.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/GENETICDOCK/evolutionaryDocking.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/rtti.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/regularData3D.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/GENETICDOCK/evolutionaryDocking.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/GENETICDOCK/evolutionaryDocking.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94ParametersBase::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:43:3: note: in expansion of macro 'BALL_CREATE'
   43 |   BALL_CREATE(MMFF94ParametersBase)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/gridedPLP.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/GENETICDOCK/evolutionaryDocking.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/rtti.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/regularData3D.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/GENETICDOCK/evolutionaryDocking.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/GENETICDOCK/evolutionaryDocking.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:3: note: in expansion of macro 'BALL_CREATE'
  217 |   BALL_CREATE(MMFF94StretchParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/gridedPLP.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/GENETICDOCK/evolutionaryDocking.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:226:34: note: because 'BALL::MMFF94StretchParameters' has user-provided 'const BALL::MMFF94StretchParameters& BALL::MMFF94StretchParameters::operator=(const BALL::MMFF94StretchParameters&)'
  226 |   const MMFF94StretchParameters& operator = (const MMFF94StretchParameters& param)
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:185:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  185 |  class BALL_EXPORT MMFF94StretchParameters:
      |                    ^~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/rtti.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/regularData3D.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/GENETICDOCK/evolutionaryDocking.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/GENETICDOCK/evolutionaryDocking.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:3: note: in expansion of macro 'BALL_CREATE'
  217 |   BALL_CREATE(MMFF94StretchParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94BendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:3: note: in expansion of macro 'BALL_CREATE'
  271 |   BALL_CREATE(MMFF94BendParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/gridedPLP.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/GENETICDOCK/evolutionaryDocking.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:280:31: note: because 'BALL::MMFF94BendParameters' has user-provided 'const BALL::MMFF94BendParameters& BALL::MMFF94BendParameters::operator=(const BALL::MMFF94BendParameters&)'
  280 |   const MMFF94BendParameters& operator = (const MMFF94BendParameters& param)
      |                               ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:263:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  263 |  class BALL_EXPORT MMFF94BendParameters
      |                    ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/rtti.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/regularData3D.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/GENETICDOCK/evolutionaryDocking.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/GENETICDOCK/evolutionaryDocking.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94BendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:3: note: in expansion of macro 'BALL_CREATE'
  271 |   BALL_CREATE(MMFF94BendParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:3: note: in expansion of macro 'BALL_CREATE'
  318 |   BALL_CREATE(MMFF94StretchBendParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/gridedPLP.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/GENETICDOCK/evolutionaryDocking.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:327:38: note: because 'BALL::MMFF94StretchBendParameters' has user-provided 'const BALL::MMFF94StretchBendParameters& BALL::MMFF94StretchBendParameters::operator=(const BALL::MMFF94StretchBendParameters&)'
  327 |   const MMFF94StretchBendParameters& operator = (const MMFF94StretchBendParameters& param)
      |                                      ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:310:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  310 |  class BALL_EXPORT MMFF94StretchBendParameters
      |                    ^~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/rtti.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/regularData3D.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/GENETICDOCK/evolutionaryDocking.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/GENETICDOCK/evolutionaryDocking.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:3: note: in expansion of macro 'BALL_CREATE'
  318 |   BALL_CREATE(MMFF94StretchBendParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:3: note: in expansion of macro 'BALL_CREATE'
  374 |   BALL_CREATE(MMFF94TorsionParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/gridedPLP.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/GENETICDOCK/evolutionaryDocking.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:383:34: note: because 'BALL::MMFF94TorsionParameters' has user-provided 'const BALL::MMFF94TorsionParameters& BALL::MMFF94TorsionParameters::operator=(const BALL::MMFF94TorsionParameters&)'
  383 |   const MMFF94TorsionParameters& operator = (const MMFF94TorsionParameters& param)
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:366:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  366 |  class BALL_EXPORT MMFF94TorsionParameters
      |                    ^~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/rtti.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/regularData3D.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/GENETICDOCK/evolutionaryDocking.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/GENETICDOCK/evolutionaryDocking.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:3: note: in expansion of macro 'BALL_CREATE'
  374 |   BALL_CREATE(MMFF94TorsionParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:3: note: in expansion of macro 'BALL_CREATE'
  422 |   BALL_CREATE(MMFF94PlaneParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/gridedPLP.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/GENETICDOCK/evolutionaryDocking.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:431:32: note: because 'BALL::MMFF94PlaneParameters' has user-provided 'const BALL::MMFF94PlaneParameters& BALL::MMFF94PlaneParameters::operator=(const BALL::MMFF94PlaneParameters&)'
  431 |   const MMFF94PlaneParameters& operator = (const MMFF94PlaneParameters& param)
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:414:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  414 |  class BALL_EXPORT MMFF94PlaneParameters
      |                    ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/rtti.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/regularData3D.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/GENETICDOCK/evolutionaryDocking.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/GENETICDOCK/evolutionaryDocking.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:3: note: in expansion of macro 'BALL_CREATE'
  422 |   BALL_CREATE(MMFF94PlaneParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:3: note: in expansion of macro 'BALL_CREATE'
  473 |   BALL_CREATE(MMFF94VDWParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/gridedPLP.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/GENETICDOCK/evolutionaryDocking.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:482:30: note: because 'BALL::MMFF94VDWParameters' has user-provided 'const BALL::MMFF94VDWParameters& BALL::MMFF94VDWParameters::operator=(const BALL::MMFF94VDWParameters&)'
  482 |   const MMFF94VDWParameters& operator = (const MMFF94VDWParameters& param)
      |                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:458:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  458 |  class BALL_EXPORT MMFF94VDWParameters
      |                    ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/rtti.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/regularData3D.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/GENETICDOCK/evolutionaryDocking.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/GENETICDOCK/evolutionaryDocking.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:3: note: in expansion of macro 'BALL_CREATE'
  473 |   BALL_CREATE(MMFF94VDWParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94ESParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:3: note: in expansion of macro 'BALL_CREATE'
  530 |   BALL_CREATE(MMFF94ESParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/gridedPLP.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/GENETICDOCK/evolutionaryDocking.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:539:29: note: because 'BALL::MMFF94ESParameters' has user-provided 'const BALL::MMFF94ESParameters& BALL::MMFF94ESParameters::operator=(const BALL::MMFF94ESParameters&)'
  539 |   const MMFF94ESParameters& operator = (const MMFF94ESParameters& param)
      |                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:525:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  525 |  class BALL_EXPORT MMFF94ESParameters
      |                    ^~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/rtti.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/regularData3D.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/GENETICDOCK/evolutionaryDocking.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/GENETICDOCK/evolutionaryDocking.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94ESParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:3: note: in expansion of macro 'BALL_CREATE'
  530 |   BALL_CREATE(MMFF94ESParameters)
      |   ^~~~~~~~~~~
[ 90%] Building CXX object CMakeFiles/BALL.dir/source/DOCKING/GENETICDOCK/genes.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/DOCKING/GENETICDOCK/genes.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/GENETICDOCK/genes.C
[ 90%] Building CXX object CMakeFiles/BALL.dir/source/DOCKING/GENETICDOCK/geneticAlgorithm.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/DOCKING/GENETICDOCK/geneticAlgorithm.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/GENETICDOCK/geneticAlgorithm.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/GENETICDOCK/dockProblem.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/GENETICDOCK/geneticAlgorithm.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/matrix44.h:23,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/quaternion.h:8,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/GENETICDOCK/genes.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/GENETICDOCK/geneticIndividual.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/GENETICDOCK/geneticAlgorithm.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/GENETICDOCK/geneticAlgorithm.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/GENETICDOCK/dockProblem.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/GENETICDOCK/geneticAlgorithm.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/matrix44.h:23,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/quaternion.h:8,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/GENETICDOCK/genes.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/GENETICDOCK/geneticIndividual.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/GENETICDOCK/geneticAlgorithm.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/GENETICDOCK/geneticAlgorithm.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/GENETICDOCK/dockProblem.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/GENETICDOCK/geneticAlgorithm.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/matrix44.h:23,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/quaternion.h:8,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/GENETICDOCK/genes.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/GENETICDOCK/geneticIndividual.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/GENETICDOCK/geneticAlgorithm.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/GENETICDOCK/geneticAlgorithm.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 90%] Building CXX object CMakeFiles/BALL.dir/source/DOCKING/GENETICDOCK/geneticIndividual.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/DOCKING/GENETICDOCK/geneticIndividual.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/GENETICDOCK/geneticIndividual.C
[ 90%] Building CXX object CMakeFiles/BALL.dir/source/DOCKING/GENETICDOCK/parameter.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/DOCKING/GENETICDOCK/parameter.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/GENETICDOCK/parameter.C
[ 90%] Building CXX object CMakeFiles/BALL.dir/source/DOCKING/GENETICDOCK/rotateBond.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/DOCKING/GENETICDOCK/rotateBond.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/GENETICDOCK/rotateBond.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/GENETICDOCK/rotateBond.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/matrix44.h:23,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/GENETICDOCK/rotateBond.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/GENETICDOCK/rotateBond.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/GENETICDOCK/rotateBond.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/matrix44.h:23,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/GENETICDOCK/rotateBond.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/GENETICDOCK/rotateBond.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/GENETICDOCK/rotateBond.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/matrix44.h:23,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/GENETICDOCK/rotateBond.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/GENETICDOCK/rotateBond.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 90%] Building CXX object CMakeFiles/BALL.dir/source/DOCKING/GENETICDOCK/rotateBonds.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/DOCKING/GENETICDOCK/rotateBonds.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/GENETICDOCK/rotateBonds.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/GENETICDOCK/rotateBonds.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/GENETICDOCK/rotateBonds.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/GENETICDOCK/rotateBonds.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/GENETICDOCK/rotateBonds.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/GENETICDOCK/rotateBonds.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/GENETICDOCK/rotateBonds.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 90%] Building CXX object CMakeFiles/BALL.dir/source/DOCKING/IMGDOCK/IMGDock.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/DOCKING/IMGDOCK/IMGDock.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/IMGDOCK/IMGDock.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/dockingAlgorithm.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/IMGDOCK/IMGDock.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/IMGDOCK/IMGDock.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/dockingAlgorithm.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/IMGDOCK/IMGDock.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/IMGDOCK/IMGDock.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/dockingAlgorithm.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/IMGDOCK/IMGDock.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/IMGDOCK/IMGDock.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/dockingAlgorithm.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/IMGDOCK/IMGDock.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/IMGDOCK/IMGDock.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/dockingAlgorithm.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/IMGDOCK/IMGDock.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/IMGDOCK/IMGDock.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/dockingAlgorithm.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/IMGDOCK/IMGDock.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/IMGDOCK/IMGDock.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/dockingAlgorithm.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/IMGDOCK/IMGDock.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/IMGDOCK/IMGDock.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94ParametersBase::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:43:3: note: in expansion of macro 'BALL_CREATE'
   43 |   BALL_CREATE(MMFF94ParametersBase)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/gridedPLP.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/IMGDOCK/IMGDock.C:16:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/dockingAlgorithm.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/IMGDOCK/IMGDock.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/IMGDOCK/IMGDock.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:3: note: in expansion of macro 'BALL_CREATE'
  217 |   BALL_CREATE(MMFF94StretchParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/gridedPLP.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/IMGDOCK/IMGDock.C:16:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:226:34: note: because 'BALL::MMFF94StretchParameters' has user-provided 'const BALL::MMFF94StretchParameters& BALL::MMFF94StretchParameters::operator=(const BALL::MMFF94StretchParameters&)'
  226 |   const MMFF94StretchParameters& operator = (const MMFF94StretchParameters& param)
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:185:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  185 |  class BALL_EXPORT MMFF94StretchParameters:
      |                    ^~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/dockingAlgorithm.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/IMGDOCK/IMGDock.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/IMGDOCK/IMGDock.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:3: note: in expansion of macro 'BALL_CREATE'
  217 |   BALL_CREATE(MMFF94StretchParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94BendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:3: note: in expansion of macro 'BALL_CREATE'
  271 |   BALL_CREATE(MMFF94BendParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/gridedPLP.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/IMGDOCK/IMGDock.C:16:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:280:31: note: because 'BALL::MMFF94BendParameters' has user-provided 'const BALL::MMFF94BendParameters& BALL::MMFF94BendParameters::operator=(const BALL::MMFF94BendParameters&)'
  280 |   const MMFF94BendParameters& operator = (const MMFF94BendParameters& param)
      |                               ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:263:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  263 |  class BALL_EXPORT MMFF94BendParameters
      |                    ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/dockingAlgorithm.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/IMGDOCK/IMGDock.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/IMGDOCK/IMGDock.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94BendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:3: note: in expansion of macro 'BALL_CREATE'
  271 |   BALL_CREATE(MMFF94BendParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:3: note: in expansion of macro 'BALL_CREATE'
  318 |   BALL_CREATE(MMFF94StretchBendParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/gridedPLP.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/IMGDOCK/IMGDock.C:16:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:327:38: note: because 'BALL::MMFF94StretchBendParameters' has user-provided 'const BALL::MMFF94StretchBendParameters& BALL::MMFF94StretchBendParameters::operator=(const BALL::MMFF94StretchBendParameters&)'
  327 |   const MMFF94StretchBendParameters& operator = (const MMFF94StretchBendParameters& param)
      |                                      ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:310:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  310 |  class BALL_EXPORT MMFF94StretchBendParameters
      |                    ^~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/dockingAlgorithm.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/IMGDOCK/IMGDock.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/IMGDOCK/IMGDock.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:3: note: in expansion of macro 'BALL_CREATE'
  318 |   BALL_CREATE(MMFF94StretchBendParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:3: note: in expansion of macro 'BALL_CREATE'
  374 |   BALL_CREATE(MMFF94TorsionParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/gridedPLP.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/IMGDOCK/IMGDock.C:16:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:383:34: note: because 'BALL::MMFF94TorsionParameters' has user-provided 'const BALL::MMFF94TorsionParameters& BALL::MMFF94TorsionParameters::operator=(const BALL::MMFF94TorsionParameters&)'
  383 |   const MMFF94TorsionParameters& operator = (const MMFF94TorsionParameters& param)
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:366:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  366 |  class BALL_EXPORT MMFF94TorsionParameters
      |                    ^~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/dockingAlgorithm.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/IMGDOCK/IMGDock.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/IMGDOCK/IMGDock.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:3: note: in expansion of macro 'BALL_CREATE'
  374 |   BALL_CREATE(MMFF94TorsionParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:3: note: in expansion of macro 'BALL_CREATE'
  422 |   BALL_CREATE(MMFF94PlaneParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/gridedPLP.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/IMGDOCK/IMGDock.C:16:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:431:32: note: because 'BALL::MMFF94PlaneParameters' has user-provided 'const BALL::MMFF94PlaneParameters& BALL::MMFF94PlaneParameters::operator=(const BALL::MMFF94PlaneParameters&)'
  431 |   const MMFF94PlaneParameters& operator = (const MMFF94PlaneParameters& param)
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:414:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  414 |  class BALL_EXPORT MMFF94PlaneParameters
      |                    ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/dockingAlgorithm.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/IMGDOCK/IMGDock.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/IMGDOCK/IMGDock.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:3: note: in expansion of macro 'BALL_CREATE'
  422 |   BALL_CREATE(MMFF94PlaneParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:3: note: in expansion of macro 'BALL_CREATE'
  473 |   BALL_CREATE(MMFF94VDWParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/gridedPLP.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/IMGDOCK/IMGDock.C:16:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:482:30: note: because 'BALL::MMFF94VDWParameters' has user-provided 'const BALL::MMFF94VDWParameters& BALL::MMFF94VDWParameters::operator=(const BALL::MMFF94VDWParameters&)'
  482 |   const MMFF94VDWParameters& operator = (const MMFF94VDWParameters& param)
      |                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:458:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  458 |  class BALL_EXPORT MMFF94VDWParameters
      |                    ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/dockingAlgorithm.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/IMGDOCK/IMGDock.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/IMGDOCK/IMGDock.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:3: note: in expansion of macro 'BALL_CREATE'
  473 |   BALL_CREATE(MMFF94VDWParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94ESParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:3: note: in expansion of macro 'BALL_CREATE'
  530 |   BALL_CREATE(MMFF94ESParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/gridedPLP.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/IMGDOCK/IMGDock.C:16:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:539:29: note: because 'BALL::MMFF94ESParameters' has user-provided 'const BALL::MMFF94ESParameters& BALL::MMFF94ESParameters::operator=(const BALL::MMFF94ESParameters&)'
  539 |   const MMFF94ESParameters& operator = (const MMFF94ESParameters& param)
      |                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:525:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  525 |  class BALL_EXPORT MMFF94ESParameters
      |                    ^~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/dockingAlgorithm.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/IMGDOCK/IMGDock.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/IMGDOCK/IMGDock.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94ESParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:3: note: in expansion of macro 'BALL_CREATE'
  530 |   BALL_CREATE(MMFF94ESParameters)
      |   ^~~~~~~~~~~
[ 90%] Building CXX object CMakeFiles/BALL.dir/source/SYSTEM/binaryFileAdaptor.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/SYSTEM/binaryFileAdaptor.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SYSTEM/binaryFileAdaptor.C
[ 90%] Building CXX object CMakeFiles/BALL.dir/source/SYSTEM/directory.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/SYSTEM/directory.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SYSTEM/directory.C
[ 90%] Building CXX object CMakeFiles/BALL.dir/source/SYSTEM/file.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/SYSTEM/file.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SYSTEM/file.C
[ 90%] Building CXX object CMakeFiles/BALL.dir/source/SYSTEM/fileSystem.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/SYSTEM/fileSystem.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SYSTEM/fileSystem.C
[ 90%] Building CXX object CMakeFiles/BALL.dir/source/SYSTEM/mutex.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/SYSTEM/mutex.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SYSTEM/mutex.C
[ 90%] Building CXX object CMakeFiles/BALL.dir/source/SYSTEM/networking.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/SYSTEM/networking.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SYSTEM/networking.C
In file included from /usr/include/boost/bind.hpp:30,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SYSTEM/networking.C:5:
/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use <boost/bind/bind.hpp> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.'
   36 | BOOST_PRAGMA_MESSAGE(
      | ^~~~~~~~~~~~~~~~~~~~
[ 90%] Building CXX object CMakeFiles/BALL.dir/source/SYSTEM/path.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/SYSTEM/path.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SYSTEM/path.C
[ 90%] Building CXX object CMakeFiles/BALL.dir/source/SYSTEM/simpleDownloader.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/SYSTEM/simpleDownloader.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SYSTEM/simpleDownloader.C
[ 90%] Building CXX object CMakeFiles/BALL.dir/source/SYSTEM/sysinfo.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/SYSTEM/sysinfo.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SYSTEM/sysinfo.C
[ 90%] Building CXX object CMakeFiles/BALL.dir/source/SYSTEM/timer.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/SYSTEM/timer.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SYSTEM/timer.C
[ 90%] Building CXX object CMakeFiles/BALL.dir/source/XRAY/crystalGenerator.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/XRAY/crystalGenerator.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/XRAY/crystalGenerator.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/XRAY/crystalGenerator.h:8,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/XRAY/crystalGenerator.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/XRAY/crystalGenerator.h:8,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/XRAY/crystalGenerator.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/XRAY/crystalGenerator.h:8,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/XRAY/crystalGenerator.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/XRAY/crystalGenerator.h:8,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/XRAY/crystalGenerator.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/XRAY/crystalGenerator.h:8,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/XRAY/crystalGenerator.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/XRAY/crystalGenerator.h:8,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/XRAY/crystalGenerator.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/XRAY/crystalGenerator.C: In member function 'std::__cxx11::list<BALL::System*> BALL::CrystalGenerator::generateSymMoleculesWithinDistance(float)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/XRAY/crystalGenerator.C:269:20: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Molecule, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::MoleculeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Molecule, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::MoleculeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Molecule, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::MoleculeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  269 |         temp_mit = mit;
      |                    ^~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/XRAY/crystalGenerator.h:8,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/XRAY/crystalGenerator.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Molecule, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::MoleculeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Molecule; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::MoleculeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Molecule, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::MoleculeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Molecule, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::MoleculeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Molecule, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::MoleculeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Molecule, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::MoleculeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Molecule, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::MoleculeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Molecule, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::MoleculeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Molecule, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::MoleculeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Molecule; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::MoleculeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/XRAY/crystalGenerator.C: In member function 'std::__cxx11::list<BALL::System*> BALL::CrystalGenerator::generateSymMoleculesWithinDistance(float)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/XRAY/crystalGenerator.C:269:20: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Molecule, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::MoleculeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Molecule, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::MoleculeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Molecule, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::MoleculeIteratorTraits>&)' first required here
  269 |         temp_mit = mit;
      |                    ^~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/XRAY/crystalGenerator.C:272:15: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Molecule, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::MoleculeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Molecule, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::MoleculeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Molecule, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::MoleculeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  272 |         mit = temp_mit;
      |               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/XRAY/crystalGenerator.h:8,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/XRAY/crystalGenerator.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Molecule, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::MoleculeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Molecule; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::MoleculeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 95%] Building CXX object CMakeFiles/BALL.dir/source/XRAY/crystalInfo.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/XRAY/crystalInfo.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/XRAY/crystalInfo.C
[ 95%] Building CXX object CMakeFiles/BALL.dir/source/XRAY/spaceGroupParameters.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/XRAY/spaceGroupParameters.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/XRAY/spaceGroupParameters.C
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/XRAY/spaceGroupParameters.C: In member function 'virtual bool BALL::SpaceGroupParameters::extractSpaceGroup(BALL::Parameters&, const BALL::String&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/XRAY/spaceGroupParameters.C:26:59: warning: unused parameter 'parameters' [-Wunused-parameter]
   26 |  bool SpaceGroupParameters::extractSpaceGroup(Parameters& parameters, const String& space_group)
      |                                               ~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/XRAY/spaceGroupParameters.C:26:85: warning: unused parameter 'space_group' [-Wunused-parameter]
   26 |  bool SpaceGroupParameters::extractSpaceGroup(Parameters& parameters, const String& space_group)
      |                                                                       ~~~~~~~~~~~~~~^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/XRAY/spaceGroupParameters.C: In member function 'virtual bool BALL::SpaceGroupParameters::extractSpaceGroup(BALL::Parameters&, BALL::Position)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/XRAY/spaceGroupParameters.C:31:59: warning: unused parameter 'parameters' [-Wunused-parameter]
   31 |  bool SpaceGroupParameters::extractSpaceGroup(Parameters& parameters, const Position iucr_no)
      |                                               ~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/XRAY/spaceGroupParameters.C:31:86: warning: unused parameter 'iucr_no' [-Wunused-parameter]
   31 |  bool SpaceGroupParameters::extractSpaceGroup(Parameters& parameters, const Position iucr_no)
      |                                                                       ~~~~~~~~~~~~~~~^~~~~~~
[ 95%] Linking CXX shared library lib/libBALL.so
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make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/CMakeFiles/BALL_autogen.dir/DependInfo.cmake --color=
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f CMakeFiles/BALL_autogen.dir/build.make CMakeFiles/BALL_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[  0%] Automatic MOC for target BALL
/usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/CMakeFiles/BALL_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[  3%] Built target BALL_autogen
make  -f CMakeFiles/BALL.dir/build.make CMakeFiles/BALL.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/CMakeFiles/BALL.dir/DependInfo.cmake --color=
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f CMakeFiles/BALL.dir/build.make CMakeFiles/BALL.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make[5]: Nothing to be done for 'CMakeFiles/BALL.dir/build'.
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 65%] Built target BALL
make  -f CMakeFiles/VIEW_autogen.dir/build.make CMakeFiles/VIEW_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/CMakeFiles/VIEW_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target VIEW_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f CMakeFiles/VIEW_autogen.dir/build.make CMakeFiles/VIEW_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 65%] Generating include/BALL/VIEW/UIC/ui_undoManagerDialog.h
/usr/lib/qt5/bin/uic -o /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include/BALL/VIEW/UIC/ui_undoManagerDialog.h /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/undoManagerDialog.ui
[ 65%] Generating include/BALL/VIEW/UIC/ui_FDPBDialog.h
/usr/lib/qt5/bin/uic -o /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include/BALL/VIEW/UIC/ui_FDPBDialog.h /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/FDPBDialog.ui
[ 65%] Generating include/BALL/VIEW/UIC/ui_HTMLViewErrorWidget.h
/usr/lib/qt5/bin/uic -o /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include/BALL/VIEW/UIC/ui_HTMLViewErrorWidget.h /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/HTMLViewErrorWidget.ui
[ 65%] Generating include/BALL/VIEW/UIC/ui_MMFF94ConfigurationDialog.h
/usr/lib/qt5/bin/uic -o /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include/BALL/VIEW/UIC/ui_MMFF94ConfigurationDialog.h /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/MMFF94ConfigurationDialog.ui
[ 65%] Generating include/BALL/VIEW/UIC/ui_PTEDialog.h
/usr/lib/qt5/bin/uic -o /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include/BALL/VIEW/UIC/ui_PTEDialog.h /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/PTEDialog.ui
[ 65%] Generating include/BALL/VIEW/UIC/ui_amberConfigurationDialog.h
/usr/lib/qt5/bin/uic -o /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include/BALL/VIEW/UIC/ui_amberConfigurationDialog.h /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/amberConfigurationDialog.ui
[ 65%] Generating include/BALL/VIEW/UIC/ui_assignBondOrderConfigurationDialog.h
/usr/lib/qt5/bin/uic -o /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include/BALL/VIEW/UIC/ui_assignBondOrderConfigurationDialog.h /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/assignBondOrderConfigurationDialog.ui
[ 65%] Generating include/BALL/VIEW/UIC/ui_assignBondOrderResultsDialog.h
/usr/lib/qt5/bin/uic -o /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include/BALL/VIEW/UIC/ui_assignBondOrderResultsDialog.h /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/assignBondOrderResultsDialog.ui
[ 65%] Generating include/BALL/VIEW/UIC/ui_atomOverview.h
/usr/lib/qt5/bin/uic -o /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include/BALL/VIEW/UIC/ui_atomOverview.h /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/atomOverview.ui
[ 68%] Generating include/BALL/VIEW/UIC/ui_bondProperties.h
/usr/lib/qt5/bin/uic -o /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include/BALL/VIEW/UIC/ui_bondProperties.h /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/bondProperties.ui
[ 68%] Generating include/BALL/VIEW/UIC/ui_charmmConfigurationDialog.h
/usr/lib/qt5/bin/uic -o /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include/BALL/VIEW/UIC/ui_charmmConfigurationDialog.h /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/charmmConfigurationDialog.ui
[ 68%] Generating include/BALL/VIEW/UIC/ui_clippingDialog.h
/usr/lib/qt5/bin/uic -o /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include/BALL/VIEW/UIC/ui_clippingDialog.h /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/clippingDialog.ui
[ 68%] Generating include/BALL/VIEW/UIC/ui_coloringSettingsDialog.h
/usr/lib/qt5/bin/uic -o /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include/BALL/VIEW/UIC/ui_coloringSettingsDialog.h /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/coloringSettingsDialog.ui
[ 68%] Generating include/BALL/VIEW/UIC/ui_compositeProperties.h
/usr/lib/qt5/bin/uic -o /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include/BALL/VIEW/UIC/ui_compositeProperties.h /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/compositeProperties.ui
[ 68%] Generating include/BALL/VIEW/UIC/ui_contourSurfaceDialog.h
/usr/lib/qt5/bin/uic -o /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include/BALL/VIEW/UIC/ui_contourSurfaceDialog.h /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/contourSurfaceDialog.ui
[ 68%] Generating include/BALL/VIEW/UIC/ui_displayProperties.h
/usr/lib/qt5/bin/uic -o /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include/BALL/VIEW/UIC/ui_displayProperties.h /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/displayProperties.ui
[ 68%] Generating include/BALL/VIEW/UIC/ui_dockDialog.h
/usr/lib/qt5/bin/uic -o /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include/BALL/VIEW/UIC/ui_dockDialog.h /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/dockDialog.ui
[ 68%] Generating include/BALL/VIEW/UIC/ui_dockProgressDialog.h
/usr/lib/qt5/bin/uic -o /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include/BALL/VIEW/UIC/ui_dockProgressDialog.h /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/dockProgressDialog.ui
[ 68%] Generating include/BALL/VIEW/UIC/ui_dockResultDialog.h
/usr/lib/qt5/bin/uic -o /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include/BALL/VIEW/UIC/ui_dockResultDialog.h /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/dockResultDialog.ui
[ 68%] Generating include/BALL/VIEW/UIC/ui_downloadElectronDensity.h
/usr/lib/qt5/bin/uic -o /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include/BALL/VIEW/UIC/ui_downloadElectronDensity.h /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/downloadElectronDensity.ui
[ 68%] Generating include/BALL/VIEW/UIC/ui_downloadPDBFile.h
/usr/lib/qt5/bin/uic -o /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include/BALL/VIEW/UIC/ui_downloadPDBFile.h /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/downloadPDBFile.ui
[ 68%] Generating include/BALL/VIEW/UIC/ui_editSettings.h
/usr/lib/qt5/bin/uic -o /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include/BALL/VIEW/UIC/ui_editSettings.h /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/editSettings.ui
[ 68%] Generating include/BALL/VIEW/UIC/ui_editSingleShortcut.h
/usr/lib/qt5/bin/uic -o /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include/BALL/VIEW/UIC/ui_editSingleShortcut.h /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/editSingleShortcut.ui
[ 68%] Generating include/BALL/VIEW/UIC/ui_editorPDBInfoDialog.h
/usr/lib/qt5/bin/uic -o /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include/BALL/VIEW/UIC/ui_editorPDBInfoDialog.h /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/editorPDBInfoDialog.ui
[ 68%] Generating include/BALL/VIEW/UIC/ui_exportGeometryDialog.h
/usr/lib/qt5/bin/uic -o /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include/BALL/VIEW/UIC/ui_exportGeometryDialog.h /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/exportGeometryDialog.ui
[ 68%] Generating include/BALL/VIEW/UIC/ui_fieldLinesDialog.h
/usr/lib/qt5/bin/uic -o /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include/BALL/VIEW/UIC/ui_fieldLinesDialog.h /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/fieldLinesDialog.ui
[ 68%] Generating include/BALL/VIEW/UIC/ui_generateCrystalDialog.h
/usr/lib/qt5/bin/uic -o /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include/BALL/VIEW/UIC/ui_generateCrystalDialog.h /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/generateCrystalDialog.ui
[ 68%] Generating include/BALL/VIEW/UIC/ui_gridColorWidget.h
/usr/lib/qt5/bin/uic -o /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include/BALL/VIEW/UIC/ui_gridColorWidget.h /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/gridColorWidget.ui
[ 68%] Generating include/BALL/VIEW/UIC/ui_gridVisualizationDialog.h
/usr/lib/qt5/bin/uic -o /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include/BALL/VIEW/UIC/ui_gridVisualizationDialog.h /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/gridVisualizationDialog.ui
[ 68%] Generating include/BALL/VIEW/UIC/ui_labelDialog.h
/usr/lib/qt5/bin/uic -o /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include/BALL/VIEW/UIC/ui_labelDialog.h /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/labelDialog.ui
[ 68%] Generating include/BALL/VIEW/UIC/ui_lightSettings.h
/usr/lib/qt5/bin/uic -o /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include/BALL/VIEW/UIC/ui_lightSettings.h /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/lightSettings.ui
[ 68%] Generating include/BALL/VIEW/UIC/ui_mainControlPreferences.h
/usr/lib/qt5/bin/uic -o /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include/BALL/VIEW/UIC/ui_mainControlPreferences.h /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/mainControlPreferences.ui
[ 71%] Generating include/BALL/VIEW/UIC/ui_materialSettings.h
/usr/lib/qt5/bin/uic -o /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include/BALL/VIEW/UIC/ui_materialSettings.h /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/materialSettings.ui
[ 71%] Generating include/BALL/VIEW/UIC/ui_minimizationDialog.h
/usr/lib/qt5/bin/uic -o /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include/BALL/VIEW/UIC/ui_minimizationDialog.h /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/minimizationDialog.ui
[ 71%] Generating include/BALL/VIEW/UIC/ui_modelSettingsDialog.h
/usr/lib/qt5/bin/uic -o /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include/BALL/VIEW/UIC/ui_modelSettingsDialog.h /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/modelSettingsDialog.ui
[ 71%] Generating include/BALL/VIEW/UIC/ui_modifyRepresentationDialog.h
/usr/lib/qt5/bin/uic -o /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include/BALL/VIEW/UIC/ui_modifyRepresentationDialog.h /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/modifyRepresentationDialog.ui
[ 71%] Generating include/BALL/VIEW/UIC/ui_molecularDynamicsDialog.h
/usr/lib/qt5/bin/uic -o /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include/BALL/VIEW/UIC/ui_molecularDynamicsDialog.h /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/molecularDynamicsDialog.ui
[ 71%] Generating include/BALL/VIEW/UIC/ui_networkPreferences.h
/usr/lib/qt5/bin/uic -o /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include/BALL/VIEW/UIC/ui_networkPreferences.h /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/networkPreferences.ui
[ 71%] Generating include/BALL/VIEW/UIC/ui_openSavePreferences.h
/usr/lib/qt5/bin/uic -o /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include/BALL/VIEW/UIC/ui_openSavePreferences.h /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/openSavePreferences.ui
[ 71%] Generating include/BALL/VIEW/UIC/ui_parsedFunctionDialog.h
/usr/lib/qt5/bin/uic -o /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include/BALL/VIEW/UIC/ui_parsedFunctionDialog.h /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/parsedFunctionDialog.ui
[ 71%] Generating include/BALL/VIEW/UIC/ui_peptideDialog.h
/usr/lib/qt5/bin/uic -o /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include/BALL/VIEW/UIC/ui_peptideDialog.h /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/peptideDialog.ui
[ 71%] Generating include/BALL/VIEW/UIC/ui_pluginDialog.h
/usr/lib/qt5/bin/uic -o /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include/BALL/VIEW/UIC/ui_pluginDialog.h /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/pluginDialog.ui
[ 71%] Generating include/BALL/VIEW/UIC/ui_preferences.h
/usr/lib/qt5/bin/uic -o /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include/BALL/VIEW/UIC/ui_preferences.h /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/preferences.ui
[ 71%] Generating include/BALL/VIEW/UIC/ui_propEditorWidget.h
/usr/lib/qt5/bin/uic -o /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include/BALL/VIEW/UIC/ui_propEditorWidget.h /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/propEditorWidget.ui
[ 71%] Generating include/BALL/VIEW/UIC/ui_propertyEditor.h
/usr/lib/qt5/bin/uic -o /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include/BALL/VIEW/UIC/ui_propertyEditor.h /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/propertyEditor.ui
[ 71%] Generating include/BALL/VIEW/UIC/ui_pubchemDialog.h
/usr/lib/qt5/bin/uic -o /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include/BALL/VIEW/UIC/ui_pubchemDialog.h /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/pubchemDialog.ui
[ 71%] Generating include/BALL/VIEW/UIC/ui_raytraceableContourSurfaceDialog.h
/usr/lib/qt5/bin/uic -o /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include/BALL/VIEW/UIC/ui_raytraceableContourSurfaceDialog.h /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/raytraceableContourSurfaceDialog.ui
[ 71%] Generating include/BALL/VIEW/UIC/ui_setCamera.h
/usr/lib/qt5/bin/uic -o /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include/BALL/VIEW/UIC/ui_setCamera.h /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/setCamera.ui
[ 71%] Generating include/BALL/VIEW/UIC/ui_setClippingPlane.h
/usr/lib/qt5/bin/uic -o /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include/BALL/VIEW/UIC/ui_setClippingPlane.h /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/setClippingPlane.ui
[ 71%] Generating include/BALL/VIEW/UIC/ui_shortcutDialog.h
/usr/lib/qt5/bin/uic -o /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include/BALL/VIEW/UIC/ui_shortcutDialog.h /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/shortcutDialog.ui
[ 71%] Generating include/BALL/VIEW/UIC/ui_snapShotVisualisation.h
/usr/lib/qt5/bin/uic -o /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include/BALL/VIEW/UIC/ui_snapShotVisualisation.h /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/snapShotVisualisation.ui
[ 71%] Generating include/BALL/VIEW/UIC/ui_stageSettings.h
/usr/lib/qt5/bin/uic -o /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include/BALL/VIEW/UIC/ui_stageSettings.h /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/stageSettings.ui
[ 71%] Generating include/BALL/VIEW/UIC/ui_stereoSettingsDialog.h
/usr/lib/qt5/bin/uic -o /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include/BALL/VIEW/UIC/ui_stereoSettingsDialog.h /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/stereoSettingsDialog.ui
[ 71%] Automatic MOC for target VIEW
/usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/CMakeFiles/VIEW_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 71%] Built target VIEW_autogen
make  -f CMakeFiles/VIEW.dir/build.make CMakeFiles/VIEW.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/CMakeFiles/VIEW.dir/DependInfo.cmake --color=
Scanning dependencies of target VIEW
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f CMakeFiles/VIEW.dir/build.make CMakeFiles/VIEW.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 71%] Building CXX object CMakeFiles/VIEW.dir/VIEW_autogen/mocs_compilation.cpp.o
/usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/VIEW_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/mocs_compilation.cpp
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SOLVATION/poissonBoltzmann.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/OR3C44JOXY/../../../include/BALL/VIEW/DIALOGS/FDPBDialog.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/OR3C44JOXY/moc_FDPBDialog.cpp:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/mocs_compilation.cpp:4:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector2.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/regularData2D.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/2AM2ODBFSX/../../../include/BALL/VIEW/DATATYPE/standardDatasets.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/2AM2ODBFSX/moc_standardDatasets.cpp:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/mocs_compilation.cpp:3:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SOLVATION/poissonBoltzmann.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/OR3C44JOXY/../../../include/BALL/VIEW/DIALOGS/FDPBDialog.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/OR3C44JOXY/moc_FDPBDialog.cpp:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/mocs_compilation.cpp:4:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector2.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/regularData2D.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/2AM2ODBFSX/../../../include/BALL/VIEW/DATATYPE/standardDatasets.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/2AM2ODBFSX/moc_standardDatasets.cpp:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/mocs_compilation.cpp:3:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SOLVATION/poissonBoltzmann.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/OR3C44JOXY/../../../include/BALL/VIEW/DIALOGS/FDPBDialog.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/OR3C44JOXY/moc_FDPBDialog.cpp:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/mocs_compilation.cpp:4:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector2.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/regularData2D.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/2AM2ODBFSX/../../../include/BALL/VIEW/DATATYPE/standardDatasets.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/2AM2ODBFSX/moc_standardDatasets.cpp:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/mocs_compilation.cpp:3:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/OR3C44JOXY/../../../include/BALL/VIEW/DIALOGS/labelDialog.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/OR3C44JOXY/moc_labelDialog.cpp:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/mocs_compilation.cpp:29:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/message.h: In member function 'void BALL::VIEW::SceneMessage::setStage(BALL::VIEW::Stage)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/message.h:409:15: warning: implicitly-declared 'BALL::VIEW::Stage& BALL::VIEW::Stage::operator=(const BALL::VIEW::Stage&)' is deprecated [-Wdeprecated-copy]
  409 |    { stage_ = stage;}
      |               ^~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/message.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/OR3C44JOXY/../../../include/BALL/VIEW/DIALOGS/labelDialog.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/OR3C44JOXY/moc_labelDialog.cpp:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/mocs_compilation.cpp:29:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/stage.h:301:4: note: because 'BALL::VIEW::Stage' has user-provided 'BALL::VIEW::Stage::Stage(const BALL::VIEW::Stage&)'
  301 |    Stage(const Stage& stage);
      |    ^~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderSetup.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/OR3C44JOXY/../../../include/BALL/VIEW/DIALOGS/stageSettings.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/OR3C44JOXY/moc_stageSettings.cpp:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/mocs_compilation.cpp:51:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor 'BALL::VIEW::FrameBufferFormat::FrameBufferFormat()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:53:38: warning: implicitly-declared 'constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)' is deprecated [-Wdeprecated-copy]
   53 |       pixelFormat(PixelFormat::RGB_32)
      |                                      ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderSetup.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/OR3C44JOXY/../../../include/BALL/VIEW/DIALOGS/stageSettings.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/OR3C44JOXY/moc_stageSettings.cpp:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/mocs_compilation.cpp:51:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because 'BALL::VIEW::PixelFormat' has user-provided 'BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)'
  162 |    PixelFormat &operator=(const PixelFormat &f)
      |                 ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderSetup.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/OR3C44JOXY/../../../include/BALL/VIEW/DIALOGS/stageSettings.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/OR3C44JOXY/moc_stageSettings.cpp:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/mocs_compilation.cpp:51:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor 'BALL::VIEW::FrameBufferFormat::FrameBufferFormat(BALL::Size, BALL::Size, const BALL::VIEW::PixelFormat&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:60:30: warning: implicitly-declared 'constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)' is deprecated [-Wdeprecated-copy]
   60 |       pixelFormat(pixelFormat)
      |                              ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderSetup.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/OR3C44JOXY/../../../include/BALL/VIEW/DIALOGS/stageSettings.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/OR3C44JOXY/moc_stageSettings.cpp:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/mocs_compilation.cpp:51:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because 'BALL::VIEW::PixelFormat' has user-provided 'BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)'
  162 |    PixelFormat &operator=(const PixelFormat &f)
      |                 ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderSetup.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/OR3C44JOXY/../../../include/BALL/VIEW/DIALOGS/stageSettings.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/OR3C44JOXY/moc_stageSettings.cpp:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/mocs_compilation.cpp:51:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor 'BALL::VIEW::FrameBufferFormat::FrameBufferFormat(BALL::Size, BALL::Size, BALL::Size, const BALL::VIEW::PixelFormat&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:69:30: warning: implicitly-declared 'constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)' is deprecated [-Wdeprecated-copy]
   69 |       pixelFormat(pixelFormat)
      |                              ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderSetup.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/OR3C44JOXY/../../../include/BALL/VIEW/DIALOGS/stageSettings.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/OR3C44JOXY/moc_stageSettings.cpp:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/mocs_compilation.cpp:51:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because 'BALL::VIEW::PixelFormat' has user-provided 'BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)'
  162 |    PixelFormat &operator=(const PixelFormat &f)
      |                 ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/string.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/2AM2ODBFSX/../../../include/BALL/VIEW/DATATYPE/dataset.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/2AM2ODBFSX/moc_dataset.cpp:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/mocs_compilation.cpp:2:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94ParametersBase::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:43:3: note: in expansion of macro 'BALL_CREATE'
   43 |   BALL_CREATE(MMFF94ParametersBase)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/WWXRSHT6NL/../../../include/BALL/VIEW/WIDGETS/molecularStructure.h:57,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/WWXRSHT6NL/moc_molecularStructure.cpp:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/mocs_compilation.cpp:76:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/string.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/2AM2ODBFSX/../../../include/BALL/VIEW/DATATYPE/dataset.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/2AM2ODBFSX/moc_dataset.cpp:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/mocs_compilation.cpp:2:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:3: note: in expansion of macro 'BALL_CREATE'
  217 |   BALL_CREATE(MMFF94StretchParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/WWXRSHT6NL/../../../include/BALL/VIEW/WIDGETS/molecularStructure.h:57,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/WWXRSHT6NL/moc_molecularStructure.cpp:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/mocs_compilation.cpp:76:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:226:34: note: because 'BALL::MMFF94StretchParameters' has user-provided 'const BALL::MMFF94StretchParameters& BALL::MMFF94StretchParameters::operator=(const BALL::MMFF94StretchParameters&)'
  226 |   const MMFF94StretchParameters& operator = (const MMFF94StretchParameters& param)
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:185:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  185 |  class BALL_EXPORT MMFF94StretchParameters:
      |                    ^~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/string.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/2AM2ODBFSX/../../../include/BALL/VIEW/DATATYPE/dataset.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/2AM2ODBFSX/moc_dataset.cpp:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/mocs_compilation.cpp:2:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:3: note: in expansion of macro 'BALL_CREATE'
  217 |   BALL_CREATE(MMFF94StretchParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94BendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:3: note: in expansion of macro 'BALL_CREATE'
  271 |   BALL_CREATE(MMFF94BendParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/WWXRSHT6NL/../../../include/BALL/VIEW/WIDGETS/molecularStructure.h:57,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/WWXRSHT6NL/moc_molecularStructure.cpp:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/mocs_compilation.cpp:76:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:280:31: note: because 'BALL::MMFF94BendParameters' has user-provided 'const BALL::MMFF94BendParameters& BALL::MMFF94BendParameters::operator=(const BALL::MMFF94BendParameters&)'
  280 |   const MMFF94BendParameters& operator = (const MMFF94BendParameters& param)
      |                               ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:263:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  263 |  class BALL_EXPORT MMFF94BendParameters
      |                    ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/string.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/2AM2ODBFSX/../../../include/BALL/VIEW/DATATYPE/dataset.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/2AM2ODBFSX/moc_dataset.cpp:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/mocs_compilation.cpp:2:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94BendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:3: note: in expansion of macro 'BALL_CREATE'
  271 |   BALL_CREATE(MMFF94BendParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:3: note: in expansion of macro 'BALL_CREATE'
  318 |   BALL_CREATE(MMFF94StretchBendParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/WWXRSHT6NL/../../../include/BALL/VIEW/WIDGETS/molecularStructure.h:57,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/WWXRSHT6NL/moc_molecularStructure.cpp:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/mocs_compilation.cpp:76:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:327:38: note: because 'BALL::MMFF94StretchBendParameters' has user-provided 'const BALL::MMFF94StretchBendParameters& BALL::MMFF94StretchBendParameters::operator=(const BALL::MMFF94StretchBendParameters&)'
  327 |   const MMFF94StretchBendParameters& operator = (const MMFF94StretchBendParameters& param)
      |                                      ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:310:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  310 |  class BALL_EXPORT MMFF94StretchBendParameters
      |                    ^~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/string.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/2AM2ODBFSX/../../../include/BALL/VIEW/DATATYPE/dataset.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/2AM2ODBFSX/moc_dataset.cpp:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/mocs_compilation.cpp:2:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:3: note: in expansion of macro 'BALL_CREATE'
  318 |   BALL_CREATE(MMFF94StretchBendParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:3: note: in expansion of macro 'BALL_CREATE'
  374 |   BALL_CREATE(MMFF94TorsionParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/WWXRSHT6NL/../../../include/BALL/VIEW/WIDGETS/molecularStructure.h:57,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/WWXRSHT6NL/moc_molecularStructure.cpp:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/mocs_compilation.cpp:76:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:383:34: note: because 'BALL::MMFF94TorsionParameters' has user-provided 'const BALL::MMFF94TorsionParameters& BALL::MMFF94TorsionParameters::operator=(const BALL::MMFF94TorsionParameters&)'
  383 |   const MMFF94TorsionParameters& operator = (const MMFF94TorsionParameters& param)
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:366:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  366 |  class BALL_EXPORT MMFF94TorsionParameters
      |                    ^~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/string.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/2AM2ODBFSX/../../../include/BALL/VIEW/DATATYPE/dataset.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/2AM2ODBFSX/moc_dataset.cpp:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/mocs_compilation.cpp:2:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:3: note: in expansion of macro 'BALL_CREATE'
  374 |   BALL_CREATE(MMFF94TorsionParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:3: note: in expansion of macro 'BALL_CREATE'
  422 |   BALL_CREATE(MMFF94PlaneParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/WWXRSHT6NL/../../../include/BALL/VIEW/WIDGETS/molecularStructure.h:57,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/WWXRSHT6NL/moc_molecularStructure.cpp:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/mocs_compilation.cpp:76:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:431:32: note: because 'BALL::MMFF94PlaneParameters' has user-provided 'const BALL::MMFF94PlaneParameters& BALL::MMFF94PlaneParameters::operator=(const BALL::MMFF94PlaneParameters&)'
  431 |   const MMFF94PlaneParameters& operator = (const MMFF94PlaneParameters& param)
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:414:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  414 |  class BALL_EXPORT MMFF94PlaneParameters
      |                    ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/string.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/2AM2ODBFSX/../../../include/BALL/VIEW/DATATYPE/dataset.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/2AM2ODBFSX/moc_dataset.cpp:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/mocs_compilation.cpp:2:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:3: note: in expansion of macro 'BALL_CREATE'
  422 |   BALL_CREATE(MMFF94PlaneParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:3: note: in expansion of macro 'BALL_CREATE'
  473 |   BALL_CREATE(MMFF94VDWParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/WWXRSHT6NL/../../../include/BALL/VIEW/WIDGETS/molecularStructure.h:57,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/WWXRSHT6NL/moc_molecularStructure.cpp:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/mocs_compilation.cpp:76:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:482:30: note: because 'BALL::MMFF94VDWParameters' has user-provided 'const BALL::MMFF94VDWParameters& BALL::MMFF94VDWParameters::operator=(const BALL::MMFF94VDWParameters&)'
  482 |   const MMFF94VDWParameters& operator = (const MMFF94VDWParameters& param)
      |                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:458:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  458 |  class BALL_EXPORT MMFF94VDWParameters
      |                    ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/string.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/2AM2ODBFSX/../../../include/BALL/VIEW/DATATYPE/dataset.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/2AM2ODBFSX/moc_dataset.cpp:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/mocs_compilation.cpp:2:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:3: note: in expansion of macro 'BALL_CREATE'
  473 |   BALL_CREATE(MMFF94VDWParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94ESParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:3: note: in expansion of macro 'BALL_CREATE'
  530 |   BALL_CREATE(MMFF94ESParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/WWXRSHT6NL/../../../include/BALL/VIEW/WIDGETS/molecularStructure.h:57,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/WWXRSHT6NL/moc_molecularStructure.cpp:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/mocs_compilation.cpp:76:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:539:29: note: because 'BALL::MMFF94ESParameters' has user-provided 'const BALL::MMFF94ESParameters& BALL::MMFF94ESParameters::operator=(const BALL::MMFF94ESParameters&)'
  539 |   const MMFF94ESParameters& operator = (const MMFF94ESParameters& param)
      |                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:525:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  525 |  class BALL_EXPORT MMFF94ESParameters
      |                    ^~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/string.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/2AM2ODBFSX/../../../include/BALL/VIEW/DATATYPE/dataset.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/2AM2ODBFSX/moc_dataset.cpp:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/mocs_compilation.cpp:2:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94ESParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:3: note: in expansion of macro 'BALL_CREATE'
  530 |   BALL_CREATE(MMFF94ESParameters)
      |   ^~~~~~~~~~~
[ 71%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/assignBondOrderConfigurationDialog.C.o
/usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/assignBondOrderConfigurationDialog.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/assignBondOrderConfigurationDialog.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/assignBondOrderProcessor.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DIALOGS/assignBondOrderConfigurationDialog.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/assignBondOrderConfigurationDialog.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/assignBondOrderProcessor.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DIALOGS/assignBondOrderConfigurationDialog.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/assignBondOrderConfigurationDialog.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/assignBondOrderProcessor.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DIALOGS/assignBondOrderConfigurationDialog.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/assignBondOrderConfigurationDialog.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/assignBondOrderProcessor.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DIALOGS/assignBondOrderConfigurationDialog.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/assignBondOrderConfigurationDialog.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/assignBondOrderProcessor.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DIALOGS/assignBondOrderConfigurationDialog.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/assignBondOrderConfigurationDialog.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/assignBondOrderProcessor.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DIALOGS/assignBondOrderConfigurationDialog.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/assignBondOrderConfigurationDialog.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 71%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/assignBondOrderResultsDialog.C.o
/usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/assignBondOrderResultsDialog.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/assignBondOrderResultsDialog.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/SDWidget.h:12,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DIALOGS/assignBondOrderResultsDialog.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/assignBondOrderResultsDialog.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/SDWidget.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DIALOGS/assignBondOrderResultsDialog.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/assignBondOrderResultsDialog.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/SDWidget.h:12,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DIALOGS/assignBondOrderResultsDialog.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/assignBondOrderResultsDialog.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/SDWidget.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DIALOGS/assignBondOrderResultsDialog.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/assignBondOrderResultsDialog.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/SDWidget.h:12,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DIALOGS/assignBondOrderResultsDialog.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/assignBondOrderResultsDialog.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/SDWidget.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DIALOGS/assignBondOrderResultsDialog.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/assignBondOrderResultsDialog.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/assignBondOrderResultsDialog.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/message.h: In member function 'void BALL::VIEW::SceneMessage::setStage(BALL::VIEW::Stage)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/message.h:409:15: warning: implicitly-declared 'BALL::VIEW::Stage& BALL::VIEW::Stage::operator=(const BALL::VIEW::Stage&)' is deprecated [-Wdeprecated-copy]
  409 |    { stage_ = stage;}
      |               ^~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/message.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/assignBondOrderResultsDialog.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/stage.h:301:4: note: because 'BALL::VIEW::Stage' has user-provided 'BALL::VIEW::Stage::Stage(const BALL::VIEW::Stage&)'
  301 |    Stage(const Stage& stage);
      |    ^~~~~
[ 71%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/atomOverview.C.o
/usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/atomOverview.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/atomOverview.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:49,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/atomOverview.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DIALOGS/atomOverview.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/atomOverview.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:49,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/atomOverview.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DIALOGS/atomOverview.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/atomOverview.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:49,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/atomOverview.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DIALOGS/atomOverview.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/atomOverview.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/atomOverview.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/message.h: In member function 'void BALL::VIEW::SceneMessage::setStage(BALL::VIEW::Stage)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/message.h:409:15: warning: implicitly-declared 'BALL::VIEW::Stage& BALL::VIEW::Stage::operator=(const BALL::VIEW::Stage&)' is deprecated [-Wdeprecated-copy]
  409 |    { stage_ = stage;}
      |               ^~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/message.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/atomOverview.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/stage.h:301:4: note: because 'BALL::VIEW::Stage' has user-provided 'BALL::VIEW::Stage::Stage(const BALL::VIEW::Stage&)'
  301 |    Stage(const Stage& stage);
      |    ^~~~~
[ 71%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/amberConfigurationDialog.C.o
/usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/amberConfigurationDialog.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/amberConfigurationDialog.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceField.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/AMBER/amber.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/amberConfigurationDialog.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/common.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/amberConfigurationDialog.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceField.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/AMBER/amber.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/amberConfigurationDialog.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/common.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/amberConfigurationDialog.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceField.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/AMBER/amber.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/amberConfigurationDialog.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/common.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/amberConfigurationDialog.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/AMBER/amberTorsion.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/amberConfigurationDialog.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/PARAMETER/cosineTorsion.h: In member function 'void BALL::CosineTorsion::Values::set(const BALL::CosineTorsion::Values&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/PARAMETER/cosineTorsion.h:105:28: warning: implicitly-declared 'BALL::CosineTorsion::SingleValues& BALL::CosineTorsion::SingleValues::operator=(const BALL::CosineTorsion::SingleValues&)' is deprecated [-Wdeprecated-copy]
  105 |      values[i] = v.values[i];
      |                            ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/PARAMETER/cosineTorsion.h:42:4: note: because 'BALL::CosineTorsion::SingleValues' has user-provided 'BALL::CosineTorsion::SingleValues::SingleValues(const BALL::CosineTorsion::SingleValues&)'
   42 |    SingleValues(const SingleValues& v)
      |    ^~~~~~~~~~~~
[ 71%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/bondProperties.C.o
/usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/bondProperties.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/bondProperties.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/bondProperties.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DIALOGS/bondProperties.h:12,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/bondProperties.C:4:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/bondProperties.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DIALOGS/bondProperties.h:12,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/bondProperties.C:4:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/bondProperties.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DIALOGS/bondProperties.h:12,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/bondProperties.C:4:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 71%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/charmmConfigurationDialog.C.o
/usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/charmmConfigurationDialog.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/charmmConfigurationDialog.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceField.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/CHARMM/charmm.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/charmmConfigurationDialog.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/common.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/charmmConfigurationDialog.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceField.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/CHARMM/charmm.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/charmmConfigurationDialog.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/common.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/charmmConfigurationDialog.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceField.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/CHARMM/charmm.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/charmmConfigurationDialog.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/common.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/charmmConfigurationDialog.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/CHARMM/charmmTorsion.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/charmmConfigurationDialog.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/PARAMETER/cosineTorsion.h: In member function 'void BALL::CosineTorsion::Values::set(const BALL::CosineTorsion::Values&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/PARAMETER/cosineTorsion.h:105:28: warning: implicitly-declared 'BALL::CosineTorsion::SingleValues& BALL::CosineTorsion::SingleValues::operator=(const BALL::CosineTorsion::SingleValues&)' is deprecated [-Wdeprecated-copy]
  105 |      values[i] = v.values[i];
      |                            ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/PARAMETER/cosineTorsion.h:42:4: note: because 'BALL::CosineTorsion::SingleValues' has user-provided 'BALL::CosineTorsion::SingleValues::SingleValues(const BALL::CosineTorsion::SingleValues&)'
   42 |    SingleValues(const SingleValues& v)
      |    ^~~~~~~~~~~~
[ 71%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/contourSurfaceDialog.C.o
/usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/contourSurfaceDialog.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/contourSurfaceDialog.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/datasetControl.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/contourSurfaceDialog.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/timeStamp.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DATATYPE/colorRGBA.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DIALOGS/contourSurfaceDialog.h:12,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/contourSurfaceDialog.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/datasetControl.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/contourSurfaceDialog.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/timeStamp.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DATATYPE/colorRGBA.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DIALOGS/contourSurfaceDialog.h:12,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/contourSurfaceDialog.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/datasetControl.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/contourSurfaceDialog.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/timeStamp.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DATATYPE/colorRGBA.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DIALOGS/contourSurfaceDialog.h:12,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/contourSurfaceDialog.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 71%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/coloringSettingsDialog.C.o
/usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/coloringSettingsDialog.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/coloringSettingsDialog.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/MODELS/standardColorProcessor.h:19,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/coloringSettingsDialog.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/common.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DIALOGS/coloringSettingsDialog.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/coloringSettingsDialog.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/MODELS/standardColorProcessor.h:19,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/coloringSettingsDialog.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/common.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DIALOGS/coloringSettingsDialog.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/coloringSettingsDialog.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/MODELS/standardColorProcessor.h:19,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/coloringSettingsDialog.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/common.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DIALOGS/coloringSettingsDialog.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/coloringSettingsDialog.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 71%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/compositeProperties.C.o
/usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/compositeProperties.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/compositeProperties.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/secondaryStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBdefs.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBInfo.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/propertyEditor.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include/BALL/VIEW/UIC/ui_compositeProperties.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DIALOGS/compositeProperties.h:18,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/compositeProperties.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DIALOGS/compositeProperties.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/compositeProperties.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/secondaryStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBdefs.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBInfo.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/propertyEditor.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include/BALL/VIEW/UIC/ui_compositeProperties.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DIALOGS/compositeProperties.h:18,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/compositeProperties.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DIALOGS/compositeProperties.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/compositeProperties.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/secondaryStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBdefs.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBInfo.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/propertyEditor.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include/BALL/VIEW/UIC/ui_compositeProperties.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DIALOGS/compositeProperties.h:18,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/compositeProperties.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DIALOGS/compositeProperties.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/compositeProperties.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 75%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/clippingDialog.C.o
/usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/clippingDialog.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/clippingDialog.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:49,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/clippingDialog.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/representation.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/clippingPlane.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DIALOGS/clippingDialog.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/clippingDialog.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:49,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/clippingDialog.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/representation.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/clippingPlane.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DIALOGS/clippingDialog.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/clippingDialog.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:49,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/clippingDialog.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/representation.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/clippingPlane.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DIALOGS/clippingDialog.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/clippingDialog.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/clippingDialog.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/message.h: In member function 'void BALL::VIEW::SceneMessage::setStage(BALL::VIEW::Stage)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/message.h:409:15: warning: implicitly-declared 'BALL::VIEW::Stage& BALL::VIEW::Stage::operator=(const BALL::VIEW::Stage&)' is deprecated [-Wdeprecated-copy]
  409 |    { stage_ = stage;}
      |               ^~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/message.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/clippingDialog.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/stage.h:301:4: note: because 'BALL::VIEW::Stage' has user-provided 'BALL::VIEW::Stage::Stage(const BALL::VIEW::Stage&)'
  301 |    Stage(const Stage& stage);
      |    ^~~~~
[ 75%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/dockDialog.C.o
/usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/dockDialog.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/dockDialog.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/dockDialog.C:17:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/expressionPredicate.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/expressionTree.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/expressionParser.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/expression.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/ruleEvaluator.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/ruleProcessor.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/radiusRuleProcessor.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DIALOGS/dockDialog.h:18,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/dockDialog.C:16:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/dockDialog.C:17:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/expressionPredicate.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/expressionTree.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/expressionParser.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/expression.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/ruleEvaluator.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/ruleProcessor.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/radiusRuleProcessor.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DIALOGS/dockDialog.h:18,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/dockDialog.C:16:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/dockDialog.C:17:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/expressionPredicate.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/expressionTree.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/expressionParser.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/expression.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/ruleEvaluator.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/ruleProcessor.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/radiusRuleProcessor.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DIALOGS/dockDialog.h:18,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/dockDialog.C:16:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/stringHashMap.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/INIFile.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/preferencesEntry.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DIALOGS/dockDialog.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/dockDialog.C:16:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94ParametersBase::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:43:3: note: in expansion of macro 'BALL_CREATE'
   43 |   BALL_CREATE(MMFF94ParametersBase)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/molecularStructure.h:57,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/dockDialog.C:18:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/stringHashMap.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/INIFile.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/preferencesEntry.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DIALOGS/dockDialog.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/dockDialog.C:16:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:3: note: in expansion of macro 'BALL_CREATE'
  217 |   BALL_CREATE(MMFF94StretchParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/molecularStructure.h:57,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/dockDialog.C:18:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:226:34: note: because 'BALL::MMFF94StretchParameters' has user-provided 'const BALL::MMFF94StretchParameters& BALL::MMFF94StretchParameters::operator=(const BALL::MMFF94StretchParameters&)'
  226 |   const MMFF94StretchParameters& operator = (const MMFF94StretchParameters& param)
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:185:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  185 |  class BALL_EXPORT MMFF94StretchParameters:
      |                    ^~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/stringHashMap.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/INIFile.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/preferencesEntry.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DIALOGS/dockDialog.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/dockDialog.C:16:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:3: note: in expansion of macro 'BALL_CREATE'
  217 |   BALL_CREATE(MMFF94StretchParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94BendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:3: note: in expansion of macro 'BALL_CREATE'
  271 |   BALL_CREATE(MMFF94BendParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/molecularStructure.h:57,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/dockDialog.C:18:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:280:31: note: because 'BALL::MMFF94BendParameters' has user-provided 'const BALL::MMFF94BendParameters& BALL::MMFF94BendParameters::operator=(const BALL::MMFF94BendParameters&)'
  280 |   const MMFF94BendParameters& operator = (const MMFF94BendParameters& param)
      |                               ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:263:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  263 |  class BALL_EXPORT MMFF94BendParameters
      |                    ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/stringHashMap.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/INIFile.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/preferencesEntry.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DIALOGS/dockDialog.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/dockDialog.C:16:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94BendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:3: note: in expansion of macro 'BALL_CREATE'
  271 |   BALL_CREATE(MMFF94BendParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:3: note: in expansion of macro 'BALL_CREATE'
  318 |   BALL_CREATE(MMFF94StretchBendParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/molecularStructure.h:57,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/dockDialog.C:18:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:327:38: note: because 'BALL::MMFF94StretchBendParameters' has user-provided 'const BALL::MMFF94StretchBendParameters& BALL::MMFF94StretchBendParameters::operator=(const BALL::MMFF94StretchBendParameters&)'
  327 |   const MMFF94StretchBendParameters& operator = (const MMFF94StretchBendParameters& param)
      |                                      ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:310:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  310 |  class BALL_EXPORT MMFF94StretchBendParameters
      |                    ^~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/stringHashMap.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/INIFile.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/preferencesEntry.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DIALOGS/dockDialog.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/dockDialog.C:16:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:3: note: in expansion of macro 'BALL_CREATE'
  318 |   BALL_CREATE(MMFF94StretchBendParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:3: note: in expansion of macro 'BALL_CREATE'
  374 |   BALL_CREATE(MMFF94TorsionParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/molecularStructure.h:57,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/dockDialog.C:18:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:383:34: note: because 'BALL::MMFF94TorsionParameters' has user-provided 'const BALL::MMFF94TorsionParameters& BALL::MMFF94TorsionParameters::operator=(const BALL::MMFF94TorsionParameters&)'
  383 |   const MMFF94TorsionParameters& operator = (const MMFF94TorsionParameters& param)
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:366:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  366 |  class BALL_EXPORT MMFF94TorsionParameters
      |                    ^~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/stringHashMap.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/INIFile.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/preferencesEntry.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DIALOGS/dockDialog.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/dockDialog.C:16:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:3: note: in expansion of macro 'BALL_CREATE'
  374 |   BALL_CREATE(MMFF94TorsionParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:3: note: in expansion of macro 'BALL_CREATE'
  422 |   BALL_CREATE(MMFF94PlaneParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/molecularStructure.h:57,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/dockDialog.C:18:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:431:32: note: because 'BALL::MMFF94PlaneParameters' has user-provided 'const BALL::MMFF94PlaneParameters& BALL::MMFF94PlaneParameters::operator=(const BALL::MMFF94PlaneParameters&)'
  431 |   const MMFF94PlaneParameters& operator = (const MMFF94PlaneParameters& param)
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:414:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  414 |  class BALL_EXPORT MMFF94PlaneParameters
      |                    ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/stringHashMap.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/INIFile.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/preferencesEntry.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DIALOGS/dockDialog.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/dockDialog.C:16:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:3: note: in expansion of macro 'BALL_CREATE'
  422 |   BALL_CREATE(MMFF94PlaneParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:3: note: in expansion of macro 'BALL_CREATE'
  473 |   BALL_CREATE(MMFF94VDWParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/molecularStructure.h:57,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/dockDialog.C:18:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:482:30: note: because 'BALL::MMFF94VDWParameters' has user-provided 'const BALL::MMFF94VDWParameters& BALL::MMFF94VDWParameters::operator=(const BALL::MMFF94VDWParameters&)'
  482 |   const MMFF94VDWParameters& operator = (const MMFF94VDWParameters& param)
      |                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:458:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  458 |  class BALL_EXPORT MMFF94VDWParameters
      |                    ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/stringHashMap.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/INIFile.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/preferencesEntry.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DIALOGS/dockDialog.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/dockDialog.C:16:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:3: note: in expansion of macro 'BALL_CREATE'
  473 |   BALL_CREATE(MMFF94VDWParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94ESParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:3: note: in expansion of macro 'BALL_CREATE'
  530 |   BALL_CREATE(MMFF94ESParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/molecularStructure.h:57,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/dockDialog.C:18:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:539:29: note: because 'BALL::MMFF94ESParameters' has user-provided 'const BALL::MMFF94ESParameters& BALL::MMFF94ESParameters::operator=(const BALL::MMFF94ESParameters&)'
  539 |   const MMFF94ESParameters& operator = (const MMFF94ESParameters& param)
      |                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:525:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  525 |  class BALL_EXPORT MMFF94ESParameters
      |                    ^~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/stringHashMap.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/INIFile.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/preferencesEntry.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DIALOGS/dockDialog.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/dockDialog.C:16:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94ESParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:3: note: in expansion of macro 'BALL_CREATE'
  530 |   BALL_CREATE(MMFF94ESParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/dockDialog.C:21:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/message.h: In member function 'void BALL::VIEW::SceneMessage::setStage(BALL::VIEW::Stage)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/message.h:409:15: warning: implicitly-declared 'BALL::VIEW::Stage& BALL::VIEW::Stage::operator=(const BALL::VIEW::Stage&)' is deprecated [-Wdeprecated-copy]
  409 |    { stage_ = stage;}
      |               ^~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/message.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/dockDialog.C:21:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/stage.h:301:4: note: because 'BALL::VIEW::Stage' has user-provided 'BALL::VIEW::Stage::Stage(const BALL::VIEW::Stage&)'
  301 |    Stage(const Stage& stage);
      |    ^~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/dockDialog.C: In member function 'const BALL::VIEW::DockDialog& BALL::VIEW::DockDialog::operator=(const BALL::VIEW::DockDialog&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/dockDialog.C:140:42: warning: implicitly-declared 'BALL::RadiusRuleProcessor& BALL::RadiusRuleProcessor::operator=(const BALL::RadiusRuleProcessor&)' is deprecated [-Wdeprecated-copy]
  140 |     radius_rule_processor_ = dock_dialog.radius_rule_processor_;
      |                                          ^~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DIALOGS/dockDialog.h:18,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/dockDialog.C:16:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/radiusRuleProcessor.h:43:3: note: because 'BALL::RadiusRuleProcessor' has user-provided 'BALL::RadiusRuleProcessor::RadiusRuleProcessor(const BALL::RadiusRuleProcessor&)'
   43 |   RadiusRuleProcessor(const RadiusRuleProcessor& rule_processor);
      |   ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/dockDialog.C:141:42: warning: implicitly-declared 'BALL::ChargeRuleProcessor& BALL::ChargeRuleProcessor::operator=(const BALL::ChargeRuleProcessor&)' is deprecated [-Wdeprecated-copy]
  141 |     charge_rule_processor_ = dock_dialog.charge_rule_processor_;
      |                                          ^~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DIALOGS/dockDialog.h:22,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/dockDialog.C:16:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/chargeRuleProcessor.h:43:3: note: because 'BALL::ChargeRuleProcessor' has user-provided 'BALL::ChargeRuleProcessor::ChargeRuleProcessor(const BALL::ChargeRuleProcessor&)'
   43 |   ChargeRuleProcessor(const ChargeRuleProcessor& rule_processor);
      |   ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DIALOGS/dockDialog.h:26,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/dockDialog.C:16:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/defaultProcessors.h: In member function 'BALL::AssignRadiusProcessor& BALL::AssignRadiusProcessor::operator=(const BALL::AssignRadiusProcessor&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/defaultProcessors.h:62:20: warning: implicitly-declared 'BALL::UnaryProcessor<BALL::Atom>& BALL::UnaryProcessor<BALL::Atom>::operator=(const BALL::UnaryProcessor<BALL::Atom>&)' is deprecated [-Wdeprecated-copy]
   62 |  class BALL_EXPORT AssignRadiusProcessor
      |                    ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/stringHashMap.h:23,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/INIFile.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/preferencesEntry.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DIALOGS/dockDialog.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/dockDialog.C:16:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/processor.h:75:3: note: because 'BALL::UnaryProcessor<BALL::Atom>' has user-provided 'BALL::UnaryProcessor<T>::UnaryProcessor(const BALL::UnaryProcessor<T>&) [with T = BALL::Atom]'
   75 |   UnaryProcessor
      |   ^~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/dockDialog.C: In member function 'const BALL::VIEW::DockDialog& BALL::VIEW::DockDialog::operator=(const BALL::VIEW::DockDialog&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/dockDialog.C:142:37: note: synthesized method 'BALL::AssignRadiusProcessor& BALL::AssignRadiusProcessor::operator=(const BALL::AssignRadiusProcessor&)' first required here
  142 |     radius_processor_ = dock_dialog.radius_processor_;
      |                                     ^~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/dockDialog.C: In member function 'bool BALL::VIEW::DockDialog::applyProcessors_()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/dockDialog.C:533:59: warning: implicitly-declared 'BALL::ChargeRuleProcessor& BALL::ChargeRuleProcessor::operator=(const BALL::ChargeRuleProcessor&)' is deprecated [-Wdeprecated-copy]
  533 |       charge_rule_processor_ = ChargeRuleProcessor(inifile);
      |                                                           ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DIALOGS/dockDialog.h:22,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/dockDialog.C:16:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/chargeRuleProcessor.h:43:3: note: because 'BALL::ChargeRuleProcessor' has user-provided 'BALL::ChargeRuleProcessor::ChargeRuleProcessor(const BALL::ChargeRuleProcessor&)'
   43 |   ChargeRuleProcessor(const ChargeRuleProcessor& rule_processor);
      |   ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/dockDialog.C:549:59: warning: implicitly-declared 'BALL::RadiusRuleProcessor& BALL::RadiusRuleProcessor::operator=(const BALL::RadiusRuleProcessor&)' is deprecated [-Wdeprecated-copy]
  549 |       radius_rule_processor_ = RadiusRuleProcessor(inifile);
      |                                                           ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DIALOGS/dockDialog.h:18,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/dockDialog.C:16:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/radiusRuleProcessor.h:43:3: note: because 'BALL::RadiusRuleProcessor' has user-provided 'BALL::RadiusRuleProcessor::RadiusRuleProcessor(const BALL::RadiusRuleProcessor&)'
   43 |   RadiusRuleProcessor(const RadiusRuleProcessor& rule_processor);
      |   ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/dockDialog.C: In member function 'void BALL::VIEW::DockDialog::okPressed()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/dockDialog.C:763:52: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::AtomContainer, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomContainerIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::AtomContainer, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomContainerIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::AtomContainer, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomContainerIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  763 |    for (it = docking_partner1_->beginAtomContainer(); +it; ++it)
      |                                                    ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/expressionPredicate.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/expressionTree.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/expressionParser.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/expression.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/ruleEvaluator.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/ruleProcessor.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/radiusRuleProcessor.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DIALOGS/dockDialog.h:18,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/dockDialog.C:16:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::AtomContainer, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomContainerIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::AtomContainer; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomContainerIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::AtomContainer, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomContainerIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::AtomContainer, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomContainerIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::AtomContainer, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomContainerIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::AtomContainer, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomContainerIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::AtomContainer, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomContainerIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::AtomContainer, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomContainerIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::AtomContainer, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomContainerIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::AtomContainer; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomContainerIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/dockDialog.C: In member function 'void BALL::VIEW::DockDialog::okPressed()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/dockDialog.C:763:52: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::AtomContainer, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomContainerIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::AtomContainer, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomContainerIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::AtomContainer, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomContainerIteratorTraits>&)' first required here
  763 |    for (it = docking_partner1_->beginAtomContainer(); +it; ++it)
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/dockDialog.C:767:52: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::AtomContainer, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomContainerIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::AtomContainer, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomContainerIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::AtomContainer, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomContainerIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  767 |    for (it = docking_partner2_->beginAtomContainer(); +it; ++it)
      |                                                    ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/expressionPredicate.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/expressionTree.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/expressionParser.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/expression.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/ruleEvaluator.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/ruleProcessor.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/radiusRuleProcessor.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DIALOGS/dockDialog.h:18,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/dockDialog.C:16:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::AtomContainer, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomContainerIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::AtomContainer; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomContainerIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 75%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/dockProgressDialog.C.o
/usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/dockProgressDialog.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/dockProgressDialog.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/dockingAlgorithm.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DIALOGS/dockProgressDialog.h:18,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/dockProgressDialog.C:4:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DIALOGS/dockProgressDialog.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/dockProgressDialog.C:4:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/dockingAlgorithm.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DIALOGS/dockProgressDialog.h:18,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/dockProgressDialog.C:4:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DIALOGS/dockProgressDialog.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/dockProgressDialog.C:4:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/dockingAlgorithm.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DIALOGS/dockProgressDialog.h:18,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/dockProgressDialog.C:4:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DIALOGS/dockProgressDialog.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/dockProgressDialog.C:4:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 75%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/dockResultDialog.C.o
/usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/dockResultDialog.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/dockResultDialog.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/assignBondOrderProcessor.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DIALOGS/assignBondOrderConfigurationDialog.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/molecularStructure.h:37,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/dockResultDialog.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/expressionPredicate.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/expressionTree.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/expressionParser.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/expression.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/ruleEvaluator.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/ruleProcessor.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/radiusRuleProcessor.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DIALOGS/dockDialog.h:18,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/dockingController.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DIALOGS/dockResultDialog.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/dockResultDialog.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/assignBondOrderProcessor.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DIALOGS/assignBondOrderConfigurationDialog.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/molecularStructure.h:37,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/dockResultDialog.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/expressionPredicate.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/expressionTree.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/expressionParser.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/expression.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/ruleEvaluator.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/ruleProcessor.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/radiusRuleProcessor.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DIALOGS/dockDialog.h:18,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/dockingController.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DIALOGS/dockResultDialog.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/dockResultDialog.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/assignBondOrderProcessor.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DIALOGS/assignBondOrderConfigurationDialog.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/molecularStructure.h:37,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/dockResultDialog.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/expressionPredicate.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/expressionTree.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/expressionParser.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/expression.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/ruleEvaluator.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/ruleProcessor.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/radiusRuleProcessor.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DIALOGS/dockDialog.h:18,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/dockingController.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DIALOGS/dockResultDialog.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/dockResultDialog.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/embeddable.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/modularWidget.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/dockingController.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DIALOGS/dockResultDialog.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/dockResultDialog.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94ParametersBase::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:43:3: note: in expansion of macro 'BALL_CREATE'
   43 |   BALL_CREATE(MMFF94ParametersBase)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/molecularStructure.h:57,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/dockResultDialog.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/embeddable.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/modularWidget.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/dockingController.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DIALOGS/dockResultDialog.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/dockResultDialog.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:3: note: in expansion of macro 'BALL_CREATE'
  217 |   BALL_CREATE(MMFF94StretchParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/molecularStructure.h:57,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/dockResultDialog.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:226:34: note: because 'BALL::MMFF94StretchParameters' has user-provided 'const BALL::MMFF94StretchParameters& BALL::MMFF94StretchParameters::operator=(const BALL::MMFF94StretchParameters&)'
  226 |   const MMFF94StretchParameters& operator = (const MMFF94StretchParameters& param)
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:185:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  185 |  class BALL_EXPORT MMFF94StretchParameters:
      |                    ^~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/embeddable.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/modularWidget.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/dockingController.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DIALOGS/dockResultDialog.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/dockResultDialog.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:3: note: in expansion of macro 'BALL_CREATE'
  217 |   BALL_CREATE(MMFF94StretchParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94BendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:3: note: in expansion of macro 'BALL_CREATE'
  271 |   BALL_CREATE(MMFF94BendParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/molecularStructure.h:57,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/dockResultDialog.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:280:31: note: because 'BALL::MMFF94BendParameters' has user-provided 'const BALL::MMFF94BendParameters& BALL::MMFF94BendParameters::operator=(const BALL::MMFF94BendParameters&)'
  280 |   const MMFF94BendParameters& operator = (const MMFF94BendParameters& param)
      |                               ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:263:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  263 |  class BALL_EXPORT MMFF94BendParameters
      |                    ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/embeddable.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/modularWidget.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/dockingController.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DIALOGS/dockResultDialog.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/dockResultDialog.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94BendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:3: note: in expansion of macro 'BALL_CREATE'
  271 |   BALL_CREATE(MMFF94BendParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:3: note: in expansion of macro 'BALL_CREATE'
  318 |   BALL_CREATE(MMFF94StretchBendParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/molecularStructure.h:57,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/dockResultDialog.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:327:38: note: because 'BALL::MMFF94StretchBendParameters' has user-provided 'const BALL::MMFF94StretchBendParameters& BALL::MMFF94StretchBendParameters::operator=(const BALL::MMFF94StretchBendParameters&)'
  327 |   const MMFF94StretchBendParameters& operator = (const MMFF94StretchBendParameters& param)
      |                                      ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:310:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  310 |  class BALL_EXPORT MMFF94StretchBendParameters
      |                    ^~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/embeddable.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/modularWidget.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/dockingController.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DIALOGS/dockResultDialog.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/dockResultDialog.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:3: note: in expansion of macro 'BALL_CREATE'
  318 |   BALL_CREATE(MMFF94StretchBendParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:3: note: in expansion of macro 'BALL_CREATE'
  374 |   BALL_CREATE(MMFF94TorsionParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/molecularStructure.h:57,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/dockResultDialog.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:383:34: note: because 'BALL::MMFF94TorsionParameters' has user-provided 'const BALL::MMFF94TorsionParameters& BALL::MMFF94TorsionParameters::operator=(const BALL::MMFF94TorsionParameters&)'
  383 |   const MMFF94TorsionParameters& operator = (const MMFF94TorsionParameters& param)
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:366:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  366 |  class BALL_EXPORT MMFF94TorsionParameters
      |                    ^~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/embeddable.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/modularWidget.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/dockingController.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DIALOGS/dockResultDialog.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/dockResultDialog.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:3: note: in expansion of macro 'BALL_CREATE'
  374 |   BALL_CREATE(MMFF94TorsionParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:3: note: in expansion of macro 'BALL_CREATE'
  422 |   BALL_CREATE(MMFF94PlaneParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/molecularStructure.h:57,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/dockResultDialog.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:431:32: note: because 'BALL::MMFF94PlaneParameters' has user-provided 'const BALL::MMFF94PlaneParameters& BALL::MMFF94PlaneParameters::operator=(const BALL::MMFF94PlaneParameters&)'
  431 |   const MMFF94PlaneParameters& operator = (const MMFF94PlaneParameters& param)
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:414:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  414 |  class BALL_EXPORT MMFF94PlaneParameters
      |                    ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/embeddable.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/modularWidget.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/dockingController.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DIALOGS/dockResultDialog.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/dockResultDialog.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:3: note: in expansion of macro 'BALL_CREATE'
  422 |   BALL_CREATE(MMFF94PlaneParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:3: note: in expansion of macro 'BALL_CREATE'
  473 |   BALL_CREATE(MMFF94VDWParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/molecularStructure.h:57,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/dockResultDialog.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:482:30: note: because 'BALL::MMFF94VDWParameters' has user-provided 'const BALL::MMFF94VDWParameters& BALL::MMFF94VDWParameters::operator=(const BALL::MMFF94VDWParameters&)'
  482 |   const MMFF94VDWParameters& operator = (const MMFF94VDWParameters& param)
      |                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:458:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  458 |  class BALL_EXPORT MMFF94VDWParameters
      |                    ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/embeddable.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/modularWidget.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/dockingController.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DIALOGS/dockResultDialog.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/dockResultDialog.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:3: note: in expansion of macro 'BALL_CREATE'
  473 |   BALL_CREATE(MMFF94VDWParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94ESParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:3: note: in expansion of macro 'BALL_CREATE'
  530 |   BALL_CREATE(MMFF94ESParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/molecularStructure.h:57,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/dockResultDialog.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:539:29: note: because 'BALL::MMFF94ESParameters' has user-provided 'const BALL::MMFF94ESParameters& BALL::MMFF94ESParameters::operator=(const BALL::MMFF94ESParameters&)'
  539 |   const MMFF94ESParameters& operator = (const MMFF94ESParameters& param)
      |                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:525:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  525 |  class BALL_EXPORT MMFF94ESParameters
      |                    ^~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/embeddable.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/modularWidget.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/dockingController.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DIALOGS/dockResultDialog.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/dockResultDialog.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94ESParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:3: note: in expansion of macro 'BALL_CREATE'
  530 |   BALL_CREATE(MMFF94ESParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/dockResultDialog.C: In member function 'void BALL::VIEW::DockResultDialog::redock_()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/dockResultDialog.C:490:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::AtomContainer, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomContainerIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::AtomContainer, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomContainerIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::AtomContainer, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomContainerIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  490 |    it = redock_partner2_->beginAtomContainer();
      |                                              ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/expressionPredicate.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/expressionTree.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/expressionParser.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/expression.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/ruleEvaluator.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/ruleProcessor.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/radiusRuleProcessor.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DIALOGS/dockDialog.h:18,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/dockingController.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DIALOGS/dockResultDialog.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/dockResultDialog.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::AtomContainer, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomContainerIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::AtomContainer; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomContainerIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::AtomContainer, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomContainerIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::AtomContainer, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomContainerIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::AtomContainer, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomContainerIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::AtomContainer, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomContainerIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::AtomContainer, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomContainerIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::AtomContainer, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomContainerIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::AtomContainer, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomContainerIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::AtomContainer; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomContainerIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/dockResultDialog.C: In member function 'void BALL::VIEW::DockResultDialog::redock_()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/dockResultDialog.C:490:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::AtomContainer, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomContainerIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::AtomContainer, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomContainerIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::AtomContainer, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomContainerIteratorTraits>&)' first required here
  490 |    it = redock_partner2_->beginAtomContainer();
      |                                              ^
[ 75%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/downloadPDBFile.C.o
/usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/downloadPDBFile.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/downloadPDBFile.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/downloadPDBFile.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/downloadPDBFile.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/downloadPDBFile.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/downloadPDBFile.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/downloadPDBFile.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/downloadPDBFile.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/downloadPDBFile.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/message.h: In member function 'void BALL::VIEW::SceneMessage::setStage(BALL::VIEW::Stage)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/message.h:409:15: warning: implicitly-declared 'BALL::VIEW::Stage& BALL::VIEW::Stage::operator=(const BALL::VIEW::Stage&)' is deprecated [-Wdeprecated-copy]
  409 |    { stage_ = stage;}
      |               ^~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/message.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/downloadPDBFile.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/stage.h:301:4: note: because 'BALL::VIEW::Stage' has user-provided 'BALL::VIEW::Stage::Stage(const BALL::VIEW::Stage&)'
  301 |    Stage(const Stage& stage);
      |    ^~~~~
[ 75%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/downloadElectronDensity.C.o
/usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/downloadElectronDensity.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/downloadElectronDensity.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/downloadElectronDensity.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/downloadElectronDensity.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/downloadElectronDensity.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/downloadElectronDensity.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/downloadElectronDensity.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/downloadElectronDensity.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/downloadElectronDensity.C:14:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/message.h: In member function 'void BALL::VIEW::SceneMessage::setStage(BALL::VIEW::Stage)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/message.h:409:15: warning: implicitly-declared 'BALL::VIEW::Stage& BALL::VIEW::Stage::operator=(const BALL::VIEW::Stage&)' is deprecated [-Wdeprecated-copy]
  409 |    { stage_ = stage;}
      |               ^~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/message.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/downloadElectronDensity.C:14:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/stage.h:301:4: note: because 'BALL::VIEW::Stage' has user-provided 'BALL::VIEW::Stage::Stage(const BALL::VIEW::Stage&)'
  301 |    Stage(const Stage& stage);
      |    ^~~~~
[ 75%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/editSettings.C.o
/usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/editSettings.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/editSettings.C
[ 75%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/editSingleShortcut.C.o
/usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/editSingleShortcut.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/editSingleShortcut.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:49,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/editSingleShortcut.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/common.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/editSingleShortcut.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:49,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/editSingleShortcut.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/common.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/editSingleShortcut.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:49,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/editSingleShortcut.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/common.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/editSingleShortcut.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 75%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/displayProperties.C.o
/usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/displayProperties.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/displayProperties.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/displayProperties.C:15:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/message.h: In member function 'void BALL::VIEW::SceneMessage::setStage(BALL::VIEW::Stage)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/message.h:409:15: warning: implicitly-declared 'BALL::VIEW::Stage& BALL::VIEW::Stage::operator=(const BALL::VIEW::Stage&)' is deprecated [-Wdeprecated-copy]
  409 |    { stage_ = stage;}
      |               ^~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/message.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/displayProperties.C:15:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/stage.h:301:4: note: because 'BALL::VIEW::Stage' has user-provided 'BALL::VIEW::Stage::Stage(const BALL::VIEW::Stage&)'
  301 |    Stage(const Stage& stage);
      |    ^~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:49,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/displayProperties.C:16:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/timeStamp.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DATATYPE/colorRGBA.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DIALOGS/displayProperties.h:19,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/displayProperties.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:49,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/displayProperties.C:16:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/timeStamp.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DATATYPE/colorRGBA.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DIALOGS/displayProperties.h:19,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/displayProperties.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:49,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/displayProperties.C:16:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/timeStamp.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DATATYPE/colorRGBA.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DIALOGS/displayProperties.h:19,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/displayProperties.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/MODELS/colorProcessor.h:19,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/representation.h:34,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/stage.h:29,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/message.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/displayProperties.C:15:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h: In instantiation of 'BALL::Index BALL::HashGrid3<Item>::getIndex_(const BALL::HashGridBox3<Item>&) const [with Item = int; BALL::Index = int]':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:1667:20:   required from 'void BALL::HashGrid3<Item>::dump(std::ostream&, BALL::Size) const [with Item = int; std::ostream = std::basic_ostream<char>; BALL::Size = unsigned int]'
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:1625:7:   required from here
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:1726:46: warning: comparison of integer expressions of different signedness: 'int' and 'BALL::Size' {aka 'unsigned int'} [-Wsign-compare]
 1726 |   if ((&box < &box_[0]) || (&box - &box_[0]  >= getSize()))
      |                            ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~
[ 75%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/fieldLinesDialog.C.o
/usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/fieldLinesDialog.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/fieldLinesDialog.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:49,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/fieldLinesDialog.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/MODELS/fieldLineCreator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DIALOGS/fieldLinesDialog.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/fieldLinesDialog.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:49,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/fieldLinesDialog.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/MODELS/fieldLineCreator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DIALOGS/fieldLinesDialog.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/fieldLinesDialog.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:49,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/fieldLinesDialog.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/MODELS/fieldLineCreator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DIALOGS/fieldLinesDialog.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/fieldLinesDialog.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 75%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/FDPBDialog.C.o
/usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/FDPBDialog.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/FDPBDialog.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SOLVATION/poissonBoltzmann.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DIALOGS/FDPBDialog.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/FDPBDialog.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/regularData3D.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SOLVATION/poissonBoltzmann.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DIALOGS/FDPBDialog.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/FDPBDialog.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SOLVATION/poissonBoltzmann.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DIALOGS/FDPBDialog.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/FDPBDialog.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/regularData3D.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SOLVATION/poissonBoltzmann.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DIALOGS/FDPBDialog.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/FDPBDialog.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SOLVATION/poissonBoltzmann.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DIALOGS/FDPBDialog.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/FDPBDialog.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/regularData3D.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SOLVATION/poissonBoltzmann.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DIALOGS/FDPBDialog.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/FDPBDialog.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/FDPBDialog.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/message.h: In member function 'void BALL::VIEW::SceneMessage::setStage(BALL::VIEW::Stage)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/message.h:409:15: warning: implicitly-declared 'BALL::VIEW::Stage& BALL::VIEW::Stage::operator=(const BALL::VIEW::Stage&)' is deprecated [-Wdeprecated-copy]
  409 |    { stage_ = stage;}
      |               ^~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/message.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/FDPBDialog.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/stage.h:301:4: note: because 'BALL::VIEW::Stage' has user-provided 'BALL::VIEW::Stage::Stage(const BALL::VIEW::Stage&)'
  301 |    Stage(const Stage& stage);
      |    ^~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/FDPBDialog.C: In member function 'bool BALL::VIEW::FDPBDialog::applyProcessors_()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/FDPBDialog.C:311:59: warning: implicitly-declared 'BALL::ChargeRuleProcessor& BALL::ChargeRuleProcessor::operator=(const BALL::ChargeRuleProcessor&)' is deprecated [-Wdeprecated-copy]
  311 |       charge_rule_processor_ = ChargeRuleProcessor(inifile);
      |                                                           ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DIALOGS/FDPBDialog.h:28,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/FDPBDialog.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/chargeRuleProcessor.h:43:3: note: because 'BALL::ChargeRuleProcessor' has user-provided 'BALL::ChargeRuleProcessor::ChargeRuleProcessor(const BALL::ChargeRuleProcessor&)'
   43 |   ChargeRuleProcessor(const ChargeRuleProcessor& rule_processor);
      |   ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/FDPBDialog.C:326:59: warning: implicitly-declared 'BALL::RadiusRuleProcessor& BALL::RadiusRuleProcessor::operator=(const BALL::RadiusRuleProcessor&)' is deprecated [-Wdeprecated-copy]
  326 |       radius_rule_processor_ = RadiusRuleProcessor(inifile);
      |                                                           ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DIALOGS/FDPBDialog.h:24,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/FDPBDialog.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/radiusRuleProcessor.h:43:3: note: because 'BALL::RadiusRuleProcessor' has user-provided 'BALL::RadiusRuleProcessor::RadiusRuleProcessor(const BALL::RadiusRuleProcessor&)'
   43 |   RadiusRuleProcessor(const RadiusRuleProcessor& rule_processor);
      |   ^~~~~~~~~~~~~~~~~~~
[ 75%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/generateCrystalDialog.C.o
/usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/generateCrystalDialog.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/generateCrystalDialog.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DIALOGS/generateCrystalDialog.h:18,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/generateCrystalDialog.C:4:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DIALOGS/generateCrystalDialog.h:18,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/generateCrystalDialog.C:4:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DIALOGS/generateCrystalDialog.h:18,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/generateCrystalDialog.C:4:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DIALOGS/generateCrystalDialog.h:18,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/generateCrystalDialog.C:4:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DIALOGS/generateCrystalDialog.h:18,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/generateCrystalDialog.C:4:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DIALOGS/generateCrystalDialog.h:18,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/generateCrystalDialog.C:4:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/generateCrystalDialog.C: In member function 'bool BALL::VIEW::GenerateCrystalDialog::initSpaceGroupList()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/generateCrystalDialog.C:80:39: warning: comparison of integer expressions of different signedness: 'int' and 'BALL::Size' {aka 'unsigned int'} [-Wsign-compare]
   80 |     if (space_group_combobox->count() != sg_list_.getNumberOfKeys())
      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 75%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/gridVisualizationDialog.C.o
/usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/gridVisualizationDialog.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/gridVisualizationDialog.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:49,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/gridVisualizationDialog.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/timeStamp.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DATATYPE/colorRGBA.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DIALOGS/gridVisualizationDialog.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/gridVisualizationDialog.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:49,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/gridVisualizationDialog.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/timeStamp.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DATATYPE/colorRGBA.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DIALOGS/gridVisualizationDialog.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/gridVisualizationDialog.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:49,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/gridVisualizationDialog.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/timeStamp.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DATATYPE/colorRGBA.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DIALOGS/gridVisualizationDialog.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/gridVisualizationDialog.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/gridVisualizationDialog.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/message.h: In member function 'void BALL::VIEW::SceneMessage::setStage(BALL::VIEW::Stage)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/message.h:409:15: warning: implicitly-declared 'BALL::VIEW::Stage& BALL::VIEW::Stage::operator=(const BALL::VIEW::Stage&)' is deprecated [-Wdeprecated-copy]
  409 |    { stage_ = stage;}
      |               ^~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/message.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/gridVisualizationDialog.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/stage.h:301:4: note: because 'BALL::VIEW::Stage' has user-provided 'BALL::VIEW::Stage::Stage(const BALL::VIEW::Stage&)'
  301 |    Stage(const Stage& stage);
      |    ^~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/gridVisualizationDialog.C:12:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor 'BALL::VIEW::FrameBufferFormat::FrameBufferFormat()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:53:38: warning: implicitly-declared 'constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)' is deprecated [-Wdeprecated-copy]
   53 |       pixelFormat(PixelFormat::RGB_32)
      |                                      ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/gridVisualizationDialog.C:12:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because 'BALL::VIEW::PixelFormat' has user-provided 'BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)'
  162 |    PixelFormat &operator=(const PixelFormat &f)
      |                 ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/gridVisualizationDialog.C:12:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor 'BALL::VIEW::FrameBufferFormat::FrameBufferFormat(BALL::Size, BALL::Size, const BALL::VIEW::PixelFormat&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:60:30: warning: implicitly-declared 'constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)' is deprecated [-Wdeprecated-copy]
   60 |       pixelFormat(pixelFormat)
      |                              ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/gridVisualizationDialog.C:12:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because 'BALL::VIEW::PixelFormat' has user-provided 'BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)'
  162 |    PixelFormat &operator=(const PixelFormat &f)
      |                 ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/gridVisualizationDialog.C:12:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor 'BALL::VIEW::FrameBufferFormat::FrameBufferFormat(BALL::Size, BALL::Size, BALL::Size, const BALL::VIEW::PixelFormat&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:69:30: warning: implicitly-declared 'constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)' is deprecated [-Wdeprecated-copy]
   69 |       pixelFormat(pixelFormat)
      |                              ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/gridVisualizationDialog.C:12:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because 'BALL::VIEW::PixelFormat' has user-provided 'BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)'
  162 |    PixelFormat &operator=(const PixelFormat &f)
      |                 ^~~~~~~~
[ 75%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/labelDialog.C.o
/usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/labelDialog.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/labelDialog.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DIALOGS/labelDialog.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/labelDialog.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/message.h: In member function 'void BALL::VIEW::SceneMessage::setStage(BALL::VIEW::Stage)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/message.h:409:15: warning: implicitly-declared 'BALL::VIEW::Stage& BALL::VIEW::Stage::operator=(const BALL::VIEW::Stage&)' is deprecated [-Wdeprecated-copy]
  409 |    { stage_ = stage;}
      |               ^~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/message.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DIALOGS/labelDialog.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/labelDialog.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/stage.h:301:4: note: because 'BALL::VIEW::Stage' has user-provided 'BALL::VIEW::Stage::Stage(const BALL::VIEW::Stage&)'
  301 |    Stage(const Stage& stage);
      |    ^~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/geometricProperties.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/MODELS/labelModel.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/labelDialog.C:12:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/stage.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/message.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DIALOGS/labelDialog.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/labelDialog.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/geometricProperties.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/MODELS/labelModel.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/labelDialog.C:12:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/stage.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/message.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DIALOGS/labelDialog.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/labelDialog.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/geometricProperties.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/MODELS/labelModel.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/labelDialog.C:12:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/stage.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/message.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DIALOGS/labelDialog.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/labelDialog.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 75%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/lightSettings.C.o
/usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/lightSettings.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/lightSettings.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/lightSettings.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor 'BALL::VIEW::FrameBufferFormat::FrameBufferFormat()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:53:38: warning: implicitly-declared 'constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)' is deprecated [-Wdeprecated-copy]
   53 |       pixelFormat(PixelFormat::RGB_32)
      |                                      ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/lightSettings.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because 'BALL::VIEW::PixelFormat' has user-provided 'BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)'
  162 |    PixelFormat &operator=(const PixelFormat &f)
      |                 ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/lightSettings.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor 'BALL::VIEW::FrameBufferFormat::FrameBufferFormat(BALL::Size, BALL::Size, const BALL::VIEW::PixelFormat&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:60:30: warning: implicitly-declared 'constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)' is deprecated [-Wdeprecated-copy]
   60 |       pixelFormat(pixelFormat)
      |                              ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/lightSettings.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because 'BALL::VIEW::PixelFormat' has user-provided 'BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)'
  162 |    PixelFormat &operator=(const PixelFormat &f)
      |                 ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/lightSettings.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor 'BALL::VIEW::FrameBufferFormat::FrameBufferFormat(BALL::Size, BALL::Size, BALL::Size, const BALL::VIEW::PixelFormat&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:69:30: warning: implicitly-declared 'constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)' is deprecated [-Wdeprecated-copy]
   69 |       pixelFormat(pixelFormat)
      |                              ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/lightSettings.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because 'BALL::VIEW::PixelFormat' has user-provided 'BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)'
  162 |    PixelFormat &operator=(const PixelFormat &f)
      |                 ^~~~~~~~
[ 75%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/mainControlPreferences.C.o
/usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/mainControlPreferences.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/mainControlPreferences.C
[ 75%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/materialSettings.C.o
/usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/materialSettings.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/materialSettings.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/materialSettings.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor 'BALL::VIEW::FrameBufferFormat::FrameBufferFormat()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:53:38: warning: implicitly-declared 'constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)' is deprecated [-Wdeprecated-copy]
   53 |       pixelFormat(PixelFormat::RGB_32)
      |                                      ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/materialSettings.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because 'BALL::VIEW::PixelFormat' has user-provided 'BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)'
  162 |    PixelFormat &operator=(const PixelFormat &f)
      |                 ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/materialSettings.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor 'BALL::VIEW::FrameBufferFormat::FrameBufferFormat(BALL::Size, BALL::Size, const BALL::VIEW::PixelFormat&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:60:30: warning: implicitly-declared 'constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)' is deprecated [-Wdeprecated-copy]
   60 |       pixelFormat(pixelFormat)
      |                              ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/materialSettings.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because 'BALL::VIEW::PixelFormat' has user-provided 'BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)'
  162 |    PixelFormat &operator=(const PixelFormat &f)
      |                 ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/materialSettings.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor 'BALL::VIEW::FrameBufferFormat::FrameBufferFormat(BALL::Size, BALL::Size, BALL::Size, const BALL::VIEW::PixelFormat&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:69:30: warning: implicitly-declared 'constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)' is deprecated [-Wdeprecated-copy]
   69 |       pixelFormat(pixelFormat)
      |                              ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/materialSettings.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because 'BALL::VIEW::PixelFormat' has user-provided 'BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)'
  162 |    PixelFormat &operator=(const PixelFormat &f)
      |                 ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/materialSettings.C: In member function 'virtual void BALL::VIEW::MaterialSettings::editAmbientColor()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/materialSettings.C:257:11: warning: variable 'color' set but not used [-Wunused-but-set-variable]
  257 |    QColor color = VIEW::chooseColor(ambient_color_label);
      |           ^~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/materialSettings.C: In member function 'virtual void BALL::VIEW::MaterialSettings::editSpecularityColor()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/materialSettings.C:265:11: warning: variable 'color' set but not used [-Wunused-but-set-variable]
  265 |    QColor color = VIEW::chooseColor(specularity_color_label);
      |           ^~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/materialSettings.C: In member function 'virtual void BALL::VIEW::MaterialSettings::editReflectivenessColor()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/materialSettings.C:273:11: warning: variable 'color' set but not used [-Wunused-but-set-variable]
  273 |    QColor color = VIEW::chooseColor(reflectiveness_color_label);
      |           ^~~~~
[ 75%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/minimizationDialog.C.o
/usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/minimizationDialog.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/minimizationDialog.C
[ 75%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/modelSettingsDialog.C.o
/usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/modelSettingsDialog.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/modelSettingsDialog.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/secondaryStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/MODELS/backboneModel.h:19,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/modelSettingsDialog.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/MODELS/modelProcessor.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DIALOGS/modelSettingsDialog.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/modelSettingsDialog.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/secondaryStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/MODELS/backboneModel.h:19,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/modelSettingsDialog.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/MODELS/modelProcessor.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DIALOGS/modelSettingsDialog.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/modelSettingsDialog.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/secondaryStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/MODELS/backboneModel.h:19,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/modelSettingsDialog.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/MODELS/modelProcessor.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DIALOGS/modelSettingsDialog.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/modelSettingsDialog.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/solventExcludedSurface.h:45,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/surfaceProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/MODELS/surfaceModel.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/modelSettingsDialog.C:12:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h: In instantiation of 'BALL::Index BALL::HashGrid3<Item>::getIndex_(const BALL::HashGridBox3<Item>&) const [with Item = int; BALL::Index = int]':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:1667:20:   required from 'void BALL::HashGrid3<Item>::dump(std::ostream&, BALL::Size) const [with Item = int; std::ostream = std::basic_ostream<char>; BALL::Size = unsigned int]'
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:1625:7:   required from here
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:1726:46: warning: comparison of integer expressions of different signedness: 'int' and 'BALL::Size' {aka 'unsigned int'} [-Wsign-compare]
 1726 |   if ((&box < &box_[0]) || (&box - &box_[0]  >= getSize()))
      |                            ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~
[ 75%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/modifyRepresentationDialog.C.o
/usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/modifyRepresentationDialog.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/modifyRepresentationDialog.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/modifyRepresentationDialog.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/message.h: In member function 'void BALL::VIEW::SceneMessage::setStage(BALL::VIEW::Stage)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/message.h:409:15: warning: implicitly-declared 'BALL::VIEW::Stage& BALL::VIEW::Stage::operator=(const BALL::VIEW::Stage&)' is deprecated [-Wdeprecated-copy]
  409 |    { stage_ = stage;}
      |               ^~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/message.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/modifyRepresentationDialog.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/stage.h:301:4: note: because 'BALL::VIEW::Stage' has user-provided 'BALL::VIEW::Stage::Stage(const BALL::VIEW::Stage&)'
  301 |    Stage(const Stage& stage);
      |    ^~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:49,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/modifyRepresentationDialog.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/timeStamp.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DATATYPE/colorRGBA.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DIALOGS/modifyRepresentationDialog.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/modifyRepresentationDialog.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:49,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/modifyRepresentationDialog.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/timeStamp.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DATATYPE/colorRGBA.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DIALOGS/modifyRepresentationDialog.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/modifyRepresentationDialog.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:49,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/modifyRepresentationDialog.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/timeStamp.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DATATYPE/colorRGBA.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DIALOGS/modifyRepresentationDialog.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/modifyRepresentationDialog.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/modifyRepresentationDialog.C:21:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/modifyRepresentationDialog.C: In member function 'void BALL::VIEW::ModifyRepresentationDialog::calculateIncludedVertices_(std::vector<bool>&, const BALL::VIEW::Mesh&, BALL::HashSet<const BALL::Composite*>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:64:49: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   64 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/modifyRepresentationDialog.C:710:6: note: in expansion of macro 'BALL_FOREACH_ATOM'
  710 |      BALL_FOREACH_ATOM(*acont, ait)
      |      ^~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/timeStamp.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DATATYPE/colorRGBA.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DIALOGS/modifyRepresentationDialog.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/modifyRepresentationDialog.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/MODELS/colorProcessor.h:19,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/representation.h:34,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DIALOGS/modifyRepresentationDialog.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/modifyRepresentationDialog.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h: In instantiation of 'BALL::Index BALL::HashGrid3<Item>::getIndex_(const BALL::HashGridBox3<Item>&) const [with Item = const BALL::Atom*; BALL::Index = int]':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:1516:17:   required from 'bool BALL::HashGrid3<Item>::getIndices(const BALL::HashGridBox3<Item>&, BALL::Position&, BALL::Position&, BALL::Position&) const [with Item = const BALL::Atom*; BALL::Position = unsigned int]'
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/modifyRepresentationDialog.C:776:38:   required from here
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:1726:46: warning: comparison of integer expressions of different signedness: 'int' and 'BALL::Size' {aka 'unsigned int'} [-Wsign-compare]
 1726 |   if ((&box < &box_[0]) || (&box - &box_[0]  >= getSize()))
      |                            ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~
[ 75%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/molecularDynamicsDialog.C.o
/usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/molecularDynamicsDialog.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/molecularDynamicsDialog.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:49,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/molecularDynamicsDialog.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/common.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/molecularDynamicsDialog.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:49,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/molecularDynamicsDialog.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/common.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/molecularDynamicsDialog.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:49,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/molecularDynamicsDialog.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/common.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/molecularDynamicsDialog.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 75%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/molecularFileDialog.C.o
/usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/molecularFileDialog.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/molecularFileDialog.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:49,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/molecularFileDialog.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/common.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DIALOGS/molecularFileDialog.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/molecularFileDialog.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:49,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/molecularFileDialog.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/common.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DIALOGS/molecularFileDialog.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/molecularFileDialog.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:49,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/molecularFileDialog.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/common.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DIALOGS/molecularFileDialog.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/molecularFileDialog.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/molecularFileDialog.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/message.h: In member function 'void BALL::VIEW::SceneMessage::setStage(BALL::VIEW::Stage)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/message.h:409:15: warning: implicitly-declared 'BALL::VIEW::Stage& BALL::VIEW::Stage::operator=(const BALL::VIEW::Stage&)' is deprecated [-Wdeprecated-copy]
  409 |    { stage_ = stage;}
      |               ^~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/message.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/molecularFileDialog.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/stage.h:301:4: note: because 'BALL::VIEW::Stage' has user-provided 'BALL::VIEW::Stage::Stage(const BALL::VIEW::Stage&)'
  301 |    Stage(const Stage& stage);
      |    ^~~~~
[ 75%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/MMFF94ConfigurationDialog.C.o
/usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/MMFF94ConfigurationDialog.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/MMFF94ConfigurationDialog.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceField.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/MMFF94ConfigurationDialog.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/common.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/MMFF94ConfigurationDialog.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceField.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/MMFF94ConfigurationDialog.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/common.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/MMFF94ConfigurationDialog.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceField.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/MMFF94ConfigurationDialog.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/common.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/MMFF94ConfigurationDialog.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/stringHashMap.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/INIFile.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/preferencesEntry.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DIALOGS/MMFF94ConfigurationDialog.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/MMFF94ConfigurationDialog.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94ParametersBase::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:43:3: note: in expansion of macro 'BALL_CREATE'
   43 |   BALL_CREATE(MMFF94ParametersBase)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/MMFF94ConfigurationDialog.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/stringHashMap.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/INIFile.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/preferencesEntry.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DIALOGS/MMFF94ConfigurationDialog.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/MMFF94ConfigurationDialog.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:3: note: in expansion of macro 'BALL_CREATE'
  217 |   BALL_CREATE(MMFF94StretchParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/MMFF94ConfigurationDialog.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:226:34: note: because 'BALL::MMFF94StretchParameters' has user-provided 'const BALL::MMFF94StretchParameters& BALL::MMFF94StretchParameters::operator=(const BALL::MMFF94StretchParameters&)'
  226 |   const MMFF94StretchParameters& operator = (const MMFF94StretchParameters& param)
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:185:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  185 |  class BALL_EXPORT MMFF94StretchParameters:
      |                    ^~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/stringHashMap.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/INIFile.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/preferencesEntry.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DIALOGS/MMFF94ConfigurationDialog.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/MMFF94ConfigurationDialog.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:3: note: in expansion of macro 'BALL_CREATE'
  217 |   BALL_CREATE(MMFF94StretchParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94BendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:3: note: in expansion of macro 'BALL_CREATE'
  271 |   BALL_CREATE(MMFF94BendParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/MMFF94ConfigurationDialog.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:280:31: note: because 'BALL::MMFF94BendParameters' has user-provided 'const BALL::MMFF94BendParameters& BALL::MMFF94BendParameters::operator=(const BALL::MMFF94BendParameters&)'
  280 |   const MMFF94BendParameters& operator = (const MMFF94BendParameters& param)
      |                               ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:263:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  263 |  class BALL_EXPORT MMFF94BendParameters
      |                    ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/stringHashMap.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/INIFile.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/preferencesEntry.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DIALOGS/MMFF94ConfigurationDialog.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/MMFF94ConfigurationDialog.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94BendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:3: note: in expansion of macro 'BALL_CREATE'
  271 |   BALL_CREATE(MMFF94BendParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:3: note: in expansion of macro 'BALL_CREATE'
  318 |   BALL_CREATE(MMFF94StretchBendParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/MMFF94ConfigurationDialog.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:327:38: note: because 'BALL::MMFF94StretchBendParameters' has user-provided 'const BALL::MMFF94StretchBendParameters& BALL::MMFF94StretchBendParameters::operator=(const BALL::MMFF94StretchBendParameters&)'
  327 |   const MMFF94StretchBendParameters& operator = (const MMFF94StretchBendParameters& param)
      |                                      ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:310:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  310 |  class BALL_EXPORT MMFF94StretchBendParameters
      |                    ^~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/stringHashMap.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/INIFile.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/preferencesEntry.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DIALOGS/MMFF94ConfigurationDialog.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/MMFF94ConfigurationDialog.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:3: note: in expansion of macro 'BALL_CREATE'
  318 |   BALL_CREATE(MMFF94StretchBendParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:3: note: in expansion of macro 'BALL_CREATE'
  374 |   BALL_CREATE(MMFF94TorsionParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/MMFF94ConfigurationDialog.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:383:34: note: because 'BALL::MMFF94TorsionParameters' has user-provided 'const BALL::MMFF94TorsionParameters& BALL::MMFF94TorsionParameters::operator=(const BALL::MMFF94TorsionParameters&)'
  383 |   const MMFF94TorsionParameters& operator = (const MMFF94TorsionParameters& param)
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:366:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  366 |  class BALL_EXPORT MMFF94TorsionParameters
      |                    ^~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/stringHashMap.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/INIFile.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/preferencesEntry.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DIALOGS/MMFF94ConfigurationDialog.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/MMFF94ConfigurationDialog.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:3: note: in expansion of macro 'BALL_CREATE'
  374 |   BALL_CREATE(MMFF94TorsionParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:3: note: in expansion of macro 'BALL_CREATE'
  422 |   BALL_CREATE(MMFF94PlaneParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/MMFF94ConfigurationDialog.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:431:32: note: because 'BALL::MMFF94PlaneParameters' has user-provided 'const BALL::MMFF94PlaneParameters& BALL::MMFF94PlaneParameters::operator=(const BALL::MMFF94PlaneParameters&)'
  431 |   const MMFF94PlaneParameters& operator = (const MMFF94PlaneParameters& param)
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:414:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  414 |  class BALL_EXPORT MMFF94PlaneParameters
      |                    ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/stringHashMap.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/INIFile.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/preferencesEntry.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DIALOGS/MMFF94ConfigurationDialog.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/MMFF94ConfigurationDialog.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:3: note: in expansion of macro 'BALL_CREATE'
  422 |   BALL_CREATE(MMFF94PlaneParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:3: note: in expansion of macro 'BALL_CREATE'
  473 |   BALL_CREATE(MMFF94VDWParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/MMFF94ConfigurationDialog.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:482:30: note: because 'BALL::MMFF94VDWParameters' has user-provided 'const BALL::MMFF94VDWParameters& BALL::MMFF94VDWParameters::operator=(const BALL::MMFF94VDWParameters&)'
  482 |   const MMFF94VDWParameters& operator = (const MMFF94VDWParameters& param)
      |                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:458:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  458 |  class BALL_EXPORT MMFF94VDWParameters
      |                    ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/stringHashMap.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/INIFile.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/preferencesEntry.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DIALOGS/MMFF94ConfigurationDialog.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/MMFF94ConfigurationDialog.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:3: note: in expansion of macro 'BALL_CREATE'
  473 |   BALL_CREATE(MMFF94VDWParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94ESParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:3: note: in expansion of macro 'BALL_CREATE'
  530 |   BALL_CREATE(MMFF94ESParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/MMFF94ConfigurationDialog.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:539:29: note: because 'BALL::MMFF94ESParameters' has user-provided 'const BALL::MMFF94ESParameters& BALL::MMFF94ESParameters::operator=(const BALL::MMFF94ESParameters&)'
  539 |   const MMFF94ESParameters& operator = (const MMFF94ESParameters& param)
      |                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:525:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  525 |  class BALL_EXPORT MMFF94ESParameters
      |                    ^~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/stringHashMap.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/INIFile.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/preferencesEntry.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DIALOGS/MMFF94ConfigurationDialog.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/MMFF94ConfigurationDialog.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94ESParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:3: note: in expansion of macro 'BALL_CREATE'
  530 |   BALL_CREATE(MMFF94ESParameters)
      |   ^~~~~~~~~~~
[ 75%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/networkPreferences.C.o
/usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/networkPreferences.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/networkPreferences.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:49,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/networkPreferences.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/common.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/networkPreferences.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:49,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/networkPreferences.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/common.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/networkPreferences.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:49,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/networkPreferences.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/common.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/networkPreferences.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 78%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/openSavePreferences.C.o
/usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/openSavePreferences.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/openSavePreferences.C
[ 78%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/parsedFunctionDialog.C.o
/usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/parsedFunctionDialog.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/parsedFunctionDialog.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/parsedFunctionDialog.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor 'BALL::VIEW::FrameBufferFormat::FrameBufferFormat()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:53:38: warning: implicitly-declared 'constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)' is deprecated [-Wdeprecated-copy]
   53 |       pixelFormat(PixelFormat::RGB_32)
      |                                      ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/parsedFunctionDialog.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because 'BALL::VIEW::PixelFormat' has user-provided 'BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)'
  162 |    PixelFormat &operator=(const PixelFormat &f)
      |                 ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/parsedFunctionDialog.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor 'BALL::VIEW::FrameBufferFormat::FrameBufferFormat(BALL::Size, BALL::Size, const BALL::VIEW::PixelFormat&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:60:30: warning: implicitly-declared 'constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)' is deprecated [-Wdeprecated-copy]
   60 |       pixelFormat(pixelFormat)
      |                              ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/parsedFunctionDialog.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because 'BALL::VIEW::PixelFormat' has user-provided 'BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)'
  162 |    PixelFormat &operator=(const PixelFormat &f)
      |                 ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/parsedFunctionDialog.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor 'BALL::VIEW::FrameBufferFormat::FrameBufferFormat(BALL::Size, BALL::Size, BALL::Size, const BALL::VIEW::PixelFormat&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:69:30: warning: implicitly-declared 'constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)' is deprecated [-Wdeprecated-copy]
   69 |       pixelFormat(pixelFormat)
      |                              ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/parsedFunctionDialog.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because 'BALL::VIEW::PixelFormat' has user-provided 'BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)'
  162 |    PixelFormat &operator=(const PixelFormat &f)
      |                 ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:49,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/parsedFunctionDialog.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/representation.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/RENDERERS/renderer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/RENDERERS/glRenderer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/parsedFunctionDialog.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:49,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/parsedFunctionDialog.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/representation.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/RENDERERS/renderer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/RENDERERS/glRenderer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/parsedFunctionDialog.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:49,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/parsedFunctionDialog.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/representation.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/RENDERERS/renderer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/RENDERERS/glRenderer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/parsedFunctionDialog.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 78%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/peptideDialog.C.o
/usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/peptideDialog.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/peptideDialog.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chain.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chainIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/protein.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/peptides.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/peptideBuilder.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DIALOGS/peptideDialog.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/peptideDialog.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chain.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chainIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/protein.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/peptides.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/peptideBuilder.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DIALOGS/peptideDialog.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/peptideDialog.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chain.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chainIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/protein.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/peptides.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/peptideBuilder.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DIALOGS/peptideDialog.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/peptideDialog.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chain.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chainIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/protein.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/peptides.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/peptideBuilder.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DIALOGS/peptideDialog.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/peptideDialog.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chain.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chainIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/protein.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/peptides.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/peptideBuilder.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DIALOGS/peptideDialog.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/peptideDialog.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chain.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chainIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/protein.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/peptides.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/peptideBuilder.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DIALOGS/peptideDialog.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/peptideDialog.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 78%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/pluginDialog.C.o
/usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/pluginDialog.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/pluginDialog.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/pluginDialog.C:4:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor 'BALL::VIEW::FrameBufferFormat::FrameBufferFormat()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:53:38: warning: implicitly-declared 'constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)' is deprecated [-Wdeprecated-copy]
   53 |       pixelFormat(PixelFormat::RGB_32)
      |                                      ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/pluginDialog.C:4:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because 'BALL::VIEW::PixelFormat' has user-provided 'BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)'
  162 |    PixelFormat &operator=(const PixelFormat &f)
      |                 ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/pluginDialog.C:4:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor 'BALL::VIEW::FrameBufferFormat::FrameBufferFormat(BALL::Size, BALL::Size, const BALL::VIEW::PixelFormat&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:60:30: warning: implicitly-declared 'constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)' is deprecated [-Wdeprecated-copy]
   60 |       pixelFormat(pixelFormat)
      |                              ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/pluginDialog.C:4:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because 'BALL::VIEW::PixelFormat' has user-provided 'BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)'
  162 |    PixelFormat &operator=(const PixelFormat &f)
      |                 ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/pluginDialog.C:4:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor 'BALL::VIEW::FrameBufferFormat::FrameBufferFormat(BALL::Size, BALL::Size, BALL::Size, const BALL::VIEW::PixelFormat&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:69:30: warning: implicitly-declared 'constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)' is deprecated [-Wdeprecated-copy]
   69 |       pixelFormat(pixelFormat)
      |                              ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/pluginDialog.C:4:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because 'BALL::VIEW::PixelFormat' has user-provided 'BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)'
  162 |    PixelFormat &operator=(const PixelFormat &f)
      |                 ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:49,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/pluginDialog.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/representation.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/RENDERERS/renderer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/RENDERERS/glRenderer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/pluginDialog.C:4:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:49,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/pluginDialog.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/representation.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/RENDERERS/renderer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/RENDERERS/glRenderer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/pluginDialog.C:4:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:49,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/pluginDialog.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/representation.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/RENDERERS/renderer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/RENDERERS/glRenderer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/pluginDialog.C:4:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 78%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/preferences.C.o
/usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/preferences.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/preferences.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:49,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/preferences.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/representation.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/representationManager.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/preferences.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:49,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/preferences.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/representation.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/representationManager.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/preferences.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:49,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/preferences.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/representation.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/representationManager.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/preferences.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 78%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/exportGeometryDialog.C.o
/usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/exportGeometryDialog.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/exportGeometryDialog.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:49,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/exportGeometryDialog.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/representation.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/clippingPlane.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DIALOGS/exportGeometryDialog.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/exportGeometryDialog.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:49,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/exportGeometryDialog.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/representation.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/clippingPlane.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DIALOGS/exportGeometryDialog.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/exportGeometryDialog.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:49,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/exportGeometryDialog.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/representation.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/clippingPlane.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DIALOGS/exportGeometryDialog.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/exportGeometryDialog.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/exportGeometryDialog.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/message.h: In member function 'void BALL::VIEW::SceneMessage::setStage(BALL::VIEW::Stage)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/message.h:409:15: warning: implicitly-declared 'BALL::VIEW::Stage& BALL::VIEW::Stage::operator=(const BALL::VIEW::Stage&)' is deprecated [-Wdeprecated-copy]
  409 |    { stage_ = stage;}
      |               ^~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/message.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/exportGeometryDialog.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/stage.h:301:4: note: because 'BALL::VIEW::Stage' has user-provided 'BALL::VIEW::Stage::Stage(const BALL::VIEW::Stage&)'
  301 |    Stage(const Stage& stage);
      |    ^~~~~
[ 78%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/PTEDialog.C.o
/usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/PTEDialog.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/PTEDialog.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/PTEDialog.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor 'BALL::VIEW::FrameBufferFormat::FrameBufferFormat()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:53:38: warning: implicitly-declared 'constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)' is deprecated [-Wdeprecated-copy]
   53 |       pixelFormat(PixelFormat::RGB_32)
      |                                      ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/PTEDialog.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because 'BALL::VIEW::PixelFormat' has user-provided 'BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)'
  162 |    PixelFormat &operator=(const PixelFormat &f)
      |                 ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/PTEDialog.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor 'BALL::VIEW::FrameBufferFormat::FrameBufferFormat(BALL::Size, BALL::Size, const BALL::VIEW::PixelFormat&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:60:30: warning: implicitly-declared 'constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)' is deprecated [-Wdeprecated-copy]
   60 |       pixelFormat(pixelFormat)
      |                              ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/PTEDialog.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because 'BALL::VIEW::PixelFormat' has user-provided 'BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)'
  162 |    PixelFormat &operator=(const PixelFormat &f)
      |                 ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/PTEDialog.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor 'BALL::VIEW::FrameBufferFormat::FrameBufferFormat(BALL::Size, BALL::Size, BALL::Size, const BALL::VIEW::PixelFormat&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:69:30: warning: implicitly-declared 'constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)' is deprecated [-Wdeprecated-copy]
   69 |       pixelFormat(pixelFormat)
      |                              ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/PTEDialog.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because 'BALL::VIEW::PixelFormat' has user-provided 'BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)'
  162 |    PixelFormat &operator=(const PixelFormat &f)
      |                 ^~~~~~~~
[ 78%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/pubchemDialog.C.o
/usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/pubchemDialog.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/pubchemDialog.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/smilesParser.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DIALOGS/pubchemDialog.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/pubchemDialog.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/smilesParser.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DIALOGS/pubchemDialog.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/pubchemDialog.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/smilesParser.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DIALOGS/pubchemDialog.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/pubchemDialog.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/smilesParser.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DIALOGS/pubchemDialog.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/pubchemDialog.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/smilesParser.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DIALOGS/pubchemDialog.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/pubchemDialog.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/smilesParser.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DIALOGS/pubchemDialog.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/pubchemDialog.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 78%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/raytraceableContourSurfaceDialog.C.o
/usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/raytraceableContourSurfaceDialog.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/raytraceableContourSurfaceDialog.C
[ 78%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/setCamera.C.o
/usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/setCamera.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/setCamera.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/setCamera.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor 'BALL::VIEW::FrameBufferFormat::FrameBufferFormat()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:53:38: warning: implicitly-declared 'constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)' is deprecated [-Wdeprecated-copy]
   53 |       pixelFormat(PixelFormat::RGB_32)
      |                                      ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/setCamera.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because 'BALL::VIEW::PixelFormat' has user-provided 'BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)'
  162 |    PixelFormat &operator=(const PixelFormat &f)
      |                 ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/setCamera.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor 'BALL::VIEW::FrameBufferFormat::FrameBufferFormat(BALL::Size, BALL::Size, const BALL::VIEW::PixelFormat&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:60:30: warning: implicitly-declared 'constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)' is deprecated [-Wdeprecated-copy]
   60 |       pixelFormat(pixelFormat)
      |                              ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/setCamera.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because 'BALL::VIEW::PixelFormat' has user-provided 'BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)'
  162 |    PixelFormat &operator=(const PixelFormat &f)
      |                 ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/setCamera.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor 'BALL::VIEW::FrameBufferFormat::FrameBufferFormat(BALL::Size, BALL::Size, BALL::Size, const BALL::VIEW::PixelFormat&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:69:30: warning: implicitly-declared 'constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)' is deprecated [-Wdeprecated-copy]
   69 |       pixelFormat(pixelFormat)
      |                              ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/setCamera.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because 'BALL::VIEW::PixelFormat' has user-provided 'BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)'
  162 |    PixelFormat &operator=(const PixelFormat &f)
      |                 ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:49,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/setCamera.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/representation.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/RENDERERS/renderer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/RENDERERS/glRenderer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/setCamera.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:49,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/setCamera.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/representation.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/RENDERERS/renderer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/RENDERERS/glRenderer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/setCamera.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:49,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/setCamera.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/representation.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/RENDERERS/renderer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/RENDERERS/glRenderer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/setCamera.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 78%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/setClippingPlane.C.o
/usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/setClippingPlane.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/setClippingPlane.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:49,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/setClippingPlane.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/representation.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/clippingPlane.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DIALOGS/setClippingPlane.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/setClippingPlane.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:49,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/setClippingPlane.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/representation.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/clippingPlane.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DIALOGS/setClippingPlane.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/setClippingPlane.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:49,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/setClippingPlane.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/representation.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/clippingPlane.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DIALOGS/setClippingPlane.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/setClippingPlane.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 78%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/serverPreferences.C.o
/usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/serverPreferences.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/serverPreferences.C
[ 78%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/shortcutDialog.C.o
/usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/shortcutDialog.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/shortcutDialog.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:49,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/shortcutDialog.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/common.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/shortcutTableView.h:5,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include/BALL/VIEW/UIC/ui_shortcutDialog.h:24,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DIALOGS/shortcutDialog.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/shortcutDialog.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:49,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/shortcutDialog.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/common.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/shortcutTableView.h:5,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include/BALL/VIEW/UIC/ui_shortcutDialog.h:24,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DIALOGS/shortcutDialog.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/shortcutDialog.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:49,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/shortcutDialog.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/common.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/shortcutTableView.h:5,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include/BALL/VIEW/UIC/ui_shortcutDialog.h:24,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DIALOGS/shortcutDialog.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/shortcutDialog.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 78%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/snapShotVisualisation.C.o
/usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/snapShotVisualisation.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/snapShotVisualisation.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/snapShotVisualisation.C:2:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/message.h: In member function 'void BALL::VIEW::SceneMessage::setStage(BALL::VIEW::Stage)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/message.h:409:15: warning: implicitly-declared 'BALL::VIEW::Stage& BALL::VIEW::Stage::operator=(const BALL::VIEW::Stage&)' is deprecated [-Wdeprecated-copy]
  409 |    { stage_ = stage;}
      |               ^~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/message.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/snapShotVisualisation.C:2:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/stage.h:301:4: note: because 'BALL::VIEW::Stage' has user-provided 'BALL::VIEW::Stage::Stage(const BALL::VIEW::Stage&)'
  301 |    Stage(const Stage& stage);
      |    ^~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:49,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/snapShotVisualisation.C:3:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/stage.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/message.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/snapShotVisualisation.C:2:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:49,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/snapShotVisualisation.C:3:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/stage.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/message.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/snapShotVisualisation.C:2:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:49,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/snapShotVisualisation.C:3:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/stage.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/message.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/snapShotVisualisation.C:2:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 78%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/stageSettings.C.o
/usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/stageSettings.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/stageSettings.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderSetup.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DIALOGS/stageSettings.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/stageSettings.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor 'BALL::VIEW::FrameBufferFormat::FrameBufferFormat()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:53:38: warning: implicitly-declared 'constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)' is deprecated [-Wdeprecated-copy]
   53 |       pixelFormat(PixelFormat::RGB_32)
      |                                      ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderSetup.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DIALOGS/stageSettings.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/stageSettings.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because 'BALL::VIEW::PixelFormat' has user-provided 'BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)'
  162 |    PixelFormat &operator=(const PixelFormat &f)
      |                 ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderSetup.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DIALOGS/stageSettings.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/stageSettings.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor 'BALL::VIEW::FrameBufferFormat::FrameBufferFormat(BALL::Size, BALL::Size, const BALL::VIEW::PixelFormat&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:60:30: warning: implicitly-declared 'constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)' is deprecated [-Wdeprecated-copy]
   60 |       pixelFormat(pixelFormat)
      |                              ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderSetup.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DIALOGS/stageSettings.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/stageSettings.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because 'BALL::VIEW::PixelFormat' has user-provided 'BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)'
  162 |    PixelFormat &operator=(const PixelFormat &f)
      |                 ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderSetup.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DIALOGS/stageSettings.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/stageSettings.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor 'BALL::VIEW::FrameBufferFormat::FrameBufferFormat(BALL::Size, BALL::Size, BALL::Size, const BALL::VIEW::PixelFormat&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:69:30: warning: implicitly-declared 'constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)' is deprecated [-Wdeprecated-copy]
   69 |       pixelFormat(pixelFormat)
      |                              ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderSetup.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DIALOGS/stageSettings.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/stageSettings.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because 'BALL::VIEW::PixelFormat' has user-provided 'BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)'
  162 |    PixelFormat &operator=(const PixelFormat &f)
      |                 ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:49,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/stageSettings.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DIALOGS/stageSettings.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/stageSettings.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:49,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/stageSettings.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DIALOGS/stageSettings.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/stageSettings.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:49,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/stageSettings.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DIALOGS/stageSettings.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/stageSettings.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/stageSettings.C: In member function 'void BALL::VIEW::StageSettings::stereoScreenChanged(int)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/stageSettings.C:378:47: warning: unused parameter 'new_screen' [-Wunused-parameter]
  378 |   void StageSettings::stereoScreenChanged(int new_screen)
      |                                           ~~~~^~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/stageSettings.C: In member function 'void BALL::VIEW::StageSettings::stereoModeChanged()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/stageSettings.C:433:20: warning: unused variable 'desktop' [-Wunused-variable]
  433 |    QDesktopWidget* desktop = QApplication::desktop();
      |                    ^~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/stageSettings.C: In member function 'void BALL::VIEW::StageSettings::screenCountChanged(int)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/stageSettings.C:600:8: warning: unused variable 'old_control' [-Wunused-variable]
  600 |    int old_control = controlScreen_comboBox->currentIndex();
      |        ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/stageSettings.C:601:8: warning: unused variable 'old_left' [-Wunused-variable]
  601 |    int old_left    = leftEyeScreen_comboBox->currentIndex();
      |        ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/stageSettings.C:602:8: warning: unused variable 'old_right' [-Wunused-variable]
  602 |    int old_right   = rightEyeScreen_comboBox->currentIndex();
      |        ^~~~~~~~~
[ 78%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/stereoSettingsDialog.C.o
/usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/stereoSettingsDialog.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/stereoSettingsDialog.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/stereoSettingsDialog.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor 'BALL::VIEW::FrameBufferFormat::FrameBufferFormat()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:53:38: warning: implicitly-declared 'constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)' is deprecated [-Wdeprecated-copy]
   53 |       pixelFormat(PixelFormat::RGB_32)
      |                                      ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/stereoSettingsDialog.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because 'BALL::VIEW::PixelFormat' has user-provided 'BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)'
  162 |    PixelFormat &operator=(const PixelFormat &f)
      |                 ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/stereoSettingsDialog.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor 'BALL::VIEW::FrameBufferFormat::FrameBufferFormat(BALL::Size, BALL::Size, const BALL::VIEW::PixelFormat&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:60:30: warning: implicitly-declared 'constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)' is deprecated [-Wdeprecated-copy]
   60 |       pixelFormat(pixelFormat)
      |                              ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/stereoSettingsDialog.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because 'BALL::VIEW::PixelFormat' has user-provided 'BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)'
  162 |    PixelFormat &operator=(const PixelFormat &f)
      |                 ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/stereoSettingsDialog.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor 'BALL::VIEW::FrameBufferFormat::FrameBufferFormat(BALL::Size, BALL::Size, BALL::Size, const BALL::VIEW::PixelFormat&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:69:30: warning: implicitly-declared 'constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)' is deprecated [-Wdeprecated-copy]
   69 |       pixelFormat(pixelFormat)
      |                              ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/stereoSettingsDialog.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because 'BALL::VIEW::PixelFormat' has user-provided 'BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)'
  162 |    PixelFormat &operator=(const PixelFormat &f)
      |                 ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:49,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/stereoSettingsDialog.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/representation.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/RENDERERS/renderer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/RENDERERS/glRenderer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/stereoSettingsDialog.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:49,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/stereoSettingsDialog.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/representation.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/RENDERERS/renderer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/RENDERERS/glRenderer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/stereoSettingsDialog.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:49,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/stereoSettingsDialog.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/representation.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/RENDERERS/renderer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/RENDERERS/glRenderer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/stereoSettingsDialog.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 78%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/undoManagerDialog.C.o
/usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/undoManagerDialog.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/undoManagerDialog.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:49,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/undoManagerDialog.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/snapShot.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/snapShotManager.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/snapshotManagerInterface.h:4,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DIALOGS/undoManagerDialog.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/undoManagerDialog.C:4:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:49,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/undoManagerDialog.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/snapShot.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/snapShotManager.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/snapshotManagerInterface.h:4,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DIALOGS/undoManagerDialog.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/undoManagerDialog.C:4:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:49,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/undoManagerDialog.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/snapShot.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/snapShotManager.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/snapshotManagerInterface.h:4,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DIALOGS/undoManagerDialog.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/undoManagerDialog.C:4:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/undoManagerDialog.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/message.h: In member function 'void BALL::VIEW::SceneMessage::setStage(BALL::VIEW::Stage)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/message.h:409:15: warning: implicitly-declared 'BALL::VIEW::Stage& BALL::VIEW::Stage::operator=(const BALL::VIEW::Stage&)' is deprecated [-Wdeprecated-copy]
  409 |    { stage_ = stage;}
      |               ^~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/message.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/undoManagerDialog.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/stage.h:301:4: note: because 'BALL::VIEW::Stage' has user-provided 'BALL::VIEW::Stage::Stage(const BALL::VIEW::Stage&)'
  301 |    Stage(const Stage& stage);
      |    ^~~~~
[ 78%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/DATATYPE/colorExtensions.C.o
/usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/DATATYPE/colorExtensions.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DATATYPE/colorExtensions.C
[ 78%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/DATATYPE/colorHSV.C.o
/usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/DATATYPE/colorHSV.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DATATYPE/colorHSV.C
[ 78%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/DATATYPE/colorRGBA.C.o
/usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/DATATYPE/colorRGBA.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DATATYPE/colorRGBA.C
[ 78%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/DATATYPE/colorMap.C.o
/usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/DATATYPE/colorMap.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DATATYPE/colorMap.C
[ 78%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/DATATYPE/colorUnit.C.o
/usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/DATATYPE/colorUnit.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DATATYPE/colorUnit.C
[ 78%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/DATATYPE/colorUnitHue.C.o
/usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/DATATYPE/colorUnitHue.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DATATYPE/colorUnitHue.C
[ 81%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/DATATYPE/vertex1.C.o
/usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/DATATYPE/vertex1.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DATATYPE/vertex1.C
[ 81%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/DATATYPE/vertex2.C.o
/usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/DATATYPE/vertex2.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DATATYPE/vertex2.C
[ 81%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/DATATYPE/dataset.C.o
/usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/DATATYPE/dataset.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DATATYPE/dataset.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/datasetControl.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DATATYPE/dataset.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/datasetControl.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DATATYPE/dataset.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/datasetControl.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DATATYPE/dataset.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/datasetControl.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DATATYPE/dataset.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/datasetControl.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DATATYPE/dataset.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/datasetControl.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DATATYPE/dataset.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DATATYPE/dataset.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/message.h: In member function 'void BALL::VIEW::SceneMessage::setStage(BALL::VIEW::Stage)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/message.h:409:15: warning: implicitly-declared 'BALL::VIEW::Stage& BALL::VIEW::Stage::operator=(const BALL::VIEW::Stage&)' is deprecated [-Wdeprecated-copy]
  409 |    { stage_ = stage;}
      |               ^~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/message.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DATATYPE/dataset.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/stage.h:301:4: note: because 'BALL::VIEW::Stage' has user-provided 'BALL::VIEW::Stage::Stage(const BALL::VIEW::Stage&)'
  301 |    Stage(const Stage& stage);
      |    ^~~~~
[ 81%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/DATATYPE/raytraceableGrid.C.o
/usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/DATATYPE/raytraceableGrid.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DATATYPE/raytraceableGrid.C
[ 81%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/DATATYPE/standardDatasets.C.o
/usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/DATATYPE/standardDatasets.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DATATYPE/standardDatasets.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/datasetControl.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DATATYPE/standardDatasets.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector2.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/regularData2D.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DATATYPE/standardDatasets.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DATATYPE/standardDatasets.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/datasetControl.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DATATYPE/standardDatasets.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector2.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/regularData2D.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DATATYPE/standardDatasets.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DATATYPE/standardDatasets.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/datasetControl.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DATATYPE/standardDatasets.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector2.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/regularData2D.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DATATYPE/standardDatasets.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DATATYPE/standardDatasets.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DATATYPE/standardDatasets.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor 'BALL::VIEW::FrameBufferFormat::FrameBufferFormat()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:53:38: warning: implicitly-declared 'constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)' is deprecated [-Wdeprecated-copy]
   53 |       pixelFormat(PixelFormat::RGB_32)
      |                                      ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DATATYPE/standardDatasets.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because 'BALL::VIEW::PixelFormat' has user-provided 'BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)'
  162 |    PixelFormat &operator=(const PixelFormat &f)
      |                 ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DATATYPE/standardDatasets.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor 'BALL::VIEW::FrameBufferFormat::FrameBufferFormat(BALL::Size, BALL::Size, const BALL::VIEW::PixelFormat&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:60:30: warning: implicitly-declared 'constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)' is deprecated [-Wdeprecated-copy]
   60 |       pixelFormat(pixelFormat)
      |                              ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DATATYPE/standardDatasets.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because 'BALL::VIEW::PixelFormat' has user-provided 'BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)'
  162 |    PixelFormat &operator=(const PixelFormat &f)
      |                 ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DATATYPE/standardDatasets.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor 'BALL::VIEW::FrameBufferFormat::FrameBufferFormat(BALL::Size, BALL::Size, BALL::Size, const BALL::VIEW::PixelFormat&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:69:30: warning: implicitly-declared 'constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)' is deprecated [-Wdeprecated-copy]
   69 |       pixelFormat(pixelFormat)
      |                              ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DATATYPE/standardDatasets.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because 'BALL::VIEW::PixelFormat' has user-provided 'BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)'
  162 |    PixelFormat &operator=(const PixelFormat &f)
      |                 ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DATATYPE/standardDatasets.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/message.h: In member function 'void BALL::VIEW::SceneMessage::setStage(BALL::VIEW::Stage)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/message.h:409:15: warning: implicitly-declared 'BALL::VIEW::Stage& BALL::VIEW::Stage::operator=(const BALL::VIEW::Stage&)' is deprecated [-Wdeprecated-copy]
  409 |    { stage_ = stage;}
      |               ^~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/RENDERERS/renderer.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/RENDERERS/glRenderer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DATATYPE/standardDatasets.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/stage.h:301:4: note: because 'BALL::VIEW::Stage' has user-provided 'BALL::VIEW::Stage::Stage(const BALL::VIEW::Stage&)'
  301 |    Stage(const Stage& stage);
      |    ^~~~~
[ 81%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/KERNEL/MODES/editMode.C.o
/usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/KERNEL/MODES/editMode.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/MODES/editMode.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/moleculeIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/MODES/editMode.C:18:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/PDBAtom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/MODES/editMode.C:17:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/moleculeIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/MODES/editMode.C:18:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/PDBAtom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/MODES/editMode.C:17:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/moleculeIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/MODES/editMode.C:18:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/PDBAtom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/MODES/editMode.C:17:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/MODES/editMode.C:22:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor 'BALL::VIEW::FrameBufferFormat::FrameBufferFormat()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:53:38: warning: implicitly-declared 'constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)' is deprecated [-Wdeprecated-copy]
   53 |       pixelFormat(PixelFormat::RGB_32)
      |                                      ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/MODES/editMode.C:22:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because 'BALL::VIEW::PixelFormat' has user-provided 'BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)'
  162 |    PixelFormat &operator=(const PixelFormat &f)
      |                 ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/MODES/editMode.C:22:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor 'BALL::VIEW::FrameBufferFormat::FrameBufferFormat(BALL::Size, BALL::Size, const BALL::VIEW::PixelFormat&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:60:30: warning: implicitly-declared 'constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)' is deprecated [-Wdeprecated-copy]
   60 |       pixelFormat(pixelFormat)
      |                              ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/MODES/editMode.C:22:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because 'BALL::VIEW::PixelFormat' has user-provided 'BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)'
  162 |    PixelFormat &operator=(const PixelFormat &f)
      |                 ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/MODES/editMode.C:22:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor 'BALL::VIEW::FrameBufferFormat::FrameBufferFormat(BALL::Size, BALL::Size, BALL::Size, const BALL::VIEW::PixelFormat&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:69:30: warning: implicitly-declared 'constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)' is deprecated [-Wdeprecated-copy]
   69 |       pixelFormat(pixelFormat)
      |                              ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/MODES/editMode.C:22:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because 'BALL::VIEW::PixelFormat' has user-provided 'BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)'
  162 |    PixelFormat &operator=(const PixelFormat &f)
      |                 ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/MODES/editMode.C:24:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/message.h: In member function 'void BALL::VIEW::SceneMessage::setStage(BALL::VIEW::Stage)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/message.h:409:15: warning: implicitly-declared 'BALL::VIEW::Stage& BALL::VIEW::Stage::operator=(const BALL::VIEW::Stage&)' is deprecated [-Wdeprecated-copy]
  409 |    { stage_ = stage;}
      |               ^~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/RENDERERS/renderer.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/RENDERERS/glRenderer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/MODES/editMode.C:22:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/stage.h:301:4: note: because 'BALL::VIEW::Stage' has user-provided 'BALL::VIEW::Stage::Stage(const BALL::VIEW::Stage&)'
  301 |    Stage(const Stage& stage);
      |    ^~~~~
[ 81%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/KERNEL/MODES/interactionMode.C.o
/usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/KERNEL/MODES/interactionMode.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/MODES/interactionMode.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/MODES/interactionMode.C:3:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor 'BALL::VIEW::FrameBufferFormat::FrameBufferFormat()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:53:38: warning: implicitly-declared 'constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)' is deprecated [-Wdeprecated-copy]
   53 |       pixelFormat(PixelFormat::RGB_32)
      |                                      ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/MODES/interactionMode.C:3:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because 'BALL::VIEW::PixelFormat' has user-provided 'BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)'
  162 |    PixelFormat &operator=(const PixelFormat &f)
      |                 ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/MODES/interactionMode.C:3:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor 'BALL::VIEW::FrameBufferFormat::FrameBufferFormat(BALL::Size, BALL::Size, const BALL::VIEW::PixelFormat&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:60:30: warning: implicitly-declared 'constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)' is deprecated [-Wdeprecated-copy]
   60 |       pixelFormat(pixelFormat)
      |                              ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/MODES/interactionMode.C:3:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because 'BALL::VIEW::PixelFormat' has user-provided 'BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)'
  162 |    PixelFormat &operator=(const PixelFormat &f)
      |                 ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/MODES/interactionMode.C:3:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor 'BALL::VIEW::FrameBufferFormat::FrameBufferFormat(BALL::Size, BALL::Size, BALL::Size, const BALL::VIEW::PixelFormat&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:69:30: warning: implicitly-declared 'constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)' is deprecated [-Wdeprecated-copy]
   69 |       pixelFormat(pixelFormat)
      |                              ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/MODES/interactionMode.C:3:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because 'BALL::VIEW::PixelFormat' has user-provided 'BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)'
  162 |    PixelFormat &operator=(const PixelFormat &f)
      |                 ^~~~~~~~
[ 81%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/KERNEL/MODES/interactionModeManager.C.o
/usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/KERNEL/MODES/interactionModeManager.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/MODES/interactionModeManager.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/MODES/interactionModeManager.C:3:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor 'BALL::VIEW::FrameBufferFormat::FrameBufferFormat()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:53:38: warning: implicitly-declared 'constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)' is deprecated [-Wdeprecated-copy]
   53 |       pixelFormat(PixelFormat::RGB_32)
      |                                      ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/MODES/interactionModeManager.C:3:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because 'BALL::VIEW::PixelFormat' has user-provided 'BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)'
  162 |    PixelFormat &operator=(const PixelFormat &f)
      |                 ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/MODES/interactionModeManager.C:3:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor 'BALL::VIEW::FrameBufferFormat::FrameBufferFormat(BALL::Size, BALL::Size, const BALL::VIEW::PixelFormat&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:60:30: warning: implicitly-declared 'constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)' is deprecated [-Wdeprecated-copy]
   60 |       pixelFormat(pixelFormat)
      |                              ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/MODES/interactionModeManager.C:3:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because 'BALL::VIEW::PixelFormat' has user-provided 'BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)'
  162 |    PixelFormat &operator=(const PixelFormat &f)
      |                 ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/MODES/interactionModeManager.C:3:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor 'BALL::VIEW::FrameBufferFormat::FrameBufferFormat(BALL::Size, BALL::Size, BALL::Size, const BALL::VIEW::PixelFormat&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:69:30: warning: implicitly-declared 'constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)' is deprecated [-Wdeprecated-copy]
   69 |       pixelFormat(pixelFormat)
      |                              ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/MODES/interactionModeManager.C:3:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because 'BALL::VIEW::PixelFormat' has user-provided 'BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)'
  162 |    PixelFormat &operator=(const PixelFormat &f)
      |                 ^~~~~~~~
[ 81%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/KERNEL/MODES/moveMode.C.o
/usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/KERNEL/MODES/moveMode.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/MODES/moveMode.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/geometricProperties.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/MODES/moveMode.C:3:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/geometricProperties.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/MODES/moveMode.C:3:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/geometricProperties.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/MODES/moveMode.C:3:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/geometricProperties.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/MODES/moveMode.C:3:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/geometricProperties.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/MODES/moveMode.C:3:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/geometricProperties.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/MODES/moveMode.C:3:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/MODES/moveMode.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor 'BALL::VIEW::FrameBufferFormat::FrameBufferFormat()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:53:38: warning: implicitly-declared 'constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)' is deprecated [-Wdeprecated-copy]
   53 |       pixelFormat(PixelFormat::RGB_32)
      |                                      ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/MODES/moveMode.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because 'BALL::VIEW::PixelFormat' has user-provided 'BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)'
  162 |    PixelFormat &operator=(const PixelFormat &f)
      |                 ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/MODES/moveMode.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor 'BALL::VIEW::FrameBufferFormat::FrameBufferFormat(BALL::Size, BALL::Size, const BALL::VIEW::PixelFormat&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:60:30: warning: implicitly-declared 'constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)' is deprecated [-Wdeprecated-copy]
   60 |       pixelFormat(pixelFormat)
      |                              ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/MODES/moveMode.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because 'BALL::VIEW::PixelFormat' has user-provided 'BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)'
  162 |    PixelFormat &operator=(const PixelFormat &f)
      |                 ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/MODES/moveMode.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor 'BALL::VIEW::FrameBufferFormat::FrameBufferFormat(BALL::Size, BALL::Size, BALL::Size, const BALL::VIEW::PixelFormat&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:69:30: warning: implicitly-declared 'constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)' is deprecated [-Wdeprecated-copy]
   69 |       pixelFormat(pixelFormat)
      |                              ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/MODES/moveMode.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because 'BALL::VIEW::PixelFormat' has user-provided 'BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)'
  162 |    PixelFormat &operator=(const PixelFormat &f)
      |                 ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/MODES/moveMode.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/message.h: In member function 'void BALL::VIEW::SceneMessage::setStage(BALL::VIEW::Stage)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/message.h:409:15: warning: implicitly-declared 'BALL::VIEW::Stage& BALL::VIEW::Stage::operator=(const BALL::VIEW::Stage&)' is deprecated [-Wdeprecated-copy]
  409 |    { stage_ = stage;}
      |               ^~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/RENDERERS/renderer.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/RENDERERS/glRenderer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/MODES/moveMode.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/stage.h:301:4: note: because 'BALL::VIEW::Stage' has user-provided 'BALL::VIEW::Stage::Stage(const BALL::VIEW::Stage&)'
  301 |    Stage(const Stage& stage);
      |    ^~~~~
[ 81%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/KERNEL/MODES/pickingMode.C.o
/usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/KERNEL/MODES/pickingMode.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/MODES/pickingMode.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/MODES/pickingMode.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor 'BALL::VIEW::FrameBufferFormat::FrameBufferFormat()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:53:38: warning: implicitly-declared 'constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)' is deprecated [-Wdeprecated-copy]
   53 |       pixelFormat(PixelFormat::RGB_32)
      |                                      ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/MODES/pickingMode.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because 'BALL::VIEW::PixelFormat' has user-provided 'BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)'
  162 |    PixelFormat &operator=(const PixelFormat &f)
      |                 ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/MODES/pickingMode.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor 'BALL::VIEW::FrameBufferFormat::FrameBufferFormat(BALL::Size, BALL::Size, const BALL::VIEW::PixelFormat&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:60:30: warning: implicitly-declared 'constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)' is deprecated [-Wdeprecated-copy]
   60 |       pixelFormat(pixelFormat)
      |                              ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/MODES/pickingMode.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because 'BALL::VIEW::PixelFormat' has user-provided 'BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)'
  162 |    PixelFormat &operator=(const PixelFormat &f)
      |                 ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/MODES/pickingMode.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor 'BALL::VIEW::FrameBufferFormat::FrameBufferFormat(BALL::Size, BALL::Size, BALL::Size, const BALL::VIEW::PixelFormat&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:69:30: warning: implicitly-declared 'constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)' is deprecated [-Wdeprecated-copy]
   69 |       pixelFormat(pixelFormat)
      |                              ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/MODES/pickingMode.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because 'BALL::VIEW::PixelFormat' has user-provided 'BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)'
  162 |    PixelFormat &operator=(const PixelFormat &f)
      |                 ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:49,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/MODES/pickingMode.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/representation.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/RENDERERS/renderer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/RENDERERS/glRenderer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/MODES/pickingMode.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:49,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/MODES/pickingMode.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/representation.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/RENDERERS/renderer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/RENDERERS/glRenderer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/MODES/pickingMode.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:49,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/MODES/pickingMode.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/representation.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/RENDERERS/renderer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/RENDERERS/glRenderer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/MODES/pickingMode.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/MODES/pickingMode.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/message.h: In member function 'void BALL::VIEW::SceneMessage::setStage(BALL::VIEW::Stage)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/message.h:409:15: warning: implicitly-declared 'BALL::VIEW::Stage& BALL::VIEW::Stage::operator=(const BALL::VIEW::Stage&)' is deprecated [-Wdeprecated-copy]
  409 |    { stage_ = stage;}
      |               ^~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/RENDERERS/renderer.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/RENDERERS/glRenderer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/MODES/pickingMode.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/stage.h:301:4: note: because 'BALL::VIEW::Stage' has user-provided 'BALL::VIEW::Stage::Stage(const BALL::VIEW::Stage&)'
  301 |    Stage(const Stage& stage);
      |    ^~~~~
[ 81%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/KERNEL/MODES/rotateMode.C.o
/usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/KERNEL/MODES/rotateMode.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/MODES/rotateMode.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/MODES/rotateMode.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor 'BALL::VIEW::FrameBufferFormat::FrameBufferFormat()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:53:38: warning: implicitly-declared 'constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)' is deprecated [-Wdeprecated-copy]
   53 |       pixelFormat(PixelFormat::RGB_32)
      |                                      ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/MODES/rotateMode.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because 'BALL::VIEW::PixelFormat' has user-provided 'BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)'
  162 |    PixelFormat &operator=(const PixelFormat &f)
      |                 ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/MODES/rotateMode.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor 'BALL::VIEW::FrameBufferFormat::FrameBufferFormat(BALL::Size, BALL::Size, const BALL::VIEW::PixelFormat&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:60:30: warning: implicitly-declared 'constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)' is deprecated [-Wdeprecated-copy]
   60 |       pixelFormat(pixelFormat)
      |                              ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/MODES/rotateMode.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because 'BALL::VIEW::PixelFormat' has user-provided 'BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)'
  162 |    PixelFormat &operator=(const PixelFormat &f)
      |                 ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/MODES/rotateMode.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor 'BALL::VIEW::FrameBufferFormat::FrameBufferFormat(BALL::Size, BALL::Size, BALL::Size, const BALL::VIEW::PixelFormat&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:69:30: warning: implicitly-declared 'constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)' is deprecated [-Wdeprecated-copy]
   69 |       pixelFormat(pixelFormat)
      |                              ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/MODES/rotateMode.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because 'BALL::VIEW::PixelFormat' has user-provided 'BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)'
  162 |    PixelFormat &operator=(const PixelFormat &f)
      |                 ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:49,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/MODES/rotateMode.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/representation.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/RENDERERS/renderer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/RENDERERS/glRenderer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/MODES/rotateMode.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:49,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/MODES/rotateMode.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/representation.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/RENDERERS/renderer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/RENDERERS/glRenderer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/MODES/rotateMode.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:49,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/MODES/rotateMode.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/representation.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/RENDERERS/renderer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/RENDERERS/glRenderer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/MODES/rotateMode.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 81%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/KERNEL/clippingPlane.C.o
/usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/KERNEL/clippingPlane.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/clippingPlane.C
[ 81%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/KERNEL/common.C.o
/usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/KERNEL/common.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/common.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:49,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/common.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/common.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/common.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:49,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/common.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/common.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/common.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:49,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/common.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/common.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/common.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/common.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/message.h: In member function 'void BALL::VIEW::SceneMessage::setStage(BALL::VIEW::Stage)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/message.h:409:15: warning: implicitly-declared 'BALL::VIEW::Stage& BALL::VIEW::Stage::operator=(const BALL::VIEW::Stage&)' is deprecated [-Wdeprecated-copy]
  409 |    { stage_ = stage;}
      |               ^~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/message.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/common.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/stage.h:301:4: note: because 'BALL::VIEW::Stage' has user-provided 'BALL::VIEW::Stage::Stage(const BALL::VIEW::Stage&)'
  301 |    Stage(const Stage& stage);
      |    ^~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/common.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor 'BALL::VIEW::FrameBufferFormat::FrameBufferFormat()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:53:38: warning: implicitly-declared 'constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)' is deprecated [-Wdeprecated-copy]
   53 |       pixelFormat(PixelFormat::RGB_32)
      |                                      ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/common.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because 'BALL::VIEW::PixelFormat' has user-provided 'BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)'
  162 |    PixelFormat &operator=(const PixelFormat &f)
      |                 ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/common.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor 'BALL::VIEW::FrameBufferFormat::FrameBufferFormat(BALL::Size, BALL::Size, const BALL::VIEW::PixelFormat&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:60:30: warning: implicitly-declared 'constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)' is deprecated [-Wdeprecated-copy]
   60 |       pixelFormat(pixelFormat)
      |                              ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/common.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because 'BALL::VIEW::PixelFormat' has user-provided 'BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)'
  162 |    PixelFormat &operator=(const PixelFormat &f)
      |                 ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/common.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor 'BALL::VIEW::FrameBufferFormat::FrameBufferFormat(BALL::Size, BALL::Size, BALL::Size, const BALL::VIEW::PixelFormat&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:69:30: warning: implicitly-declared 'constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)' is deprecated [-Wdeprecated-copy]
   69 |       pixelFormat(pixelFormat)
      |                              ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/common.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because 'BALL::VIEW::PixelFormat' has user-provided 'BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)'
  162 |    PixelFormat &operator=(const PixelFormat &f)
      |                 ^~~~~~~~
[ 81%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/KERNEL/compositeManager.C.o
/usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/KERNEL/compositeManager.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/compositeManager.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/compositeManager.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/compositeManager.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/compositeManager.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/compositeManager.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/compositeManager.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/compositeManager.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 81%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/KERNEL/connectionObject.C.o
/usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/KERNEL/connectionObject.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/connectionObject.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/connectionObject.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/message.h: In member function 'void BALL::VIEW::SceneMessage::setStage(BALL::VIEW::Stage)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/message.h:409:15: warning: implicitly-declared 'BALL::VIEW::Stage& BALL::VIEW::Stage::operator=(const BALL::VIEW::Stage&)' is deprecated [-Wdeprecated-copy]
  409 |    { stage_ = stage;}
      |               ^~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/message.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/connectionObject.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/stage.h:301:4: note: because 'BALL::VIEW::Stage' has user-provided 'BALL::VIEW::Stage::Stage(const BALL::VIEW::Stage&)'
  301 |    Stage(const Stage& stage);
      |    ^~~~~
[ 81%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/KERNEL/editOperation.C.o
/usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/KERNEL/editOperation.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/editOperation.C
[ 81%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/KERNEL/geometricObject.C.o
/usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/KERNEL/geometricObject.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/geometricObject.C
[ 81%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/KERNEL/iconLoader.C.o
/usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/KERNEL/iconLoader.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/iconLoader.C
[ 81%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/KERNEL/mainControl.C.o
/usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/KERNEL/mainControl.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/mainControl.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:49,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/mainControl.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/representation.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/representationManager.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/mainControl.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:49,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/mainControl.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/representation.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/representationManager.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/mainControl.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:49,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/mainControl.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/representation.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/representationManager.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/mainControl.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/mainControl.C:15:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/message.h: In member function 'void BALL::VIEW::SceneMessage::setStage(BALL::VIEW::Stage)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/message.h:409:15: warning: implicitly-declared 'BALL::VIEW::Stage& BALL::VIEW::Stage::operator=(const BALL::VIEW::Stage&)' is deprecated [-Wdeprecated-copy]
  409 |    { stage_ = stage;}
      |               ^~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/message.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/mainControl.C:15:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/stage.h:301:4: note: because 'BALL::VIEW::Stage' has user-provided 'BALL::VIEW::Stage::Stage(const BALL::VIEW::Stage&)'
  301 |    Stage(const Stage& stage);
      |    ^~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/embeddable.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/mainControl.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94ParametersBase::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:43:3: note: in expansion of macro 'BALL_CREATE'
   43 |   BALL_CREATE(MMFF94ParametersBase)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/molecularStructure.h:57,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/mainControl.C:33:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/embeddable.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/mainControl.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:3: note: in expansion of macro 'BALL_CREATE'
  217 |   BALL_CREATE(MMFF94StretchParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/molecularStructure.h:57,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/mainControl.C:33:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:226:34: note: because 'BALL::MMFF94StretchParameters' has user-provided 'const BALL::MMFF94StretchParameters& BALL::MMFF94StretchParameters::operator=(const BALL::MMFF94StretchParameters&)'
  226 |   const MMFF94StretchParameters& operator = (const MMFF94StretchParameters& param)
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:185:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  185 |  class BALL_EXPORT MMFF94StretchParameters:
      |                    ^~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/embeddable.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/mainControl.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:3: note: in expansion of macro 'BALL_CREATE'
  217 |   BALL_CREATE(MMFF94StretchParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94BendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:3: note: in expansion of macro 'BALL_CREATE'
  271 |   BALL_CREATE(MMFF94BendParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/molecularStructure.h:57,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/mainControl.C:33:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:280:31: note: because 'BALL::MMFF94BendParameters' has user-provided 'const BALL::MMFF94BendParameters& BALL::MMFF94BendParameters::operator=(const BALL::MMFF94BendParameters&)'
  280 |   const MMFF94BendParameters& operator = (const MMFF94BendParameters& param)
      |                               ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:263:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  263 |  class BALL_EXPORT MMFF94BendParameters
      |                    ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/embeddable.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/mainControl.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94BendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:3: note: in expansion of macro 'BALL_CREATE'
  271 |   BALL_CREATE(MMFF94BendParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:3: note: in expansion of macro 'BALL_CREATE'
  318 |   BALL_CREATE(MMFF94StretchBendParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/molecularStructure.h:57,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/mainControl.C:33:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:327:38: note: because 'BALL::MMFF94StretchBendParameters' has user-provided 'const BALL::MMFF94StretchBendParameters& BALL::MMFF94StretchBendParameters::operator=(const BALL::MMFF94StretchBendParameters&)'
  327 |   const MMFF94StretchBendParameters& operator = (const MMFF94StretchBendParameters& param)
      |                                      ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:310:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  310 |  class BALL_EXPORT MMFF94StretchBendParameters
      |                    ^~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/embeddable.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/mainControl.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:3: note: in expansion of macro 'BALL_CREATE'
  318 |   BALL_CREATE(MMFF94StretchBendParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:3: note: in expansion of macro 'BALL_CREATE'
  374 |   BALL_CREATE(MMFF94TorsionParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/molecularStructure.h:57,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/mainControl.C:33:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:383:34: note: because 'BALL::MMFF94TorsionParameters' has user-provided 'const BALL::MMFF94TorsionParameters& BALL::MMFF94TorsionParameters::operator=(const BALL::MMFF94TorsionParameters&)'
  383 |   const MMFF94TorsionParameters& operator = (const MMFF94TorsionParameters& param)
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:366:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  366 |  class BALL_EXPORT MMFF94TorsionParameters
      |                    ^~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/embeddable.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/mainControl.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:3: note: in expansion of macro 'BALL_CREATE'
  374 |   BALL_CREATE(MMFF94TorsionParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:3: note: in expansion of macro 'BALL_CREATE'
  422 |   BALL_CREATE(MMFF94PlaneParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/molecularStructure.h:57,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/mainControl.C:33:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:431:32: note: because 'BALL::MMFF94PlaneParameters' has user-provided 'const BALL::MMFF94PlaneParameters& BALL::MMFF94PlaneParameters::operator=(const BALL::MMFF94PlaneParameters&)'
  431 |   const MMFF94PlaneParameters& operator = (const MMFF94PlaneParameters& param)
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:414:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  414 |  class BALL_EXPORT MMFF94PlaneParameters
      |                    ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/embeddable.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/mainControl.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:3: note: in expansion of macro 'BALL_CREATE'
  422 |   BALL_CREATE(MMFF94PlaneParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:3: note: in expansion of macro 'BALL_CREATE'
  473 |   BALL_CREATE(MMFF94VDWParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/molecularStructure.h:57,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/mainControl.C:33:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:482:30: note: because 'BALL::MMFF94VDWParameters' has user-provided 'const BALL::MMFF94VDWParameters& BALL::MMFF94VDWParameters::operator=(const BALL::MMFF94VDWParameters&)'
  482 |   const MMFF94VDWParameters& operator = (const MMFF94VDWParameters& param)
      |                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:458:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  458 |  class BALL_EXPORT MMFF94VDWParameters
      |                    ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/embeddable.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/mainControl.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:3: note: in expansion of macro 'BALL_CREATE'
  473 |   BALL_CREATE(MMFF94VDWParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94ESParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:3: note: in expansion of macro 'BALL_CREATE'
  530 |   BALL_CREATE(MMFF94ESParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/molecularStructure.h:57,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/mainControl.C:33:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:539:29: note: because 'BALL::MMFF94ESParameters' has user-provided 'const BALL::MMFF94ESParameters& BALL::MMFF94ESParameters::operator=(const BALL::MMFF94ESParameters&)'
  539 |   const MMFF94ESParameters& operator = (const MMFF94ESParameters& param)
      |                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:525:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  525 |  class BALL_EXPORT MMFF94ESParameters
      |                    ^~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/embeddable.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/mainControl.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94ESParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:3: note: in expansion of macro 'BALL_CREATE'
  530 |   BALL_CREATE(MMFF94ESParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/mainControl.C:34:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor 'BALL::VIEW::FrameBufferFormat::FrameBufferFormat()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:53:38: warning: implicitly-declared 'constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)' is deprecated [-Wdeprecated-copy]
   53 |       pixelFormat(PixelFormat::RGB_32)
      |                                      ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/mainControl.C:34:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because 'BALL::VIEW::PixelFormat' has user-provided 'BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)'
  162 |    PixelFormat &operator=(const PixelFormat &f)
      |                 ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/mainControl.C:34:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor 'BALL::VIEW::FrameBufferFormat::FrameBufferFormat(BALL::Size, BALL::Size, const BALL::VIEW::PixelFormat&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:60:30: warning: implicitly-declared 'constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)' is deprecated [-Wdeprecated-copy]
   60 |       pixelFormat(pixelFormat)
      |                              ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/mainControl.C:34:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because 'BALL::VIEW::PixelFormat' has user-provided 'BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)'
  162 |    PixelFormat &operator=(const PixelFormat &f)
      |                 ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/mainControl.C:34:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor 'BALL::VIEW::FrameBufferFormat::FrameBufferFormat(BALL::Size, BALL::Size, BALL::Size, const BALL::VIEW::PixelFormat&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:69:30: warning: implicitly-declared 'constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)' is deprecated [-Wdeprecated-copy]
   69 |       pixelFormat(pixelFormat)
      |                              ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/mainControl.C:34:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because 'BALL::VIEW::PixelFormat' has user-provided 'BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)'
  162 |    PixelFormat &operator=(const PixelFormat &f)
      |                 ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/mainControl.C:42:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/mainControl.C: In member function 'void BALL::VIEW::MainControl::selectCompositeRecursive(BALL::Composite*, bool)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:77:49: warning: implicitly-declared 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   77 | for (bond_iterator = (bond_container).beginBond(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/mainControl.C:1334:5: note: in expansion of macro 'BALL_FOREACH_ATOM_BOND'
 1334 |     BALL_FOREACH_ATOM_BOND(*atom, bi)
      |     ^~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:49,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/mainControl.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:437:15: note: because 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::RandomAccessIterator<Container, DataType, Position, Traits>::RandomAccessIterator(const BALL::RandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
  437 |   BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:413:8: warning: implicitly-declared 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  413 |  class RandomAccessIterator
      |        ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:47:15: note: because 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   47 |   BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:24:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   24 |  class ConstRandomAccessIterator
      |        ^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/representation.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/representationManager.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/mainControl.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:49,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/mainControl.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:413:8: note: synthesized method 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' first required here
  413 |  class RandomAccessIterator
      |        ^~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/mainControl.C:42:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/mainControl.C: In member function 'void BALL::VIEW::MainControl::selectCompositeRecursive(BALL::Composite*, bool)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:77:49: note: synthesized method 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' first required here
   77 | for (bond_iterator = (bond_container).beginBond(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/mainControl.C:1334:5: note: in expansion of macro 'BALL_FOREACH_ATOM_BOND'
 1334 |     BALL_FOREACH_ATOM_BOND(*atom, bi)
      |     ^~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/mainControl.C: In member function 'void BALL::VIEW::MainControl::deselectCompositeRecursive(BALL::Composite*, bool)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:77:49: warning: implicitly-declared 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   77 | for (bond_iterator = (bond_container).beginBond(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/mainControl.C:1405:5: note: in expansion of macro 'BALL_FOREACH_ATOM_BOND'
 1405 |     BALL_FOREACH_ATOM_BOND(*atom, bi)
      |     ^~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:49,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/mainControl.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:437:15: note: because 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::RandomAccessIterator<Container, DataType, Position, Traits>::RandomAccessIterator(const BALL::RandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
  437 |   BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/mainControl.C: In member function 'void BALL::VIEW::MainControl::loadBALLViewProjectFile(const BALL::String&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/mainControl.C:2066:46: warning: implicitly-declared 'BALL::VIEW::Stage& BALL::VIEW::Stage::operator=(const BALL::VIEW::Stage&)' is deprecated [-Wdeprecated-copy]
 2066 |     stage = *Scene::getInstance(0)->getStage();
      |                                              ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/message.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/mainControl.C:15:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/stage.h:301:4: note: because 'BALL::VIEW::Stage' has user-provided 'BALL::VIEW::Stage::Stage(const BALL::VIEW::Stage&)'
  301 |    Stage(const Stage& stage);
      |    ^~~~~
[ 81%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/KERNEL/message.C.o
/usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/KERNEL/message.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/message.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/message.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/message.h: In member function 'void BALL::VIEW::SceneMessage::setStage(BALL::VIEW::Stage)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/message.h:409:15: warning: implicitly-declared 'BALL::VIEW::Stage& BALL::VIEW::Stage::operator=(const BALL::VIEW::Stage&)' is deprecated [-Wdeprecated-copy]
  409 |    { stage_ = stage;}
      |               ^~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/message.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/message.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/stage.h:301:4: note: because 'BALL::VIEW::Stage' has user-provided 'BALL::VIEW::Stage::Stage(const BALL::VIEW::Stage&)'
  301 |    Stage(const Stage& stage);
      |    ^~~~~
[ 81%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/KERNEL/modelInformation.C.o
/usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/KERNEL/modelInformation.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/modelInformation.C
[ 81%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/KERNEL/modularWidget.C.o
/usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/KERNEL/modularWidget.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/modularWidget.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/modularWidget.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/message.h: In member function 'void BALL::VIEW::SceneMessage::setStage(BALL::VIEW::Stage)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/message.h:409:15: warning: implicitly-declared 'BALL::VIEW::Stage& BALL::VIEW::Stage::operator=(const BALL::VIEW::Stage&)' is deprecated [-Wdeprecated-copy]
  409 |    { stage_ = stage;}
      |               ^~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/message.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/modularWidget.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/stage.h:301:4: note: because 'BALL::VIEW::Stage' has user-provided 'BALL::VIEW::Stage::Stage(const BALL::VIEW::Stage&)'
  301 |    Stage(const Stage& stage);
      |    ^~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:49,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/modularWidget.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/stage.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/message.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/modularWidget.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:49,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/modularWidget.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/stage.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/message.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/modularWidget.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:49,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/modularWidget.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/stage.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/message.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/modularWidget.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 81%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/KERNEL/preferencesEntry.C.o
/usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/KERNEL/preferencesEntry.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/preferencesEntry.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/preferencesEntry.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/message.h: In member function 'void BALL::VIEW::SceneMessage::setStage(BALL::VIEW::Stage)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/message.h:409:15: warning: implicitly-declared 'BALL::VIEW::Stage& BALL::VIEW::Stage::operator=(const BALL::VIEW::Stage&)' is deprecated [-Wdeprecated-copy]
  409 |    { stage_ = stage;}
      |               ^~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/message.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/preferencesEntry.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/stage.h:301:4: note: because 'BALL::VIEW::Stage' has user-provided 'BALL::VIEW::Stage::Stage(const BALL::VIEW::Stage&)'
  301 |    Stage(const Stage& stage);
      |    ^~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:49,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/preferencesEntry.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/stage.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/message.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/preferencesEntry.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:49,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/preferencesEntry.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/stage.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/message.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/preferencesEntry.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:49,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/preferencesEntry.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/stage.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/message.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/preferencesEntry.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 81%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/KERNEL/representationManager.C.o
/usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/KERNEL/representationManager.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/representationManager.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:49,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/representationManager.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/representation.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/representationManager.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/representationManager.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:49,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/representationManager.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/representation.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/representationManager.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/representationManager.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:49,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/representationManager.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/representation.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/representationManager.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/representationManager.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/representationManager.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/message.h: In member function 'void BALL::VIEW::SceneMessage::setStage(BALL::VIEW::Stage)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/message.h:409:15: warning: implicitly-declared 'BALL::VIEW::Stage& BALL::VIEW::Stage::operator=(const BALL::VIEW::Stage&)' is deprecated [-Wdeprecated-copy]
  409 |    { stage_ = stage;}
      |               ^~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/message.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/representationManager.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/stage.h:301:4: note: because 'BALL::VIEW::Stage' has user-provided 'BALL::VIEW::Stage::Stage(const BALL::VIEW::Stage&)'
  301 |    Stage(const Stage& stage);
      |    ^~~~~
[ 84%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/KERNEL/representation.C.o
/usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/KERNEL/representation.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/representation.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/representation.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/message.h: In member function 'void BALL::VIEW::SceneMessage::setStage(BALL::VIEW::Stage)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/message.h:409:15: warning: implicitly-declared 'BALL::VIEW::Stage& BALL::VIEW::Stage::operator=(const BALL::VIEW::Stage&)' is deprecated [-Wdeprecated-copy]
  409 |    { stage_ = stage;}
      |               ^~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/message.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/representation.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/stage.h:301:4: note: because 'BALL::VIEW::Stage' has user-provided 'BALL::VIEW::Stage::Stage(const BALL::VIEW::Stage&)'
  301 |    Stage(const Stage& stage);
      |    ^~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:49,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/representation.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/representation.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/representation.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:49,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/representation.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/representation.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/representation.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:49,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/representation.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/representation.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/representation.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 84%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/KERNEL/serverWidget.C.o
/usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/KERNEL/serverWidget.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/serverWidget.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:49,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/serverWidget.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/objectCreator.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/serverWidget.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/serverWidget.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:49,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/serverWidget.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/objectCreator.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/serverWidget.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/serverWidget.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:49,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/serverWidget.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/objectCreator.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/serverWidget.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/serverWidget.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/serverWidget.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/message.h: In member function 'void BALL::VIEW::SceneMessage::setStage(BALL::VIEW::Stage)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/message.h:409:15: warning: implicitly-declared 'BALL::VIEW::Stage& BALL::VIEW::Stage::operator=(const BALL::VIEW::Stage&)' is deprecated [-Wdeprecated-copy]
  409 |    { stage_ = stage;}
      |               ^~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/message.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/serverWidget.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/stage.h:301:4: note: because 'BALL::VIEW::Stage' has user-provided 'BALL::VIEW::Stage::Stage(const BALL::VIEW::Stage&)'
  301 |    Stage(const Stage& stage);
      |    ^~~~~
[ 84%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/KERNEL/shortcutRegistry.C.o
/usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/KERNEL/shortcutRegistry.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/shortcutRegistry.C
[ 84%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/KERNEL/snapshotManagerInterface.C.o
/usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/KERNEL/snapshotManagerInterface.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/snapshotManagerInterface.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/snapshotManagerInterface.C:3:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/snapShot.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/snapShotManager.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/snapshotManagerInterface.h:4,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/snapshotManagerInterface.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/snapshotManagerInterface.C:3:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/snapShot.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/snapShotManager.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/snapshotManagerInterface.h:4,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/snapshotManagerInterface.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/snapshotManagerInterface.C:3:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/snapShot.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/snapShotManager.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/snapshotManagerInterface.h:4,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/snapshotManagerInterface.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 84%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/KERNEL/stage.C.o
/usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/KERNEL/stage.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/stage.C
[ 84%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/KERNEL/threads.C.o
/usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/KERNEL/threads.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/threads.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:49,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/threads.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/common.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/threads.h:5,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/threads.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:49,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/threads.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/common.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/threads.h:5,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/threads.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:49,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/threads.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/common.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/threads.h:5,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/threads.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/threads.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/message.h: In member function 'void BALL::VIEW::SceneMessage::setStage(BALL::VIEW::Stage)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/message.h:409:15: warning: implicitly-declared 'BALL::VIEW::Stage& BALL::VIEW::Stage::operator=(const BALL::VIEW::Stage&)' is deprecated [-Wdeprecated-copy]
  409 |    { stage_ = stage;}
      |               ^~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/message.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/threads.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/stage.h:301:4: note: because 'BALL::VIEW::Stage' has user-provided 'BALL::VIEW::Stage::Stage(const BALL::VIEW::Stage&)'
  301 |    Stage(const Stage& stage);
      |    ^~~~~
[ 84%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/KERNEL/UIOperationMode.C.o
/usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/KERNEL/UIOperationMode.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/KERNEL/UIOperationMode.C
[ 84%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/MODELS/atomBondModelBaseProcessor.C.o
/usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/MODELS/atomBondModelBaseProcessor.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/MODELS/atomBondModelBaseProcessor.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/MODELS/atomBondModelBaseProcessor.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/MODELS/modelProcessor.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/MODELS/atomBondModelBaseProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/MODELS/atomBondModelBaseProcessor.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/MODELS/atomBondModelBaseProcessor.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/MODELS/modelProcessor.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/MODELS/atomBondModelBaseProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/MODELS/atomBondModelBaseProcessor.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/MODELS/atomBondModelBaseProcessor.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/MODELS/modelProcessor.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/MODELS/atomBondModelBaseProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/MODELS/atomBondModelBaseProcessor.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/MODELS/atomBondModelBaseProcessor.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/MODELS/atomBondModelBaseProcessor.C: In member function 'void BALL::VIEW::AtomBondModelBaseProcessor::buildBondModels_()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:77:49: warning: implicitly-declared 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   77 | for (bond_iterator = (bond_container).beginBond(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/MODELS/atomBondModelBaseProcessor.C:96:5: note: in expansion of macro 'BALL_FOREACH_ATOM_BOND'
   96 |     BALL_FOREACH_ATOM_BOND(**atom_it, bond_it)
      |     ^~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/MODELS/atomBondModelBaseProcessor.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:47:15: note: because 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   47 |   BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:24:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   24 |  class ConstRandomAccessIterator
      |        ^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/MODELS/modelProcessor.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/MODELS/atomBondModelBaseProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/MODELS/atomBondModelBaseProcessor.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/MODELS/atomBondModelBaseProcessor.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/MODELS/atomBondModelBaseProcessor.C: In member function 'void BALL::VIEW::AtomBondModelBaseProcessor::buildBondModels_()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:77:49: note: synthesized method 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' first required here
   77 | for (bond_iterator = (bond_container).beginBond(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/MODELS/atomBondModelBaseProcessor.C:96:5: note: in expansion of macro 'BALL_FOREACH_ATOM_BOND'
   96 |     BALL_FOREACH_ATOM_BOND(**atom_it, bond_it)
      |     ^~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/MODELS/atomBondModelBaseProcessor.C: In member function 'virtual BALL::Processor::Result BALL::VIEW::AtomBondModelBaseProcessor::operator()(BALL::Composite&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/MODELS/atomBondModelBaseProcessor.C:160:39: warning: catching polymorphic type 'class BALL::Exception::GeneralException' by value [-Wcatch-value=]
  160 |    catch (Exception::GeneralException e)
      |                                       ^
[ 84%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/MODELS/backboneModel.C.o
/usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/MODELS/backboneModel.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/MODELS/backboneModel.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/secondaryStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/MODELS/backboneModel.h:19,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/MODELS/backboneModel.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/MODELS/modelProcessor.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/MODELS/backboneModel.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/MODELS/backboneModel.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/secondaryStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/MODELS/backboneModel.h:19,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/MODELS/backboneModel.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/MODELS/modelProcessor.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/MODELS/backboneModel.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/MODELS/backboneModel.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/secondaryStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/MODELS/backboneModel.h:19,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/MODELS/backboneModel.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/MODELS/modelProcessor.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/MODELS/backboneModel.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/MODELS/backboneModel.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/MODELS/backboneModel.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/MODELS/backboneModel.C: In member function 'virtual bool BALL::VIEW::AddBackboneModel::collectPositions(std::vector<BALL::Residue*>)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:64:49: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   64 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/MODELS/backboneModel.C:133:4: note: in expansion of macro 'BALL_FOREACH_ATOM'
  133 |    BALL_FOREACH_ATOM(residue, it)
      |    ^~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/MODELS/modelProcessor.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/MODELS/backboneModel.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/MODELS/backboneModel.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/MODELS/backboneModel.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:64:49: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   64 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/MODELS/backboneModel.C:217:4: note: in expansion of macro 'BALL_FOREACH_ATOM'
  217 |    BALL_FOREACH_ATOM(residue, it)
      |    ^~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/MODELS/modelProcessor.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/MODELS/backboneModel.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/MODELS/backboneModel.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
[ 84%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/MODELS/ballAndStickModel.C.o
/usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/MODELS/ballAndStickModel.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/MODELS/ballAndStickModel.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/MODELS/ballAndStickModel.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/MODELS/modelProcessor.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/MODELS/atomBondModelBaseProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/MODELS/ballAndStickModel.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/MODELS/ballAndStickModel.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/MODELS/ballAndStickModel.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/MODELS/modelProcessor.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/MODELS/atomBondModelBaseProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/MODELS/ballAndStickModel.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/MODELS/ballAndStickModel.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/MODELS/ballAndStickModel.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/MODELS/modelProcessor.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/MODELS/atomBondModelBaseProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/MODELS/ballAndStickModel.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/MODELS/ballAndStickModel.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/MODELS/ballAndStickModel.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/MODELS/ballAndStickModel.C: In member function 'void BALL::VIEW::AddBallAndStickModel::collectRingBonds_()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:77:49: warning: implicitly-declared 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   77 | for (bond_iterator = (bond_container).beginBond(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/MODELS/ballAndStickModel.C:457:5: note: in expansion of macro 'BALL_FOREACH_ATOM_BOND'
  457 |     BALL_FOREACH_ATOM_BOND(**atom_it, bond_it)
      |     ^~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/MODELS/ballAndStickModel.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/MODELS/ballAndStickModel.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:47:15: note: because 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   47 |   BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:24:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   24 |  class ConstRandomAccessIterator
      |        ^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/MODELS/modelProcessor.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/MODELS/atomBondModelBaseProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/MODELS/ballAndStickModel.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/MODELS/ballAndStickModel.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/MODELS/ballAndStickModel.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/MODELS/ballAndStickModel.C: In member function 'void BALL::VIEW::AddBallAndStickModel::collectRingBonds_()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:77:49: note: synthesized method 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' first required here
   77 | for (bond_iterator = (bond_container).beginBond(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/MODELS/ballAndStickModel.C:457:5: note: in expansion of macro 'BALL_FOREACH_ATOM_BOND'
  457 |     BALL_FOREACH_ATOM_BOND(**atom_it, bond_it)
      |     ^~~~~~~~~~~~~~~~~~~~~~
[ 84%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/MODELS/cartoonModel.C.o
/usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/MODELS/cartoonModel.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/MODELS/cartoonModel.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/secondaryStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/MODELS/backboneModel.h:19,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/MODELS/cartoonModel.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/MODELS/cartoonModel.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/MODELS/modelProcessor.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/MODELS/backboneModel.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/MODELS/cartoonModel.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/MODELS/cartoonModel.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/secondaryStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/MODELS/backboneModel.h:19,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/MODELS/cartoonModel.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/MODELS/cartoonModel.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/MODELS/modelProcessor.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/MODELS/backboneModel.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/MODELS/cartoonModel.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/MODELS/cartoonModel.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/secondaryStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/MODELS/backboneModel.h:19,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/MODELS/cartoonModel.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/MODELS/cartoonModel.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/MODELS/modelProcessor.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/MODELS/backboneModel.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/MODELS/cartoonModel.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/MODELS/cartoonModel.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/MODELS/cartoonModel.C:18:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/MODELS/cartoonModel.C: In member function 'bool BALL::VIEW::AddCartoonModel::assignNucleotideAtoms_(BALL::Residue&, BALL::Size, BALL::String*, BALL::Atom**)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:64:49: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   64 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/MODELS/cartoonModel.C:937:2: note: in expansion of macro 'BALL_FOREACH_ATOM'
  937 |  BALL_FOREACH_ATOM(r, it)
      |  ^~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/MODELS/modelProcessor.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/MODELS/backboneModel.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/MODELS/cartoonModel.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/MODELS/cartoonModel.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/MODELS/cartoonModel.C:18:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/MODELS/cartoonModel.C: In member function 'bool BALL::VIEW::AddCartoonModel::assignNucleotideAtoms_(BALL::Residue&, BALL::Size, BALL::String*, BALL::Atom**)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:64:49: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' first required here
   64 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/MODELS/cartoonModel.C:937:2: note: in expansion of macro 'BALL_FOREACH_ATOM'
  937 |  BALL_FOREACH_ATOM(r, it)
      |  ^~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/MODELS/cartoonModel.C: In member function 'void BALL::VIEW::AddCartoonModel::createSimpleNucleicAcid_(BALL::Position, BALL::Position)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:64:49: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   64 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/MODELS/cartoonModel.C:1045:4: note: in expansion of macro 'BALL_FOREACH_ATOM'
 1045 |    BALL_FOREACH_ATOM(*res, ait)
      |    ^~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/MODELS/modelProcessor.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/MODELS/backboneModel.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/MODELS/cartoonModel.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/MODELS/cartoonModel.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/MODELS/cartoonModel.C:18:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:64:49: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   64 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/MODELS/cartoonModel.C:1082:3: note: in expansion of macro 'BALL_FOREACH_ATOM'
 1082 |   BALL_FOREACH_ATOM(*partner, ait)
      |   ^~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/MODELS/modelProcessor.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/MODELS/backboneModel.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/MODELS/cartoonModel.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/MODELS/cartoonModel.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
[ 84%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/MODELS/colorByGridProcessor.C.o
/usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/MODELS/colorByGridProcessor.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/MODELS/colorByGridProcessor.C
[ 84%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/MODELS/colorProcessor.C.o
/usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/MODELS/colorProcessor.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/MODELS/colorProcessor.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/MODELS/colorProcessor.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/timeStamp.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DATATYPE/colorRGBA.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/geometricObject.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/MODELS/colorProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/MODELS/colorProcessor.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/MODELS/colorProcessor.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/timeStamp.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DATATYPE/colorRGBA.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/geometricObject.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/MODELS/colorProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/MODELS/colorProcessor.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/MODELS/colorProcessor.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/timeStamp.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DATATYPE/colorRGBA.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/geometricObject.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/MODELS/colorProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/MODELS/colorProcessor.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/MODELS/colorProcessor.C:12:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/MODELS/colorProcessor.C: In member function 'virtual void BALL::VIEW::ColorProcessor::createAtomGrid(const BALL::Composite*)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:64:49: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   64 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/MODELS/colorProcessor.C:227:7: note: in expansion of macro 'BALL_FOREACH_ATOM'
  227 |       BALL_FOREACH_ATOM(*acont, ait)
      |       ^~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/timeStamp.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DATATYPE/colorRGBA.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/geometricObject.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/MODELS/colorProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/MODELS/colorProcessor.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/MODELS/colorProcessor.C:12:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:64:49: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   64 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/MODELS/colorProcessor.C:246:6: note: in expansion of macro 'BALL_FOREACH_ATOM'
  246 |      BALL_FOREACH_ATOM(*acont, ait)
      |      ^~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/timeStamp.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DATATYPE/colorRGBA.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/geometricObject.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/MODELS/colorProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/MODELS/colorProcessor.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/MODELS/colorProcessor.h:19,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/MODELS/colorProcessor.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h: In instantiation of 'BALL::Index BALL::HashGrid3<Item>::getIndex_(const BALL::HashGridBox3<Item>&) const [with Item = const BALL::Atom*; BALL::Index = int]':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:1516:17:   required from 'bool BALL::HashGrid3<Item>::getIndices(const BALL::HashGridBox3<Item>&, BALL::Position&, BALL::Position&, BALL::Position&) const [with Item = const BALL::Atom*; BALL::Position = unsigned int]'
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/MODELS/colorProcessor.C:373:39:   required from here
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:1726:46: warning: comparison of integer expressions of different signedness: 'int' and 'BALL::Size' {aka 'unsigned int'} [-Wsign-compare]
 1726 |   if ((&box < &box_[0]) || (&box - &box_[0]  >= getSize()))
      |                            ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~
[ 84%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/MODELS/fieldLineCreator.C.o
/usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/MODELS/fieldLineCreator.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/MODELS/fieldLineCreator.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/MODELS/fieldLineCreator.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/MODELS/fieldLineCreator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/MODELS/fieldLineCreator.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/MODELS/fieldLineCreator.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/MODELS/fieldLineCreator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/MODELS/fieldLineCreator.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/MODELS/fieldLineCreator.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/MODELS/fieldLineCreator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/MODELS/fieldLineCreator.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/MODELS/fieldLineCreator.C: In member function 'void BALL::VIEW::FieldLineCreator::calculateLinePoints_(BALL::Vector3, std::vector<BALL::TVector3<float> >&, float)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/MODELS/fieldLineCreator.C:289:47: warning: variable 'size' set but not used [-Wunused-but-set-variable]
  289 |    TRegularData3D<Vector3>::IndexType         size = vector_grid_->getSize();
      |                                               ^~~~
[ 84%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/MODELS/forceModel.C.o
/usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/MODELS/forceModel.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/MODELS/forceModel.C
[ 84%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/MODELS/HBondModel.C.o
/usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/MODELS/HBondModel.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/MODELS/HBondModel.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/MODELS/HBondModel.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/MODELS/modelProcessor.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/MODELS/atomBondModelBaseProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/MODELS/HBondModel.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/MODELS/HBondModel.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/MODELS/HBondModel.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/MODELS/modelProcessor.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/MODELS/atomBondModelBaseProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/MODELS/HBondModel.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/MODELS/HBondModel.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/MODELS/HBondModel.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/MODELS/modelProcessor.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/MODELS/atomBondModelBaseProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/MODELS/HBondModel.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/MODELS/HBondModel.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 84%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/MODELS/labelModel.C.o
/usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/MODELS/labelModel.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/MODELS/labelModel.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/geometricProperties.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/MODELS/labelModel.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/MODELS/labelModel.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/MODELS/modelProcessor.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/MODELS/labelModel.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/MODELS/labelModel.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/geometricProperties.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/MODELS/labelModel.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/MODELS/labelModel.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/MODELS/modelProcessor.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/MODELS/labelModel.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/MODELS/labelModel.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/geometricProperties.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/MODELS/labelModel.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/MODELS/labelModel.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/MODELS/modelProcessor.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/MODELS/labelModel.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/MODELS/labelModel.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 84%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/MODELS/lineModel.C.o
/usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/MODELS/lineModel.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/MODELS/lineModel.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/MODELS/lineModel.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/MODELS/modelProcessor.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/MODELS/atomBondModelBaseProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/MODELS/lineModel.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/MODELS/lineModel.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/MODELS/lineModel.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/MODELS/modelProcessor.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/MODELS/atomBondModelBaseProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/MODELS/lineModel.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/MODELS/lineModel.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/MODELS/lineModel.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/MODELS/modelProcessor.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/MODELS/atomBondModelBaseProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/MODELS/lineModel.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/MODELS/lineModel.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 84%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/MODELS/modelProcessor.C.o
/usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/MODELS/modelProcessor.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/MODELS/modelProcessor.C
[ 84%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/MODELS/standardColorProcessor.C.o
/usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/MODELS/standardColorProcessor.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/MODELS/standardColorProcessor.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/MODELS/standardColorProcessor.h:19,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/MODELS/standardColorProcessor.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/timeStamp.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DATATYPE/colorRGBA.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/geometricObject.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/MODELS/colorProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/MODELS/standardColorProcessor.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/MODELS/standardColorProcessor.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/MODELS/standardColorProcessor.h:19,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/MODELS/standardColorProcessor.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/timeStamp.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DATATYPE/colorRGBA.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/geometricObject.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/MODELS/colorProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/MODELS/standardColorProcessor.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/MODELS/standardColorProcessor.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/MODELS/standardColorProcessor.h:19,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/MODELS/standardColorProcessor.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/timeStamp.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DATATYPE/colorRGBA.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/geometricObject.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/MODELS/colorProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/MODELS/standardColorProcessor.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/MODELS/standardColorProcessor.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/MODELS/standardColorProcessor.C: In member function 'virtual bool BALL::VIEW::ResidueNumberColorProcessor::start()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/MODELS/standardColorProcessor.C:328:25: warning: implicitly-declared 'BALL::VIEW::ColorMap& BALL::VIEW::ColorMap::operator=(const BALL::VIEW::ColorMap&)' is deprecated [-Wdeprecated-copy]
  328 |    table_ = ColorMap(500);
      |                         ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/MODELS/standardColorProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/MODELS/standardColorProcessor.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DATATYPE/colorMap.h:54:4: note: because 'BALL::VIEW::ColorMap' has user-provided 'BALL::VIEW::ColorMap::ColorMap(const BALL::VIEW::ColorMap&)'
   54 |    ColorMap(const ColorMap& color_Map);
      |    ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/MODELS/standardColorProcessor.C:343:44: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |      res_it = ((System*)*it)->beginResidue();
      |                                            ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/timeStamp.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DATATYPE/colorRGBA.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/geometricObject.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/MODELS/colorProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/MODELS/standardColorProcessor.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/MODELS/standardColorProcessor.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Residue; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::ResidueIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Residue; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::ResidueIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/MODELS/standardColorProcessor.C: In member function 'virtual bool BALL::VIEW::ResidueNumberColorProcessor::start()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/MODELS/standardColorProcessor.C:343:44: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>&)' first required here
  343 |      res_it = ((System*)*it)->beginResidue();
      |                                            ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/MODELS/standardColorProcessor.C:347:45: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  347 |      res_it = ((Protein*)*it)->beginResidue();
      |                                             ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/timeStamp.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DATATYPE/colorRGBA.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/geometricObject.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/MODELS/colorProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/MODELS/standardColorProcessor.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/MODELS/standardColorProcessor.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Residue; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::ResidueIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/MODELS/standardColorProcessor.C:351:43: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  351 |      res_it = ((Chain*)*it)->beginResidue();
      |                                           ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/timeStamp.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DATATYPE/colorRGBA.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/geometricObject.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/MODELS/colorProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/MODELS/standardColorProcessor.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/MODELS/standardColorProcessor.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Residue; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::ResidueIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/MODELS/standardColorProcessor.C:355:56: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  355 |      res_it = ((SecondaryStructure*)*it)->beginResidue();
      |                                                        ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/timeStamp.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DATATYPE/colorRGBA.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/geometricObject.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/MODELS/colorProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/MODELS/standardColorProcessor.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/MODELS/standardColorProcessor.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Residue; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::ResidueIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/MODELS/standardColorProcessor.C:16:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/MODELS/standardColorProcessor.C: In member function 'virtual BALL::Processor::Result BALL::VIEW::AtomDistanceColorProcessor::operator()(BALL::VIEW::GeometricObject*&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:64:49: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   64 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/MODELS/standardColorProcessor.C:666:7: note: in expansion of macro 'BALL_FOREACH_ATOM'
  666 |       BALL_FOREACH_ATOM(*acont, ait)
      |       ^~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/timeStamp.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DATATYPE/colorRGBA.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/geometricObject.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/MODELS/colorProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/MODELS/standardColorProcessor.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/MODELS/standardColorProcessor.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/MODELS/standardColorProcessor.C:16:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/MODELS/standardColorProcessor.C: In member function 'virtual BALL::Processor::Result BALL::VIEW::AtomDistanceColorProcessor::operator()(BALL::VIEW::GeometricObject*&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:64:49: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' first required here
   64 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/MODELS/standardColorProcessor.C:666:7: note: in expansion of macro 'BALL_FOREACH_ATOM'
  666 |       BALL_FOREACH_ATOM(*acont, ait)
      |       ^~~~~~~~~~~~~~~~~
[ 84%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/MODELS/surfaceModel.C.o
/usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/MODELS/surfaceModel.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/MODELS/surfaceModel.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/MODELS/surfaceModel.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/MODELS/modelProcessor.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/MODELS/surfaceModel.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/MODELS/surfaceModel.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/MODELS/surfaceModel.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/MODELS/modelProcessor.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/MODELS/surfaceModel.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/MODELS/surfaceModel.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/MODELS/surfaceModel.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/MODELS/modelProcessor.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/MODELS/surfaceModel.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/MODELS/surfaceModel.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/MODELS/surfaceModel.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/MODELS/surfaceModel.C: In member function 'virtual BALL::Processor::Result BALL::VIEW::AddSurfaceModel::operator()(BALL::Composite&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:64:49: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   64 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/MODELS/surfaceModel.C:54:5: note: in expansion of macro 'BALL_FOREACH_ATOM'
   54 |     BALL_FOREACH_ATOM(*(AtomContainer*) &composite, it)
      |     ^~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/MODELS/modelProcessor.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/MODELS/surfaceModel.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/MODELS/surfaceModel.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/MODELS/surfaceModel.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/MODELS/surfaceModel.C: In member function 'virtual BALL::Processor::Result BALL::VIEW::AddSurfaceModel::operator()(BALL::Composite&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:64:49: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' first required here
   64 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/MODELS/surfaceModel.C:54:5: note: in expansion of macro 'BALL_FOREACH_ATOM'
   54 |     BALL_FOREACH_ATOM(*(AtomContainer*) &composite, it)
      |     ^~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/solventExcludedSurface.h:45,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/surfaceProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/MODELS/surfaceModel.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/MODELS/surfaceModel.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h: In instantiation of 'BALL::Index BALL::HashGrid3<Item>::getIndex_(const BALL::HashGridBox3<Item>&) const [with Item = int; BALL::Index = int]':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:1667:20:   required from 'void BALL::HashGrid3<Item>::dump(std::ostream&, BALL::Size) const [with Item = int; std::ostream = std::basic_ostream<char>; BALL::Size = unsigned int]'
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:1625:7:   required from here
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:1726:46: warning: comparison of integer expressions of different signedness: 'int' and 'BALL::Size' {aka 'unsigned int'} [-Wsign-compare]
 1726 |   if ((&box < &box_[0]) || (&box - &box_[0]  >= getSize()))
      |                            ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~
[ 84%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/MODELS/vanDerWaalsModel.C.o
/usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/MODELS/vanDerWaalsModel.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/MODELS/vanDerWaalsModel.C
[ 84%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/PRIMITIVES/box.C.o
/usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/PRIMITIVES/box.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/PRIMITIVES/box.C
[ 87%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/PRIMITIVES/disc.C.o
/usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/PRIMITIVES/disc.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/PRIMITIVES/disc.C
[ 87%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/PRIMITIVES/gridVisualisation.C.o
/usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/PRIMITIVES/gridVisualisation.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/PRIMITIVES/gridVisualisation.C
[ 87%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/PRIMITIVES/label.C.o
/usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/PRIMITIVES/label.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/PRIMITIVES/label.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/PRIMITIVES/label.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/timeStamp.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DATATYPE/colorRGBA.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/geometricObject.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/PRIMITIVES/label.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/PRIMITIVES/label.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/PRIMITIVES/label.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/timeStamp.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DATATYPE/colorRGBA.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/geometricObject.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/PRIMITIVES/label.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/PRIMITIVES/label.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/PRIMITIVES/label.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/timeStamp.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DATATYPE/colorRGBA.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/geometricObject.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/PRIMITIVES/label.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/PRIMITIVES/label.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 87%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/PRIMITIVES/line.C.o
/usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/PRIMITIVES/line.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/PRIMITIVES/line.C
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/usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/PRIMITIVES/mesh.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/PRIMITIVES/mesh.C
[ 87%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/PRIMITIVES/multiLine.C.o
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[ 87%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/PRIMITIVES/quadMesh.C.o
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[ 87%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/PRIMITIVES/point.C.o
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[ 87%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/PRIMITIVES/simpleBox.C.o
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/usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/PRIMITIVES/tube.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/PRIMITIVES/tube.C
[ 87%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/PRIMITIVES/twoColoredLine.C.o
/usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/PRIMITIVES/twoColoredLine.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/PRIMITIVES/twoColoredLine.C
[ 87%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/PRIMITIVES/twoColoredTube.C.o
/usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/PRIMITIVES/twoColoredTube.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/PRIMITIVES/twoColoredTube.C
[ 87%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/RENDERING/RENDERERS/glRenderer.C.o
/usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/RENDERING/RENDERERS/glRenderer.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/RENDERING/RENDERERS/glRenderer.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:49,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/RENDERING/RENDERERS/glRenderer.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/representation.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/RENDERERS/renderer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/RENDERERS/glRenderer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/RENDERING/RENDERERS/glRenderer.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:49,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/RENDERING/RENDERERS/glRenderer.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/representation.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/RENDERERS/renderer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/RENDERERS/glRenderer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/RENDERING/RENDERERS/glRenderer.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:49,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/RENDERING/RENDERERS/glRenderer.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/representation.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/RENDERERS/renderer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/RENDERERS/glRenderer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/RENDERING/RENDERERS/glRenderer.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/RENDERING/RENDERERS/glRenderer.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor 'BALL::VIEW::FrameBufferFormat::FrameBufferFormat()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:53:38: warning: implicitly-declared 'constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)' is deprecated [-Wdeprecated-copy]
   53 |       pixelFormat(PixelFormat::RGB_32)
      |                                      ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/RENDERING/RENDERERS/glRenderer.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because 'BALL::VIEW::PixelFormat' has user-provided 'BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)'
  162 |    PixelFormat &operator=(const PixelFormat &f)
      |                 ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/RENDERING/RENDERERS/glRenderer.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor 'BALL::VIEW::FrameBufferFormat::FrameBufferFormat(BALL::Size, BALL::Size, const BALL::VIEW::PixelFormat&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:60:30: warning: implicitly-declared 'constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)' is deprecated [-Wdeprecated-copy]
   60 |       pixelFormat(pixelFormat)
      |                              ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/RENDERING/RENDERERS/glRenderer.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because 'BALL::VIEW::PixelFormat' has user-provided 'BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)'
  162 |    PixelFormat &operator=(const PixelFormat &f)
      |                 ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/RENDERING/RENDERERS/glRenderer.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor 'BALL::VIEW::FrameBufferFormat::FrameBufferFormat(BALL::Size, BALL::Size, BALL::Size, const BALL::VIEW::PixelFormat&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:69:30: warning: implicitly-declared 'constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)' is deprecated [-Wdeprecated-copy]
   69 |       pixelFormat(pixelFormat)
      |                              ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/RENDERING/RENDERERS/glRenderer.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because 'BALL::VIEW::PixelFormat' has user-provided 'BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)'
  162 |    PixelFormat &operator=(const PixelFormat &f)
      |                 ^~~~~~~~
[ 87%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/RENDERING/RENDERERS/renderer.C.o
/usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/RENDERING/RENDERERS/renderer.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/RENDERING/RENDERERS/renderer.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/RENDERING/RENDERERS/renderer.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor 'BALL::VIEW::FrameBufferFormat::FrameBufferFormat()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:53:38: warning: implicitly-declared 'constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)' is deprecated [-Wdeprecated-copy]
   53 |       pixelFormat(PixelFormat::RGB_32)
      |                                      ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/RENDERING/RENDERERS/renderer.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because 'BALL::VIEW::PixelFormat' has user-provided 'BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)'
  162 |    PixelFormat &operator=(const PixelFormat &f)
      |                 ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/RENDERING/RENDERERS/renderer.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor 'BALL::VIEW::FrameBufferFormat::FrameBufferFormat(BALL::Size, BALL::Size, const BALL::VIEW::PixelFormat&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:60:30: warning: implicitly-declared 'constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)' is deprecated [-Wdeprecated-copy]
   60 |       pixelFormat(pixelFormat)
      |                              ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/RENDERING/RENDERERS/renderer.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because 'BALL::VIEW::PixelFormat' has user-provided 'BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)'
  162 |    PixelFormat &operator=(const PixelFormat &f)
      |                 ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/RENDERING/RENDERERS/renderer.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor 'BALL::VIEW::FrameBufferFormat::FrameBufferFormat(BALL::Size, BALL::Size, BALL::Size, const BALL::VIEW::PixelFormat&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:69:30: warning: implicitly-declared 'constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)' is deprecated [-Wdeprecated-copy]
   69 |       pixelFormat(pixelFormat)
      |                              ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/RENDERING/RENDERERS/renderer.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because 'BALL::VIEW::PixelFormat' has user-provided 'BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)'
  162 |    PixelFormat &operator=(const PixelFormat &f)
      |                 ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/RENDERING/RENDERERS/renderer.C: In member function 'virtual void BALL::VIEW::Renderer::setupEnvironmentMap(const QImage&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/RENDERING/RENDERERS/renderer.C:165:52: warning: unused parameter 'image' [-Wunused-parameter]
  165 |   void Renderer::setupEnvironmentMap(const QImage& image)
      |                                      ~~~~~~~~~~~~~~^~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/RENDERING/RENDERERS/renderer.C: In member function 'virtual void BALL::VIEW::Renderer::pickObjects(BALL::Position, BALL::Position, BALL::Position, BALL::Position, std::__cxx11::list<BALL::VIEW::GeometricObject*>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/RENDERING/RENDERERS/renderer.C:253:39: warning: unused parameter 'x1' [-Wunused-parameter]
  253 |   void Renderer::pickObjects(Position x1, Position y1, Position x2, Position y2,
      |                              ~~~~~~~~~^~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/RENDERING/RENDERERS/renderer.C:253:52: warning: unused parameter 'y1' [-Wunused-parameter]
  253 |   void Renderer::pickObjects(Position x1, Position y1, Position x2, Position y2,
      |                                           ~~~~~~~~~^~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/RENDERING/RENDERERS/renderer.C:253:65: warning: unused parameter 'x2' [-Wunused-parameter]
  253 |   void Renderer::pickObjects(Position x1, Position y1, Position x2, Position y2,
      |                                                        ~~~~~~~~~^~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/RENDERING/RENDERERS/renderer.C:253:78: warning: unused parameter 'y2' [-Wunused-parameter]
  253 |   void Renderer::pickObjects(Position x1, Position y1, Position x2, Position y2,
      |                                                                     ~~~~~~~~~^~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/RENDERING/RENDERERS/renderer.C:254:58: warning: unused parameter 'objects' [-Wunused-parameter]
  254 |                             std::list<GeometricObject*>& objects)
      |                             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/RENDERING/RENDERERS/renderer.C: In member function 'virtual void BALL::VIEW::Renderer::getFrustum(float&, float&, float&, float&, float&, float&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/RENDERING/RENDERERS/renderer.C:259:36: warning: unused parameter 'near_f' [-Wunused-parameter]
  259 |   void Renderer::getFrustum(float& near_f, float& far_f, float& left_f, float& right_f, float& top_f, float& bottom_f)
      |                             ~~~~~~~^~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/RENDERING/RENDERERS/renderer.C:259:51: warning: unused parameter 'far_f' [-Wunused-parameter]
  259 |   void Renderer::getFrustum(float& near_f, float& far_f, float& left_f, float& right_f, float& top_f, float& bottom_f)
      |                                            ~~~~~~~^~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/RENDERING/RENDERERS/renderer.C:259:65: warning: unused parameter 'left_f' [-Wunused-parameter]
  259 |   void Renderer::getFrustum(float& near_f, float& far_f, float& left_f, float& right_f, float& top_f, float& bottom_f)
      |                                                          ~~~~~~~^~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/RENDERING/RENDERERS/renderer.C:259:80: warning: unused parameter 'right_f' [-Wunused-parameter]
  259 |   void Renderer::getFrustum(float& near_f, float& far_f, float& left_f, float& right_f, float& top_f, float& bottom_f)
      |                                                                         ~~~~~~~^~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/RENDERING/RENDERERS/renderer.C:259:96: warning: unused parameter 'top_f' [-Wunused-parameter]
  259 |   void Renderer::getFrustum(float& near_f, float& far_f, float& left_f, float& right_f, float& top_f, float& bottom_f)
      |                                                                                         ~~~~~~~^~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/RENDERING/RENDERERS/renderer.C:259:110: warning: unused parameter 'bottom_f' [-Wunused-parameter]
  259 |   void Renderer::getFrustum(float& near_f, float& far_f, float& left_f, float& right_f, float& top_f, float& bottom_f)
      |                                                                                                       ~~~~~~~^~~~~~~~
[ 87%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/RENDERING/RENDERERS/POVRenderer.C.o
/usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/RENDERING/RENDERERS/POVRenderer.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/RENDERING/RENDERERS/POVRenderer.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:49,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/RENDERING/RENDERERS/POVRenderer.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/representation.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/RENDERERS/renderer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/RENDERERS/POVRenderer.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/RENDERING/RENDERERS/POVRenderer.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:49,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/RENDERING/RENDERERS/POVRenderer.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/representation.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/RENDERERS/renderer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/RENDERERS/POVRenderer.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/RENDERING/RENDERERS/POVRenderer.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:49,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/RENDERING/RENDERERS/POVRenderer.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/representation.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/RENDERERS/renderer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/RENDERERS/POVRenderer.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/RENDERING/RENDERERS/POVRenderer.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/RENDERING/RENDERERS/POVRenderer.C:12:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor 'BALL::VIEW::FrameBufferFormat::FrameBufferFormat()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:53:38: warning: implicitly-declared 'constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)' is deprecated [-Wdeprecated-copy]
   53 |       pixelFormat(PixelFormat::RGB_32)
      |                                      ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/RENDERING/RENDERERS/POVRenderer.C:12:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because 'BALL::VIEW::PixelFormat' has user-provided 'BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)'
  162 |    PixelFormat &operator=(const PixelFormat &f)
      |                 ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/RENDERING/RENDERERS/POVRenderer.C:12:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor 'BALL::VIEW::FrameBufferFormat::FrameBufferFormat(BALL::Size, BALL::Size, const BALL::VIEW::PixelFormat&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:60:30: warning: implicitly-declared 'constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)' is deprecated [-Wdeprecated-copy]
   60 |       pixelFormat(pixelFormat)
      |                              ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/RENDERING/RENDERERS/POVRenderer.C:12:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because 'BALL::VIEW::PixelFormat' has user-provided 'BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)'
  162 |    PixelFormat &operator=(const PixelFormat &f)
      |                 ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/RENDERING/RENDERERS/POVRenderer.C:12:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor 'BALL::VIEW::FrameBufferFormat::FrameBufferFormat(BALL::Size, BALL::Size, BALL::Size, const BALL::VIEW::PixelFormat&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:69:30: warning: implicitly-declared 'constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)' is deprecated [-Wdeprecated-copy]
   69 |       pixelFormat(pixelFormat)
      |                              ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/RENDERING/RENDERERS/POVRenderer.C:12:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because 'BALL::VIEW::PixelFormat' has user-provided 'BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)'
  162 |    PixelFormat &operator=(const PixelFormat &f)
      |                 ^~~~~~~~
[ 87%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/RENDERING/RENDERERS/STLRenderer.C.o
/usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/RENDERING/RENDERERS/STLRenderer.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/RENDERING/RENDERERS/STLRenderer.C
[ 87%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/RENDERING/RENDERERS/tilingRenderer.C.o
/usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/RENDERING/RENDERERS/tilingRenderer.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/RENDERING/RENDERERS/tilingRenderer.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/RENDERERS/tilingRenderer.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/RENDERING/RENDERERS/tilingRenderer.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor 'BALL::VIEW::FrameBufferFormat::FrameBufferFormat()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:53:38: warning: implicitly-declared 'constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)' is deprecated [-Wdeprecated-copy]
   53 |       pixelFormat(PixelFormat::RGB_32)
      |                                      ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/RENDERERS/tilingRenderer.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/RENDERING/RENDERERS/tilingRenderer.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because 'BALL::VIEW::PixelFormat' has user-provided 'BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)'
  162 |    PixelFormat &operator=(const PixelFormat &f)
      |                 ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/RENDERERS/tilingRenderer.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/RENDERING/RENDERERS/tilingRenderer.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor 'BALL::VIEW::FrameBufferFormat::FrameBufferFormat(BALL::Size, BALL::Size, const BALL::VIEW::PixelFormat&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:60:30: warning: implicitly-declared 'constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)' is deprecated [-Wdeprecated-copy]
   60 |       pixelFormat(pixelFormat)
      |                              ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/RENDERERS/tilingRenderer.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/RENDERING/RENDERERS/tilingRenderer.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because 'BALL::VIEW::PixelFormat' has user-provided 'BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)'
  162 |    PixelFormat &operator=(const PixelFormat &f)
      |                 ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/RENDERERS/tilingRenderer.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/RENDERING/RENDERERS/tilingRenderer.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor 'BALL::VIEW::FrameBufferFormat::FrameBufferFormat(BALL::Size, BALL::Size, BALL::Size, const BALL::VIEW::PixelFormat&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:69:30: warning: implicitly-declared 'constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)' is deprecated [-Wdeprecated-copy]
   69 |       pixelFormat(pixelFormat)
      |                              ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/RENDERERS/tilingRenderer.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/RENDERING/RENDERERS/tilingRenderer.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because 'BALL::VIEW::PixelFormat' has user-provided 'BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)'
  162 |    PixelFormat &operator=(const PixelFormat &f)
      |                 ^~~~~~~~
[ 87%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/RENDERING/RENDERERS/VRMLRenderer.C.o
/usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/RENDERING/RENDERERS/VRMLRenderer.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/RENDERING/RENDERERS/VRMLRenderer.C
[ 87%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/RENDERING/RENDERERS/raytracingRenderer.C.o
/usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/RENDERING/RENDERERS/raytracingRenderer.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/RENDERING/RENDERERS/raytracingRenderer.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/RENDERERS/bufferedRenderer.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/RENDERERS/raytracingRenderer.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/RENDERING/RENDERERS/raytracingRenderer.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor 'BALL::VIEW::FrameBufferFormat::FrameBufferFormat()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:53:38: warning: implicitly-declared 'constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)' is deprecated [-Wdeprecated-copy]
   53 |       pixelFormat(PixelFormat::RGB_32)
      |                                      ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/RENDERERS/bufferedRenderer.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/RENDERERS/raytracingRenderer.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/RENDERING/RENDERERS/raytracingRenderer.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because 'BALL::VIEW::PixelFormat' has user-provided 'BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)'
  162 |    PixelFormat &operator=(const PixelFormat &f)
      |                 ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/RENDERERS/bufferedRenderer.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/RENDERERS/raytracingRenderer.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/RENDERING/RENDERERS/raytracingRenderer.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor 'BALL::VIEW::FrameBufferFormat::FrameBufferFormat(BALL::Size, BALL::Size, const BALL::VIEW::PixelFormat&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:60:30: warning: implicitly-declared 'constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)' is deprecated [-Wdeprecated-copy]
   60 |       pixelFormat(pixelFormat)
      |                              ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/RENDERERS/bufferedRenderer.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/RENDERERS/raytracingRenderer.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/RENDERING/RENDERERS/raytracingRenderer.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because 'BALL::VIEW::PixelFormat' has user-provided 'BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)'
  162 |    PixelFormat &operator=(const PixelFormat &f)
      |                 ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/RENDERERS/bufferedRenderer.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/RENDERERS/raytracingRenderer.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/RENDERING/RENDERERS/raytracingRenderer.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor 'BALL::VIEW::FrameBufferFormat::FrameBufferFormat(BALL::Size, BALL::Size, BALL::Size, const BALL::VIEW::PixelFormat&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:69:30: warning: implicitly-declared 'constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)' is deprecated [-Wdeprecated-copy]
   69 |       pixelFormat(pixelFormat)
      |                              ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/RENDERERS/bufferedRenderer.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/RENDERERS/raytracingRenderer.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/RENDERING/RENDERERS/raytracingRenderer.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because 'BALL::VIEW::PixelFormat' has user-provided 'BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)'
  162 |    PixelFormat &operator=(const PixelFormat &f)
      |                 ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/RENDERING/RENDERERS/raytracingRenderer.C: In member function 'virtual BALL::VIEW::Resolution BALL::VIEW::RaytracingRenderer::getSupportedResolution(const BALL::VIEW::Resolution&, const BALL::VIEW::Resolution&, const BALL::VIEW::PixelFormat&) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/RENDERING/RENDERERS/raytracingRenderer.C:18:22: warning: unused parameter 'min' [-Wunused-parameter]
   18 |    const Resolution &min, const Resolution &max,
      |    ~~~~~~~~~~~~~~~~~~^~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/RENDERING/RENDERERS/raytracingRenderer.C: In member function 'virtual std::vector<float> BALL::VIEW::RaytracingRenderer::intersectRaysWithGeometry(const std::vector<BALL::TVector3<float> >&, const std::vector<BALL::TVector3<float> >&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/RENDERING/RENDERERS/raytracingRenderer.C:33:96: warning: unused parameter 'origins' [-Wunused-parameter]
   33 |   std::vector<float> RaytracingRenderer::intersectRaysWithGeometry(const std::vector<Vector3>& origins,
      |                                                                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/RENDERING/RENDERERS/raytracingRenderer.C:34:96: warning: unused parameter 'directions' [-Wunused-parameter]
   34 |                                                                    const std::vector<Vector3>& directions)
      |                                                                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
[ 87%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/RENDERING/RENDERERS/XML3DRenderer.C.o
/usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/RENDERING/RENDERERS/XML3DRenderer.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/RENDERING/RENDERERS/XML3DRenderer.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:49,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/RENDERING/RENDERERS/XML3DRenderer.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/representation.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/RENDERERS/renderer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/RENDERERS/XML3DRenderer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/RENDERING/RENDERERS/XML3DRenderer.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:49,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/RENDERING/RENDERERS/XML3DRenderer.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/representation.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/RENDERERS/renderer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/RENDERERS/XML3DRenderer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/RENDERING/RENDERERS/XML3DRenderer.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:49,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/RENDERING/RENDERERS/XML3DRenderer.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/representation.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/RENDERERS/renderer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/RENDERERS/XML3DRenderer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/RENDERING/RENDERERS/XML3DRenderer.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/RENDERING/RENDERERS/XML3DRenderer.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor 'BALL::VIEW::FrameBufferFormat::FrameBufferFormat()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:53:38: warning: implicitly-declared 'constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)' is deprecated [-Wdeprecated-copy]
   53 |       pixelFormat(PixelFormat::RGB_32)
      |                                      ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/RENDERING/RENDERERS/XML3DRenderer.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because 'BALL::VIEW::PixelFormat' has user-provided 'BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)'
  162 |    PixelFormat &operator=(const PixelFormat &f)
      |                 ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/RENDERING/RENDERERS/XML3DRenderer.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor 'BALL::VIEW::FrameBufferFormat::FrameBufferFormat(BALL::Size, BALL::Size, const BALL::VIEW::PixelFormat&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:60:30: warning: implicitly-declared 'constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)' is deprecated [-Wdeprecated-copy]
   60 |       pixelFormat(pixelFormat)
      |                              ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/RENDERING/RENDERERS/XML3DRenderer.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because 'BALL::VIEW::PixelFormat' has user-provided 'BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)'
  162 |    PixelFormat &operator=(const PixelFormat &f)
      |                 ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/RENDERING/RENDERERS/XML3DRenderer.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor 'BALL::VIEW::FrameBufferFormat::FrameBufferFormat(BALL::Size, BALL::Size, BALL::Size, const BALL::VIEW::PixelFormat&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:69:30: warning: implicitly-declared 'constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)' is deprecated [-Wdeprecated-copy]
   69 |       pixelFormat(pixelFormat)
      |                              ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/RENDERING/RENDERERS/XML3DRenderer.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because 'BALL::VIEW::PixelFormat' has user-provided 'BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)'
  162 |    PixelFormat &operator=(const PixelFormat &f)
      |                 ^~~~~~~~
[ 87%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/RENDERING/camera.C.o
/usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/RENDERING/camera.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/RENDERING/camera.C
[ 87%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/RENDERING/glDisplayList.C.o
/usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/RENDERING/glDisplayList.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/RENDERING/glDisplayList.C
[ 87%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/RENDERING/renderSetup.C.o
/usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/RENDERING/renderSetup.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/RENDERING/renderSetup.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderSetup.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/RENDERING/renderSetup.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor 'BALL::VIEW::FrameBufferFormat::FrameBufferFormat()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:53:38: warning: implicitly-declared 'constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)' is deprecated [-Wdeprecated-copy]
   53 |       pixelFormat(PixelFormat::RGB_32)
      |                                      ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderSetup.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/RENDERING/renderSetup.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because 'BALL::VIEW::PixelFormat' has user-provided 'BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)'
  162 |    PixelFormat &operator=(const PixelFormat &f)
      |                 ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderSetup.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/RENDERING/renderSetup.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor 'BALL::VIEW::FrameBufferFormat::FrameBufferFormat(BALL::Size, BALL::Size, const BALL::VIEW::PixelFormat&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:60:30: warning: implicitly-declared 'constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)' is deprecated [-Wdeprecated-copy]
   60 |       pixelFormat(pixelFormat)
      |                              ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderSetup.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/RENDERING/renderSetup.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because 'BALL::VIEW::PixelFormat' has user-provided 'BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)'
  162 |    PixelFormat &operator=(const PixelFormat &f)
      |                 ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderSetup.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/RENDERING/renderSetup.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor 'BALL::VIEW::FrameBufferFormat::FrameBufferFormat(BALL::Size, BALL::Size, BALL::Size, const BALL::VIEW::PixelFormat&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:69:30: warning: implicitly-declared 'constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)' is deprecated [-Wdeprecated-copy]
   69 |       pixelFormat(pixelFormat)
      |                              ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderSetup.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/RENDERING/renderSetup.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because 'BALL::VIEW::PixelFormat' has user-provided 'BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)'
  162 |    PixelFormat &operator=(const PixelFormat &f)
      |                 ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/RENDERING/renderSetup.C: In copy constructor 'BALL::VIEW::RenderSetup::RenderSetup(const BALL::VIEW::RenderSetup&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/RENDERING/renderSetup.C:55:3: warning: base class 'class boost::enable_shared_from_this<BALL::VIEW::RenderSetup>' should be explicitly initialized in the copy constructor [-Wextra]
   55 |   RenderSetup::RenderSetup(const RenderSetup& rs)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/RENDERING/renderSetup.C: In member function 'bool BALL::VIEW::RenderSetup::exportPNG(const BALL::String&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/RENDERING/renderSetup.C:445:11: warning: unused variable 'line_width' [-Wunused-variable]
  445 |      Size line_width = width*3;
      |           ^~~~~~~~~~
[ 90%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/RENDERING/vertexBuffer.C.o
/usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/RENDERING/vertexBuffer.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/RENDERING/vertexBuffer.C
[ 90%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/RENDERING/glRenderWindow.C.o
/usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/RENDERING/glRenderWindow.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/RENDERING/glRenderWindow.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/glRenderWindow.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/RENDERING/glRenderWindow.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor 'BALL::VIEW::FrameBufferFormat::FrameBufferFormat()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:53:38: warning: implicitly-declared 'constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)' is deprecated [-Wdeprecated-copy]
   53 |       pixelFormat(PixelFormat::RGB_32)
      |                                      ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/glRenderWindow.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/RENDERING/glRenderWindow.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because 'BALL::VIEW::PixelFormat' has user-provided 'BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)'
  162 |    PixelFormat &operator=(const PixelFormat &f)
      |                 ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/glRenderWindow.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/RENDERING/glRenderWindow.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor 'BALL::VIEW::FrameBufferFormat::FrameBufferFormat(BALL::Size, BALL::Size, const BALL::VIEW::PixelFormat&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:60:30: warning: implicitly-declared 'constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)' is deprecated [-Wdeprecated-copy]
   60 |       pixelFormat(pixelFormat)
      |                              ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/glRenderWindow.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/RENDERING/glRenderWindow.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because 'BALL::VIEW::PixelFormat' has user-provided 'BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)'
  162 |    PixelFormat &operator=(const PixelFormat &f)
      |                 ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/glRenderWindow.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/RENDERING/glRenderWindow.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor 'BALL::VIEW::FrameBufferFormat::FrameBufferFormat(BALL::Size, BALL::Size, BALL::Size, const BALL::VIEW::PixelFormat&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:69:30: warning: implicitly-declared 'constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)' is deprecated [-Wdeprecated-copy]
   69 |       pixelFormat(pixelFormat)
      |                              ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/glRenderWindow.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/RENDERING/glRenderWindow.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because 'BALL::VIEW::PixelFormat' has user-provided 'BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)'
  162 |    PixelFormat &operator=(const PixelFormat &f)
      |                 ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:49,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/RENDERING/glRenderWindow.C:13:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/common.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/RENDERING/glRenderWindow.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:49,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/RENDERING/glRenderWindow.C:13:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/common.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/RENDERING/glRenderWindow.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:49,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/RENDERING/glRenderWindow.C:13:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/common.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/RENDERING/glRenderWindow.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 90%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/RENDERING/glOffscreenTarget.C.o
/usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/RENDERING/glOffscreenTarget.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/RENDERING/glOffscreenTarget.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/glOffscreenTarget.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/RENDERING/glOffscreenTarget.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor 'BALL::VIEW::FrameBufferFormat::FrameBufferFormat()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:53:38: warning: implicitly-declared 'constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)' is deprecated [-Wdeprecated-copy]
   53 |       pixelFormat(PixelFormat::RGB_32)
      |                                      ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/glOffscreenTarget.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/RENDERING/glOffscreenTarget.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because 'BALL::VIEW::PixelFormat' has user-provided 'BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)'
  162 |    PixelFormat &operator=(const PixelFormat &f)
      |                 ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/glOffscreenTarget.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/RENDERING/glOffscreenTarget.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor 'BALL::VIEW::FrameBufferFormat::FrameBufferFormat(BALL::Size, BALL::Size, const BALL::VIEW::PixelFormat&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:60:30: warning: implicitly-declared 'constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)' is deprecated [-Wdeprecated-copy]
   60 |       pixelFormat(pixelFormat)
      |                              ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/glOffscreenTarget.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/RENDERING/glOffscreenTarget.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because 'BALL::VIEW::PixelFormat' has user-provided 'BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)'
  162 |    PixelFormat &operator=(const PixelFormat &f)
      |                 ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/glOffscreenTarget.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/RENDERING/glOffscreenTarget.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor 'BALL::VIEW::FrameBufferFormat::FrameBufferFormat(BALL::Size, BALL::Size, BALL::Size, const BALL::VIEW::PixelFormat&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:69:30: warning: implicitly-declared 'constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)' is deprecated [-Wdeprecated-copy]
   69 |       pixelFormat(pixelFormat)
      |                              ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/glOffscreenTarget.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/RENDERING/glOffscreenTarget.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because 'BALL::VIEW::PixelFormat' has user-provided 'BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)'
  162 |    PixelFormat &operator=(const PixelFormat &f)
      |                 ^~~~~~~~
[ 90%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/RENDERING/renderWindow.C.o
/usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/RENDERING/renderWindow.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/RENDERING/renderWindow.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/RENDERING/renderWindow.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor 'BALL::VIEW::FrameBufferFormat::FrameBufferFormat()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:53:38: warning: implicitly-declared 'constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)' is deprecated [-Wdeprecated-copy]
   53 |       pixelFormat(PixelFormat::RGB_32)
      |                                      ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/RENDERING/renderWindow.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because 'BALL::VIEW::PixelFormat' has user-provided 'BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)'
  162 |    PixelFormat &operator=(const PixelFormat &f)
      |                 ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/RENDERING/renderWindow.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor 'BALL::VIEW::FrameBufferFormat::FrameBufferFormat(BALL::Size, BALL::Size, const BALL::VIEW::PixelFormat&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:60:30: warning: implicitly-declared 'constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)' is deprecated [-Wdeprecated-copy]
   60 |       pixelFormat(pixelFormat)
      |                              ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/RENDERING/renderWindow.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because 'BALL::VIEW::PixelFormat' has user-provided 'BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)'
  162 |    PixelFormat &operator=(const PixelFormat &f)
      |                 ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/RENDERING/renderWindow.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor 'BALL::VIEW::FrameBufferFormat::FrameBufferFormat(BALL::Size, BALL::Size, BALL::Size, const BALL::VIEW::PixelFormat&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:69:30: warning: implicitly-declared 'constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)' is deprecated [-Wdeprecated-copy]
   69 |       pixelFormat(pixelFormat)
      |                              ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/RENDERING/renderWindow.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because 'BALL::VIEW::PixelFormat' has user-provided 'BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)'
  162 |    PixelFormat &operator=(const PixelFormat &f)
      |                 ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/RENDERING/renderWindow.C: In instantiation of 'BALL::VIEW::TRenderWindow<taPixelDatatype>::TRenderWindow() [with taPixelDatatype = char]':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/RENDERING/renderWindow.C:102:18:   required from here
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/RENDERING/renderWindow.C:20:24: warning: implicitly-declared 'constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)' is deprecated [-Wdeprecated-copy]
   20 |    do_not_resize_(false)
      |                        ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/RENDERING/renderWindow.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because 'BALL::VIEW::PixelFormat' has user-provided 'BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)'
  162 |    PixelFormat &operator=(const PixelFormat &f)
      |                 ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/RENDERING/renderWindow.C: In instantiation of 'BALL::VIEW::TRenderWindow<taPixelDatatype>::TRenderWindow() [with taPixelDatatype = float]':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/RENDERING/renderWindow.C:103:18:   required from here
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/RENDERING/renderWindow.C:20:24: warning: implicitly-declared 'constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)' is deprecated [-Wdeprecated-copy]
   20 |    do_not_resize_(false)
      |                        ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/RENDERING/renderWindow.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because 'BALL::VIEW::PixelFormat' has user-provided 'BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)'
  162 |    PixelFormat &operator=(const PixelFormat &f)
      |                 ^~~~~~~~
[ 90%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/RENDERING/pixelFormat.C.o
/usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/RENDERING/pixelFormat.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/RENDERING/pixelFormat.C
[ 90%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/WIDGETS/colorButton.C.o
/usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/WIDGETS/colorButton.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/colorButton.C
[ 90%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/WIDGETS/colorTable.C.o
/usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/WIDGETS/colorTable.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/colorTable.C
[ 90%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/WIDGETS/datasetControl.C.o
/usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/WIDGETS/datasetControl.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/datasetControl.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/datasetControl.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/datasetControl.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/datasetControl.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/datasetControl.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/datasetControl.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/datasetControl.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/datasetControl.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/datasetControl.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/datasetControl.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/datasetControl.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/datasetControl.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/datasetControl.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/datasetControl.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/message.h: In member function 'void BALL::VIEW::SceneMessage::setStage(BALL::VIEW::Stage)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/message.h:409:15: warning: implicitly-declared 'BALL::VIEW::Stage& BALL::VIEW::Stage::operator=(const BALL::VIEW::Stage&)' is deprecated [-Wdeprecated-copy]
  409 |    { stage_ = stage;}
      |               ^~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/message.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/datasetControl.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/stage.h:301:4: note: because 'BALL::VIEW::Stage' has user-provided 'BALL::VIEW::Stage::Stage(const BALL::VIEW::Stage&)'
  301 |    Stage(const Stage& stage);
      |    ^~~~~
[ 90%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/WIDGETS/dockingController.C.o
/usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/WIDGETS/dockingController.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/dockingController.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/assignBondOrderProcessor.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DIALOGS/assignBondOrderConfigurationDialog.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/molecularStructure.h:37,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/dockingController.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/expressionPredicate.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/expressionTree.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/expressionParser.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/expression.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/ruleEvaluator.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/ruleProcessor.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/radiusRuleProcessor.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DIALOGS/dockDialog.h:18,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/dockingController.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/dockingController.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/assignBondOrderProcessor.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DIALOGS/assignBondOrderConfigurationDialog.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/molecularStructure.h:37,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/dockingController.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/expressionPredicate.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/expressionTree.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/expressionParser.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/expression.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/ruleEvaluator.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/ruleProcessor.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/radiusRuleProcessor.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DIALOGS/dockDialog.h:18,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/dockingController.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/dockingController.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/assignBondOrderProcessor.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DIALOGS/assignBondOrderConfigurationDialog.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/molecularStructure.h:37,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/dockingController.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/expressionPredicate.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/expressionTree.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/expressionParser.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/expression.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/ruleEvaluator.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/ruleProcessor.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/radiusRuleProcessor.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DIALOGS/dockDialog.h:18,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/dockingController.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/dockingController.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/embeddable.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/modularWidget.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/dockingController.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/dockingController.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94ParametersBase::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:43:3: note: in expansion of macro 'BALL_CREATE'
   43 |   BALL_CREATE(MMFF94ParametersBase)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/molecularStructure.h:57,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/dockingController.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/embeddable.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/modularWidget.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/dockingController.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/dockingController.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:3: note: in expansion of macro 'BALL_CREATE'
  217 |   BALL_CREATE(MMFF94StretchParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/molecularStructure.h:57,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/dockingController.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:226:34: note: because 'BALL::MMFF94StretchParameters' has user-provided 'const BALL::MMFF94StretchParameters& BALL::MMFF94StretchParameters::operator=(const BALL::MMFF94StretchParameters&)'
  226 |   const MMFF94StretchParameters& operator = (const MMFF94StretchParameters& param)
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:185:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  185 |  class BALL_EXPORT MMFF94StretchParameters:
      |                    ^~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/embeddable.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/modularWidget.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/dockingController.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/dockingController.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:3: note: in expansion of macro 'BALL_CREATE'
  217 |   BALL_CREATE(MMFF94StretchParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94BendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:3: note: in expansion of macro 'BALL_CREATE'
  271 |   BALL_CREATE(MMFF94BendParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/molecularStructure.h:57,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/dockingController.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:280:31: note: because 'BALL::MMFF94BendParameters' has user-provided 'const BALL::MMFF94BendParameters& BALL::MMFF94BendParameters::operator=(const BALL::MMFF94BendParameters&)'
  280 |   const MMFF94BendParameters& operator = (const MMFF94BendParameters& param)
      |                               ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:263:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  263 |  class BALL_EXPORT MMFF94BendParameters
      |                    ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/embeddable.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/modularWidget.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/dockingController.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/dockingController.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94BendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:3: note: in expansion of macro 'BALL_CREATE'
  271 |   BALL_CREATE(MMFF94BendParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:3: note: in expansion of macro 'BALL_CREATE'
  318 |   BALL_CREATE(MMFF94StretchBendParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/molecularStructure.h:57,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/dockingController.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:327:38: note: because 'BALL::MMFF94StretchBendParameters' has user-provided 'const BALL::MMFF94StretchBendParameters& BALL::MMFF94StretchBendParameters::operator=(const BALL::MMFF94StretchBendParameters&)'
  327 |   const MMFF94StretchBendParameters& operator = (const MMFF94StretchBendParameters& param)
      |                                      ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:310:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  310 |  class BALL_EXPORT MMFF94StretchBendParameters
      |                    ^~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/embeddable.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/modularWidget.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/dockingController.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/dockingController.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:3: note: in expansion of macro 'BALL_CREATE'
  318 |   BALL_CREATE(MMFF94StretchBendParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:3: note: in expansion of macro 'BALL_CREATE'
  374 |   BALL_CREATE(MMFF94TorsionParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/molecularStructure.h:57,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/dockingController.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:383:34: note: because 'BALL::MMFF94TorsionParameters' has user-provided 'const BALL::MMFF94TorsionParameters& BALL::MMFF94TorsionParameters::operator=(const BALL::MMFF94TorsionParameters&)'
  383 |   const MMFF94TorsionParameters& operator = (const MMFF94TorsionParameters& param)
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:366:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  366 |  class BALL_EXPORT MMFF94TorsionParameters
      |                    ^~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/embeddable.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/modularWidget.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/dockingController.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/dockingController.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:3: note: in expansion of macro 'BALL_CREATE'
  374 |   BALL_CREATE(MMFF94TorsionParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:3: note: in expansion of macro 'BALL_CREATE'
  422 |   BALL_CREATE(MMFF94PlaneParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/molecularStructure.h:57,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/dockingController.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:431:32: note: because 'BALL::MMFF94PlaneParameters' has user-provided 'const BALL::MMFF94PlaneParameters& BALL::MMFF94PlaneParameters::operator=(const BALL::MMFF94PlaneParameters&)'
  431 |   const MMFF94PlaneParameters& operator = (const MMFF94PlaneParameters& param)
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:414:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  414 |  class BALL_EXPORT MMFF94PlaneParameters
      |                    ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/embeddable.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/modularWidget.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/dockingController.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/dockingController.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:3: note: in expansion of macro 'BALL_CREATE'
  422 |   BALL_CREATE(MMFF94PlaneParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:3: note: in expansion of macro 'BALL_CREATE'
  473 |   BALL_CREATE(MMFF94VDWParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/molecularStructure.h:57,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/dockingController.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:482:30: note: because 'BALL::MMFF94VDWParameters' has user-provided 'const BALL::MMFF94VDWParameters& BALL::MMFF94VDWParameters::operator=(const BALL::MMFF94VDWParameters&)'
  482 |   const MMFF94VDWParameters& operator = (const MMFF94VDWParameters& param)
      |                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:458:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  458 |  class BALL_EXPORT MMFF94VDWParameters
      |                    ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/embeddable.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/modularWidget.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/dockingController.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/dockingController.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:3: note: in expansion of macro 'BALL_CREATE'
  473 |   BALL_CREATE(MMFF94VDWParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94ESParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:3: note: in expansion of macro 'BALL_CREATE'
  530 |   BALL_CREATE(MMFF94ESParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/molecularStructure.h:57,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/dockingController.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:539:29: note: because 'BALL::MMFF94ESParameters' has user-provided 'const BALL::MMFF94ESParameters& BALL::MMFF94ESParameters::operator=(const BALL::MMFF94ESParameters&)'
  539 |   const MMFF94ESParameters& operator = (const MMFF94ESParameters& param)
      |                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:525:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  525 |  class BALL_EXPORT MMFF94ESParameters
      |                    ^~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/embeddable.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/modularWidget.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/dockingController.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/dockingController.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94ESParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:3: note: in expansion of macro 'BALL_CREATE'
  530 |   BALL_CREATE(MMFF94ESParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/dockingController.C:13:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/message.h: In member function 'void BALL::VIEW::SceneMessage::setStage(BALL::VIEW::Stage)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/message.h:409:15: warning: implicitly-declared 'BALL::VIEW::Stage& BALL::VIEW::Stage::operator=(const BALL::VIEW::Stage&)' is deprecated [-Wdeprecated-copy]
  409 |    { stage_ = stage;}
      |               ^~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/message.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/dockingController.C:13:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/stage.h:301:4: note: because 'BALL::VIEW::Stage' has user-provided 'BALL::VIEW::Stage::Stage(const BALL::VIEW::Stage&)'
  301 |    Stage(const Stage& stage);
      |    ^~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/dockingController.C: In member function 'virtual void BALL::VIEW::DockingController::initializeWidget(BALL::VIEW::MainControl&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/dockingController.C:146:57: warning: unused parameter 'main_control' [-Wunused-parameter]
  146 |   void DockingController::initializeWidget(MainControl& main_control)
      |                                            ~~~~~~~~~~~~~^~~~~~~~~~~~
[ 90%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/WIDGETS/dockWidget.C.o
/usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/WIDGETS/dockWidget.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/dockWidget.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:49,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/dockWidget.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/representation.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/representationManager.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/dockWidget.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:49,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/dockWidget.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/representation.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/representationManager.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/dockWidget.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:49,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/dockWidget.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/representation.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/representationManager.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/dockWidget.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/dockWidget.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/message.h: In member function 'void BALL::VIEW::SceneMessage::setStage(BALL::VIEW::Stage)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/message.h:409:15: warning: implicitly-declared 'BALL::VIEW::Stage& BALL::VIEW::Stage::operator=(const BALL::VIEW::Stage&)' is deprecated [-Wdeprecated-copy]
  409 |    { stage_ = stage;}
      |               ^~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/message.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/dockWidget.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/stage.h:301:4: note: because 'BALL::VIEW::Stage' has user-provided 'BALL::VIEW::Stage::Stage(const BALL::VIEW::Stage&)'
  301 |    Stage(const Stage& stage);
      |    ^~~~~
[ 90%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/WIDGETS/fileObserver.C.o
/usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/WIDGETS/fileObserver.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/fileObserver.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:49,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/fileObserver.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/common.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DIALOGS/molecularFileDialog.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/fileObserver.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:49,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/fileObserver.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/common.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DIALOGS/molecularFileDialog.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/fileObserver.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:49,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/fileObserver.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/common.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DIALOGS/molecularFileDialog.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/fileObserver.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 90%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/WIDGETS/genericControl.C.o
/usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/WIDGETS/genericControl.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/genericControl.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:49,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/genericControl.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/representation.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/representationManager.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/genericControl.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:49,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/genericControl.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/representation.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/representationManager.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/genericControl.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:49,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/genericControl.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/representation.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/representationManager.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/genericControl.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/genericControl.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/message.h: In member function 'void BALL::VIEW::SceneMessage::setStage(BALL::VIEW::Stage)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/message.h:409:15: warning: implicitly-declared 'BALL::VIEW::Stage& BALL::VIEW::Stage::operator=(const BALL::VIEW::Stage&)' is deprecated [-Wdeprecated-copy]
  409 |    { stage_ = stage;}
      |               ^~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/message.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/genericControl.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/stage.h:301:4: note: because 'BALL::VIEW::Stage' has user-provided 'BALL::VIEW::Stage::Stage(const BALL::VIEW::Stage&)'
  301 |    Stage(const Stage& stage);
      |    ^~~~~
[ 90%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/WIDGETS/geometricControl.C.o
/usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/WIDGETS/geometricControl.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/geometricControl.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/geometricControl.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor 'BALL::VIEW::FrameBufferFormat::FrameBufferFormat()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:53:38: warning: implicitly-declared 'constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)' is deprecated [-Wdeprecated-copy]
   53 |       pixelFormat(PixelFormat::RGB_32)
      |                                      ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/geometricControl.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because 'BALL::VIEW::PixelFormat' has user-provided 'BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)'
  162 |    PixelFormat &operator=(const PixelFormat &f)
      |                 ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/geometricControl.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor 'BALL::VIEW::FrameBufferFormat::FrameBufferFormat(BALL::Size, BALL::Size, const BALL::VIEW::PixelFormat&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:60:30: warning: implicitly-declared 'constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)' is deprecated [-Wdeprecated-copy]
   60 |       pixelFormat(pixelFormat)
      |                              ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/geometricControl.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because 'BALL::VIEW::PixelFormat' has user-provided 'BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)'
  162 |    PixelFormat &operator=(const PixelFormat &f)
      |                 ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/geometricControl.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor 'BALL::VIEW::FrameBufferFormat::FrameBufferFormat(BALL::Size, BALL::Size, BALL::Size, const BALL::VIEW::PixelFormat&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:69:30: warning: implicitly-declared 'constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)' is deprecated [-Wdeprecated-copy]
   69 |       pixelFormat(pixelFormat)
      |                              ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/geometricControl.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because 'BALL::VIEW::PixelFormat' has user-provided 'BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)'
  162 |    PixelFormat &operator=(const PixelFormat &f)
      |                 ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/geometricControl.C:12:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/message.h: In member function 'void BALL::VIEW::SceneMessage::setStage(BALL::VIEW::Stage)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/message.h:409:15: warning: implicitly-declared 'BALL::VIEW::Stage& BALL::VIEW::Stage::operator=(const BALL::VIEW::Stage&)' is deprecated [-Wdeprecated-copy]
  409 |    { stage_ = stage;}
      |               ^~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/RENDERERS/renderer.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/RENDERERS/glRenderer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/geometricControl.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/stage.h:301:4: note: because 'BALL::VIEW::Stage' has user-provided 'BALL::VIEW::Stage::Stage(const BALL::VIEW::Stage&)'
  301 |    Stage(const Stage& stage);
      |    ^~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:49,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/geometricControl.C:14:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/common.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/geometricControl.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/geometricControl.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:49,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/geometricControl.C:14:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/common.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/geometricControl.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/geometricControl.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:49,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/geometricControl.C:14:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/common.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/geometricControl.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/geometricControl.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 90%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/WIDGETS/gridColorWidget.C.o
/usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/WIDGETS/gridColorWidget.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/gridColorWidget.C
[ 90%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/WIDGETS/helpViewer.C.o
/usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/WIDGETS/helpViewer.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/helpViewer.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/helpViewer.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/message.h: In member function 'void BALL::VIEW::SceneMessage::setStage(BALL::VIEW::Stage)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/message.h:409:15: warning: implicitly-declared 'BALL::VIEW::Stage& BALL::VIEW::Stage::operator=(const BALL::VIEW::Stage&)' is deprecated [-Wdeprecated-copy]
  409 |    { stage_ = stage;}
      |               ^~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/message.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/helpViewer.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/stage.h:301:4: note: because 'BALL::VIEW::Stage' has user-provided 'BALL::VIEW::Stage::Stage(const BALL::VIEW::Stage&)'
  301 |    Stage(const Stage& stage);
      |    ^~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:49,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/helpViewer.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/stage.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/message.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/helpViewer.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:49,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/helpViewer.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/stage.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/message.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/helpViewer.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:49,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/helpViewer.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/stage.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/message.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/helpViewer.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 90%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/WIDGETS/logView.C.o
/usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/WIDGETS/logView.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/logView.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:49,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/logView.C:12:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/representation.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/representationManager.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/logView.C:12:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:49,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/logView.C:12:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/representation.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/representationManager.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/logView.C:12:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:49,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/logView.C:12:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/representation.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/representationManager.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/logView.C:12:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/logView.C:13:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/message.h: In member function 'void BALL::VIEW::SceneMessage::setStage(BALL::VIEW::Stage)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/message.h:409:15: warning: implicitly-declared 'BALL::VIEW::Stage& BALL::VIEW::Stage::operator=(const BALL::VIEW::Stage&)' is deprecated [-Wdeprecated-copy]
  409 |    { stage_ = stage;}
      |               ^~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/message.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/logView.C:13:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/stage.h:301:4: note: because 'BALL::VIEW::Stage' has user-provided 'BALL::VIEW::Stage::Stage(const BALL::VIEW::Stage&)'
  301 |    Stage(const Stage& stage);
      |    ^~~~~
[ 90%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/WIDGETS/molecularControl.C.o
/usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/WIDGETS/molecularControl.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/molecularControl.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/molecularControl.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor 'BALL::VIEW::FrameBufferFormat::FrameBufferFormat()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:53:38: warning: implicitly-declared 'constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)' is deprecated [-Wdeprecated-copy]
   53 |       pixelFormat(PixelFormat::RGB_32)
      |                                      ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/molecularControl.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because 'BALL::VIEW::PixelFormat' has user-provided 'BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)'
  162 |    PixelFormat &operator=(const PixelFormat &f)
      |                 ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/molecularControl.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor 'BALL::VIEW::FrameBufferFormat::FrameBufferFormat(BALL::Size, BALL::Size, const BALL::VIEW::PixelFormat&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:60:30: warning: implicitly-declared 'constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)' is deprecated [-Wdeprecated-copy]
   60 |       pixelFormat(pixelFormat)
      |                              ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/molecularControl.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because 'BALL::VIEW::PixelFormat' has user-provided 'BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)'
  162 |    PixelFormat &operator=(const PixelFormat &f)
      |                 ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/molecularControl.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor 'BALL::VIEW::FrameBufferFormat::FrameBufferFormat(BALL::Size, BALL::Size, BALL::Size, const BALL::VIEW::PixelFormat&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:69:30: warning: implicitly-declared 'constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)' is deprecated [-Wdeprecated-copy]
   69 |       pixelFormat(pixelFormat)
      |                              ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/molecularControl.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because 'BALL::VIEW::PixelFormat' has user-provided 'BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)'
  162 |    PixelFormat &operator=(const PixelFormat &f)
      |                 ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:49,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/molecularControl.C:12:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/molecularInformation.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/molecularControl.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/molecularControl.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:49,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/molecularControl.C:12:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/molecularInformation.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/molecularControl.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/molecularControl.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:49,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/molecularControl.C:12:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/molecularInformation.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/molecularControl.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/molecularControl.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/molecularControl.C:13:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/message.h: In member function 'void BALL::VIEW::SceneMessage::setStage(BALL::VIEW::Stage)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/message.h:409:15: warning: implicitly-declared 'BALL::VIEW::Stage& BALL::VIEW::Stage::operator=(const BALL::VIEW::Stage&)' is deprecated [-Wdeprecated-copy]
  409 |    { stage_ = stage;}
      |               ^~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/RENDERERS/renderer.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/RENDERERS/glRenderer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/molecularControl.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/stage.h:301:4: note: because 'BALL::VIEW::Stage' has user-provided 'BALL::VIEW::Stage::Stage(const BALL::VIEW::Stage&)'
  301 |    Stage(const Stage& stage);
      |    ^~~~~
[ 90%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/WIDGETS/molecularStructure.C.o
/usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/WIDGETS/molecularStructure.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/molecularStructure.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/assignBondOrderProcessor.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DIALOGS/assignBondOrderConfigurationDialog.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/molecularStructure.h:37,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/molecularStructure.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/molecularStructure.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/molecularStructure.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/assignBondOrderProcessor.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DIALOGS/assignBondOrderConfigurationDialog.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/molecularStructure.h:37,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/molecularStructure.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/molecularStructure.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/molecularStructure.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/assignBondOrderProcessor.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DIALOGS/assignBondOrderConfigurationDialog.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/molecularStructure.h:37,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/molecularStructure.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/molecularStructure.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/molecularStructure.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/embeddable.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/modularWidget.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/molecularStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/molecularStructure.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94ParametersBase::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:43:3: note: in expansion of macro 'BALL_CREATE'
   43 |   BALL_CREATE(MMFF94ParametersBase)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/molecularStructure.h:57,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/molecularStructure.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/embeddable.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/modularWidget.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/molecularStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/molecularStructure.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:3: note: in expansion of macro 'BALL_CREATE'
  217 |   BALL_CREATE(MMFF94StretchParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/molecularStructure.h:57,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/molecularStructure.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:226:34: note: because 'BALL::MMFF94StretchParameters' has user-provided 'const BALL::MMFF94StretchParameters& BALL::MMFF94StretchParameters::operator=(const BALL::MMFF94StretchParameters&)'
  226 |   const MMFF94StretchParameters& operator = (const MMFF94StretchParameters& param)
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:185:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  185 |  class BALL_EXPORT MMFF94StretchParameters:
      |                    ^~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/embeddable.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/modularWidget.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/molecularStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/molecularStructure.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:3: note: in expansion of macro 'BALL_CREATE'
  217 |   BALL_CREATE(MMFF94StretchParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94BendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:3: note: in expansion of macro 'BALL_CREATE'
  271 |   BALL_CREATE(MMFF94BendParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/molecularStructure.h:57,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/molecularStructure.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:280:31: note: because 'BALL::MMFF94BendParameters' has user-provided 'const BALL::MMFF94BendParameters& BALL::MMFF94BendParameters::operator=(const BALL::MMFF94BendParameters&)'
  280 |   const MMFF94BendParameters& operator = (const MMFF94BendParameters& param)
      |                               ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:263:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  263 |  class BALL_EXPORT MMFF94BendParameters
      |                    ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/embeddable.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/modularWidget.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/molecularStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/molecularStructure.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94BendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:3: note: in expansion of macro 'BALL_CREATE'
  271 |   BALL_CREATE(MMFF94BendParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:3: note: in expansion of macro 'BALL_CREATE'
  318 |   BALL_CREATE(MMFF94StretchBendParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/molecularStructure.h:57,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/molecularStructure.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:327:38: note: because 'BALL::MMFF94StretchBendParameters' has user-provided 'const BALL::MMFF94StretchBendParameters& BALL::MMFF94StretchBendParameters::operator=(const BALL::MMFF94StretchBendParameters&)'
  327 |   const MMFF94StretchBendParameters& operator = (const MMFF94StretchBendParameters& param)
      |                                      ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:310:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  310 |  class BALL_EXPORT MMFF94StretchBendParameters
      |                    ^~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/embeddable.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/modularWidget.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/molecularStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/molecularStructure.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:3: note: in expansion of macro 'BALL_CREATE'
  318 |   BALL_CREATE(MMFF94StretchBendParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:3: note: in expansion of macro 'BALL_CREATE'
  374 |   BALL_CREATE(MMFF94TorsionParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/molecularStructure.h:57,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/molecularStructure.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:383:34: note: because 'BALL::MMFF94TorsionParameters' has user-provided 'const BALL::MMFF94TorsionParameters& BALL::MMFF94TorsionParameters::operator=(const BALL::MMFF94TorsionParameters&)'
  383 |   const MMFF94TorsionParameters& operator = (const MMFF94TorsionParameters& param)
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:366:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  366 |  class BALL_EXPORT MMFF94TorsionParameters
      |                    ^~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/embeddable.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/modularWidget.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/molecularStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/molecularStructure.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:3: note: in expansion of macro 'BALL_CREATE'
  374 |   BALL_CREATE(MMFF94TorsionParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:3: note: in expansion of macro 'BALL_CREATE'
  422 |   BALL_CREATE(MMFF94PlaneParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/molecularStructure.h:57,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/molecularStructure.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:431:32: note: because 'BALL::MMFF94PlaneParameters' has user-provided 'const BALL::MMFF94PlaneParameters& BALL::MMFF94PlaneParameters::operator=(const BALL::MMFF94PlaneParameters&)'
  431 |   const MMFF94PlaneParameters& operator = (const MMFF94PlaneParameters& param)
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:414:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  414 |  class BALL_EXPORT MMFF94PlaneParameters
      |                    ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/embeddable.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/modularWidget.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/molecularStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/molecularStructure.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:3: note: in expansion of macro 'BALL_CREATE'
  422 |   BALL_CREATE(MMFF94PlaneParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:3: note: in expansion of macro 'BALL_CREATE'
  473 |   BALL_CREATE(MMFF94VDWParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/molecularStructure.h:57,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/molecularStructure.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:482:30: note: because 'BALL::MMFF94VDWParameters' has user-provided 'const BALL::MMFF94VDWParameters& BALL::MMFF94VDWParameters::operator=(const BALL::MMFF94VDWParameters&)'
  482 |   const MMFF94VDWParameters& operator = (const MMFF94VDWParameters& param)
      |                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:458:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  458 |  class BALL_EXPORT MMFF94VDWParameters
      |                    ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/embeddable.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/modularWidget.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/molecularStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/molecularStructure.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:3: note: in expansion of macro 'BALL_CREATE'
  473 |   BALL_CREATE(MMFF94VDWParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94ESParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:3: note: in expansion of macro 'BALL_CREATE'
  530 |   BALL_CREATE(MMFF94ESParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/molecularStructure.h:57,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/molecularStructure.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:539:29: note: because 'BALL::MMFF94ESParameters' has user-provided 'const BALL::MMFF94ESParameters& BALL::MMFF94ESParameters::operator=(const BALL::MMFF94ESParameters&)'
  539 |   const MMFF94ESParameters& operator = (const MMFF94ESParameters& param)
      |                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:525:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  525 |  class BALL_EXPORT MMFF94ESParameters
      |                    ^~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/embeddable.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/modularWidget.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/molecularStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/molecularStructure.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94ESParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:3: note: in expansion of macro 'BALL_CREATE'
  530 |   BALL_CREATE(MMFF94ESParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/molecularStructure.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor 'BALL::VIEW::FrameBufferFormat::FrameBufferFormat()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:53:38: warning: implicitly-declared 'constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)' is deprecated [-Wdeprecated-copy]
   53 |       pixelFormat(PixelFormat::RGB_32)
      |                                      ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/molecularStructure.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because 'BALL::VIEW::PixelFormat' has user-provided 'BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)'
  162 |    PixelFormat &operator=(const PixelFormat &f)
      |                 ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/molecularStructure.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor 'BALL::VIEW::FrameBufferFormat::FrameBufferFormat(BALL::Size, BALL::Size, const BALL::VIEW::PixelFormat&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:60:30: warning: implicitly-declared 'constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)' is deprecated [-Wdeprecated-copy]
   60 |       pixelFormat(pixelFormat)
      |                              ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/molecularStructure.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because 'BALL::VIEW::PixelFormat' has user-provided 'BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)'
  162 |    PixelFormat &operator=(const PixelFormat &f)
      |                 ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/molecularStructure.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor 'BALL::VIEW::FrameBufferFormat::FrameBufferFormat(BALL::Size, BALL::Size, BALL::Size, const BALL::VIEW::PixelFormat&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:69:30: warning: implicitly-declared 'constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)' is deprecated [-Wdeprecated-copy]
   69 |       pixelFormat(pixelFormat)
      |                              ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/molecularStructure.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because 'BALL::VIEW::PixelFormat' has user-provided 'BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)'
  162 |    PixelFormat &operator=(const PixelFormat &f)
      |                 ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/molecularStructure.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/message.h: In member function 'void BALL::VIEW::SceneMessage::setStage(BALL::VIEW::Stage)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/message.h:409:15: warning: implicitly-declared 'BALL::VIEW::Stage& BALL::VIEW::Stage::operator=(const BALL::VIEW::Stage&)' is deprecated [-Wdeprecated-copy]
  409 |    { stage_ = stage;}
      |               ^~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/RENDERERS/renderer.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/RENDERERS/glRenderer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/molecularStructure.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/stage.h:301:4: note: because 'BALL::VIEW::Stage' has user-provided 'BALL::VIEW::Stage::Stage(const BALL::VIEW::Stage&)'
  301 |    Stage(const Stage& stage);
      |    ^~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/molecularStructure.C: In member function 'virtual void BALL::VIEW::MolecularStructure::calculateRMSD()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/molecularStructure.C:979:24: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  979 |    ait = a2->beginAtom();
      |                        ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/molecularStructure.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/molecularStructure.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/molecularStructure.C: In member function 'virtual void BALL::VIEW::MolecularStructure::calculateRMSD()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/molecularStructure.C:979:24: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' first required here
  979 |    ait = a2->beginAtom();
      |                        ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/molecularStructure.C:27:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/molecularStructure.C: In member function 'void BALL::VIEW::MolecularStructure::calculateHBonds()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:108:49: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  108 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/molecularStructure.C:1206:4: note: in expansion of macro 'BALL_FOREACH_BOND'
 1206 |    BALL_FOREACH_BOND(*system, ait, bit)
      |    ^~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/molecularStructure.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/molecularStructure.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/molecularStructure.C:27:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:110:51: warning: implicitly-declared 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  110 |   for (bond_iterator = (*atom_iterator).beginBond(); \
      |                                                   ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/molecularStructure.C:1206:4: note: in expansion of macro 'BALL_FOREACH_BOND'
 1206 |    BALL_FOREACH_BOND(*system, ait, bit)
      |    ^~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/assignBondOrderProcessor.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DIALOGS/assignBondOrderConfigurationDialog.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/molecularStructure.h:37,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/molecularStructure.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:437:15: note: because 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::RandomAccessIterator<Container, DataType, Position, Traits>::RandomAccessIterator(const BALL::RandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
  437 |   BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:413:8: warning: implicitly-declared 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  413 |  class RandomAccessIterator
      |        ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:47:15: note: because 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   47 |   BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:24:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   24 |  class ConstRandomAccessIterator
      |        ^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/molecularStructure.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/molecularStructure.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/assignBondOrderProcessor.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DIALOGS/assignBondOrderConfigurationDialog.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/molecularStructure.h:37,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/molecularStructure.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:413:8: note: synthesized method 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' first required here
  413 |  class RandomAccessIterator
      |        ^~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/molecularStructure.C:27:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/molecularStructure.C: In member function 'void BALL::VIEW::MolecularStructure::calculateHBonds()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:110:51: note: synthesized method 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' first required here
  110 |   for (bond_iterator = (*atom_iterator).beginBond(); \
      |                                                   ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/molecularStructure.C:1206:4: note: in expansion of macro 'BALL_FOREACH_BOND'
 1206 |    BALL_FOREACH_BOND(*system, ait, bit)
      |    ^~~~~~~~~~~~~~~~~
[ 90%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/WIDGETS/propertyEditor.C.o
/usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/WIDGETS/propertyEditor.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/propertyEditor.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/secondaryStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBdefs.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBInfo.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/propertyEditor.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/propertyEditor.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBRecords.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBInfo.h:12,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/propertyEditor.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/propertyEditor.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/secondaryStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBdefs.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBInfo.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/propertyEditor.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/propertyEditor.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBRecords.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBInfo.h:12,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/propertyEditor.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/propertyEditor.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/secondaryStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBdefs.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBInfo.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/propertyEditor.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/propertyEditor.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBRecords.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBInfo.h:12,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/propertyEditor.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/propertyEditor.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 90%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/WIDGETS/scene.C.o
/usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/WIDGETS/scene.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/scene.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/scene.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor 'BALL::VIEW::FrameBufferFormat::FrameBufferFormat()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:53:38: warning: implicitly-declared 'constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)' is deprecated [-Wdeprecated-copy]
   53 |       pixelFormat(PixelFormat::RGB_32)
      |                                      ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/scene.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because 'BALL::VIEW::PixelFormat' has user-provided 'BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)'
  162 |    PixelFormat &operator=(const PixelFormat &f)
      |                 ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/scene.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor 'BALL::VIEW::FrameBufferFormat::FrameBufferFormat(BALL::Size, BALL::Size, const BALL::VIEW::PixelFormat&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:60:30: warning: implicitly-declared 'constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)' is deprecated [-Wdeprecated-copy]
   60 |       pixelFormat(pixelFormat)
      |                              ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/scene.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because 'BALL::VIEW::PixelFormat' has user-provided 'BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)'
  162 |    PixelFormat &operator=(const PixelFormat &f)
      |                 ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/scene.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor 'BALL::VIEW::FrameBufferFormat::FrameBufferFormat(BALL::Size, BALL::Size, BALL::Size, const BALL::VIEW::PixelFormat&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:69:30: warning: implicitly-declared 'constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)' is deprecated [-Wdeprecated-copy]
   69 |       pixelFormat(pixelFormat)
      |                              ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/scene.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because 'BALL::VIEW::PixelFormat' has user-provided 'BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)'
  162 |    PixelFormat &operator=(const PixelFormat &f)
      |                 ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/assignBondOrderProcessor.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DIALOGS/assignBondOrderConfigurationDialog.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/molecularStructure.h:37,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/scene.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/representation.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/RENDERERS/renderer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/RENDERERS/glRenderer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/scene.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/assignBondOrderProcessor.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DIALOGS/assignBondOrderConfigurationDialog.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/molecularStructure.h:37,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/scene.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/representation.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/RENDERERS/renderer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/RENDERERS/glRenderer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/scene.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/assignBondOrderProcessor.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DIALOGS/assignBondOrderConfigurationDialog.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/molecularStructure.h:37,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/scene.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/representation.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/RENDERERS/renderer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/RENDERERS/glRenderer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/scene.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/embeddable.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/modularWidget.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/scene.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94ParametersBase::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:43:3: note: in expansion of macro 'BALL_CREATE'
   43 |   BALL_CREATE(MMFF94ParametersBase)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/molecularStructure.h:57,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/scene.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/embeddable.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/modularWidget.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/scene.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:3: note: in expansion of macro 'BALL_CREATE'
  217 |   BALL_CREATE(MMFF94StretchParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/molecularStructure.h:57,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/scene.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:226:34: note: because 'BALL::MMFF94StretchParameters' has user-provided 'const BALL::MMFF94StretchParameters& BALL::MMFF94StretchParameters::operator=(const BALL::MMFF94StretchParameters&)'
  226 |   const MMFF94StretchParameters& operator = (const MMFF94StretchParameters& param)
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:185:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  185 |  class BALL_EXPORT MMFF94StretchParameters:
      |                    ^~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/embeddable.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/modularWidget.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/scene.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:3: note: in expansion of macro 'BALL_CREATE'
  217 |   BALL_CREATE(MMFF94StretchParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94BendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:3: note: in expansion of macro 'BALL_CREATE'
  271 |   BALL_CREATE(MMFF94BendParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/molecularStructure.h:57,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/scene.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:280:31: note: because 'BALL::MMFF94BendParameters' has user-provided 'const BALL::MMFF94BendParameters& BALL::MMFF94BendParameters::operator=(const BALL::MMFF94BendParameters&)'
  280 |   const MMFF94BendParameters& operator = (const MMFF94BendParameters& param)
      |                               ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:263:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  263 |  class BALL_EXPORT MMFF94BendParameters
      |                    ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/embeddable.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/modularWidget.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/scene.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94BendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:3: note: in expansion of macro 'BALL_CREATE'
  271 |   BALL_CREATE(MMFF94BendParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:3: note: in expansion of macro 'BALL_CREATE'
  318 |   BALL_CREATE(MMFF94StretchBendParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/molecularStructure.h:57,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/scene.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:327:38: note: because 'BALL::MMFF94StretchBendParameters' has user-provided 'const BALL::MMFF94StretchBendParameters& BALL::MMFF94StretchBendParameters::operator=(const BALL::MMFF94StretchBendParameters&)'
  327 |   const MMFF94StretchBendParameters& operator = (const MMFF94StretchBendParameters& param)
      |                                      ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:310:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  310 |  class BALL_EXPORT MMFF94StretchBendParameters
      |                    ^~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/embeddable.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/modularWidget.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/scene.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:3: note: in expansion of macro 'BALL_CREATE'
  318 |   BALL_CREATE(MMFF94StretchBendParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:3: note: in expansion of macro 'BALL_CREATE'
  374 |   BALL_CREATE(MMFF94TorsionParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/molecularStructure.h:57,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/scene.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:383:34: note: because 'BALL::MMFF94TorsionParameters' has user-provided 'const BALL::MMFF94TorsionParameters& BALL::MMFF94TorsionParameters::operator=(const BALL::MMFF94TorsionParameters&)'
  383 |   const MMFF94TorsionParameters& operator = (const MMFF94TorsionParameters& param)
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:366:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  366 |  class BALL_EXPORT MMFF94TorsionParameters
      |                    ^~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/embeddable.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/modularWidget.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/scene.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:3: note: in expansion of macro 'BALL_CREATE'
  374 |   BALL_CREATE(MMFF94TorsionParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:3: note: in expansion of macro 'BALL_CREATE'
  422 |   BALL_CREATE(MMFF94PlaneParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/molecularStructure.h:57,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/scene.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:431:32: note: because 'BALL::MMFF94PlaneParameters' has user-provided 'const BALL::MMFF94PlaneParameters& BALL::MMFF94PlaneParameters::operator=(const BALL::MMFF94PlaneParameters&)'
  431 |   const MMFF94PlaneParameters& operator = (const MMFF94PlaneParameters& param)
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:414:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  414 |  class BALL_EXPORT MMFF94PlaneParameters
      |                    ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/embeddable.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/modularWidget.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/scene.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:3: note: in expansion of macro 'BALL_CREATE'
  422 |   BALL_CREATE(MMFF94PlaneParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:3: note: in expansion of macro 'BALL_CREATE'
  473 |   BALL_CREATE(MMFF94VDWParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/molecularStructure.h:57,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/scene.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:482:30: note: because 'BALL::MMFF94VDWParameters' has user-provided 'const BALL::MMFF94VDWParameters& BALL::MMFF94VDWParameters::operator=(const BALL::MMFF94VDWParameters&)'
  482 |   const MMFF94VDWParameters& operator = (const MMFF94VDWParameters& param)
      |                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:458:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  458 |  class BALL_EXPORT MMFF94VDWParameters
      |                    ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/embeddable.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/modularWidget.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/scene.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:3: note: in expansion of macro 'BALL_CREATE'
  473 |   BALL_CREATE(MMFF94VDWParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94ESParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:3: note: in expansion of macro 'BALL_CREATE'
  530 |   BALL_CREATE(MMFF94ESParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/molecularStructure.h:57,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/scene.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:539:29: note: because 'BALL::MMFF94ESParameters' has user-provided 'const BALL::MMFF94ESParameters& BALL::MMFF94ESParameters::operator=(const BALL::MMFF94ESParameters&)'
  539 |   const MMFF94ESParameters& operator = (const MMFF94ESParameters& param)
      |                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:525:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  525 |  class BALL_EXPORT MMFF94ESParameters
      |                    ^~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/embeddable.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/modularWidget.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/scene.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94ESParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:3: note: in expansion of macro 'BALL_CREATE'
  530 |   BALL_CREATE(MMFF94ESParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/scene.C:13:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/message.h: In member function 'void BALL::VIEW::SceneMessage::setStage(BALL::VIEW::Stage)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/message.h:409:15: warning: implicitly-declared 'BALL::VIEW::Stage& BALL::VIEW::Stage::operator=(const BALL::VIEW::Stage&)' is deprecated [-Wdeprecated-copy]
  409 |    { stage_ = stage;}
      |               ^~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/RENDERERS/renderer.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/RENDERERS/glRenderer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/scene.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/stage.h:301:4: note: because 'BALL::VIEW::Stage' has user-provided 'BALL::VIEW::Stage::Stage(const BALL::VIEW::Stage&)'
  301 |    Stage(const Stage& stage);
      |    ^~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/scene.C: In member function 'void BALL::VIEW::Scene::switchRenderer(BALL::VIEW::RenderSetup::RendererType)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/scene.C:2429:26: warning: comparison of integer expressions of different signedness: 'BALL::Index' {aka 'int'} and 'BALL::Position' {aka 'unsigned int'} [-Wsign-compare]
 2429 |    if (stereo_left_eye_  > main_renderer_) stereo_left_eye_--;
      |        ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/scene.C:2430:26: warning: comparison of integer expressions of different signedness: 'BALL::Index' {aka 'int'} and 'BALL::Position' {aka 'unsigned int'} [-Wsign-compare]
 2430 |    if (stereo_right_eye_ > main_renderer_) stereo_right_eye_--;
      |        ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
[ 90%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/WIDGETS/shortcutTableView.C.o
/usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/WIDGETS/shortcutTableView.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/shortcutTableView.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/shortcutTableView.C:15:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor 'BALL::VIEW::FrameBufferFormat::FrameBufferFormat()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:53:38: warning: implicitly-declared 'constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)' is deprecated [-Wdeprecated-copy]
   53 |       pixelFormat(PixelFormat::RGB_32)
      |                                      ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/shortcutTableView.C:15:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because 'BALL::VIEW::PixelFormat' has user-provided 'BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)'
  162 |    PixelFormat &operator=(const PixelFormat &f)
      |                 ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/shortcutTableView.C:15:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor 'BALL::VIEW::FrameBufferFormat::FrameBufferFormat(BALL::Size, BALL::Size, const BALL::VIEW::PixelFormat&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:60:30: warning: implicitly-declared 'constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)' is deprecated [-Wdeprecated-copy]
   60 |       pixelFormat(pixelFormat)
      |                              ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/shortcutTableView.C:15:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because 'BALL::VIEW::PixelFormat' has user-provided 'BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)'
  162 |    PixelFormat &operator=(const PixelFormat &f)
      |                 ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/shortcutTableView.C:15:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor 'BALL::VIEW::FrameBufferFormat::FrameBufferFormat(BALL::Size, BALL::Size, BALL::Size, const BALL::VIEW::PixelFormat&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:69:30: warning: implicitly-declared 'constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)' is deprecated [-Wdeprecated-copy]
   69 |       pixelFormat(pixelFormat)
      |                              ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/shortcutTableView.C:15:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because 'BALL::VIEW::PixelFormat' has user-provided 'BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)'
  162 |    PixelFormat &operator=(const PixelFormat &f)
      |                 ^~~~~~~~
[ 90%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/WIDGETS/SDWidget.C.o
/usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/WIDGETS/SDWidget.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/SDWidget.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/SDWidget.h:12,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/SDWidget.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/SDWidget.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/SDWidget.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/SDWidget.h:12,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/SDWidget.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/SDWidget.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/SDWidget.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/SDWidget.h:12,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/SDWidget.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/SDWidget.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/SDWidget.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 90%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/WIDGETS/testFramework.C.o
/usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/WIDGETS/testFramework.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/testFramework.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:49,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/testFramework.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/common.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DIALOGS/molecularFileDialog.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/testFramework.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:49,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/testFramework.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/common.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DIALOGS/molecularFileDialog.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/testFramework.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:49,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/testFramework.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/common.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DIALOGS/molecularFileDialog.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/testFramework.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/testFramework.C: In member function 'virtual void BALL::VIEW::TestFramework::timeOut()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/testFramework.C:542:10: warning: variable 'org_p' set but not used [-Wunused-but-set-variable]
  542 |   QPoint org_p = local;
      |          ^~~~~
[ 93%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/WIDGETS/textEditorWidget.C.o
/usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/WIDGETS/textEditorWidget.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/textEditorWidget.C
[ 93%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/WIDGETS/HTMLPage.C.o
/usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/WIDGETS/HTMLPage.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/HTMLPage.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:49,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/HTMLPage.C:3:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/representation.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/representationManager.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/HTMLPage.C:3:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:49,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/HTMLPage.C:3:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/representation.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/representationManager.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/HTMLPage.C:3:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:49,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/HTMLPage.C:3:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/representation.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/representationManager.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/HTMLPage.C:3:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 93%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/WIDGETS/HTMLView.C.o
/usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/WIDGETS/HTMLView.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/HTMLView.C
[ 93%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/INPUT/deviceEvent.C.o
/usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/INPUT/deviceEvent.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/INPUT/deviceEvent.C
[ 93%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/INPUT/transformationEvent6D.C.o
/usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/INPUT/transformationEvent6D.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/INPUT/transformationEvent6D.C
[ 93%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/INPUT/headTrackingEvent.C.o
/usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/INPUT/headTrackingEvent.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/INPUT/headTrackingEvent.C
[ 93%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/INPUT/motionTrackingEvent.C.o
/usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/INPUT/motionTrackingEvent.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/INPUT/motionTrackingEvent.C
[ 93%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/INPUT/notificationEvent.C.o
/usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/INPUT/notificationEvent.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/INPUT/notificationEvent.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/INPUT/notificationEvent.h:6,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/INPUT/notificationEvent.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/message.h: In member function 'void BALL::VIEW::SceneMessage::setStage(BALL::VIEW::Stage)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/message.h:409:15: warning: implicitly-declared 'BALL::VIEW::Stage& BALL::VIEW::Stage::operator=(const BALL::VIEW::Stage&)' is deprecated [-Wdeprecated-copy]
  409 |    { stage_ = stage;}
      |               ^~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/message.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/INPUT/notificationEvent.h:6,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/INPUT/notificationEvent.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/stage.h:301:4: note: because 'BALL::VIEW::Stage' has user-provided 'BALL::VIEW::Stage::Stage(const BALL::VIEW::Stage&)'
  301 |    Stage(const Stage& stage);
      |    ^~~~~
[ 93%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/INPUT/buttonEvent.C.o
/usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/INPUT/buttonEvent.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/INPUT/buttonEvent.C
[ 93%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/INPUT/inputDeviceDriver.C.o
/usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/INPUT/inputDeviceDriver.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/INPUT/inputDeviceDriver.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/INPUT/inputDeviceDriver.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor 'BALL::VIEW::FrameBufferFormat::FrameBufferFormat()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:53:38: warning: implicitly-declared 'constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)' is deprecated [-Wdeprecated-copy]
   53 |       pixelFormat(PixelFormat::RGB_32)
      |                                      ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/INPUT/inputDeviceDriver.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because 'BALL::VIEW::PixelFormat' has user-provided 'BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)'
  162 |    PixelFormat &operator=(const PixelFormat &f)
      |                 ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/INPUT/inputDeviceDriver.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor 'BALL::VIEW::FrameBufferFormat::FrameBufferFormat(BALL::Size, BALL::Size, const BALL::VIEW::PixelFormat&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:60:30: warning: implicitly-declared 'constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)' is deprecated [-Wdeprecated-copy]
   60 |       pixelFormat(pixelFormat)
      |                              ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/INPUT/inputDeviceDriver.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because 'BALL::VIEW::PixelFormat' has user-provided 'BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)'
  162 |    PixelFormat &operator=(const PixelFormat &f)
      |                 ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/INPUT/inputDeviceDriver.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor 'BALL::VIEW::FrameBufferFormat::FrameBufferFormat(BALL::Size, BALL::Size, BALL::Size, const BALL::VIEW::PixelFormat&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:69:30: warning: implicitly-declared 'constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)' is deprecated [-Wdeprecated-copy]
   69 |       pixelFormat(pixelFormat)
      |                              ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/INPUT/inputDeviceDriver.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because 'BALL::VIEW::PixelFormat' has user-provided 'BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)'
  162 |    PixelFormat &operator=(const PixelFormat &f)
      |                 ^~~~~~~~
[ 93%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/PLUGIN/modularWidgetPlugin.C.o
/usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/PLUGIN/modularWidgetPlugin.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/PLUGIN/modularWidgetPlugin.C
[ 93%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/PLUGIN/modularWidgetPluginHandler.C.o
/usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/PLUGIN/modularWidgetPluginHandler.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/PLUGIN/modularWidgetPluginHandler.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:49,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/PLUGIN/modularWidgetPluginHandler.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/representation.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/representationManager.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/PLUGIN/modularWidgetPluginHandler.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:49,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/PLUGIN/modularWidgetPluginHandler.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/representation.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/representationManager.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/PLUGIN/modularWidgetPluginHandler.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:49,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/PLUGIN/modularWidgetPluginHandler.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/representation.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/representationManager.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/PLUGIN/modularWidgetPluginHandler.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 93%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/PLUGIN/VIEWPlugin.C.o
/usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/PLUGIN/VIEWPlugin.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/PLUGIN/VIEWPlugin.C
[ 93%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/PLUGIN/inputDevPluginHandler.C.o
/usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/PLUGIN/inputDevPluginHandler.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/PLUGIN/inputDevPluginHandler.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/PLUGIN/inputDevPluginHandler.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor 'BALL::VIEW::FrameBufferFormat::FrameBufferFormat()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:53:38: warning: implicitly-declared 'constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)' is deprecated [-Wdeprecated-copy]
   53 |       pixelFormat(PixelFormat::RGB_32)
      |                                      ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/PLUGIN/inputDevPluginHandler.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because 'BALL::VIEW::PixelFormat' has user-provided 'BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)'
  162 |    PixelFormat &operator=(const PixelFormat &f)
      |                 ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/PLUGIN/inputDevPluginHandler.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor 'BALL::VIEW::FrameBufferFormat::FrameBufferFormat(BALL::Size, BALL::Size, const BALL::VIEW::PixelFormat&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:60:30: warning: implicitly-declared 'constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)' is deprecated [-Wdeprecated-copy]
   60 |       pixelFormat(pixelFormat)
      |                              ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/PLUGIN/inputDevPluginHandler.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because 'BALL::VIEW::PixelFormat' has user-provided 'BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)'
  162 |    PixelFormat &operator=(const PixelFormat &f)
      |                 ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/PLUGIN/inputDevPluginHandler.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor 'BALL::VIEW::FrameBufferFormat::FrameBufferFormat(BALL::Size, BALL::Size, BALL::Size, const BALL::VIEW::PixelFormat&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:69:30: warning: implicitly-declared 'constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)' is deprecated [-Wdeprecated-copy]
   69 |       pixelFormat(pixelFormat)
      |                              ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/PLUGIN/inputDevPluginHandler.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because 'BALL::VIEW::PixelFormat' has user-provided 'BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)'
  162 |    PixelFormat &operator=(const PixelFormat &f)
      |                 ^~~~~~~~
[ 93%] Linking CXX shared library lib/libVIEW.so
/usr/bin/cmake -E cmake_link_script CMakeFiles/VIEW.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libVIEW.so.1.5 -o lib/libVIEW.so.1.5 CMakeFiles/VIEW.dir/VIEW_autogen/mocs_compilation.cpp.o CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/assignBondOrderConfigurationDialog.C.o CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/assignBondOrderResultsDialog.C.o CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/atomOverview.C.o CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/amberConfigurationDialog.C.o CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/bondProperties.C.o CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/charmmConfigurationDialog.C.o CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/contourSurfaceDialog.C.o CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/coloringSettingsDialog.C.o CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/compositeProperties.C.o CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/clippingDialog.C.o CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/dockDialog.C.o CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/dockProgressDialog.C.o CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/dockResultDialog.C.o CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/downloadPDBFile.C.o CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/downloadElectronDensity.C.o CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/editSettings.C.o CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/editSingleShortcut.C.o CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/displayProperties.C.o CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/fieldLinesDialog.C.o CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/FDPBDialog.C.o CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/generateCrystalDialog.C.o CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/gridVisualizationDialog.C.o CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/labelDialog.C.o CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/lightSettings.C.o CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/mainControlPreferences.C.o CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/materialSettings.C.o CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/minimizationDialog.C.o CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/modelSettingsDialog.C.o CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/modifyRepresentationDialog.C.o CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/molecularDynamicsDialog.C.o CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/molecularFileDialog.C.o CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/MMFF94ConfigurationDialog.C.o CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/networkPreferences.C.o CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/openSavePreferences.C.o CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/parsedFunctionDialog.C.o CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/peptideDialog.C.o CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/pluginDialog.C.o CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/preferences.C.o CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/exportGeometryDialog.C.o CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/PTEDialog.C.o CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/pubchemDialog.C.o CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/raytraceableContourSurfaceDialog.C.o CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/setCamera.C.o CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/setClippingPlane.C.o CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/serverPreferences.C.o CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/shortcutDialog.C.o CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/snapShotVisualisation.C.o CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/stageSettings.C.o CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/stereoSettingsDialog.C.o CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/undoManagerDialog.C.o CMakeFiles/VIEW.dir/source/VIEW/DATATYPE/colorExtensions.C.o CMakeFiles/VIEW.dir/source/VIEW/DATATYPE/colorHSV.C.o CMakeFiles/VIEW.dir/source/VIEW/DATATYPE/colorRGBA.C.o CMakeFiles/VIEW.dir/source/VIEW/DATATYPE/colorMap.C.o CMakeFiles/VIEW.dir/source/VIEW/DATATYPE/colorUnit.C.o CMakeFiles/VIEW.dir/source/VIEW/DATATYPE/colorUnitHue.C.o CMakeFiles/VIEW.dir/source/VIEW/DATATYPE/vertex1.C.o 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CMakeFiles/VIEW.dir/source/VIEW/WIDGETS/geometricControl.C.o CMakeFiles/VIEW.dir/source/VIEW/WIDGETS/gridColorWidget.C.o CMakeFiles/VIEW.dir/source/VIEW/WIDGETS/helpViewer.C.o CMakeFiles/VIEW.dir/source/VIEW/WIDGETS/logView.C.o CMakeFiles/VIEW.dir/source/VIEW/WIDGETS/molecularControl.C.o CMakeFiles/VIEW.dir/source/VIEW/WIDGETS/molecularStructure.C.o CMakeFiles/VIEW.dir/source/VIEW/WIDGETS/propertyEditor.C.o CMakeFiles/VIEW.dir/source/VIEW/WIDGETS/scene.C.o CMakeFiles/VIEW.dir/source/VIEW/WIDGETS/shortcutTableView.C.o CMakeFiles/VIEW.dir/source/VIEW/WIDGETS/SDWidget.C.o CMakeFiles/VIEW.dir/source/VIEW/WIDGETS/testFramework.C.o CMakeFiles/VIEW.dir/source/VIEW/WIDGETS/textEditorWidget.C.o CMakeFiles/VIEW.dir/source/VIEW/WIDGETS/HTMLPage.C.o CMakeFiles/VIEW.dir/source/VIEW/WIDGETS/HTMLView.C.o CMakeFiles/VIEW.dir/source/VIEW/INPUT/deviceEvent.C.o CMakeFiles/VIEW.dir/source/VIEW/INPUT/transformationEvent6D.C.o CMakeFiles/VIEW.dir/source/VIEW/INPUT/headTrackingEvent.C.o CMakeFiles/VIEW.dir/source/VIEW/INPUT/motionTrackingEvent.C.o CMakeFiles/VIEW.dir/source/VIEW/INPUT/notificationEvent.C.o CMakeFiles/VIEW.dir/source/VIEW/INPUT/buttonEvent.C.o CMakeFiles/VIEW.dir/source/VIEW/INPUT/inputDeviceDriver.C.o CMakeFiles/VIEW.dir/source/VIEW/PLUGIN/modularWidgetPlugin.C.o CMakeFiles/VIEW.dir/source/VIEW/PLUGIN/modularWidgetPluginHandler.C.o CMakeFiles/VIEW.dir/source/VIEW/PLUGIN/VIEWPlugin.C.o CMakeFiles/VIEW.dir/source/VIEW/PLUGIN/inputDevPluginHandler.C.o  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib: lib/libBALL.so.1.5 /usr/lib/i386-linux-gnu/libQt5OpenGL.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Test.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5WebEngineWidgets.so.5.15.2 -lGL -lGLU /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 -lpython3.9 -lpthread /usr/lib/i386-linux-gnu/libQt5PrintSupport.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Widgets.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5WebEngineCore.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5WebChannel.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Positioning.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Quick.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Gui.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5QmlModels.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Qml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 
/usr/bin/cmake -E cmake_symlink_library lib/libVIEW.so.1.5 lib/libVIEW.so.1.5 lib/libVIEW.so
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/usr/bin/cmake -S/build/reproducible-path/ball-1.5.0+git20180813.37fc53c -B/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build --check-build-system CMakeFiles/Makefile.cmake 0
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make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/BALLVIEW /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/BALLVIEW /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/BALLVIEW/CMakeFiles/BALLView_autogen.dir/DependInfo.cmake --color=
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cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/BALLVIEW && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/BALLVIEW/CMakeFiles/BALLView_autogen.dir/AutogenInfo.json Release
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cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/BALLVIEW && /usr/lib/qt5/bin/uic -o /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/BALLVIEW/ui_demoTutorialDialog.h /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/BALLVIEW/demoTutorialDialog.ui
[100%] Generating ui_aboutDialog.h
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/BALLVIEW && /usr/lib/qt5/bin/uic -o /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/BALLVIEW/ui_aboutDialog.h /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/BALLVIEW/aboutDialog.ui
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/BALLVIEW /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/BALLVIEW /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/BALLVIEW/CMakeFiles/BALLView.dir/DependInfo.cmake --color=
Scanning dependencies of target BALLView
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make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[100%] Building CXX object source/APPLICATIONS/BALLVIEW/CMakeFiles/BALLView.dir/BALLView_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/BALLVIEW && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/BALLVIEW/BALLView_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/BALLVIEW -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/BALLView.dir/BALLView_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/BALLVIEW/BALLView_autogen/mocs_compilation.cpp
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:49,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/BALLVIEW/BALLView_autogen/EWIEGA46WW/../../../../../../source/APPLICATIONS/BALLVIEW/mainframe.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/BALLVIEW/BALLView_autogen/EWIEGA46WW/moc_mainframe.cpp:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/BALLVIEW/BALLView_autogen/mocs_compilation.cpp:3:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/surface.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/PRIMITIVES/mesh.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/BALLVIEW/BALLView_autogen/EWIEGA46WW/../../../../../../source/APPLICATIONS/BALLVIEW/demoTutorialDialog.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/BALLVIEW/BALLView_autogen/EWIEGA46WW/moc_demoTutorialDialog.cpp:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/BALLVIEW/BALLView_autogen/mocs_compilation.cpp:2:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:49,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/BALLVIEW/BALLView_autogen/EWIEGA46WW/../../../../../../source/APPLICATIONS/BALLVIEW/mainframe.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/BALLVIEW/BALLView_autogen/EWIEGA46WW/moc_mainframe.cpp:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/BALLVIEW/BALLView_autogen/mocs_compilation.cpp:3:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/surface.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/PRIMITIVES/mesh.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/BALLVIEW/BALLView_autogen/EWIEGA46WW/../../../../../../source/APPLICATIONS/BALLVIEW/demoTutorialDialog.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/BALLVIEW/BALLView_autogen/EWIEGA46WW/moc_demoTutorialDialog.cpp:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/BALLVIEW/BALLView_autogen/mocs_compilation.cpp:2:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:49,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/BALLVIEW/BALLView_autogen/EWIEGA46WW/../../../../../../source/APPLICATIONS/BALLVIEW/mainframe.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/BALLVIEW/BALLView_autogen/EWIEGA46WW/moc_mainframe.cpp:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/BALLVIEW/BALLView_autogen/mocs_compilation.cpp:3:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/surface.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/PRIMITIVES/mesh.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/BALLVIEW/BALLView_autogen/EWIEGA46WW/../../../../../../source/APPLICATIONS/BALLVIEW/demoTutorialDialog.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/BALLVIEW/BALLView_autogen/EWIEGA46WW/moc_demoTutorialDialog.cpp:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/BALLVIEW/BALLView_autogen/mocs_compilation.cpp:2:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/BALLVIEW/BALLView_autogen/EWIEGA46WW/../../../../../../source/APPLICATIONS/BALLVIEW/mainframe.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/BALLVIEW/BALLView_autogen/EWIEGA46WW/moc_mainframe.cpp:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/BALLVIEW/BALLView_autogen/mocs_compilation.cpp:3:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor 'BALL::VIEW::FrameBufferFormat::FrameBufferFormat()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:53:38: warning: implicitly-declared 'constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)' is deprecated [-Wdeprecated-copy]
   53 |       pixelFormat(PixelFormat::RGB_32)
      |                                      ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/BALLVIEW/BALLView_autogen/EWIEGA46WW/../../../../../../source/APPLICATIONS/BALLVIEW/mainframe.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/BALLVIEW/BALLView_autogen/EWIEGA46WW/moc_mainframe.cpp:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/BALLVIEW/BALLView_autogen/mocs_compilation.cpp:3:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because 'BALL::VIEW::PixelFormat' has user-provided 'BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)'
  162 |    PixelFormat &operator=(const PixelFormat &f)
      |                 ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/BALLVIEW/BALLView_autogen/EWIEGA46WW/../../../../../../source/APPLICATIONS/BALLVIEW/mainframe.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/BALLVIEW/BALLView_autogen/EWIEGA46WW/moc_mainframe.cpp:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/BALLVIEW/BALLView_autogen/mocs_compilation.cpp:3:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor 'BALL::VIEW::FrameBufferFormat::FrameBufferFormat(BALL::Size, BALL::Size, const BALL::VIEW::PixelFormat&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:60:30: warning: implicitly-declared 'constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)' is deprecated [-Wdeprecated-copy]
   60 |       pixelFormat(pixelFormat)
      |                              ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/BALLVIEW/BALLView_autogen/EWIEGA46WW/../../../../../../source/APPLICATIONS/BALLVIEW/mainframe.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/BALLVIEW/BALLView_autogen/EWIEGA46WW/moc_mainframe.cpp:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/BALLVIEW/BALLView_autogen/mocs_compilation.cpp:3:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because 'BALL::VIEW::PixelFormat' has user-provided 'BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)'
  162 |    PixelFormat &operator=(const PixelFormat &f)
      |                 ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/BALLVIEW/BALLView_autogen/EWIEGA46WW/../../../../../../source/APPLICATIONS/BALLVIEW/mainframe.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/BALLVIEW/BALLView_autogen/EWIEGA46WW/moc_mainframe.cpp:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/BALLVIEW/BALLView_autogen/mocs_compilation.cpp:3:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor 'BALL::VIEW::FrameBufferFormat::FrameBufferFormat(BALL::Size, BALL::Size, BALL::Size, const BALL::VIEW::PixelFormat&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:69:30: warning: implicitly-declared 'constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)' is deprecated [-Wdeprecated-copy]
   69 |       pixelFormat(pixelFormat)
      |                              ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/BALLVIEW/BALLView_autogen/EWIEGA46WW/../../../../../../source/APPLICATIONS/BALLVIEW/mainframe.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/BALLVIEW/BALLView_autogen/EWIEGA46WW/moc_mainframe.cpp:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/BALLVIEW/BALLView_autogen/mocs_compilation.cpp:3:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because 'BALL::VIEW::PixelFormat' has user-provided 'BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)'
  162 |    PixelFormat &operator=(const PixelFormat &f)
      |                 ^~~~~~~~
[100%] Building CXX object source/APPLICATIONS/BALLVIEW/CMakeFiles/BALLView.dir/demoTutorialDialog.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/BALLVIEW && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/BALLVIEW/BALLView_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/BALLVIEW -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/BALLView.dir/demoTutorialDialog.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/BALLVIEW/demoTutorialDialog.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:49,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/BALLVIEW/mainframe.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/BALLVIEW/demoTutorialDialog.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/surface.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/PRIMITIVES/mesh.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/BALLVIEW/demoTutorialDialog.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/BALLVIEW/demoTutorialDialog.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:49,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/BALLVIEW/mainframe.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/BALLVIEW/demoTutorialDialog.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/surface.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/PRIMITIVES/mesh.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/BALLVIEW/demoTutorialDialog.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/BALLVIEW/demoTutorialDialog.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:49,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/BALLVIEW/mainframe.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/BALLVIEW/demoTutorialDialog.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/surface.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/PRIMITIVES/mesh.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/BALLVIEW/demoTutorialDialog.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/BALLVIEW/demoTutorialDialog.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/BALLVIEW/mainframe.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/BALLVIEW/demoTutorialDialog.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor 'BALL::VIEW::FrameBufferFormat::FrameBufferFormat()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:53:38: warning: implicitly-declared 'constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)' is deprecated [-Wdeprecated-copy]
   53 |       pixelFormat(PixelFormat::RGB_32)
      |                                      ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/BALLVIEW/mainframe.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/BALLVIEW/demoTutorialDialog.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because 'BALL::VIEW::PixelFormat' has user-provided 'BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)'
  162 |    PixelFormat &operator=(const PixelFormat &f)
      |                 ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/BALLVIEW/mainframe.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/BALLVIEW/demoTutorialDialog.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor 'BALL::VIEW::FrameBufferFormat::FrameBufferFormat(BALL::Size, BALL::Size, const BALL::VIEW::PixelFormat&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:60:30: warning: implicitly-declared 'constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)' is deprecated [-Wdeprecated-copy]
   60 |       pixelFormat(pixelFormat)
      |                              ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/BALLVIEW/mainframe.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/BALLVIEW/demoTutorialDialog.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because 'BALL::VIEW::PixelFormat' has user-provided 'BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)'
  162 |    PixelFormat &operator=(const PixelFormat &f)
      |                 ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/BALLVIEW/mainframe.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/BALLVIEW/demoTutorialDialog.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor 'BALL::VIEW::FrameBufferFormat::FrameBufferFormat(BALL::Size, BALL::Size, BALL::Size, const BALL::VIEW::PixelFormat&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:69:30: warning: implicitly-declared 'constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)' is deprecated [-Wdeprecated-copy]
   69 |       pixelFormat(pixelFormat)
      |                              ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/BALLVIEW/mainframe.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/BALLVIEW/demoTutorialDialog.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because 'BALL::VIEW::PixelFormat' has user-provided 'BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)'
  162 |    PixelFormat &operator=(const PixelFormat &f)
      |                 ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/BALLVIEW/demoTutorialDialog.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/message.h: In member function 'void BALL::VIEW::SceneMessage::setStage(BALL::VIEW::Stage)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/message.h:409:15: warning: implicitly-declared 'BALL::VIEW::Stage& BALL::VIEW::Stage::operator=(const BALL::VIEW::Stage&)' is deprecated [-Wdeprecated-copy]
  409 |    { stage_ = stage;}
      |               ^~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/RENDERERS/renderer.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/RENDERERS/glRenderer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/BALLVIEW/mainframe.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/BALLVIEW/demoTutorialDialog.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/stage.h:301:4: note: because 'BALL::VIEW::Stage' has user-provided 'BALL::VIEW::Stage::Stage(const BALL::VIEW::Stage&)'
  301 |    Stage(const Stage& stage);
      |    ^~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/embeddable.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/modularWidget.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/BALLVIEW/demoTutorialDialog.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/BALLVIEW/demoTutorialDialog.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94ParametersBase::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:43:3: note: in expansion of macro 'BALL_CREATE'
   43 |   BALL_CREATE(MMFF94ParametersBase)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/molecularStructure.h:57,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/BALLVIEW/demoTutorialDialog.C:19:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/embeddable.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/modularWidget.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/BALLVIEW/demoTutorialDialog.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/BALLVIEW/demoTutorialDialog.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:3: note: in expansion of macro 'BALL_CREATE'
  217 |   BALL_CREATE(MMFF94StretchParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/molecularStructure.h:57,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/BALLVIEW/demoTutorialDialog.C:19:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:226:34: note: because 'BALL::MMFF94StretchParameters' has user-provided 'const BALL::MMFF94StretchParameters& BALL::MMFF94StretchParameters::operator=(const BALL::MMFF94StretchParameters&)'
  226 |   const MMFF94StretchParameters& operator = (const MMFF94StretchParameters& param)
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:185:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  185 |  class BALL_EXPORT MMFF94StretchParameters:
      |                    ^~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/embeddable.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/modularWidget.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/BALLVIEW/demoTutorialDialog.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/BALLVIEW/demoTutorialDialog.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:3: note: in expansion of macro 'BALL_CREATE'
  217 |   BALL_CREATE(MMFF94StretchParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94BendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:3: note: in expansion of macro 'BALL_CREATE'
  271 |   BALL_CREATE(MMFF94BendParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/molecularStructure.h:57,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/BALLVIEW/demoTutorialDialog.C:19:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:280:31: note: because 'BALL::MMFF94BendParameters' has user-provided 'const BALL::MMFF94BendParameters& BALL::MMFF94BendParameters::operator=(const BALL::MMFF94BendParameters&)'
  280 |   const MMFF94BendParameters& operator = (const MMFF94BendParameters& param)
      |                               ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:263:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  263 |  class BALL_EXPORT MMFF94BendParameters
      |                    ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/embeddable.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/modularWidget.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/BALLVIEW/demoTutorialDialog.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/BALLVIEW/demoTutorialDialog.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94BendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:3: note: in expansion of macro 'BALL_CREATE'
  271 |   BALL_CREATE(MMFF94BendParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:3: note: in expansion of macro 'BALL_CREATE'
  318 |   BALL_CREATE(MMFF94StretchBendParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/molecularStructure.h:57,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/BALLVIEW/demoTutorialDialog.C:19:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:327:38: note: because 'BALL::MMFF94StretchBendParameters' has user-provided 'const BALL::MMFF94StretchBendParameters& BALL::MMFF94StretchBendParameters::operator=(const BALL::MMFF94StretchBendParameters&)'
  327 |   const MMFF94StretchBendParameters& operator = (const MMFF94StretchBendParameters& param)
      |                                      ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:310:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  310 |  class BALL_EXPORT MMFF94StretchBendParameters
      |                    ^~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/embeddable.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/modularWidget.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/BALLVIEW/demoTutorialDialog.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/BALLVIEW/demoTutorialDialog.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:3: note: in expansion of macro 'BALL_CREATE'
  318 |   BALL_CREATE(MMFF94StretchBendParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:3: note: in expansion of macro 'BALL_CREATE'
  374 |   BALL_CREATE(MMFF94TorsionParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/molecularStructure.h:57,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/BALLVIEW/demoTutorialDialog.C:19:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:383:34: note: because 'BALL::MMFF94TorsionParameters' has user-provided 'const BALL::MMFF94TorsionParameters& BALL::MMFF94TorsionParameters::operator=(const BALL::MMFF94TorsionParameters&)'
  383 |   const MMFF94TorsionParameters& operator = (const MMFF94TorsionParameters& param)
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:366:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  366 |  class BALL_EXPORT MMFF94TorsionParameters
      |                    ^~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/embeddable.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/modularWidget.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/BALLVIEW/demoTutorialDialog.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/BALLVIEW/demoTutorialDialog.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:3: note: in expansion of macro 'BALL_CREATE'
  374 |   BALL_CREATE(MMFF94TorsionParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:3: note: in expansion of macro 'BALL_CREATE'
  422 |   BALL_CREATE(MMFF94PlaneParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/molecularStructure.h:57,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/BALLVIEW/demoTutorialDialog.C:19:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:431:32: note: because 'BALL::MMFF94PlaneParameters' has user-provided 'const BALL::MMFF94PlaneParameters& BALL::MMFF94PlaneParameters::operator=(const BALL::MMFF94PlaneParameters&)'
  431 |   const MMFF94PlaneParameters& operator = (const MMFF94PlaneParameters& param)
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:414:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  414 |  class BALL_EXPORT MMFF94PlaneParameters
      |                    ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/embeddable.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/modularWidget.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/BALLVIEW/demoTutorialDialog.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/BALLVIEW/demoTutorialDialog.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:3: note: in expansion of macro 'BALL_CREATE'
  422 |   BALL_CREATE(MMFF94PlaneParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:3: note: in expansion of macro 'BALL_CREATE'
  473 |   BALL_CREATE(MMFF94VDWParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/molecularStructure.h:57,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/BALLVIEW/demoTutorialDialog.C:19:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:482:30: note: because 'BALL::MMFF94VDWParameters' has user-provided 'const BALL::MMFF94VDWParameters& BALL::MMFF94VDWParameters::operator=(const BALL::MMFF94VDWParameters&)'
  482 |   const MMFF94VDWParameters& operator = (const MMFF94VDWParameters& param)
      |                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:458:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  458 |  class BALL_EXPORT MMFF94VDWParameters
      |                    ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/embeddable.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/modularWidget.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/BALLVIEW/demoTutorialDialog.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/BALLVIEW/demoTutorialDialog.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:3: note: in expansion of macro 'BALL_CREATE'
  473 |   BALL_CREATE(MMFF94VDWParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94ESParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:3: note: in expansion of macro 'BALL_CREATE'
  530 |   BALL_CREATE(MMFF94ESParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/molecularStructure.h:57,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/BALLVIEW/demoTutorialDialog.C:19:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:539:29: note: because 'BALL::MMFF94ESParameters' has user-provided 'const BALL::MMFF94ESParameters& BALL::MMFF94ESParameters::operator=(const BALL::MMFF94ESParameters&)'
  539 |   const MMFF94ESParameters& operator = (const MMFF94ESParameters& param)
      |                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:525:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  525 |  class BALL_EXPORT MMFF94ESParameters
      |                    ^~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/embeddable.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/modularWidget.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/BALLVIEW/demoTutorialDialog.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/BALLVIEW/demoTutorialDialog.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94ESParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:3: note: in expansion of macro 'BALL_CREATE'
  530 |   BALL_CREATE(MMFF94ESParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/BALLVIEW/demoTutorialDialog.C: In member function 'void BALL::VIEW::DemoTutorialDialog::nextStepDemo_()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/BALLVIEW/demoTutorialDialog.C:595:33: warning: catching polymorphic type 'class BALL::Exception::FileNotFound' by value [-Wcatch-value=]
  595 |   catch(Exception::FileNotFound e)
      |                                 ^
[100%] Building CXX object source/APPLICATIONS/BALLVIEW/CMakeFiles/BALLView.dir/icons.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/BALLVIEW && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/BALLVIEW/BALLView_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/BALLVIEW -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/BALLView.dir/icons.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/BALLVIEW/icons.C
[100%] Building CXX object source/APPLICATIONS/BALLVIEW/CMakeFiles/BALLView.dir/main.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/BALLVIEW && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/BALLVIEW/BALLView_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/BALLVIEW -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/BALLView.dir/main.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/BALLVIEW/main.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:49,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/BALLVIEW/mainframe.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/BALLVIEW/main.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/representation.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/representationManager.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/BALLVIEW/mainframe.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/BALLVIEW/main.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:49,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/BALLVIEW/mainframe.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/BALLVIEW/main.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/representation.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/representationManager.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/BALLVIEW/mainframe.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/BALLVIEW/main.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:49,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/BALLVIEW/mainframe.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/BALLVIEW/main.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/representation.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/representationManager.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/BALLVIEW/mainframe.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/BALLVIEW/main.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/BALLVIEW/mainframe.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/BALLVIEW/main.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor 'BALL::VIEW::FrameBufferFormat::FrameBufferFormat()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:53:38: warning: implicitly-declared 'constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)' is deprecated [-Wdeprecated-copy]
   53 |       pixelFormat(PixelFormat::RGB_32)
      |                                      ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/BALLVIEW/mainframe.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/BALLVIEW/main.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because 'BALL::VIEW::PixelFormat' has user-provided 'BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)'
  162 |    PixelFormat &operator=(const PixelFormat &f)
      |                 ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/BALLVIEW/mainframe.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/BALLVIEW/main.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor 'BALL::VIEW::FrameBufferFormat::FrameBufferFormat(BALL::Size, BALL::Size, const BALL::VIEW::PixelFormat&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:60:30: warning: implicitly-declared 'constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)' is deprecated [-Wdeprecated-copy]
   60 |       pixelFormat(pixelFormat)
      |                              ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/BALLVIEW/mainframe.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/BALLVIEW/main.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because 'BALL::VIEW::PixelFormat' has user-provided 'BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)'
  162 |    PixelFormat &operator=(const PixelFormat &f)
      |                 ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/BALLVIEW/mainframe.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/BALLVIEW/main.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor 'BALL::VIEW::FrameBufferFormat::FrameBufferFormat(BALL::Size, BALL::Size, BALL::Size, const BALL::VIEW::PixelFormat&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:69:30: warning: implicitly-declared 'constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)' is deprecated [-Wdeprecated-copy]
   69 |       pixelFormat(pixelFormat)
      |                              ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/BALLVIEW/mainframe.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/BALLVIEW/main.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because 'BALL::VIEW::PixelFormat' has user-provided 'BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)'
  162 |    PixelFormat &operator=(const PixelFormat &f)
      |                 ^~~~~~~~
[100%] Building CXX object source/APPLICATIONS/BALLVIEW/CMakeFiles/BALLView.dir/mainframe.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/BALLVIEW && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/BALLVIEW/BALLView_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/BALLVIEW -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/BALLView.dir/mainframe.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/BALLVIEW/mainframe.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:49,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/BALLVIEW/mainframe.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/BALLVIEW/mainframe.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/representation.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/representationManager.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/BALLVIEW/mainframe.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/BALLVIEW/mainframe.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:49,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/BALLVIEW/mainframe.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/BALLVIEW/mainframe.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/representation.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/representationManager.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/BALLVIEW/mainframe.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/BALLVIEW/mainframe.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:49,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/BALLVIEW/mainframe.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/BALLVIEW/mainframe.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/representation.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/representationManager.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/BALLVIEW/mainframe.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/BALLVIEW/mainframe.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/BALLVIEW/mainframe.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/BALLVIEW/mainframe.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor 'BALL::VIEW::FrameBufferFormat::FrameBufferFormat()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:53:38: warning: implicitly-declared 'constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)' is deprecated [-Wdeprecated-copy]
   53 |       pixelFormat(PixelFormat::RGB_32)
      |                                      ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/BALLVIEW/mainframe.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/BALLVIEW/mainframe.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because 'BALL::VIEW::PixelFormat' has user-provided 'BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)'
  162 |    PixelFormat &operator=(const PixelFormat &f)
      |                 ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/BALLVIEW/mainframe.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/BALLVIEW/mainframe.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor 'BALL::VIEW::FrameBufferFormat::FrameBufferFormat(BALL::Size, BALL::Size, const BALL::VIEW::PixelFormat&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:60:30: warning: implicitly-declared 'constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)' is deprecated [-Wdeprecated-copy]
   60 |       pixelFormat(pixelFormat)
      |                              ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/BALLVIEW/mainframe.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/BALLVIEW/mainframe.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because 'BALL::VIEW::PixelFormat' has user-provided 'BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)'
  162 |    PixelFormat &operator=(const PixelFormat &f)
      |                 ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/BALLVIEW/mainframe.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/BALLVIEW/mainframe.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor 'BALL::VIEW::FrameBufferFormat::FrameBufferFormat(BALL::Size, BALL::Size, BALL::Size, const BALL::VIEW::PixelFormat&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:69:30: warning: implicitly-declared 'constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)' is deprecated [-Wdeprecated-copy]
   69 |       pixelFormat(pixelFormat)
      |                              ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderWindow.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/BALLVIEW/mainframe.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/BALLVIEW/mainframe.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because 'BALL::VIEW::PixelFormat' has user-provided 'BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)'
  162 |    PixelFormat &operator=(const PixelFormat &f)
      |                 ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/embeddable.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/BALLVIEW/mainframe.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/BALLVIEW/mainframe.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94ParametersBase::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:43:3: note: in expansion of macro 'BALL_CREATE'
   43 |   BALL_CREATE(MMFF94ParametersBase)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/molecularStructure.h:57,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/BALLVIEW/mainframe.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/embeddable.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/BALLVIEW/mainframe.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/BALLVIEW/mainframe.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:3: note: in expansion of macro 'BALL_CREATE'
  217 |   BALL_CREATE(MMFF94StretchParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/molecularStructure.h:57,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/BALLVIEW/mainframe.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:226:34: note: because 'BALL::MMFF94StretchParameters' has user-provided 'const BALL::MMFF94StretchParameters& BALL::MMFF94StretchParameters::operator=(const BALL::MMFF94StretchParameters&)'
  226 |   const MMFF94StretchParameters& operator = (const MMFF94StretchParameters& param)
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:185:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  185 |  class BALL_EXPORT MMFF94StretchParameters:
      |                    ^~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/embeddable.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/BALLVIEW/mainframe.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/BALLVIEW/mainframe.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:3: note: in expansion of macro 'BALL_CREATE'
  217 |   BALL_CREATE(MMFF94StretchParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94BendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:3: note: in expansion of macro 'BALL_CREATE'
  271 |   BALL_CREATE(MMFF94BendParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/molecularStructure.h:57,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/BALLVIEW/mainframe.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:280:31: note: because 'BALL::MMFF94BendParameters' has user-provided 'const BALL::MMFF94BendParameters& BALL::MMFF94BendParameters::operator=(const BALL::MMFF94BendParameters&)'
  280 |   const MMFF94BendParameters& operator = (const MMFF94BendParameters& param)
      |                               ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:263:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  263 |  class BALL_EXPORT MMFF94BendParameters
      |                    ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/embeddable.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/BALLVIEW/mainframe.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/BALLVIEW/mainframe.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94BendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:3: note: in expansion of macro 'BALL_CREATE'
  271 |   BALL_CREATE(MMFF94BendParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:3: note: in expansion of macro 'BALL_CREATE'
  318 |   BALL_CREATE(MMFF94StretchBendParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/molecularStructure.h:57,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/BALLVIEW/mainframe.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:327:38: note: because 'BALL::MMFF94StretchBendParameters' has user-provided 'const BALL::MMFF94StretchBendParameters& BALL::MMFF94StretchBendParameters::operator=(const BALL::MMFF94StretchBendParameters&)'
  327 |   const MMFF94StretchBendParameters& operator = (const MMFF94StretchBendParameters& param)
      |                                      ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:310:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  310 |  class BALL_EXPORT MMFF94StretchBendParameters
      |                    ^~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/embeddable.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/BALLVIEW/mainframe.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/BALLVIEW/mainframe.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:3: note: in expansion of macro 'BALL_CREATE'
  318 |   BALL_CREATE(MMFF94StretchBendParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:3: note: in expansion of macro 'BALL_CREATE'
  374 |   BALL_CREATE(MMFF94TorsionParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/molecularStructure.h:57,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/BALLVIEW/mainframe.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:383:34: note: because 'BALL::MMFF94TorsionParameters' has user-provided 'const BALL::MMFF94TorsionParameters& BALL::MMFF94TorsionParameters::operator=(const BALL::MMFF94TorsionParameters&)'
  383 |   const MMFF94TorsionParameters& operator = (const MMFF94TorsionParameters& param)
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:366:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  366 |  class BALL_EXPORT MMFF94TorsionParameters
      |                    ^~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/embeddable.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/BALLVIEW/mainframe.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/BALLVIEW/mainframe.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:3: note: in expansion of macro 'BALL_CREATE'
  374 |   BALL_CREATE(MMFF94TorsionParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:3: note: in expansion of macro 'BALL_CREATE'
  422 |   BALL_CREATE(MMFF94PlaneParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/molecularStructure.h:57,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/BALLVIEW/mainframe.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:431:32: note: because 'BALL::MMFF94PlaneParameters' has user-provided 'const BALL::MMFF94PlaneParameters& BALL::MMFF94PlaneParameters::operator=(const BALL::MMFF94PlaneParameters&)'
  431 |   const MMFF94PlaneParameters& operator = (const MMFF94PlaneParameters& param)
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:414:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  414 |  class BALL_EXPORT MMFF94PlaneParameters
      |                    ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/embeddable.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/BALLVIEW/mainframe.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/BALLVIEW/mainframe.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:3: note: in expansion of macro 'BALL_CREATE'
  422 |   BALL_CREATE(MMFF94PlaneParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:3: note: in expansion of macro 'BALL_CREATE'
  473 |   BALL_CREATE(MMFF94VDWParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/molecularStructure.h:57,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/BALLVIEW/mainframe.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:482:30: note: because 'BALL::MMFF94VDWParameters' has user-provided 'const BALL::MMFF94VDWParameters& BALL::MMFF94VDWParameters::operator=(const BALL::MMFF94VDWParameters&)'
  482 |   const MMFF94VDWParameters& operator = (const MMFF94VDWParameters& param)
      |                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:458:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  458 |  class BALL_EXPORT MMFF94VDWParameters
      |                    ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/embeddable.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/BALLVIEW/mainframe.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/BALLVIEW/mainframe.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:3: note: in expansion of macro 'BALL_CREATE'
  473 |   BALL_CREATE(MMFF94VDWParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94ESParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:3: note: in expansion of macro 'BALL_CREATE'
  530 |   BALL_CREATE(MMFF94ESParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/molecularStructure.h:57,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/BALLVIEW/mainframe.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:539:29: note: because 'BALL::MMFF94ESParameters' has user-provided 'const BALL::MMFF94ESParameters& BALL::MMFF94ESParameters::operator=(const BALL::MMFF94ESParameters&)'
  539 |   const MMFF94ESParameters& operator = (const MMFF94ESParameters& param)
      |                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:525:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  525 |  class BALL_EXPORT MMFF94ESParameters
      |                    ^~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/embeddable.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/BALLVIEW/mainframe.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/BALLVIEW/mainframe.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94ESParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:3: note: in expansion of macro 'BALL_CREATE'
  530 |   BALL_CREATE(MMFF94ESParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/DIALOGS/labelDialog.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/BALLVIEW/mainframe.C:20:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/message.h: In member function 'void BALL::VIEW::SceneMessage::setStage(BALL::VIEW::Stage)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/message.h:409:15: warning: implicitly-declared 'BALL::VIEW::Stage& BALL::VIEW::Stage::operator=(const BALL::VIEW::Stage&)' is deprecated [-Wdeprecated-copy]
  409 |    { stage_ = stage;}
      |               ^~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/RENDERERS/renderer.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/RENDERERS/glRenderer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/WIDGETS/scene.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/BALLVIEW/mainframe.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/BALLVIEW/mainframe.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/stage.h:301:4: note: because 'BALL::VIEW::Stage' has user-provided 'BALL::VIEW::Stage::Stage(const BALL::VIEW::Stage&)'
  301 |    Stage(const Stage& stage);
      |    ^~~~~
[100%] Linking CXX executable ../../../bin/BALLView
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/BALLVIEW && /usr/bin/cmake -E cmake_link_script CMakeFiles/BALLView.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/BALLView.dir/BALLView_autogen/mocs_compilation.cpp.o CMakeFiles/BALLView.dir/demoTutorialDialog.C.o CMakeFiles/BALLView.dir/icons.C.o CMakeFiles/BALLView.dir/main.C.o CMakeFiles/BALLView.dir/mainframe.C.o -o ../../../bin/BALLView  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib: ../../../lib/libVIEW.so.1.5 -lpthread -lX11 -lGLEW ../../../lib/libBALL.so.1.5 /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 -lpython3.9 -lpthread /usr/lib/i386-linux-gnu/libQt5OpenGL.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Test.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5WebEngineWidgets.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5PrintSupport.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Widgets.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5WebEngineCore.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Positioning.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Quick.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Gui.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5QmlModels.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5WebChannel.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Qml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lGL -lGLU 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[100%] Built target BALLView
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
/usr/bin/cmake -E cmake_progress_start /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/CMakeFiles 0
make[3]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f CMakeFiles/Makefile2 build_tests
make[3]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
/usr/bin/cmake -S/build/reproducible-path/ball-1.5.0+git20180813.37fc53c -B/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build --check-build-system CMakeFiles/Makefile.cmake 0
/usr/bin/cmake -E cmake_progress_start /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/CMakeFiles 76
make  -f CMakeFiles/Makefile2 test/CMakeFiles/build_tests.dir/all
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f CMakeFiles/BALL_autogen.dir/build.make CMakeFiles/BALL_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/CMakeFiles/BALL_autogen.dir/DependInfo.cmake --color=
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f CMakeFiles/BALL_autogen.dir/build.make CMakeFiles/BALL_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[  0%] Automatic MOC for target BALL
/usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/CMakeFiles/BALL_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[  1%] Built target BALL_autogen
make  -f CMakeFiles/BALL.dir/build.make CMakeFiles/BALL.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/CMakeFiles/BALL.dir/DependInfo.cmake --color=
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f CMakeFiles/BALL.dir/build.make CMakeFiles/BALL.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make[5]: Nothing to be done for 'CMakeFiles/BALL.dir/build'.
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 27%] Built target BALL
make  -f test/CMakeFiles/ReissCavFreeEnergyProcessor_test_autogen.dir/build.make test/CMakeFiles/ReissCavFreeEnergyProcessor_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/ReissCavFreeEnergyProcessor_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target ReissCavFreeEnergyProcessor_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/ReissCavFreeEnergyProcessor_test_autogen.dir/build.make test/CMakeFiles/ReissCavFreeEnergyProcessor_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 27%] Automatic MOC for target ReissCavFreeEnergyProcessor_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/ReissCavFreeEnergyProcessor_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 27%] Built target ReissCavFreeEnergyProcessor_test_autogen
make  -f test/CMakeFiles/ReissCavFreeEnergyProcessor_test.dir/build.make test/CMakeFiles/ReissCavFreeEnergyProcessor_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/ReissCavFreeEnergyProcessor_test.dir/DependInfo.cmake --color=
Scanning dependencies of target ReissCavFreeEnergyProcessor_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/ReissCavFreeEnergyProcessor_test.dir/build.make test/CMakeFiles/ReissCavFreeEnergyProcessor_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 27%] Building CXX object test/CMakeFiles/ReissCavFreeEnergyProcessor_test.dir/ReissCavFreeEnergyProcessor_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/ReissCavFreeEnergyProcessor_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/ReissCavFreeEnergyProcessor_test.dir/ReissCavFreeEnergyProcessor_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/ReissCavFreeEnergyProcessor_test_autogen/mocs_compilation.cpp
[ 27%] Building CXX object test/CMakeFiles/ReissCavFreeEnergyProcessor_test.dir/ReissCavFreeEnergyProcessor_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/ReissCavFreeEnergyProcessor_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/ReissCavFreeEnergyProcessor_test.dir/ReissCavFreeEnergyProcessor_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ReissCavFreeEnergyProcessor_test.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/ENERGY/energyProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SOLVATION/reissCavFreeEnergyProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ReissCavFreeEnergyProcessor_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/ENERGY/energyProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SOLVATION/reissCavFreeEnergyProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ReissCavFreeEnergyProcessor_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/ENERGY/energyProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SOLVATION/reissCavFreeEnergyProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ReissCavFreeEnergyProcessor_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/ENERGY/energyProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SOLVATION/reissCavFreeEnergyProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ReissCavFreeEnergyProcessor_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/ENERGY/energyProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SOLVATION/reissCavFreeEnergyProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ReissCavFreeEnergyProcessor_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/ENERGY/energyProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SOLVATION/reissCavFreeEnergyProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ReissCavFreeEnergyProcessor_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 27%] Linking CXX executable ../bin/TEST/ReissCavFreeEnergyProcessor_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/ReissCavFreeEnergyProcessor_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/ReissCavFreeEnergyProcessor_test.dir/ReissCavFreeEnergyProcessor_test_autogen/mocs_compilation.cpp.o CMakeFiles/ReissCavFreeEnergyProcessor_test.dir/ReissCavFreeEnergyProcessor_test.C.o -o ../bin/TEST/ReissCavFreeEnergyProcessor_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
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make  -f CMakeFiles/VIEW_autogen.dir/build.make CMakeFiles/VIEW_autogen.dir/depend
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cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/CMakeFiles/VIEW_autogen.dir/DependInfo.cmake --color=
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f CMakeFiles/VIEW_autogen.dir/build.make CMakeFiles/VIEW_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 27%] Automatic MOC for target VIEW
/usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/CMakeFiles/VIEW_autogen.dir/AutogenInfo.json Release
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cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/CMakeFiles/VIEW.dir/DependInfo.cmake --color=
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cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/HBondModel_test_autogen.dir/DependInfo.cmake --color=
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make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
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[ 42%] Automatic MOC for target HBondModel_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/HBondModel_test_autogen.dir/AutogenInfo.json Release
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cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/HBondModel_test.dir/DependInfo.cmake --color=
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[ 42%] Building CXX object test/CMakeFiles/HBondModel_test.dir/HBondModel_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/HBondModel_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/HBondModel_test.dir/HBondModel_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/HBondModel_test_autogen/mocs_compilation.cpp
[ 42%] Building CXX object test/CMakeFiles/HBondModel_test.dir/HBondModel_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/HBondModel_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/HBondModel_test.dir/HBondModel_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/HBondModel_test.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/secondaryStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBdefs.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/HBondModel_test.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/HBondModel_test.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/secondaryStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBdefs.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/HBondModel_test.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/HBondModel_test.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/secondaryStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBdefs.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/HBondModel_test.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/HBondModel_test.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 42%] Linking CXX executable ../bin/TEST/HBondModel_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/HBondModel_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/HBondModel_test.dir/HBondModel_test_autogen/mocs_compilation.cpp.o CMakeFiles/HBondModel_test.dir/HBondModel_test.C.o -o ../bin/TEST/HBondModel_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libVIEW.so.1.5 -lpthread -lGLEW ../lib/libBALL.so.1.5 /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 -lpython3.9 -lpthread /usr/lib/i386-linux-gnu/libQt5OpenGL.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Test.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5WebEngineWidgets.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5PrintSupport.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Widgets.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5WebEngineCore.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Positioning.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Quick.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Gui.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5QmlModels.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5WebChannel.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Qml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lGL -lGLU 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 42%] Built target HBondModel_test
make  -f test/CMakeFiles/LineModel_test_autogen.dir/build.make test/CMakeFiles/LineModel_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/LineModel_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target LineModel_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/LineModel_test_autogen.dir/build.make test/CMakeFiles/LineModel_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 42%] Automatic MOC for target LineModel_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/LineModel_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 42%] Built target LineModel_test_autogen
make  -f test/CMakeFiles/LineModel_test.dir/build.make test/CMakeFiles/LineModel_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/LineModel_test.dir/DependInfo.cmake --color=
Scanning dependencies of target LineModel_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/LineModel_test.dir/build.make test/CMakeFiles/LineModel_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 42%] Building CXX object test/CMakeFiles/LineModel_test.dir/LineModel_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/LineModel_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/LineModel_test.dir/LineModel_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/LineModel_test_autogen/mocs_compilation.cpp
[ 42%] Building CXX object test/CMakeFiles/LineModel_test.dir/LineModel_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/LineModel_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/LineModel_test.dir/LineModel_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/LineModel_test.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/secondaryStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBdefs.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/LineModel_test.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/LineModel_test.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/secondaryStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBdefs.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/LineModel_test.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/LineModel_test.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/secondaryStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBdefs.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/LineModel_test.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/LineModel_test.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/LineModel_test.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/LineModel_test.C: In function 'int main(int, char**)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:141:49: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  141 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/LineModel_test.C:48:1: note: in expansion of macro 'BALL_FOREACH_INTRABOND'
   48 | BALL_FOREACH_INTRABOND(system, ait, abit)
      | ^~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/LineModel_test.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/LineModel_test.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/LineModel_test.C: In function 'int main(int, char**)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:141:49: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' first required here
  141 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/LineModel_test.C:48:1: note: in expansion of macro 'BALL_FOREACH_INTRABOND'
   48 | BALL_FOREACH_INTRABOND(system, ait, abit)
      | ^~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:143:51: warning: implicitly-declared 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  143 |   for (bond_iterator = (*atom_iterator).beginBond(); \
      |                                                   ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/LineModel_test.C:48:1: note: in expansion of macro 'BALL_FOREACH_INTRABOND'
   48 | BALL_FOREACH_INTRABOND(system, ait, abit)
      | ^~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBdefs.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/LineModel_test.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:437:15: note: because 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::RandomAccessIterator<Container, DataType, Position, Traits>::RandomAccessIterator(const BALL::RandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
  437 |   BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:413:8: warning: implicitly-declared 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  413 |  class RandomAccessIterator
      |        ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:47:15: note: because 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   47 |   BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:24:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   24 |  class ConstRandomAccessIterator
      |        ^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/LineModel_test.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBdefs.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/LineModel_test.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:413:8: note: synthesized method 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' first required here
  413 |  class RandomAccessIterator
      |        ^~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/LineModel_test.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/LineModel_test.C: In function 'int main(int, char**)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:143:51: note: synthesized method 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' first required here
  143 |   for (bond_iterator = (*atom_iterator).beginBond(); \
      |                                                   ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/LineModel_test.C:48:1: note: in expansion of macro 'BALL_FOREACH_INTRABOND'
   48 | BALL_FOREACH_INTRABOND(system, ait, abit)
      | ^~~~~~~~~~~~~~~~~~~~~~
[ 42%] Linking CXX executable ../bin/TEST/LineModel_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/LineModel_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/LineModel_test.dir/LineModel_test_autogen/mocs_compilation.cpp.o CMakeFiles/LineModel_test.dir/LineModel_test.C.o -o ../bin/TEST/LineModel_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libVIEW.so.1.5 -lpthread -lGLEW ../lib/libBALL.so.1.5 /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 -lpython3.9 -lpthread /usr/lib/i386-linux-gnu/libQt5OpenGL.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Test.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5WebEngineWidgets.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5PrintSupport.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Widgets.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5WebEngineCore.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Positioning.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Quick.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Gui.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5QmlModels.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5WebChannel.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Qml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lGL -lGLU 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 42%] Built target LineModel_test
make  -f test/CMakeFiles/LabelModel_test_autogen.dir/build.make test/CMakeFiles/LabelModel_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/LabelModel_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target LabelModel_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/LabelModel_test_autogen.dir/build.make test/CMakeFiles/LabelModel_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 43%] Automatic MOC for target LabelModel_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/LabelModel_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 43%] Built target LabelModel_test_autogen
make  -f test/CMakeFiles/LabelModel_test.dir/build.make test/CMakeFiles/LabelModel_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/LabelModel_test.dir/DependInfo.cmake --color=
Scanning dependencies of target LabelModel_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/LabelModel_test.dir/build.make test/CMakeFiles/LabelModel_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 43%] Building CXX object test/CMakeFiles/LabelModel_test.dir/LabelModel_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/LabelModel_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/LabelModel_test.dir/LabelModel_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/LabelModel_test_autogen/mocs_compilation.cpp
[ 43%] Building CXX object test/CMakeFiles/LabelModel_test.dir/LabelModel_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/LabelModel_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/LabelModel_test.dir/LabelModel_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/LabelModel_test.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/secondaryStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBdefs.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/LabelModel_test.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/LabelModel_test.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/secondaryStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBdefs.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/LabelModel_test.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/LabelModel_test.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/secondaryStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBdefs.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/LabelModel_test.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/LabelModel_test.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 43%] Linking CXX executable ../bin/TEST/LabelModel_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/LabelModel_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/LabelModel_test.dir/LabelModel_test_autogen/mocs_compilation.cpp.o CMakeFiles/LabelModel_test.dir/LabelModel_test.C.o -o ../bin/TEST/LabelModel_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libVIEW.so.1.5 -lpthread -lGLEW ../lib/libBALL.so.1.5 /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 -lpython3.9 -lpthread /usr/lib/i386-linux-gnu/libQt5OpenGL.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Test.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5WebEngineWidgets.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5PrintSupport.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Widgets.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5WebEngineCore.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Positioning.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Quick.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Gui.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5QmlModels.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5WebChannel.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Qml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lGL -lGLU 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 43%] Built target LabelModel_test
make  -f test/CMakeFiles/AddCartoonModel_test_autogen.dir/build.make test/CMakeFiles/AddCartoonModel_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/AddCartoonModel_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target AddCartoonModel_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/AddCartoonModel_test_autogen.dir/build.make test/CMakeFiles/AddCartoonModel_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 43%] Automatic MOC for target AddCartoonModel_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/AddCartoonModel_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 43%] Built target AddCartoonModel_test_autogen
make  -f test/CMakeFiles/AddCartoonModel_test.dir/build.make test/CMakeFiles/AddCartoonModel_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/AddCartoonModel_test.dir/DependInfo.cmake --color=
Scanning dependencies of target AddCartoonModel_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/AddCartoonModel_test.dir/build.make test/CMakeFiles/AddCartoonModel_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 43%] Building CXX object test/CMakeFiles/AddCartoonModel_test.dir/AddCartoonModel_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/AddCartoonModel_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/AddCartoonModel_test.dir/AddCartoonModel_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/AddCartoonModel_test_autogen/mocs_compilation.cpp
[ 43%] Building CXX object test/CMakeFiles/AddCartoonModel_test.dir/AddCartoonModel_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/AddCartoonModel_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/AddCartoonModel_test.dir/AddCartoonModel_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AddCartoonModel_test.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/secondaryStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/MODELS/backboneModel.h:19,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/MODELS/cartoonModel.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AddCartoonModel_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/MODELS/modelProcessor.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/MODELS/backboneModel.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/MODELS/cartoonModel.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AddCartoonModel_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/secondaryStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/MODELS/backboneModel.h:19,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/MODELS/cartoonModel.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AddCartoonModel_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/MODELS/modelProcessor.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/MODELS/backboneModel.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/MODELS/cartoonModel.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AddCartoonModel_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/secondaryStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/MODELS/backboneModel.h:19,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/MODELS/cartoonModel.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AddCartoonModel_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/MODELS/modelProcessor.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/MODELS/backboneModel.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/MODELS/cartoonModel.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AddCartoonModel_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 43%] Linking CXX executable ../bin/TEST/AddCartoonModel_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/AddCartoonModel_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/AddCartoonModel_test.dir/AddCartoonModel_test_autogen/mocs_compilation.cpp.o CMakeFiles/AddCartoonModel_test.dir/AddCartoonModel_test.C.o -o ../bin/TEST/AddCartoonModel_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libVIEW.so.1.5 -lpthread -lGLEW ../lib/libBALL.so.1.5 /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 -lpython3.9 -lpthread /usr/lib/i386-linux-gnu/libQt5OpenGL.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Test.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5WebEngineWidgets.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5PrintSupport.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Widgets.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5WebEngineCore.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Positioning.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Quick.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Gui.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5QmlModels.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5WebChannel.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Qml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lGL -lGLU 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 43%] Built target AddCartoonModel_test
make  -f test/CMakeFiles/XDRPersistenceManager_test_autogen.dir/build.make test/CMakeFiles/XDRPersistenceManager_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/XDRPersistenceManager_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target XDRPersistenceManager_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/XDRPersistenceManager_test_autogen.dir/build.make test/CMakeFiles/XDRPersistenceManager_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 43%] Automatic MOC for target XDRPersistenceManager_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/XDRPersistenceManager_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 43%] Built target XDRPersistenceManager_test_autogen
make  -f test/CMakeFiles/XDRPersistenceManager_test.dir/build.make test/CMakeFiles/XDRPersistenceManager_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/XDRPersistenceManager_test.dir/DependInfo.cmake --color=
Scanning dependencies of target XDRPersistenceManager_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/XDRPersistenceManager_test.dir/build.make test/CMakeFiles/XDRPersistenceManager_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 43%] Building CXX object test/CMakeFiles/XDRPersistenceManager_test.dir/XDRPersistenceManager_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/XDRPersistenceManager_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/XDRPersistenceManager_test.dir/XDRPersistenceManager_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/XDRPersistenceManager_test_autogen/mocs_compilation.cpp
[ 44%] Building CXX object test/CMakeFiles/XDRPersistenceManager_test.dir/XDRPersistenceManager_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/XDRPersistenceManager_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/XDRPersistenceManager_test.dir/XDRPersistenceManager_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/XDRPersistenceManager_test.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/secondaryStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBdefs.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/XDRPersistenceManager_test.C:12:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/XDRPersistenceManager.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/XDRPersistenceManager_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/secondaryStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBdefs.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/XDRPersistenceManager_test.C:12:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/XDRPersistenceManager.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/XDRPersistenceManager_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/secondaryStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBdefs.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/XDRPersistenceManager_test.C:12:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/XDRPersistenceManager.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/XDRPersistenceManager_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 44%] Linking CXX executable ../bin/TEST/XDRPersistenceManager_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/XDRPersistenceManager_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/XDRPersistenceManager_test.dir/XDRPersistenceManager_test_autogen/mocs_compilation.cpp.o CMakeFiles/XDRPersistenceManager_test.dir/XDRPersistenceManager_test.C.o -o ../bin/TEST/XDRPersistenceManager_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 44%] Built target XDRPersistenceManager_test
make  -f test/CMakeFiles/RRModel_test_autogen.dir/build.make test/CMakeFiles/RRModel_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/RRModel_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target RRModel_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/RRModel_test_autogen.dir/build.make test/CMakeFiles/RRModel_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 44%] Automatic MOC for target RRModel_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/RRModel_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 44%] Built target RRModel_test_autogen
make  -f test/CMakeFiles/RRModel_test.dir/build.make test/CMakeFiles/RRModel_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/RRModel_test.dir/DependInfo.cmake --color=
Scanning dependencies of target RRModel_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/RRModel_test.dir/build.make test/CMakeFiles/RRModel_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 44%] Building CXX object test/CMakeFiles/RRModel_test.dir/RRModel_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/RRModel_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/RRModel_test.dir/RRModel_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/RRModel_test_autogen/mocs_compilation.cpp
[ 44%] Building CXX object test/CMakeFiles/RRModel_test.dir/RRModel_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/RRModel_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/RRModel_test.dir/RRModel_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/RRModel_test.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/RRModel_test.C:4:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/RRModel_test.C:4:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/RRModel_test.C:4:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/RRModel_test.C:4:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/RRModel_test.C:4:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/RRModel_test.C:4:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 44%] Linking CXX executable ../bin/TEST/RRModel_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/RRModel_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/RRModel_test.dir/RRModel_test_autogen/mocs_compilation.cpp.o CMakeFiles/RRModel_test.dir/RRModel_test.C.o -o ../bin/TEST/RRModel_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 44%] Built target RRModel_test
make  -f test/CMakeFiles/PLSModel_test_autogen.dir/build.make test/CMakeFiles/PLSModel_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/PLSModel_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target PLSModel_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/PLSModel_test_autogen.dir/build.make test/CMakeFiles/PLSModel_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 44%] Automatic MOC for target PLSModel_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/PLSModel_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 44%] Built target PLSModel_test_autogen
make  -f test/CMakeFiles/PLSModel_test.dir/build.make test/CMakeFiles/PLSModel_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/PLSModel_test.dir/DependInfo.cmake --color=
Scanning dependencies of target PLSModel_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/PLSModel_test.dir/build.make test/CMakeFiles/PLSModel_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 44%] Building CXX object test/CMakeFiles/PLSModel_test.dir/PLSModel_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/PLSModel_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/PLSModel_test.dir/PLSModel_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/PLSModel_test_autogen/mocs_compilation.cpp
[ 44%] Building CXX object test/CMakeFiles/PLSModel_test.dir/PLSModel_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/PLSModel_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/PLSModel_test.dir/PLSModel_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/PLSModel_test.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/PLSModel_test.C:4:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/PLSModel_test.C:4:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/PLSModel_test.C:4:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/PLSModel_test.C:4:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/PLSModel_test.C:4:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/PLSModel_test.C:4:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 44%] Linking CXX executable ../bin/TEST/PLSModel_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/PLSModel_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/PLSModel_test.dir/PLSModel_test_autogen/mocs_compilation.cpp.o CMakeFiles/PLSModel_test.dir/PLSModel_test.C.o -o ../bin/TEST/PLSModel_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 44%] Built target PLSModel_test
make  -f test/CMakeFiles/LDAModel_test_autogen.dir/build.make test/CMakeFiles/LDAModel_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/LDAModel_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target LDAModel_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/LDAModel_test_autogen.dir/build.make test/CMakeFiles/LDAModel_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 44%] Automatic MOC for target LDAModel_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/LDAModel_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 44%] Built target LDAModel_test_autogen
make  -f test/CMakeFiles/LDAModel_test.dir/build.make test/CMakeFiles/LDAModel_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/LDAModel_test.dir/DependInfo.cmake --color=
Scanning dependencies of target LDAModel_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/LDAModel_test.dir/build.make test/CMakeFiles/LDAModel_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 44%] Building CXX object test/CMakeFiles/LDAModel_test.dir/LDAModel_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/LDAModel_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/LDAModel_test.dir/LDAModel_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/LDAModel_test_autogen/mocs_compilation.cpp
[ 44%] Building CXX object test/CMakeFiles/LDAModel_test.dir/LDAModel_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/LDAModel_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/LDAModel_test.dir/LDAModel_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/LDAModel_test.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/LDAModel_test.C:4:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/LDAModel_test.C:4:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/LDAModel_test.C:4:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/LDAModel_test.C:4:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/LDAModel_test.C:4:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/LDAModel_test.C:4:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 44%] Linking CXX executable ../bin/TEST/LDAModel_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/LDAModel_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/LDAModel_test.dir/LDAModel_test_autogen/mocs_compilation.cpp.o CMakeFiles/LDAModel_test.dir/LDAModel_test.C.o -o ../bin/TEST/LDAModel_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 44%] Built target LDAModel_test
make  -f test/CMakeFiles/KPLSModel_test_autogen.dir/build.make test/CMakeFiles/KPLSModel_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/KPLSModel_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target KPLSModel_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/KPLSModel_test_autogen.dir/build.make test/CMakeFiles/KPLSModel_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 44%] Automatic MOC for target KPLSModel_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/KPLSModel_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 44%] Built target KPLSModel_test_autogen
make  -f test/CMakeFiles/KPLSModel_test.dir/build.make test/CMakeFiles/KPLSModel_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/KPLSModel_test.dir/DependInfo.cmake --color=
Scanning dependencies of target KPLSModel_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/KPLSModel_test.dir/build.make test/CMakeFiles/KPLSModel_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 44%] Building CXX object test/CMakeFiles/KPLSModel_test.dir/KPLSModel_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/KPLSModel_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/KPLSModel_test.dir/KPLSModel_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/KPLSModel_test_autogen/mocs_compilation.cpp
[ 44%] Building CXX object test/CMakeFiles/KPLSModel_test.dir/KPLSModel_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/KPLSModel_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/KPLSModel_test.dir/KPLSModel_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/KPLSModel_test.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/KPLSModel_test.C:4:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/KPLSModel_test.C:4:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/KPLSModel_test.C:4:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/KPLSModel_test.C:4:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/KPLSModel_test.C:4:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/KPLSModel_test.C:4:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 44%] Linking CXX executable ../bin/TEST/KPLSModel_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/KPLSModel_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/KPLSModel_test.dir/KPLSModel_test_autogen/mocs_compilation.cpp.o CMakeFiles/KPLSModel_test.dir/KPLSModel_test.C.o -o ../bin/TEST/KPLSModel_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 44%] Built target KPLSModel_test
make  -f test/CMakeFiles/KPCRModel_test_autogen.dir/build.make test/CMakeFiles/KPCRModel_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/KPCRModel_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target KPCRModel_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/KPCRModel_test_autogen.dir/build.make test/CMakeFiles/KPCRModel_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 44%] Automatic MOC for target KPCRModel_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/KPCRModel_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 44%] Built target KPCRModel_test_autogen
make  -f test/CMakeFiles/KPCRModel_test.dir/build.make test/CMakeFiles/KPCRModel_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/KPCRModel_test.dir/DependInfo.cmake --color=
Scanning dependencies of target KPCRModel_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/KPCRModel_test.dir/build.make test/CMakeFiles/KPCRModel_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 44%] Building CXX object test/CMakeFiles/KPCRModel_test.dir/KPCRModel_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/KPCRModel_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/KPCRModel_test.dir/KPCRModel_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/KPCRModel_test_autogen/mocs_compilation.cpp
[ 44%] Building CXX object test/CMakeFiles/KPCRModel_test.dir/KPCRModel_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/KPCRModel_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/KPCRModel_test.dir/KPCRModel_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/KPCRModel_test.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/KPCRModel_test.C:4:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/KPCRModel_test.C:4:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/KPCRModel_test.C:4:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/KPCRModel_test.C:4:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/KPCRModel_test.C:4:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/KPCRModel_test.C:4:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 44%] Linking CXX executable ../bin/TEST/KPCRModel_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/KPCRModel_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/KPCRModel_test.dir/KPCRModel_test_autogen/mocs_compilation.cpp.o CMakeFiles/KPCRModel_test.dir/KPCRModel_test.C.o -o ../bin/TEST/KPCRModel_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 44%] Built target KPCRModel_test
make  -f test/CMakeFiles/KNNModel_test_autogen.dir/build.make test/CMakeFiles/KNNModel_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/KNNModel_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target KNNModel_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/KNNModel_test_autogen.dir/build.make test/CMakeFiles/KNNModel_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 44%] Automatic MOC for target KNNModel_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/KNNModel_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 44%] Built target KNNModel_test_autogen
make  -f test/CMakeFiles/KNNModel_test.dir/build.make test/CMakeFiles/KNNModel_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/KNNModel_test.dir/DependInfo.cmake --color=
Scanning dependencies of target KNNModel_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/KNNModel_test.dir/build.make test/CMakeFiles/KNNModel_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 44%] Building CXX object test/CMakeFiles/KNNModel_test.dir/KNNModel_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/KNNModel_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/KNNModel_test.dir/KNNModel_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/KNNModel_test_autogen/mocs_compilation.cpp
[ 44%] Building CXX object test/CMakeFiles/KNNModel_test.dir/KNNModel_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/KNNModel_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/KNNModel_test.dir/KNNModel_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/KNNModel_test.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/KNNModel_test.C:4:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/KNNModel_test.C:4:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/KNNModel_test.C:4:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/KNNModel_test.C:4:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/KNNModel_test.C:4:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/KNNModel_test.C:4:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 44%] Linking CXX executable ../bin/TEST/KNNModel_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/KNNModel_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/KNNModel_test.dir/KNNModel_test_autogen/mocs_compilation.cpp.o CMakeFiles/KNNModel_test.dir/KNNModel_test.C.o -o ../bin/TEST/KNNModel_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 44%] Built target KNNModel_test
make  -f test/CMakeFiles/GPModel_test_autogen.dir/build.make test/CMakeFiles/GPModel_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/GPModel_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target GPModel_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/GPModel_test_autogen.dir/build.make test/CMakeFiles/GPModel_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 44%] Automatic MOC for target GPModel_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/GPModel_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 44%] Built target GPModel_test_autogen
make  -f test/CMakeFiles/GPModel_test.dir/build.make test/CMakeFiles/GPModel_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/GPModel_test.dir/DependInfo.cmake --color=
Scanning dependencies of target GPModel_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/GPModel_test.dir/build.make test/CMakeFiles/GPModel_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 44%] Building CXX object test/CMakeFiles/GPModel_test.dir/GPModel_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/GPModel_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/GPModel_test.dir/GPModel_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/GPModel_test_autogen/mocs_compilation.cpp
[ 44%] Building CXX object test/CMakeFiles/GPModel_test.dir/GPModel_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/GPModel_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/GPModel_test.dir/GPModel_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/GPModel_test.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/GPModel_test.C:4:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/GPModel_test.C:4:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/GPModel_test.C:4:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/GPModel_test.C:4:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/GPModel_test.C:4:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/GPModel_test.C:4:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 44%] Linking CXX executable ../bin/TEST/GPModel_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/GPModel_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/GPModel_test.dir/GPModel_test_autogen/mocs_compilation.cpp.o CMakeFiles/GPModel_test.dir/GPModel_test.C.o -o ../bin/TEST/GPModel_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 44%] Built target GPModel_test
make  -f test/CMakeFiles/ALLModel_test_autogen.dir/build.make test/CMakeFiles/ALLModel_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/ALLModel_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target ALLModel_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/ALLModel_test_autogen.dir/build.make test/CMakeFiles/ALLModel_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 44%] Automatic MOC for target ALLModel_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/ALLModel_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 44%] Built target ALLModel_test_autogen
make  -f test/CMakeFiles/ALLModel_test.dir/build.make test/CMakeFiles/ALLModel_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/ALLModel_test.dir/DependInfo.cmake --color=
Scanning dependencies of target ALLModel_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/ALLModel_test.dir/build.make test/CMakeFiles/ALLModel_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 44%] Building CXX object test/CMakeFiles/ALLModel_test.dir/ALLModel_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/ALLModel_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/ALLModel_test.dir/ALLModel_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/ALLModel_test_autogen/mocs_compilation.cpp
[ 44%] Building CXX object test/CMakeFiles/ALLModel_test.dir/ALLModel_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/ALLModel_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/ALLModel_test.dir/ALLModel_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ALLModel_test.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ALLModel_test.C:4:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ALLModel_test.C:4:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ALLModel_test.C:4:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ALLModel_test.C:4:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ALLModel_test.C:4:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ALLModel_test.C:4:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 44%] Linking CXX executable ../bin/TEST/ALLModel_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/ALLModel_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/ALLModel_test.dir/ALLModel_test_autogen/mocs_compilation.cpp.o CMakeFiles/ALLModel_test.dir/ALLModel_test.C.o -o ../bin/TEST/ALLModel_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 44%] Built target ALLModel_test
make  -f test/CMakeFiles/NBModel_test_autogen.dir/build.make test/CMakeFiles/NBModel_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/NBModel_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target NBModel_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/NBModel_test_autogen.dir/build.make test/CMakeFiles/NBModel_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 44%] Automatic MOC for target NBModel_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/NBModel_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 44%] Built target NBModel_test_autogen
make  -f test/CMakeFiles/NBModel_test.dir/build.make test/CMakeFiles/NBModel_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/NBModel_test.dir/DependInfo.cmake --color=
Scanning dependencies of target NBModel_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/NBModel_test.dir/build.make test/CMakeFiles/NBModel_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 44%] Building CXX object test/CMakeFiles/NBModel_test.dir/NBModel_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/NBModel_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/NBModel_test.dir/NBModel_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/NBModel_test_autogen/mocs_compilation.cpp
[ 44%] Building CXX object test/CMakeFiles/NBModel_test.dir/NBModel_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/NBModel_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/NBModel_test.dir/NBModel_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/NBModel_test.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/NBModel_test.C:4:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/NBModel_test.C:4:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/NBModel_test.C:4:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/NBModel_test.C:4:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/NBModel_test.C:4:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/NBModel_test.C:4:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 44%] Linking CXX executable ../bin/TEST/NBModel_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/NBModel_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/NBModel_test.dir/NBModel_test_autogen/mocs_compilation.cpp.o CMakeFiles/NBModel_test.dir/NBModel_test.C.o -o ../bin/TEST/NBModel_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 44%] Built target NBModel_test
make  -f test/CMakeFiles/SurfaceBase_test_autogen.dir/build.make test/CMakeFiles/SurfaceBase_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/SurfaceBase_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target SurfaceBase_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/SurfaceBase_test_autogen.dir/build.make test/CMakeFiles/SurfaceBase_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 44%] Automatic MOC for target SurfaceBase_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/SurfaceBase_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 44%] Built target SurfaceBase_test_autogen
make  -f test/CMakeFiles/SurfaceBase_test.dir/build.make test/CMakeFiles/SurfaceBase_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/SurfaceBase_test.dir/DependInfo.cmake --color=
Scanning dependencies of target SurfaceBase_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/SurfaceBase_test.dir/build.make test/CMakeFiles/SurfaceBase_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 44%] Building CXX object test/CMakeFiles/SurfaceBase_test.dir/SurfaceBase_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/SurfaceBase_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/SurfaceBase_test.dir/SurfaceBase_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/SurfaceBase_test_autogen/mocs_compilation.cpp
[ 44%] Building CXX object test/CMakeFiles/SurfaceBase_test.dir/SurfaceBase_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/SurfaceBase_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/SurfaceBase_test.dir/SurfaceBase_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/SurfaceBase_test.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/descriptor.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/surfaceBase.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/SurfaceBase_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/descriptor.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/surfaceBase.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/SurfaceBase_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/descriptor.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/surfaceBase.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/SurfaceBase_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/descriptor.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/surfaceBase.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/SurfaceBase_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/descriptor.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/surfaceBase.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/SurfaceBase_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/descriptor.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/surfaceBase.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/SurfaceBase_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 44%] Linking CXX executable ../bin/TEST/SurfaceBase_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/SurfaceBase_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/SurfaceBase_test.dir/SurfaceBase_test_autogen/mocs_compilation.cpp.o CMakeFiles/SurfaceBase_test.dir/SurfaceBase_test.C.o -o ../bin/TEST/SurfaceBase_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 44%] Built target SurfaceBase_test
make  -f test/CMakeFiles/SimpleDescriptors_test_autogen.dir/build.make test/CMakeFiles/SimpleDescriptors_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/SimpleDescriptors_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target SimpleDescriptors_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/SimpleDescriptors_test_autogen.dir/build.make test/CMakeFiles/SimpleDescriptors_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 44%] Automatic MOC for target SimpleDescriptors_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/SimpleDescriptors_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 44%] Built target SimpleDescriptors_test_autogen
make  -f test/CMakeFiles/SimpleDescriptors_test.dir/build.make test/CMakeFiles/SimpleDescriptors_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/SimpleDescriptors_test.dir/DependInfo.cmake --color=
Scanning dependencies of target SimpleDescriptors_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/SimpleDescriptors_test.dir/build.make test/CMakeFiles/SimpleDescriptors_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 44%] Building CXX object test/CMakeFiles/SimpleDescriptors_test.dir/SimpleDescriptors_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/SimpleDescriptors_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/SimpleDescriptors_test.dir/SimpleDescriptors_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/SimpleDescriptors_test_autogen/mocs_compilation.cpp
[ 44%] Building CXX object test/CMakeFiles/SimpleDescriptors_test.dir/SimpleDescriptors_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/SimpleDescriptors_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/SimpleDescriptors_test.dir/SimpleDescriptors_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/SimpleDescriptors_test.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/descriptor.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/SimpleDescriptors_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/descriptor.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/SimpleDescriptors_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/descriptor.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/SimpleDescriptors_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/descriptor.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/SimpleDescriptors_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/descriptor.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/SimpleDescriptors_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/descriptor.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/SimpleDescriptors_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 44%] Linking CXX executable ../bin/TEST/SimpleDescriptors_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/SimpleDescriptors_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/SimpleDescriptors_test.dir/SimpleDescriptors_test_autogen/mocs_compilation.cpp.o CMakeFiles/SimpleDescriptors_test.dir/SimpleDescriptors_test.C.o -o ../bin/TEST/SimpleDescriptors_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 44%] Built target SimpleDescriptors_test
make  -f test/CMakeFiles/RingPerceptionProcessor_test_autogen.dir/build.make test/CMakeFiles/RingPerceptionProcessor_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/RingPerceptionProcessor_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target RingPerceptionProcessor_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/RingPerceptionProcessor_test_autogen.dir/build.make test/CMakeFiles/RingPerceptionProcessor_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 44%] Automatic MOC for target RingPerceptionProcessor_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/RingPerceptionProcessor_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 44%] Built target RingPerceptionProcessor_test_autogen
make  -f test/CMakeFiles/RingPerceptionProcessor_test.dir/build.make test/CMakeFiles/RingPerceptionProcessor_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/RingPerceptionProcessor_test.dir/DependInfo.cmake --color=
Scanning dependencies of target RingPerceptionProcessor_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/RingPerceptionProcessor_test.dir/build.make test/CMakeFiles/RingPerceptionProcessor_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 46%] Building CXX object test/CMakeFiles/RingPerceptionProcessor_test.dir/RingPerceptionProcessor_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/RingPerceptionProcessor_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/RingPerceptionProcessor_test.dir/RingPerceptionProcessor_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/RingPerceptionProcessor_test_autogen/mocs_compilation.cpp
[ 46%] Building CXX object test/CMakeFiles/RingPerceptionProcessor_test.dir/RingPerceptionProcessor_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/RingPerceptionProcessor_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/RingPerceptionProcessor_test.dir/RingPerceptionProcessor_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/RingPerceptionProcessor_test.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/ringPerceptionProcessor.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/RingPerceptionProcessor_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/ringPerceptionProcessor.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/RingPerceptionProcessor_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/ringPerceptionProcessor.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/RingPerceptionProcessor_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/ringPerceptionProcessor.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/RingPerceptionProcessor_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/ringPerceptionProcessor.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/RingPerceptionProcessor_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/ringPerceptionProcessor.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/RingPerceptionProcessor_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/RingPerceptionProcessor_test.C: In function 'int main(int, char**)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/RingPerceptionProcessor_test.C:61:30: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   61 |   a_it = molecule->beginAtom();
      |                              ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/ringPerceptionProcessor.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/RingPerceptionProcessor_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/RingPerceptionProcessor_test.C:16:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:108:49: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  108 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/RingPerceptionProcessor_test.C:63:3: note: in expansion of macro 'BALL_FOREACH_BOND'
   63 |   BALL_FOREACH_BOND(*molecule, a_it, b_it)
      |   ^~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/ringPerceptionProcessor.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/RingPerceptionProcessor_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/RingPerceptionProcessor_test.C:16:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:110:51: warning: implicitly-declared 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  110 |   for (bond_iterator = (*atom_iterator).beginBond(); \
      |                                                   ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/RingPerceptionProcessor_test.C:63:3: note: in expansion of macro 'BALL_FOREACH_BOND'
   63 |   BALL_FOREACH_BOND(*molecule, a_it, b_it)
      |   ^~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/ringPerceptionProcessor.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/RingPerceptionProcessor_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:47:15: note: because 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   47 |   BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:24:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   24 |  class ConstRandomAccessIterator
      |        ^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/ringPerceptionProcessor.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/RingPerceptionProcessor_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/RingPerceptionProcessor_test.C:16:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/RingPerceptionProcessor_test.C: In function 'int main(int, char**)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:110:51: note: synthesized method 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' first required here
  110 |   for (bond_iterator = (*atom_iterator).beginBond(); \
      |                                                   ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/RingPerceptionProcessor_test.C:63:3: note: in expansion of macro 'BALL_FOREACH_BOND'
   63 |   BALL_FOREACH_BOND(*molecule, a_it, b_it)
      |   ^~~~~~~~~~~~~~~~~
[ 46%] Linking CXX executable ../bin/TEST/RingPerceptionProcessor_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/RingPerceptionProcessor_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/RingPerceptionProcessor_test.dir/RingPerceptionProcessor_test_autogen/mocs_compilation.cpp.o CMakeFiles/RingPerceptionProcessor_test.dir/RingPerceptionProcessor_test.C.o -o ../bin/TEST/RingPerceptionProcessor_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 46%] Built target RingPerceptionProcessor_test
make  -f test/CMakeFiles/PartialChargeDescriptors_test_autogen.dir/build.make test/CMakeFiles/PartialChargeDescriptors_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/PartialChargeDescriptors_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target PartialChargeDescriptors_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/PartialChargeDescriptors_test_autogen.dir/build.make test/CMakeFiles/PartialChargeDescriptors_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 46%] Automatic MOC for target PartialChargeDescriptors_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/PartialChargeDescriptors_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 46%] Built target PartialChargeDescriptors_test_autogen
make  -f test/CMakeFiles/PartialChargeDescriptors_test.dir/build.make test/CMakeFiles/PartialChargeDescriptors_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/PartialChargeDescriptors_test.dir/DependInfo.cmake --color=
Scanning dependencies of target PartialChargeDescriptors_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/PartialChargeDescriptors_test.dir/build.make test/CMakeFiles/PartialChargeDescriptors_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 46%] Building CXX object test/CMakeFiles/PartialChargeDescriptors_test.dir/PartialChargeDescriptors_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/PartialChargeDescriptors_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/PartialChargeDescriptors_test.dir/PartialChargeDescriptors_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/PartialChargeDescriptors_test_autogen/mocs_compilation.cpp
[ 46%] Building CXX object test/CMakeFiles/PartialChargeDescriptors_test.dir/PartialChargeDescriptors_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/PartialChargeDescriptors_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/PartialChargeDescriptors_test.dir/PartialChargeDescriptors_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/PartialChargeDescriptors_test.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/descriptor.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/partialChargeBase.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/partialChargeDescriptors.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/PartialChargeDescriptors_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/descriptor.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/partialChargeBase.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/partialChargeDescriptors.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/PartialChargeDescriptors_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/descriptor.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/partialChargeBase.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/partialChargeDescriptors.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/PartialChargeDescriptors_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/descriptor.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/partialChargeBase.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/partialChargeDescriptors.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/PartialChargeDescriptors_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/descriptor.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/partialChargeBase.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/partialChargeDescriptors.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/PartialChargeDescriptors_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/descriptor.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/partialChargeBase.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/partialChargeDescriptors.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/PartialChargeDescriptors_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 47%] Linking CXX executable ../bin/TEST/PartialChargeDescriptors_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/PartialChargeDescriptors_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/PartialChargeDescriptors_test.dir/PartialChargeDescriptors_test_autogen/mocs_compilation.cpp.o CMakeFiles/PartialChargeDescriptors_test.dir/PartialChargeDescriptors_test.C.o -o ../bin/TEST/PartialChargeDescriptors_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 47%] Built target PartialChargeDescriptors_test
make  -f test/CMakeFiles/PartialChargeBase_test_autogen.dir/build.make test/CMakeFiles/PartialChargeBase_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/PartialChargeBase_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target PartialChargeBase_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/PartialChargeBase_test_autogen.dir/build.make test/CMakeFiles/PartialChargeBase_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 47%] Automatic MOC for target PartialChargeBase_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/PartialChargeBase_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 47%] Built target PartialChargeBase_test_autogen
make  -f test/CMakeFiles/PartialChargeBase_test.dir/build.make test/CMakeFiles/PartialChargeBase_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/PartialChargeBase_test.dir/DependInfo.cmake --color=
Scanning dependencies of target PartialChargeBase_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/PartialChargeBase_test.dir/build.make test/CMakeFiles/PartialChargeBase_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 47%] Building CXX object test/CMakeFiles/PartialChargeBase_test.dir/PartialChargeBase_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/PartialChargeBase_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/PartialChargeBase_test.dir/PartialChargeBase_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/PartialChargeBase_test_autogen/mocs_compilation.cpp
[ 47%] Building CXX object test/CMakeFiles/PartialChargeBase_test.dir/PartialChargeBase_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/PartialChargeBase_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/PartialChargeBase_test.dir/PartialChargeBase_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/PartialChargeBase_test.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/descriptor.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/partialChargeBase.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/PartialChargeBase_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/descriptor.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/partialChargeBase.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/PartialChargeBase_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/descriptor.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/partialChargeBase.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/PartialChargeBase_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/descriptor.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/partialChargeBase.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/PartialChargeBase_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/descriptor.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/partialChargeBase.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/PartialChargeBase_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/descriptor.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/partialChargeBase.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/PartialChargeBase_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 47%] Linking CXX executable ../bin/TEST/PartialChargeBase_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/PartialChargeBase_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/PartialChargeBase_test.dir/PartialChargeBase_test_autogen/mocs_compilation.cpp.o CMakeFiles/PartialChargeBase_test.dir/PartialChargeBase_test.C.o -o ../bin/TEST/PartialChargeBase_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 47%] Built target PartialChargeBase_test
make  -f test/CMakeFiles/Descriptors_test_autogen.dir/build.make test/CMakeFiles/Descriptors_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/Descriptors_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target Descriptors_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/Descriptors_test_autogen.dir/build.make test/CMakeFiles/Descriptors_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 47%] Automatic MOC for target Descriptors_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/Descriptors_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 47%] Built target Descriptors_test_autogen
make  -f test/CMakeFiles/Descriptors_test.dir/build.make test/CMakeFiles/Descriptors_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/Descriptors_test.dir/DependInfo.cmake --color=
Scanning dependencies of target Descriptors_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/Descriptors_test.dir/build.make test/CMakeFiles/Descriptors_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 47%] Building CXX object test/CMakeFiles/Descriptors_test.dir/Descriptors_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/Descriptors_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Descriptors_test.dir/Descriptors_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/Descriptors_test_autogen/mocs_compilation.cpp
[ 47%] Building CXX object test/CMakeFiles/Descriptors_test.dir/Descriptors_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/Descriptors_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Descriptors_test.dir/Descriptors_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Descriptors_test.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/descriptor.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Descriptors_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/descriptor.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Descriptors_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/descriptor.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Descriptors_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/descriptor.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Descriptors_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/descriptor.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Descriptors_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/descriptor.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Descriptors_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 48%] Linking CXX executable ../bin/TEST/Descriptors_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/Descriptors_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Descriptors_test.dir/Descriptors_test_autogen/mocs_compilation.cpp.o CMakeFiles/Descriptors_test.dir/Descriptors_test.C.o -o ../bin/TEST/Descriptors_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 48%] Built target Descriptors_test
make  -f test/CMakeFiles/ConnectivityDescriptors_test_autogen.dir/build.make test/CMakeFiles/ConnectivityDescriptors_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/ConnectivityDescriptors_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target ConnectivityDescriptors_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/ConnectivityDescriptors_test_autogen.dir/build.make test/CMakeFiles/ConnectivityDescriptors_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 48%] Automatic MOC for target ConnectivityDescriptors_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/ConnectivityDescriptors_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 48%] Built target ConnectivityDescriptors_test_autogen
make  -f test/CMakeFiles/ConnectivityDescriptors_test.dir/build.make test/CMakeFiles/ConnectivityDescriptors_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/ConnectivityDescriptors_test.dir/DependInfo.cmake --color=
Scanning dependencies of target ConnectivityDescriptors_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/ConnectivityDescriptors_test.dir/build.make test/CMakeFiles/ConnectivityDescriptors_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 50%] Building CXX object test/CMakeFiles/ConnectivityDescriptors_test.dir/ConnectivityDescriptors_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/ConnectivityDescriptors_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/ConnectivityDescriptors_test.dir/ConnectivityDescriptors_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/ConnectivityDescriptors_test_autogen/mocs_compilation.cpp
[ 50%] Building CXX object test/CMakeFiles/ConnectivityDescriptors_test.dir/ConnectivityDescriptors_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/ConnectivityDescriptors_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/ConnectivityDescriptors_test.dir/ConnectivityDescriptors_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ConnectivityDescriptors_test.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/descriptor.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ConnectivityDescriptors_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/descriptor.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ConnectivityDescriptors_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/descriptor.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ConnectivityDescriptors_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/descriptor.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ConnectivityDescriptors_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/descriptor.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ConnectivityDescriptors_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/descriptor.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ConnectivityDescriptors_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 50%] Linking CXX executable ../bin/TEST/ConnectivityDescriptors_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/ConnectivityDescriptors_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/ConnectivityDescriptors_test.dir/ConnectivityDescriptors_test_autogen/mocs_compilation.cpp.o CMakeFiles/ConnectivityDescriptors_test.dir/ConnectivityDescriptors_test.C.o -o ../bin/TEST/ConnectivityDescriptors_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 50%] Built target ConnectivityDescriptors_test
make  -f test/CMakeFiles/ConnectivityBase_test_autogen.dir/build.make test/CMakeFiles/ConnectivityBase_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/ConnectivityBase_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target ConnectivityBase_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/ConnectivityBase_test_autogen.dir/build.make test/CMakeFiles/ConnectivityBase_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 50%] Automatic MOC for target ConnectivityBase_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/ConnectivityBase_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 50%] Built target ConnectivityBase_test_autogen
make  -f test/CMakeFiles/ConnectivityBase_test.dir/build.make test/CMakeFiles/ConnectivityBase_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/ConnectivityBase_test.dir/DependInfo.cmake --color=
Scanning dependencies of target ConnectivityBase_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/ConnectivityBase_test.dir/build.make test/CMakeFiles/ConnectivityBase_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 50%] Building CXX object test/CMakeFiles/ConnectivityBase_test.dir/ConnectivityBase_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/ConnectivityBase_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/ConnectivityBase_test.dir/ConnectivityBase_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/ConnectivityBase_test_autogen/mocs_compilation.cpp
[ 50%] Building CXX object test/CMakeFiles/ConnectivityBase_test.dir/ConnectivityBase_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/ConnectivityBase_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/ConnectivityBase_test.dir/ConnectivityBase_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ConnectivityBase_test.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/descriptor.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityBase.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ConnectivityBase_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/descriptor.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityBase.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ConnectivityBase_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/descriptor.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityBase.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ConnectivityBase_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/descriptor.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityBase.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ConnectivityBase_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/descriptor.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityBase.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ConnectivityBase_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/descriptor.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityBase.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ConnectivityBase_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 50%] Linking CXX executable ../bin/TEST/ConnectivityBase_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/ConnectivityBase_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/ConnectivityBase_test.dir/ConnectivityBase_test_autogen/mocs_compilation.cpp.o CMakeFiles/ConnectivityBase_test.dir/ConnectivityBase_test.C.o -o ../bin/TEST/ConnectivityBase_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 50%] Built target ConnectivityBase_test
make  -f test/CMakeFiles/AromaticityProcessor_test_autogen.dir/build.make test/CMakeFiles/AromaticityProcessor_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/AromaticityProcessor_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target AromaticityProcessor_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/AromaticityProcessor_test_autogen.dir/build.make test/CMakeFiles/AromaticityProcessor_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 50%] Automatic MOC for target AromaticityProcessor_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/AromaticityProcessor_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 50%] Built target AromaticityProcessor_test_autogen
make  -f test/CMakeFiles/AromaticityProcessor_test.dir/build.make test/CMakeFiles/AromaticityProcessor_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/AromaticityProcessor_test.dir/DependInfo.cmake --color=
Scanning dependencies of target AromaticityProcessor_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/AromaticityProcessor_test.dir/build.make test/CMakeFiles/AromaticityProcessor_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 50%] Building CXX object test/CMakeFiles/AromaticityProcessor_test.dir/AromaticityProcessor_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/AromaticityProcessor_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/AromaticityProcessor_test.dir/AromaticityProcessor_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/AromaticityProcessor_test_autogen/mocs_compilation.cpp
[ 50%] Building CXX object test/CMakeFiles/AromaticityProcessor_test.dir/AromaticityProcessor_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/AromaticityProcessor_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/AromaticityProcessor_test.dir/AromaticityProcessor_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AromaticityProcessor_test.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/aromaticityProcessor.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AromaticityProcessor_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/aromaticityProcessor.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AromaticityProcessor_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/aromaticityProcessor.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AromaticityProcessor_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/aromaticityProcessor.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AromaticityProcessor_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/aromaticityProcessor.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AromaticityProcessor_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/aromaticityProcessor.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AromaticityProcessor_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AromaticityProcessor_test.C: In function 'int main(int, char**)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AromaticityProcessor_test.C:62:30: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   62 |   a_it = molecule->beginAtom();
      |                              ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/aromaticityProcessor.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AromaticityProcessor_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AromaticityProcessor_test.C:15:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:108:49: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  108 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AromaticityProcessor_test.C:65:3: note: in expansion of macro 'BALL_FOREACH_BOND'
   65 |   BALL_FOREACH_BOND(*molecule, a_it, b_it)
      |   ^~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/aromaticityProcessor.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AromaticityProcessor_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AromaticityProcessor_test.C:15:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:110:51: warning: implicitly-declared 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  110 |   for (bond_iterator = (*atom_iterator).beginBond(); \
      |                                                   ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AromaticityProcessor_test.C:65:3: note: in expansion of macro 'BALL_FOREACH_BOND'
   65 |   BALL_FOREACH_BOND(*molecule, a_it, b_it)
      |   ^~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/aromaticityProcessor.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AromaticityProcessor_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:47:15: note: because 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   47 |   BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:24:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   24 |  class ConstRandomAccessIterator
      |        ^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/aromaticityProcessor.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AromaticityProcessor_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AromaticityProcessor_test.C:15:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AromaticityProcessor_test.C: In function 'int main(int, char**)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:110:51: note: synthesized method 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' first required here
  110 |   for (bond_iterator = (*atom_iterator).beginBond(); \
      |                                                   ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AromaticityProcessor_test.C:65:3: note: in expansion of macro 'BALL_FOREACH_BOND'
   65 |   BALL_FOREACH_BOND(*molecule, a_it, b_it)
      |   ^~~~~~~~~~~~~~~~~
[ 50%] Linking CXX executable ../bin/TEST/AromaticityProcessor_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/AromaticityProcessor_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/AromaticityProcessor_test.dir/AromaticityProcessor_test_autogen/mocs_compilation.cpp.o CMakeFiles/AromaticityProcessor_test.dir/AromaticityProcessor_test.C.o -o ../bin/TEST/AromaticityProcessor_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 50%] Built target AromaticityProcessor_test
make  -f test/CMakeFiles/PARSE_test_autogen.dir/build.make test/CMakeFiles/PARSE_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/PARSE_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target PARSE_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/PARSE_test_autogen.dir/build.make test/CMakeFiles/PARSE_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 50%] Automatic MOC for target PARSE_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/PARSE_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 50%] Built target PARSE_test_autogen
make  -f test/CMakeFiles/PARSE_test.dir/build.make test/CMakeFiles/PARSE_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/PARSE_test.dir/DependInfo.cmake --color=
Scanning dependencies of target PARSE_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/PARSE_test.dir/build.make test/CMakeFiles/PARSE_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 50%] Building CXX object test/CMakeFiles/PARSE_test.dir/PARSE_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/PARSE_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/PARSE_test.dir/PARSE_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/PARSE_test_autogen/mocs_compilation.cpp
[ 50%] Building CXX object test/CMakeFiles/PARSE_test.dir/PARSE_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/PARSE_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/PARSE_test.dir/PARSE_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/PARSE_test.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/secondaryStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBdefs.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/PARSE_test.C:12:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/PARSE_test.C:12:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/secondaryStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBdefs.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/PARSE_test.C:12:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/PARSE_test.C:12:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/secondaryStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBdefs.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/PARSE_test.C:12:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/PARSE_test.C:12:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/PARSE_test.C: In function 'int main(int, char**)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/PARSE_test.C:54:34: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   54 |  for (atom_it = system.beginAtom(), total_charge = 0.0f; +atom_it; ++atom_it)
      |                                  ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/PARSE_test.C:12:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/PARSE_test.C:62:34: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   62 |  for (atom_it = system.beginAtom(), ref_atom_it = ref_system.beginAtom();
      |                                  ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/PARSE_test.C:12:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/PARSE_test.C:62:72: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   62 |  for (atom_it = system.beginAtom(), ref_atom_it = ref_system.beginAtom();
      |                                                                        ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/PARSE_test.C:12:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/PARSE_test.C:79:34: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   79 |  for (atom_it = system.beginAtom(), total_charge = 0.0f; +atom_it; ++atom_it)
      |                                  ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/PARSE_test.C:12:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/PARSE_test.C:88:34: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   88 |  for (atom_it = system.beginAtom(), ref_atom_it = ref_system.beginAtom();
      |                                  ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/PARSE_test.C:12:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/PARSE_test.C:88:72: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   88 |  for (atom_it = system.beginAtom(), ref_atom_it = ref_system.beginAtom();
      |                                                                        ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/PARSE_test.C:12:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/PARSE_test.C:105:34: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  105 |  for (atom_it = system.beginAtom(), total_charge = 0.0f; +atom_it; ++atom_it)
      |                                  ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/PARSE_test.C:12:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/PARSE_test.C:114:34: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  114 |  for (atom_it = system.beginAtom(), ref_atom_it = ref_system.beginAtom();
      |                                  ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/PARSE_test.C:12:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/PARSE_test.C:114:72: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  114 |  for (atom_it = system.beginAtom(), ref_atom_it = ref_system.beginAtom();
      |                                                                        ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/PARSE_test.C:12:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/PARSE_test.C:131:34: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  131 |  for (atom_it = system.beginAtom(), total_charge = 0.0f; +atom_it; ++atom_it)
      |                                  ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/PARSE_test.C:12:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/PARSE_test.C:140:34: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  140 |  for (atom_it = system.beginAtom(), ref_atom_it = ref_system.beginAtom();
      |                                  ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/PARSE_test.C:12:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/PARSE_test.C:140:72: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  140 |  for (atom_it = system.beginAtom(), ref_atom_it = ref_system.beginAtom();
      |                                                                        ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/PARSE_test.C:12:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/PARSE_test.C:158:34: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  158 |  for (atom_it = system.beginAtom(), total_charge = 0.0f; +atom_it; ++atom_it)
      |                                  ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/PARSE_test.C:12:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/PARSE_test.C:167:34: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  167 |  for (atom_it = system.beginAtom(), ref_atom_it = ref_system.beginAtom();
      |                                  ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/PARSE_test.C:12:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/PARSE_test.C:167:72: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  167 |  for (atom_it = system.beginAtom(), ref_atom_it = ref_system.beginAtom();
      |                                                                        ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/PARSE_test.C:12:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
[ 50%] Linking CXX executable ../bin/TEST/PARSE_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/PARSE_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/PARSE_test.dir/PARSE_test_autogen/mocs_compilation.cpp.o CMakeFiles/PARSE_test.dir/PARSE_test.C.o -o ../bin/TEST/PARSE_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 50%] Built target PARSE_test
make  -f test/CMakeFiles/PairExpRDFIntegrator_test_autogen.dir/build.make test/CMakeFiles/PairExpRDFIntegrator_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/PairExpRDFIntegrator_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target PairExpRDFIntegrator_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/PairExpRDFIntegrator_test_autogen.dir/build.make test/CMakeFiles/PairExpRDFIntegrator_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 50%] Automatic MOC for target PairExpRDFIntegrator_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/PairExpRDFIntegrator_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 50%] Built target PairExpRDFIntegrator_test_autogen
make  -f test/CMakeFiles/PairExpRDFIntegrator_test.dir/build.make test/CMakeFiles/PairExpRDFIntegrator_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/PairExpRDFIntegrator_test.dir/DependInfo.cmake --color=
Scanning dependencies of target PairExpRDFIntegrator_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/PairExpRDFIntegrator_test.dir/build.make test/CMakeFiles/PairExpRDFIntegrator_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 50%] Building CXX object test/CMakeFiles/PairExpRDFIntegrator_test.dir/PairExpRDFIntegrator_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/PairExpRDFIntegrator_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/PairExpRDFIntegrator_test.dir/PairExpRDFIntegrator_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/PairExpRDFIntegrator_test_autogen/mocs_compilation.cpp
[ 50%] Building CXX object test/CMakeFiles/PairExpRDFIntegrator_test.dir/PairExpRDFIntegrator_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/PairExpRDFIntegrator_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/PairExpRDFIntegrator_test.dir/PairExpRDFIntegrator_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/PairExpRDFIntegrator_test.C
[ 50%] Linking CXX executable ../bin/TEST/PairExpRDFIntegrator_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/PairExpRDFIntegrator_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/PairExpRDFIntegrator_test.dir/PairExpRDFIntegrator_test_autogen/mocs_compilation.cpp.o CMakeFiles/PairExpRDFIntegrator_test.dir/PairExpRDFIntegrator_test.C.o -o ../bin/TEST/PairExpRDFIntegrator_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 50%] Built target PairExpRDFIntegrator_test
make  -f test/CMakeFiles/PairExpInteractionEnergyProcessor_test_autogen.dir/build.make test/CMakeFiles/PairExpInteractionEnergyProcessor_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/PairExpInteractionEnergyProcessor_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target PairExpInteractionEnergyProcessor_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/PairExpInteractionEnergyProcessor_test_autogen.dir/build.make test/CMakeFiles/PairExpInteractionEnergyProcessor_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 50%] Automatic MOC for target PairExpInteractionEnergyProcessor_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/PairExpInteractionEnergyProcessor_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 50%] Built target PairExpInteractionEnergyProcessor_test_autogen
make  -f test/CMakeFiles/PairExpInteractionEnergyProcessor_test.dir/build.make test/CMakeFiles/PairExpInteractionEnergyProcessor_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/PairExpInteractionEnergyProcessor_test.dir/DependInfo.cmake --color=
Scanning dependencies of target PairExpInteractionEnergyProcessor_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/PairExpInteractionEnergyProcessor_test.dir/build.make test/CMakeFiles/PairExpInteractionEnergyProcessor_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 50%] Building CXX object test/CMakeFiles/PairExpInteractionEnergyProcessor_test.dir/PairExpInteractionEnergyProcessor_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/PairExpInteractionEnergyProcessor_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/PairExpInteractionEnergyProcessor_test.dir/PairExpInteractionEnergyProcessor_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/PairExpInteractionEnergyProcessor_test_autogen/mocs_compilation.cpp
[ 50%] Building CXX object test/CMakeFiles/PairExpInteractionEnergyProcessor_test.dir/PairExpInteractionEnergyProcessor_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/PairExpInteractionEnergyProcessor_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/PairExpInteractionEnergyProcessor_test.dir/PairExpInteractionEnergyProcessor_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/PairExpInteractionEnergyProcessor_test.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/ENERGY/energyProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SOLVATION/pairExpInteractionEnergyProcessor.h:27,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/PairExpInteractionEnergyProcessor_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SOLVATION/pairExpInteractionEnergyProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/PairExpInteractionEnergyProcessor_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/ENERGY/energyProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SOLVATION/pairExpInteractionEnergyProcessor.h:27,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/PairExpInteractionEnergyProcessor_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SOLVATION/pairExpInteractionEnergyProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/PairExpInteractionEnergyProcessor_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/ENERGY/energyProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SOLVATION/pairExpInteractionEnergyProcessor.h:27,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/PairExpInteractionEnergyProcessor_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SOLVATION/pairExpInteractionEnergyProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/PairExpInteractionEnergyProcessor_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 50%] Linking CXX executable ../bin/TEST/PairExpInteractionEnergyProcessor_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/PairExpInteractionEnergyProcessor_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/PairExpInteractionEnergyProcessor_test.dir/PairExpInteractionEnergyProcessor_test_autogen/mocs_compilation.cpp.o CMakeFiles/PairExpInteractionEnergyProcessor_test.dir/PairExpInteractionEnergyProcessor_test.C.o -o ../bin/TEST/PairExpInteractionEnergyProcessor_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 50%] Built target PairExpInteractionEnergyProcessor_test
make  -f test/CMakeFiles/Pair6_12RDFIntegrator_test_autogen.dir/build.make test/CMakeFiles/Pair6_12RDFIntegrator_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/Pair6_12RDFIntegrator_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target Pair6_12RDFIntegrator_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/Pair6_12RDFIntegrator_test_autogen.dir/build.make test/CMakeFiles/Pair6_12RDFIntegrator_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 51%] Automatic MOC for target Pair6_12RDFIntegrator_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/Pair6_12RDFIntegrator_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 51%] Built target Pair6_12RDFIntegrator_test_autogen
make  -f test/CMakeFiles/Pair6_12RDFIntegrator_test.dir/build.make test/CMakeFiles/Pair6_12RDFIntegrator_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/Pair6_12RDFIntegrator_test.dir/DependInfo.cmake --color=
Scanning dependencies of target Pair6_12RDFIntegrator_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/Pair6_12RDFIntegrator_test.dir/build.make test/CMakeFiles/Pair6_12RDFIntegrator_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 51%] Building CXX object test/CMakeFiles/Pair6_12RDFIntegrator_test.dir/Pair6_12RDFIntegrator_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/Pair6_12RDFIntegrator_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Pair6_12RDFIntegrator_test.dir/Pair6_12RDFIntegrator_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/Pair6_12RDFIntegrator_test_autogen/mocs_compilation.cpp
[ 51%] Building CXX object test/CMakeFiles/Pair6_12RDFIntegrator_test.dir/Pair6_12RDFIntegrator_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/Pair6_12RDFIntegrator_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Pair6_12RDFIntegrator_test.dir/Pair6_12RDFIntegrator_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Pair6_12RDFIntegrator_test.C
[ 51%] Linking CXX executable ../bin/TEST/Pair6_12RDFIntegrator_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/Pair6_12RDFIntegrator_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Pair6_12RDFIntegrator_test.dir/Pair6_12RDFIntegrator_test_autogen/mocs_compilation.cpp.o CMakeFiles/Pair6_12RDFIntegrator_test.dir/Pair6_12RDFIntegrator_test.C.o -o ../bin/TEST/Pair6_12RDFIntegrator_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 51%] Built target Pair6_12RDFIntegrator_test
make  -f test/CMakeFiles/PierottiCavFreeEnergyProcessor_test_autogen.dir/build.make test/CMakeFiles/PierottiCavFreeEnergyProcessor_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/PierottiCavFreeEnergyProcessor_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target PierottiCavFreeEnergyProcessor_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/PierottiCavFreeEnergyProcessor_test_autogen.dir/build.make test/CMakeFiles/PierottiCavFreeEnergyProcessor_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 51%] Automatic MOC for target PierottiCavFreeEnergyProcessor_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/PierottiCavFreeEnergyProcessor_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 51%] Built target PierottiCavFreeEnergyProcessor_test_autogen
make  -f test/CMakeFiles/PierottiCavFreeEnergyProcessor_test.dir/build.make test/CMakeFiles/PierottiCavFreeEnergyProcessor_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/PierottiCavFreeEnergyProcessor_test.dir/DependInfo.cmake --color=
Scanning dependencies of target PierottiCavFreeEnergyProcessor_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/PierottiCavFreeEnergyProcessor_test.dir/build.make test/CMakeFiles/PierottiCavFreeEnergyProcessor_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 51%] Building CXX object test/CMakeFiles/PierottiCavFreeEnergyProcessor_test.dir/PierottiCavFreeEnergyProcessor_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/PierottiCavFreeEnergyProcessor_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/PierottiCavFreeEnergyProcessor_test.dir/PierottiCavFreeEnergyProcessor_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/PierottiCavFreeEnergyProcessor_test_autogen/mocs_compilation.cpp
[ 51%] Building CXX object test/CMakeFiles/PierottiCavFreeEnergyProcessor_test.dir/PierottiCavFreeEnergyProcessor_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/PierottiCavFreeEnergyProcessor_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/PierottiCavFreeEnergyProcessor_test.dir/PierottiCavFreeEnergyProcessor_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/PierottiCavFreeEnergyProcessor_test.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/ENERGY/energyProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SOLVATION/pierottiCavFreeEnergyProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/PierottiCavFreeEnergyProcessor_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/ENERGY/energyProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SOLVATION/pierottiCavFreeEnergyProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/PierottiCavFreeEnergyProcessor_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/ENERGY/energyProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SOLVATION/pierottiCavFreeEnergyProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/PierottiCavFreeEnergyProcessor_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/ENERGY/energyProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SOLVATION/pierottiCavFreeEnergyProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/PierottiCavFreeEnergyProcessor_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/ENERGY/energyProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SOLVATION/pierottiCavFreeEnergyProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/PierottiCavFreeEnergyProcessor_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/ENERGY/energyProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SOLVATION/pierottiCavFreeEnergyProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/PierottiCavFreeEnergyProcessor_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 51%] Linking CXX executable ../bin/TEST/PierottiCavFreeEnergyProcessor_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/PierottiCavFreeEnergyProcessor_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/PierottiCavFreeEnergyProcessor_test.dir/PierottiCavFreeEnergyProcessor_test_autogen/mocs_compilation.cpp.o CMakeFiles/PierottiCavFreeEnergyProcessor_test.dir/PierottiCavFreeEnergyProcessor_test.C.o -o ../bin/TEST/PierottiCavFreeEnergyProcessor_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 51%] Built target PierottiCavFreeEnergyProcessor_test
make  -f test/CMakeFiles/Expression_test_autogen.dir/build.make test/CMakeFiles/Expression_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/Expression_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target Expression_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/Expression_test_autogen.dir/build.make test/CMakeFiles/Expression_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 51%] Automatic MOC for target Expression_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/Expression_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 51%] Built target Expression_test_autogen
make  -f test/CMakeFiles/Expression_test.dir/build.make test/CMakeFiles/Expression_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/Expression_test.dir/DependInfo.cmake --color=
Scanning dependencies of target Expression_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/Expression_test.dir/build.make test/CMakeFiles/Expression_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 51%] Building CXX object test/CMakeFiles/Expression_test.dir/Expression_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/Expression_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Expression_test.dir/Expression_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/Expression_test_autogen/mocs_compilation.cpp
[ 51%] Building CXX object test/CMakeFiles/Expression_test.dir/Expression_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/Expression_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Expression_test.dir/Expression_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Expression_test.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/standardPredicates.h:19,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Expression_test.C:13:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Expression_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/standardPredicates.h:19,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Expression_test.C:13:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Expression_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/standardPredicates.h:19,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Expression_test.C:13:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Expression_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 51%] Linking CXX executable ../bin/TEST/Expression_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/Expression_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Expression_test.dir/Expression_test_autogen/mocs_compilation.cpp.o CMakeFiles/Expression_test.dir/Expression_test.C.o -o ../bin/TEST/Expression_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 51%] Built target Expression_test
make  -f test/CMakeFiles/Residue_test2_autogen.dir/build.make test/CMakeFiles/Residue_test2_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/Residue_test2_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target Residue_test2_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/Residue_test2_autogen.dir/build.make test/CMakeFiles/Residue_test2_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 51%] Automatic MOC for target Residue_test2
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/Residue_test2_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 51%] Built target Residue_test2_autogen
make  -f test/CMakeFiles/Residue_test2.dir/build.make test/CMakeFiles/Residue_test2.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/Residue_test2.dir/DependInfo.cmake --color=
Scanning dependencies of target Residue_test2
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/Residue_test2.dir/build.make test/CMakeFiles/Residue_test2.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 51%] Building CXX object test/CMakeFiles/Residue_test2.dir/Residue_test2_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/Residue_test2_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Residue_test2.dir/Residue_test2_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/Residue_test2_autogen/mocs_compilation.cpp
[ 51%] Building CXX object test/CMakeFiles/Residue_test2.dir/Residue_test2.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/Residue_test2_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Residue_test2.dir/Residue_test2.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Residue_test2.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Residue_test2.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Residue_test2.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Residue_test2.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Residue_test2.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Residue_test2.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Residue_test2.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 51%] Linking CXX executable ../bin/TEST/Residue_test2
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/Residue_test2.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Residue_test2.dir/Residue_test2_autogen/mocs_compilation.cpp.o CMakeFiles/Residue_test2.dir/Residue_test2.C.o -o ../bin/TEST/Residue_test2  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 51%] Built target Residue_test2
make  -f test/CMakeFiles/Residue_test1_autogen.dir/build.make test/CMakeFiles/Residue_test1_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/Residue_test1_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target Residue_test1_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/Residue_test1_autogen.dir/build.make test/CMakeFiles/Residue_test1_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 51%] Automatic MOC for target Residue_test1
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/Residue_test1_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 51%] Built target Residue_test1_autogen
make  -f test/CMakeFiles/Residue_test1.dir/build.make test/CMakeFiles/Residue_test1.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/Residue_test1.dir/DependInfo.cmake --color=
Scanning dependencies of target Residue_test1
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/Residue_test1.dir/build.make test/CMakeFiles/Residue_test1.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 51%] Building CXX object test/CMakeFiles/Residue_test1.dir/Residue_test1_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/Residue_test1_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Residue_test1.dir/Residue_test1_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/Residue_test1_autogen/mocs_compilation.cpp
[ 51%] Building CXX object test/CMakeFiles/Residue_test1.dir/Residue_test1.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/Residue_test1_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Residue_test1.dir/Residue_test1.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Residue_test1.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Residue_test1.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Residue_test1.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Residue_test1.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Residue_test1.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Residue_test1.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Residue_test1.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 51%] Linking CXX executable ../bin/TEST/Residue_test1
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/Residue_test1.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Residue_test1.dir/Residue_test1_autogen/mocs_compilation.cpp.o CMakeFiles/Residue_test1.dir/Residue_test1.C.o -o ../bin/TEST/Residue_test1  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 51%] Built target Residue_test1
make  -f test/CMakeFiles/Nucleotide_test_autogen.dir/build.make test/CMakeFiles/Nucleotide_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/Nucleotide_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target Nucleotide_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/Nucleotide_test_autogen.dir/build.make test/CMakeFiles/Nucleotide_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 51%] Automatic MOC for target Nucleotide_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/Nucleotide_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 51%] Built target Nucleotide_test_autogen
make  -f test/CMakeFiles/Nucleotide_test.dir/build.make test/CMakeFiles/Nucleotide_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/Nucleotide_test.dir/DependInfo.cmake --color=
Scanning dependencies of target Nucleotide_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/Nucleotide_test.dir/build.make test/CMakeFiles/Nucleotide_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 51%] Building CXX object test/CMakeFiles/Nucleotide_test.dir/Nucleotide_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/Nucleotide_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Nucleotide_test.dir/Nucleotide_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/Nucleotide_test_autogen/mocs_compilation.cpp
[ 51%] Building CXX object test/CMakeFiles/Nucleotide_test.dir/Nucleotide_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/Nucleotide_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Nucleotide_test.dir/Nucleotide_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Nucleotide_test.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/nucleotide.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Nucleotide_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/nucleotide.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Nucleotide_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/nucleotide.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Nucleotide_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/nucleotide.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Nucleotide_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/nucleotide.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Nucleotide_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/nucleotide.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Nucleotide_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 51%] Linking CXX executable ../bin/TEST/Nucleotide_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/Nucleotide_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Nucleotide_test.dir/Nucleotide_test_autogen/mocs_compilation.cpp.o CMakeFiles/Nucleotide_test.dir/Nucleotide_test.C.o -o ../bin/TEST/Nucleotide_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 51%] Built target Nucleotide_test
make  -f test/CMakeFiles/StringHashMap_test_autogen.dir/build.make test/CMakeFiles/StringHashMap_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/StringHashMap_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target StringHashMap_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/StringHashMap_test_autogen.dir/build.make test/CMakeFiles/StringHashMap_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 51%] Automatic MOC for target StringHashMap_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/StringHashMap_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 51%] Built target StringHashMap_test_autogen
make  -f test/CMakeFiles/StringHashMap_test.dir/build.make test/CMakeFiles/StringHashMap_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/StringHashMap_test.dir/DependInfo.cmake --color=
Scanning dependencies of target StringHashMap_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/StringHashMap_test.dir/build.make test/CMakeFiles/StringHashMap_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 51%] Building CXX object test/CMakeFiles/StringHashMap_test.dir/StringHashMap_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/StringHashMap_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/StringHashMap_test.dir/StringHashMap_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/StringHashMap_test_autogen/mocs_compilation.cpp
[ 51%] Building CXX object test/CMakeFiles/StringHashMap_test.dir/StringHashMap_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/StringHashMap_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/StringHashMap_test.dir/StringHashMap_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/StringHashMap_test.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ItemCollector.h:6,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/StringHashMap_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ItemCollector.h:6,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/StringHashMap_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ItemCollector.h:6,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/StringHashMap_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ItemCollector.h:6,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/StringHashMap_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ItemCollector.h:6,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/StringHashMap_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ItemCollector.h:6,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/StringHashMap_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 51%] Linking CXX executable ../bin/TEST/StringHashMap_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/StringHashMap_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/StringHashMap_test.dir/StringHashMap_test_autogen/mocs_compilation.cpp.o CMakeFiles/StringHashMap_test.dir/StringHashMap_test.C.o -o ../bin/TEST/StringHashMap_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 51%] Built target StringHashMap_test
make  -f test/CMakeFiles/PDBAtom_test_autogen.dir/build.make test/CMakeFiles/PDBAtom_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/PDBAtom_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target PDBAtom_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/PDBAtom_test_autogen.dir/build.make test/CMakeFiles/PDBAtom_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 51%] Automatic MOC for target PDBAtom_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/PDBAtom_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 51%] Built target PDBAtom_test_autogen
make  -f test/CMakeFiles/PDBAtom_test.dir/build.make test/CMakeFiles/PDBAtom_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/PDBAtom_test.dir/DependInfo.cmake --color=
Scanning dependencies of target PDBAtom_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/PDBAtom_test.dir/build.make test/CMakeFiles/PDBAtom_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 52%] Building CXX object test/CMakeFiles/PDBAtom_test.dir/PDBAtom_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/PDBAtom_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/PDBAtom_test.dir/PDBAtom_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/PDBAtom_test_autogen/mocs_compilation.cpp
[ 52%] Building CXX object test/CMakeFiles/PDBAtom_test.dir/PDBAtom_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/PDBAtom_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/PDBAtom_test.dir/PDBAtom_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/PDBAtom_test.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chain.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/PDBAtom_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/PDBAtom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/PDBAtom_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chain.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/PDBAtom_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/PDBAtom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/PDBAtom_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chain.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/PDBAtom_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/PDBAtom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/PDBAtom_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 52%] Linking CXX executable ../bin/TEST/PDBAtom_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/PDBAtom_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/PDBAtom_test.dir/PDBAtom_test_autogen/mocs_compilation.cpp.o CMakeFiles/PDBAtom_test.dir/PDBAtom_test.C.o -o ../bin/TEST/PDBAtom_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 52%] Built target PDBAtom_test
make  -f test/CMakeFiles/File_test2_autogen.dir/build.make test/CMakeFiles/File_test2_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/File_test2_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target File_test2_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/File_test2_autogen.dir/build.make test/CMakeFiles/File_test2_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 52%] Automatic MOC for target File_test2
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/File_test2_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 52%] Built target File_test2_autogen
make  -f test/CMakeFiles/File_test2.dir/build.make test/CMakeFiles/File_test2.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/File_test2.dir/DependInfo.cmake --color=
Scanning dependencies of target File_test2
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/File_test2.dir/build.make test/CMakeFiles/File_test2.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 52%] Building CXX object test/CMakeFiles/File_test2.dir/File_test2_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/File_test2_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/File_test2.dir/File_test2_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/File_test2_autogen/mocs_compilation.cpp
[ 52%] Building CXX object test/CMakeFiles/File_test2.dir/File_test2.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/File_test2_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/File_test2.dir/File_test2.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/File_test2.C
[ 52%] Linking CXX executable ../bin/TEST/File_test2
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/File_test2.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/File_test2.dir/File_test2_autogen/mocs_compilation.cpp.o CMakeFiles/File_test2.dir/File_test2.C.o -o ../bin/TEST/File_test2  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 52%] Built target File_test2
make  -f test/CMakeFiles/AtomContainer_test2_autogen.dir/build.make test/CMakeFiles/AtomContainer_test2_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/AtomContainer_test2_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target AtomContainer_test2_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/AtomContainer_test2_autogen.dir/build.make test/CMakeFiles/AtomContainer_test2_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 52%] Automatic MOC for target AtomContainer_test2
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/AtomContainer_test2_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 52%] Built target AtomContainer_test2_autogen
make  -f test/CMakeFiles/AtomContainer_test2.dir/build.make test/CMakeFiles/AtomContainer_test2.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/AtomContainer_test2.dir/DependInfo.cmake --color=
Scanning dependencies of target AtomContainer_test2
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/AtomContainer_test2.dir/build.make test/CMakeFiles/AtomContainer_test2.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 52%] Building CXX object test/CMakeFiles/AtomContainer_test2.dir/AtomContainer_test2_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/AtomContainer_test2_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/AtomContainer_test2.dir/AtomContainer_test2_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/AtomContainer_test2_autogen/mocs_compilation.cpp
[ 52%] Building CXX object test/CMakeFiles/AtomContainer_test2.dir/AtomContainer_test2.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/AtomContainer_test2_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/AtomContainer_test2.dir/AtomContainer_test2.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AtomContainer_test2.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AtomContainer_test2.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AtomContainer_test2.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AtomContainer_test2.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AtomContainer_test2.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AtomContainer_test2.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AtomContainer_test2.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 52%] Linking CXX executable ../bin/TEST/AtomContainer_test2
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/AtomContainer_test2.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/AtomContainer_test2.dir/AtomContainer_test2_autogen/mocs_compilation.cpp.o CMakeFiles/AtomContainer_test2.dir/AtomContainer_test2.C.o -o ../bin/TEST/AtomContainer_test2  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 52%] Built target AtomContainer_test2
make  -f test/CMakeFiles/Peptides_test_autogen.dir/build.make test/CMakeFiles/Peptides_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/Peptides_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target Peptides_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/Peptides_test_autogen.dir/build.make test/CMakeFiles/Peptides_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 52%] Automatic MOC for target Peptides_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/Peptides_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 52%] Built target Peptides_test_autogen
make  -f test/CMakeFiles/Peptides_test.dir/build.make test/CMakeFiles/Peptides_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/Peptides_test.dir/DependInfo.cmake --color=
Scanning dependencies of target Peptides_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/Peptides_test.dir/build.make test/CMakeFiles/Peptides_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 52%] Building CXX object test/CMakeFiles/Peptides_test.dir/Peptides_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/Peptides_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Peptides_test.dir/Peptides_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/Peptides_test_autogen/mocs_compilation.cpp
[ 52%] Building CXX object test/CMakeFiles/Peptides_test.dir/Peptides_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/Peptides_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Peptides_test.dir/Peptides_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Peptides_test.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chain.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chainIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/protein.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/peptides.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Peptides_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chain.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chainIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/protein.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/peptides.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Peptides_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chain.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chainIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/protein.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/peptides.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Peptides_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chain.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chainIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/protein.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/peptides.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Peptides_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chain.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chainIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/protein.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/peptides.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Peptides_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chain.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chainIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/protein.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/peptides.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Peptides_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 52%] Linking CXX executable ../bin/TEST/Peptides_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/Peptides_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Peptides_test.dir/Peptides_test_autogen/mocs_compilation.cpp.o CMakeFiles/Peptides_test.dir/Peptides_test.C.o -o ../bin/TEST/Peptides_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 52%] Built target Peptides_test
make  -f test/CMakeFiles/MLRModel_test_autogen.dir/build.make test/CMakeFiles/MLRModel_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/MLRModel_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target MLRModel_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/MLRModel_test_autogen.dir/build.make test/CMakeFiles/MLRModel_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 52%] Automatic MOC for target MLRModel_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/MLRModel_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 52%] Built target MLRModel_test_autogen
make  -f test/CMakeFiles/MLRModel_test.dir/build.make test/CMakeFiles/MLRModel_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/MLRModel_test.dir/DependInfo.cmake --color=
Scanning dependencies of target MLRModel_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/MLRModel_test.dir/build.make test/CMakeFiles/MLRModel_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 52%] Building CXX object test/CMakeFiles/MLRModel_test.dir/MLRModel_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/MLRModel_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/MLRModel_test.dir/MLRModel_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/MLRModel_test_autogen/mocs_compilation.cpp
[ 52%] Building CXX object test/CMakeFiles/MLRModel_test.dir/MLRModel_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/MLRModel_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/MLRModel_test.dir/MLRModel_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/MLRModel_test.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/MLRModel_test.C:4:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/MLRModel_test.C:4:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/MLRModel_test.C:4:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/MLRModel_test.C:4:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/MLRModel_test.C:4:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/MLRModel_test.C:4:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 52%] Linking CXX executable ../bin/TEST/MLRModel_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/MLRModel_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/MLRModel_test.dir/MLRModel_test_autogen/mocs_compilation.cpp.o CMakeFiles/MLRModel_test.dir/MLRModel_test.C.o -o ../bin/TEST/MLRModel_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 52%] Built target MLRModel_test
make  -f test/CMakeFiles/Bond_test_autogen.dir/build.make test/CMakeFiles/Bond_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/Bond_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target Bond_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/Bond_test_autogen.dir/build.make test/CMakeFiles/Bond_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 52%] Automatic MOC for target Bond_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/Bond_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 52%] Built target Bond_test_autogen
make  -f test/CMakeFiles/Bond_test.dir/build.make test/CMakeFiles/Bond_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/Bond_test.dir/DependInfo.cmake --color=
Scanning dependencies of target Bond_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/Bond_test.dir/build.make test/CMakeFiles/Bond_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 52%] Building CXX object test/CMakeFiles/Bond_test.dir/Bond_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/Bond_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Bond_test.dir/Bond_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/Bond_test_autogen/mocs_compilation.cpp
[ 52%] Building CXX object test/CMakeFiles/Bond_test.dir/Bond_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/Bond_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Bond_test.dir/Bond_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Bond_test.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Bond_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Bond_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Bond_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Bond_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Bond_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Bond_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 52%] Linking CXX executable ../bin/TEST/Bond_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/Bond_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Bond_test.dir/Bond_test_autogen/mocs_compilation.cpp.o CMakeFiles/Bond_test.dir/Bond_test.C.o -o ../bin/TEST/Bond_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 52%] Built target Bond_test
make  -f test/CMakeFiles/HashSet_test2_autogen.dir/build.make test/CMakeFiles/HashSet_test2_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/HashSet_test2_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target HashSet_test2_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/HashSet_test2_autogen.dir/build.make test/CMakeFiles/HashSet_test2_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 52%] Automatic MOC for target HashSet_test2
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/HashSet_test2_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 52%] Built target HashSet_test2_autogen
make  -f test/CMakeFiles/HashSet_test2.dir/build.make test/CMakeFiles/HashSet_test2.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/HashSet_test2.dir/DependInfo.cmake --color=
Scanning dependencies of target HashSet_test2
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/HashSet_test2.dir/build.make test/CMakeFiles/HashSet_test2.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 52%] Building CXX object test/CMakeFiles/HashSet_test2.dir/HashSet_test2_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/HashSet_test2_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/HashSet_test2.dir/HashSet_test2_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/HashSet_test2_autogen/mocs_compilation.cpp
[ 52%] Building CXX object test/CMakeFiles/HashSet_test2.dir/HashSet_test2.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/HashSet_test2_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/HashSet_test2.dir/HashSet_test2.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/HashSet_test2.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ItemCollector.h:6,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/HashSet_test2.C:16:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ItemCollector.h:6,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/HashSet_test2.C:16:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ItemCollector.h:6,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/HashSet_test2.C:16:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ItemCollector.h:6,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/HashSet_test2.C:16:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ItemCollector.h:6,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/HashSet_test2.C:16:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ItemCollector.h:6,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/HashSet_test2.C:16:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 52%] Linking CXX executable ../bin/TEST/HashSet_test2
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/HashSet_test2.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/HashSet_test2.dir/HashSet_test2_autogen/mocs_compilation.cpp.o CMakeFiles/HashSet_test2.dir/HashSet_test2.C.o -o ../bin/TEST/HashSet_test2  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 52%] Built target HashSet_test2
make  -f test/CMakeFiles/SmilesParser_test_autogen.dir/build.make test/CMakeFiles/SmilesParser_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/SmilesParser_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target SmilesParser_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/SmilesParser_test_autogen.dir/build.make test/CMakeFiles/SmilesParser_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 52%] Automatic MOC for target SmilesParser_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/SmilesParser_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 52%] Built target SmilesParser_test_autogen
make  -f test/CMakeFiles/SmilesParser_test.dir/build.make test/CMakeFiles/SmilesParser_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/SmilesParser_test.dir/DependInfo.cmake --color=
Scanning dependencies of target SmilesParser_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/SmilesParser_test.dir/build.make test/CMakeFiles/SmilesParser_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 52%] Building CXX object test/CMakeFiles/SmilesParser_test.dir/SmilesParser_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/SmilesParser_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/SmilesParser_test.dir/SmilesParser_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/SmilesParser_test_autogen/mocs_compilation.cpp
[ 52%] Building CXX object test/CMakeFiles/SmilesParser_test.dir/SmilesParser_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/SmilesParser_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/SmilesParser_test.dir/SmilesParser_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/SmilesParser_test.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/smilesParser.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/SmilesParser_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/smilesParser.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/SmilesParser_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/smilesParser.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/SmilesParser_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/smilesParser.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/SmilesParser_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/smilesParser.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/SmilesParser_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/smilesParser.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/SmilesParser_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 52%] Linking CXX executable ../bin/TEST/SmilesParser_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/SmilesParser_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/SmilesParser_test.dir/SmilesParser_test_autogen/mocs_compilation.cpp.o CMakeFiles/SmilesParser_test.dir/SmilesParser_test.C.o -o ../bin/TEST/SmilesParser_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 52%] Built target SmilesParser_test
make  -f test/CMakeFiles/PTE_test_autogen.dir/build.make test/CMakeFiles/PTE_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/PTE_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target PTE_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/PTE_test_autogen.dir/build.make test/CMakeFiles/PTE_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 52%] Automatic MOC for target PTE_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/PTE_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 52%] Built target PTE_test_autogen
make  -f test/CMakeFiles/PTE_test.dir/build.make test/CMakeFiles/PTE_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/PTE_test.dir/DependInfo.cmake --color=
Scanning dependencies of target PTE_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/PTE_test.dir/build.make test/CMakeFiles/PTE_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 52%] Building CXX object test/CMakeFiles/PTE_test.dir/PTE_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/PTE_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/PTE_test.dir/PTE_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/PTE_test_autogen/mocs_compilation.cpp
[ 52%] Building CXX object test/CMakeFiles/PTE_test.dir/PTE_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/PTE_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/PTE_test.dir/PTE_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/PTE_test.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ItemCollector.h:6,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/PTE_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ItemCollector.h:6,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/PTE_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ItemCollector.h:6,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/PTE_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ItemCollector.h:6,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/PTE_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ItemCollector.h:6,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/PTE_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ItemCollector.h:6,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/PTE_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 52%] Linking CXX executable ../bin/TEST/PTE_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/PTE_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/PTE_test.dir/PTE_test_autogen/mocs_compilation.cpp.o CMakeFiles/PTE_test.dir/PTE_test.C.o -o ../bin/TEST/PTE_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 52%] Built target PTE_test
make  -f test/CMakeFiles/PreciseTime_test_autogen.dir/build.make test/CMakeFiles/PreciseTime_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/PreciseTime_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target PreciseTime_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/PreciseTime_test_autogen.dir/build.make test/CMakeFiles/PreciseTime_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 52%] Automatic MOC for target PreciseTime_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/PreciseTime_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 52%] Built target PreciseTime_test_autogen
make  -f test/CMakeFiles/PreciseTime_test.dir/build.make test/CMakeFiles/PreciseTime_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/PreciseTime_test.dir/DependInfo.cmake --color=
Scanning dependencies of target PreciseTime_test
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make  -f test/CMakeFiles/PreciseTime_test.dir/build.make test/CMakeFiles/PreciseTime_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 52%] Building CXX object test/CMakeFiles/PreciseTime_test.dir/PreciseTime_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/PreciseTime_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/PreciseTime_test.dir/PreciseTime_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/PreciseTime_test_autogen/mocs_compilation.cpp
[ 52%] Building CXX object test/CMakeFiles/PreciseTime_test.dir/PreciseTime_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/PreciseTime_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/PreciseTime_test.dir/PreciseTime_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/PreciseTime_test.C
[ 52%] Linking CXX executable ../bin/TEST/PreciseTime_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/PreciseTime_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/PreciseTime_test.dir/PreciseTime_test_autogen/mocs_compilation.cpp.o CMakeFiles/PreciseTime_test.dir/PreciseTime_test.C.o -o ../bin/TEST/PreciseTime_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 52%] Built target PreciseTime_test
make  -f test/CMakeFiles/ScoringFunction_test_autogen.dir/build.make test/CMakeFiles/ScoringFunction_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/ScoringFunction_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target ScoringFunction_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/ScoringFunction_test_autogen.dir/build.make test/CMakeFiles/ScoringFunction_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 52%] Automatic MOC for target ScoringFunction_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/ScoringFunction_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 52%] Built target ScoringFunction_test_autogen
make  -f test/CMakeFiles/ScoringFunction_test.dir/build.make test/CMakeFiles/ScoringFunction_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/ScoringFunction_test.dir/DependInfo.cmake --color=
Scanning dependencies of target ScoringFunction_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/ScoringFunction_test.dir/build.make test/CMakeFiles/ScoringFunction_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 52%] Building CXX object test/CMakeFiles/ScoringFunction_test.dir/ScoringFunction_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/ScoringFunction_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/ScoringFunction_test.dir/ScoringFunction_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/ScoringFunction_test_autogen/mocs_compilation.cpp
[ 52%] Building CXX object test/CMakeFiles/ScoringFunction_test.dir/ScoringFunction_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/ScoringFunction_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/ScoringFunction_test.dir/ScoringFunction_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ScoringFunction_test.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/gridBasedScoring.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ScoringFunction_test.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/gridBasedScoring.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ScoringFunction_test.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/gridBasedScoring.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ScoringFunction_test.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/gridBasedScoring.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ScoringFunction_test.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/gridBasedScoring.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ScoringFunction_test.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/gridBasedScoring.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ScoringFunction_test.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 52%] Linking CXX executable ../bin/TEST/ScoringFunction_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/ScoringFunction_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/ScoringFunction_test.dir/ScoringFunction_test_autogen/mocs_compilation.cpp.o CMakeFiles/ScoringFunction_test.dir/ScoringFunction_test.C.o -o ../bin/TEST/ScoringFunction_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 52%] Built target ScoringFunction_test
make  -f test/CMakeFiles/PoseClustering_test1_autogen.dir/build.make test/CMakeFiles/PoseClustering_test1_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/PoseClustering_test1_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target PoseClustering_test1_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/PoseClustering_test1_autogen.dir/build.make test/CMakeFiles/PoseClustering_test1_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 52%] Automatic MOC for target PoseClustering_test1
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/PoseClustering_test1_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 52%] Built target PoseClustering_test1_autogen
make  -f test/CMakeFiles/PoseClustering_test1.dir/build.make test/CMakeFiles/PoseClustering_test1.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/PoseClustering_test1.dir/DependInfo.cmake --color=
Scanning dependencies of target PoseClustering_test1
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/PoseClustering_test1.dir/build.make test/CMakeFiles/PoseClustering_test1.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 52%] Building CXX object test/CMakeFiles/PoseClustering_test1.dir/PoseClustering_test1_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/PoseClustering_test1_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/PoseClustering_test1.dir/PoseClustering_test1_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/PoseClustering_test1_autogen/mocs_compilation.cpp
[ 52%] Building CXX object test/CMakeFiles/PoseClustering_test1.dir/PoseClustering_test1.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/PoseClustering_test1_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/PoseClustering_test1.dir/PoseClustering_test1.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/PoseClustering_test1.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/conformationSet.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/poseClustering.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/PoseClustering_test1.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/poseClustering.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/PoseClustering_test1.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/conformationSet.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/poseClustering.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/PoseClustering_test1.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/poseClustering.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/PoseClustering_test1.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/conformationSet.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/poseClustering.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/PoseClustering_test1.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/poseClustering.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/PoseClustering_test1.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 52%] Linking CXX executable ../bin/TEST/PoseClustering_test1
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/PoseClustering_test1.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/PoseClustering_test1.dir/PoseClustering_test1_autogen/mocs_compilation.cpp.o CMakeFiles/PoseClustering_test1.dir/PoseClustering_test1.C.o -o ../bin/TEST/PoseClustering_test1  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 52%] Built target PoseClustering_test1
make  -f test/CMakeFiles/PartialChargeProcessor_test_autogen.dir/build.make test/CMakeFiles/PartialChargeProcessor_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/PartialChargeProcessor_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target PartialChargeProcessor_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/PartialChargeProcessor_test_autogen.dir/build.make test/CMakeFiles/PartialChargeProcessor_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 52%] Automatic MOC for target PartialChargeProcessor_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/PartialChargeProcessor_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 52%] Built target PartialChargeProcessor_test_autogen
make  -f test/CMakeFiles/PartialChargeProcessor_test.dir/build.make test/CMakeFiles/PartialChargeProcessor_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/PartialChargeProcessor_test.dir/DependInfo.cmake --color=
Scanning dependencies of target PartialChargeProcessor_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/PartialChargeProcessor_test.dir/build.make test/CMakeFiles/PartialChargeProcessor_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 52%] Building CXX object test/CMakeFiles/PartialChargeProcessor_test.dir/PartialChargeProcessor_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/PartialChargeProcessor_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/PartialChargeProcessor_test.dir/PartialChargeProcessor_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/PartialChargeProcessor_test_autogen/mocs_compilation.cpp
[ 52%] Building CXX object test/CMakeFiles/PartialChargeProcessor_test.dir/PartialChargeProcessor_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/PartialChargeProcessor_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/PartialChargeProcessor_test.dir/PartialChargeProcessor_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/PartialChargeProcessor_test.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/PartialChargeProcessor_test.C:12:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/MOLFile.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/SDFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/PartialChargeProcessor_test.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/PartialChargeProcessor_test.C:12:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/MOLFile.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/SDFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/PartialChargeProcessor_test.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/PartialChargeProcessor_test.C:12:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/MOLFile.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/SDFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/PartialChargeProcessor_test.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 52%] Linking CXX executable ../bin/TEST/PartialChargeProcessor_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/PartialChargeProcessor_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/PartialChargeProcessor_test.dir/PartialChargeProcessor_test_autogen/mocs_compilation.cpp.o CMakeFiles/PartialChargeProcessor_test.dir/PartialChargeProcessor_test.C.o -o ../bin/TEST/PartialChargeProcessor_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 52%] Built target PartialChargeProcessor_test
make  -f test/CMakeFiles/ConstRandomAccessIterator_test_autogen.dir/build.make test/CMakeFiles/ConstRandomAccessIterator_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/ConstRandomAccessIterator_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target ConstRandomAccessIterator_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/ConstRandomAccessIterator_test_autogen.dir/build.make test/CMakeFiles/ConstRandomAccessIterator_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 52%] Automatic MOC for target ConstRandomAccessIterator_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/ConstRandomAccessIterator_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 52%] Built target ConstRandomAccessIterator_test_autogen
make  -f test/CMakeFiles/ConstRandomAccessIterator_test.dir/build.make test/CMakeFiles/ConstRandomAccessIterator_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/ConstRandomAccessIterator_test.dir/DependInfo.cmake --color=
Scanning dependencies of target ConstRandomAccessIterator_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/ConstRandomAccessIterator_test.dir/build.make test/CMakeFiles/ConstRandomAccessIterator_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 52%] Building CXX object test/CMakeFiles/ConstRandomAccessIterator_test.dir/ConstRandomAccessIterator_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/ConstRandomAccessIterator_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/ConstRandomAccessIterator_test.dir/ConstRandomAccessIterator_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/ConstRandomAccessIterator_test_autogen/mocs_compilation.cpp
[ 52%] Building CXX object test/CMakeFiles/ConstRandomAccessIterator_test.dir/ConstRandomAccessIterator_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/ConstRandomAccessIterator_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/ConstRandomAccessIterator_test.dir/ConstRandomAccessIterator_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ConstRandomAccessIterator_test.C
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ConstRandomAccessIterator_test.C: In function 'int main(int, char**)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ConstRandomAccessIterator_test.C:387:10: warning: implicitly-declared 'BALL::ConstRandomAccessIterator<std::vector<float>, float, int, VectorIteratorTraits_<float> >& BALL::ConstRandomAccessIterator<std::vector<float>, float, int, VectorIteratorTraits_<float> >::operator=(const BALL::ConstRandomAccessIterator<std::vector<float>, float, int, VectorIteratorTraits_<float> >&)' is deprecated [-Wdeprecated-copy]
  387 |  p = m + 2;
      |          ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ConstRandomAccessIterator_test.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:47:15: note: because 'BALL::ConstRandomAccessIterator<std::vector<float>, float, int, VectorIteratorTraits_<float> >' has user-provided 'BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = std::vector<float>; DataType = float; Position = int; Traits = VectorIteratorTraits_<float>]'
   47 |   BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::ConstRandomAccessIterator<std::vector<float>, float, int, VectorIteratorTraits_<float> >& BALL::ConstRandomAccessIterator<std::vector<float>, float, int, VectorIteratorTraits_<float> >::operator=(const BALL::ConstRandomAccessIterator<std::vector<float>, float, int, VectorIteratorTraits_<float> >&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:24:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<std::vector<float>, float, int, VectorIteratorTraits_<float> >& BALL::ConstBidirectionalIterator<std::vector<float>, float, int, VectorIteratorTraits_<float> >::operator=(const BALL::ConstBidirectionalIterator<std::vector<float>, float, int, VectorIteratorTraits_<float> >&)' is deprecated [-Wdeprecated-copy]
   24 |  class ConstRandomAccessIterator
      |        ^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ConstRandomAccessIterator_test.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<std::vector<float>, float, int, VectorIteratorTraits_<float> >' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = std::vector<float>; DataType = float; Position = int; Traits = VectorIteratorTraits_<float>]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ConstRandomAccessIterator_test.C: In function 'int main(int, char**)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ConstRandomAccessIterator_test.C:387:10: note: synthesized method 'BALL::ConstRandomAccessIterator<std::vector<float>, float, int, VectorIteratorTraits_<float> >& BALL::ConstRandomAccessIterator<std::vector<float>, float, int, VectorIteratorTraits_<float> >::operator=(const BALL::ConstRandomAccessIterator<std::vector<float>, float, int, VectorIteratorTraits_<float> >&)' first required here
  387 |  p = m + 2;
      |          ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ConstRandomAccessIterator_test.C:389:10: warning: implicitly-declared 'BALL::ConstRandomAccessIterator<std::vector<float>, float, int, VectorIteratorTraits_<float> >& BALL::ConstRandomAccessIterator<std::vector<float>, float, int, VectorIteratorTraits_<float> >::operator=(const BALL::ConstRandomAccessIterator<std::vector<float>, float, int, VectorIteratorTraits_<float> >&)' is deprecated [-Wdeprecated-copy]
  389 |  p = m + 4;
      |          ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ConstRandomAccessIterator_test.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:47:15: note: because 'BALL::ConstRandomAccessIterator<std::vector<float>, float, int, VectorIteratorTraits_<float> >' has user-provided 'BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = std::vector<float>; DataType = float; Position = int; Traits = VectorIteratorTraits_<float>]'
   47 |   BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ConstRandomAccessIterator_test.C:402:10: warning: implicitly-declared 'BALL::ConstRandomAccessIterator<std::vector<float>, float, int, VectorIteratorTraits_<float> >& BALL::ConstRandomAccessIterator<std::vector<float>, float, int, VectorIteratorTraits_<float> >::operator=(const BALL::ConstRandomAccessIterator<std::vector<float>, float, int, VectorIteratorTraits_<float> >&)' is deprecated [-Wdeprecated-copy]
  402 |  p = m - 2;
      |          ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ConstRandomAccessIterator_test.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:47:15: note: because 'BALL::ConstRandomAccessIterator<std::vector<float>, float, int, VectorIteratorTraits_<float> >' has user-provided 'BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = std::vector<float>; DataType = float; Position = int; Traits = VectorIteratorTraits_<float>]'
   47 |   BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ConstRandomAccessIterator_test.C:404:10: warning: implicitly-declared 'BALL::ConstRandomAccessIterator<std::vector<float>, float, int, VectorIteratorTraits_<float> >& BALL::ConstRandomAccessIterator<std::vector<float>, float, int, VectorIteratorTraits_<float> >::operator=(const BALL::ConstRandomAccessIterator<std::vector<float>, float, int, VectorIteratorTraits_<float> >&)' is deprecated [-Wdeprecated-copy]
  404 |  p = m - 5;
      |          ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ConstRandomAccessIterator_test.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:47:15: note: because 'BALL::ConstRandomAccessIterator<std::vector<float>, float, int, VectorIteratorTraits_<float> >' has user-provided 'BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = std::vector<float>; DataType = float; Position = int; Traits = VectorIteratorTraits_<float>]'
   47 |   BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ConstRandomAccessIterator_test.C:422:24: warning: implicitly-declared 'BALL::ConstRandomAccessIterator<std::vector<float>, float, int, VectorIteratorTraits_<float> >& BALL::ConstRandomAccessIterator<std::vector<float>, float, int, VectorIteratorTraits_<float> >::operator=(const BALL::ConstRandomAccessIterator<std::vector<float>, float, int, VectorIteratorTraits_<float> >&)' is deprecated [-Wdeprecated-copy]
  422 |  m1 = MyIterator::end(v);
      |                        ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ConstRandomAccessIterator_test.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:47:15: note: because 'BALL::ConstRandomAccessIterator<std::vector<float>, float, int, VectorIteratorTraits_<float> >' has user-provided 'BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = std::vector<float>; DataType = float; Position = int; Traits = VectorIteratorTraits_<float>]'
   47 |   BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ConstRandomAccessIterator_test.C:441:38: warning: implicitly-declared 'BALL::ConstRandomAccessIterator<std::vector<float>, float, int, VectorIteratorTraits_<float> >& BALL::ConstRandomAccessIterator<std::vector<float>, float, int, VectorIteratorTraits_<float> >::operator=(const BALL::ConstRandomAccessIterator<std::vector<float>, float, int, VectorIteratorTraits_<float> >&)' is deprecated [-Wdeprecated-copy]
  441 |  m1 = MyIterator(MyIterator::begin(v));
      |                                      ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ConstRandomAccessIterator_test.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:47:15: note: because 'BALL::ConstRandomAccessIterator<std::vector<float>, float, int, VectorIteratorTraits_<float> >' has user-provided 'BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = std::vector<float>; DataType = float; Position = int; Traits = VectorIteratorTraits_<float>]'
   47 |   BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ConstRandomAccessIterator_test.C:459:38: warning: implicitly-declared 'BALL::ConstRandomAccessIterator<std::vector<float>, float, int, VectorIteratorTraits_<float> >& BALL::ConstRandomAccessIterator<std::vector<float>, float, int, VectorIteratorTraits_<float> >::operator=(const BALL::ConstRandomAccessIterator<std::vector<float>, float, int, VectorIteratorTraits_<float> >&)' is deprecated [-Wdeprecated-copy]
  459 |  m1 = MyIterator(MyIterator::begin(v));
      |                                      ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ConstRandomAccessIterator_test.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:47:15: note: because 'BALL::ConstRandomAccessIterator<std::vector<float>, float, int, VectorIteratorTraits_<float> >' has user-provided 'BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = std::vector<float>; DataType = float; Position = int; Traits = VectorIteratorTraits_<float>]'
   47 |   BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ConstRandomAccessIterator_test.C:480:38: warning: implicitly-declared 'BALL::ConstRandomAccessIterator<std::vector<float>, float, int, VectorIteratorTraits_<float> >& BALL::ConstRandomAccessIterator<std::vector<float>, float, int, VectorIteratorTraits_<float> >::operator=(const BALL::ConstRandomAccessIterator<std::vector<float>, float, int, VectorIteratorTraits_<float> >&)' is deprecated [-Wdeprecated-copy]
  480 |  m1 = MyIterator(MyIterator::begin(v));
      |                                      ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ConstRandomAccessIterator_test.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:47:15: note: because 'BALL::ConstRandomAccessIterator<std::vector<float>, float, int, VectorIteratorTraits_<float> >' has user-provided 'BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = std::vector<float>; DataType = float; Position = int; Traits = VectorIteratorTraits_<float>]'
   47 |   BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ConstRandomAccessIterator_test.C:496:38: warning: implicitly-declared 'BALL::ConstRandomAccessIterator<std::vector<float>, float, int, VectorIteratorTraits_<float> >& BALL::ConstRandomAccessIterator<std::vector<float>, float, int, VectorIteratorTraits_<float> >::operator=(const BALL::ConstRandomAccessIterator<std::vector<float>, float, int, VectorIteratorTraits_<float> >&)' is deprecated [-Wdeprecated-copy]
  496 |  m1 = MyIterator(MyIterator::begin(v));
      |                                      ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ConstRandomAccessIterator_test.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:47:15: note: because 'BALL::ConstRandomAccessIterator<std::vector<float>, float, int, VectorIteratorTraits_<float> >' has user-provided 'BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = std::vector<float>; DataType = float; Position = int; Traits = VectorIteratorTraits_<float>]'
   47 |   BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~
[ 52%] Linking CXX executable ../bin/TEST/ConstRandomAccessIterator_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/ConstRandomAccessIterator_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/ConstRandomAccessIterator_test.dir/ConstRandomAccessIterator_test_autogen/mocs_compilation.cpp.o CMakeFiles/ConstRandomAccessIterator_test.dir/ConstRandomAccessIterator_test.C.o -o ../bin/TEST/ConstRandomAccessIterator_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 52%] Built target ConstRandomAccessIterator_test
make  -f test/CMakeFiles/Enumerator_test_autogen.dir/build.make test/CMakeFiles/Enumerator_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/Enumerator_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target Enumerator_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/Enumerator_test_autogen.dir/build.make test/CMakeFiles/Enumerator_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 52%] Automatic MOC for target Enumerator_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/Enumerator_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 52%] Built target Enumerator_test_autogen
make  -f test/CMakeFiles/Enumerator_test.dir/build.make test/CMakeFiles/Enumerator_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/Enumerator_test.dir/DependInfo.cmake --color=
Scanning dependencies of target Enumerator_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/Enumerator_test.dir/build.make test/CMakeFiles/Enumerator_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 52%] Building CXX object test/CMakeFiles/Enumerator_test.dir/Enumerator_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/Enumerator_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Enumerator_test.dir/Enumerator_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/Enumerator_test_autogen/mocs_compilation.cpp
[ 53%] Building CXX object test/CMakeFiles/Enumerator_test.dir/Enumerator_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/Enumerator_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Enumerator_test.dir/Enumerator_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Enumerator_test.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Enumerator_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/enumerator.h: In instantiation of 'BALL::BaseIterator<Container, DataType, Position, Traits>::BaseIterator(const BALL::BaseIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Enumerator<BALL::String, __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> >, char>; DataType = BALL::String; Position = BALL::EnumeratorIndex*; Traits = BALL::Enumerator<BALL::String, __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> >, char>::IteratorTraits_]':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/forwardIterator.h:48:66:   required from 'BALL::ConstForwardIterator<Container, DataType, Position, Traits>::ConstForwardIterator(const BALL::ConstForwardIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Enumerator<BALL::String, __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> >, char>; DataType = BALL::String; Position = BALL::EnumeratorIndex*; Traits = BALL::Enumerator<BALL::String, __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> >, char>::IteratorTraits_]'
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Enumerator_test.C:135:84:   required from here
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/enumerator.h:426:9: warning: implicitly-declared 'BALL::EnumeratorIndex::EnumeratorIndex(const BALL::EnumeratorIndex&)' is deprecated [-Wdeprecated-copy]
  426 |   class IteratorTraits_
      |         ^~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/enumerator.h:91:26: note: because 'BALL::EnumeratorIndex' has user-provided 'const BALL::EnumeratorIndex& BALL::EnumeratorIndex::operator=(const BALL::EnumeratorIndex&)'
   91 |   const EnumeratorIndex& operator = (const EnumeratorIndex& rhs);
      |                          ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/forwardIterator.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashSet.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SYSTEM/file.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/classTest.h:5,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Enumerator_test.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/baseIterator.h:93:30: note: synthesized method 'BALL::Enumerator<BALL::String, __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> >, char>::IteratorTraits_::IteratorTraits_(const BALL::Enumerator<BALL::String, __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> >, char>::IteratorTraits_&)' first required here
   93 |    : traits_(iterator.traits_)
      |                              ^
[ 53%] Linking CXX executable ../bin/TEST/Enumerator_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/Enumerator_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Enumerator_test.dir/Enumerator_test_autogen/mocs_compilation.cpp.o CMakeFiles/Enumerator_test.dir/Enumerator_test.C.o -o ../bin/TEST/Enumerator_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 53%] Built target Enumerator_test
make  -f test/CMakeFiles/PoseClustering_test3_autogen.dir/build.make test/CMakeFiles/PoseClustering_test3_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/PoseClustering_test3_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target PoseClustering_test3_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/PoseClustering_test3_autogen.dir/build.make test/CMakeFiles/PoseClustering_test3_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 53%] Automatic MOC for target PoseClustering_test3
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/PoseClustering_test3_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 53%] Built target PoseClustering_test3_autogen
make  -f test/CMakeFiles/PoseClustering_test3.dir/build.make test/CMakeFiles/PoseClustering_test3.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/PoseClustering_test3.dir/DependInfo.cmake --color=
Scanning dependencies of target PoseClustering_test3
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/PoseClustering_test3.dir/build.make test/CMakeFiles/PoseClustering_test3.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 53%] Building CXX object test/CMakeFiles/PoseClustering_test3.dir/PoseClustering_test3_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/PoseClustering_test3_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/PoseClustering_test3.dir/PoseClustering_test3_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/PoseClustering_test3_autogen/mocs_compilation.cpp
[ 53%] Building CXX object test/CMakeFiles/PoseClustering_test3.dir/PoseClustering_test3.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/PoseClustering_test3_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/PoseClustering_test3.dir/PoseClustering_test3.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/PoseClustering_test3.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/conformationSet.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/poseClustering.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/PoseClustering_test3.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/poseClustering.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/PoseClustering_test3.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/conformationSet.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/poseClustering.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/PoseClustering_test3.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/poseClustering.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/PoseClustering_test3.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/conformationSet.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/poseClustering.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/PoseClustering_test3.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/poseClustering.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/PoseClustering_test3.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 53%] Linking CXX executable ../bin/TEST/PoseClustering_test3
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/PoseClustering_test3.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/PoseClustering_test3.dir/PoseClustering_test3_autogen/mocs_compilation.cpp.o CMakeFiles/PoseClustering_test3.dir/PoseClustering_test3.C.o -o ../bin/TEST/PoseClustering_test3  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 53%] Built target PoseClustering_test3
make  -f test/CMakeFiles/ForwardIterator_test_autogen.dir/build.make test/CMakeFiles/ForwardIterator_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/ForwardIterator_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target ForwardIterator_test_autogen
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make  -f test/CMakeFiles/ForwardIterator_test_autogen.dir/build.make test/CMakeFiles/ForwardIterator_test_autogen.dir/build
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[ 53%] Automatic MOC for target ForwardIterator_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/ForwardIterator_test_autogen.dir/AutogenInfo.json Release
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[ 53%] Built target ForwardIterator_test_autogen
make  -f test/CMakeFiles/ForwardIterator_test.dir/build.make test/CMakeFiles/ForwardIterator_test.dir/depend
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cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/ForwardIterator_test.dir/DependInfo.cmake --color=
Scanning dependencies of target ForwardIterator_test
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[ 53%] Building CXX object test/CMakeFiles/ForwardIterator_test.dir/ForwardIterator_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/ForwardIterator_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/ForwardIterator_test.dir/ForwardIterator_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/ForwardIterator_test_autogen/mocs_compilation.cpp
[ 53%] Building CXX object test/CMakeFiles/ForwardIterator_test.dir/ForwardIterator_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/ForwardIterator_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/ForwardIterator_test.dir/ForwardIterator_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ForwardIterator_test.C
[ 53%] Linking CXX executable ../bin/TEST/ForwardIterator_test
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/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/ForwardIterator_test.dir/ForwardIterator_test_autogen/mocs_compilation.cpp.o CMakeFiles/ForwardIterator_test.dir/ForwardIterator_test.C.o -o ../bin/TEST/ForwardIterator_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
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cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/BaseIterator_test.dir/DependInfo.cmake --color=
Scanning dependencies of target BaseIterator_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/BaseIterator_test.dir/build.make test/CMakeFiles/BaseIterator_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 53%] Building CXX object test/CMakeFiles/BaseIterator_test.dir/BaseIterator_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/BaseIterator_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/BaseIterator_test.dir/BaseIterator_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/BaseIterator_test_autogen/mocs_compilation.cpp
[ 53%] Building CXX object test/CMakeFiles/BaseIterator_test.dir/BaseIterator_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/BaseIterator_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/BaseIterator_test.dir/BaseIterator_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/BaseIterator_test.C
[ 53%] Linking CXX executable ../bin/TEST/BaseIterator_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/BaseIterator_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/BaseIterator_test.dir/BaseIterator_test_autogen/mocs_compilation.cpp.o CMakeFiles/BaseIterator_test.dir/BaseIterator_test.C.o -o ../bin/TEST/BaseIterator_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 53%] Built target BaseIterator_test
make  -f test/CMakeFiles/ExpressionParser_test_autogen.dir/build.make test/CMakeFiles/ExpressionParser_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/ExpressionParser_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target ExpressionParser_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/ExpressionParser_test_autogen.dir/build.make test/CMakeFiles/ExpressionParser_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 53%] Automatic MOC for target ExpressionParser_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/ExpressionParser_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 53%] Built target ExpressionParser_test_autogen
make  -f test/CMakeFiles/ExpressionParser_test.dir/build.make test/CMakeFiles/ExpressionParser_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/ExpressionParser_test.dir/DependInfo.cmake --color=
Scanning dependencies of target ExpressionParser_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/ExpressionParser_test.dir/build.make test/CMakeFiles/ExpressionParser_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 53%] Building CXX object test/CMakeFiles/ExpressionParser_test.dir/ExpressionParser_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/ExpressionParser_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/ExpressionParser_test.dir/ExpressionParser_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/ExpressionParser_test_autogen/mocs_compilation.cpp
[ 53%] Building CXX object test/CMakeFiles/ExpressionParser_test.dir/ExpressionParser_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/ExpressionParser_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/ExpressionParser_test.dir/ExpressionParser_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ExpressionParser_test.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/standardPredicates.h:19,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ExpressionParser_test.C:14:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ExpressionParser_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/standardPredicates.h:19,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ExpressionParser_test.C:14:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ExpressionParser_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/standardPredicates.h:19,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ExpressionParser_test.C:14:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ExpressionParser_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 53%] Linking CXX executable ../bin/TEST/ExpressionParser_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/ExpressionParser_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/ExpressionParser_test.dir/ExpressionParser_test_autogen/mocs_compilation.cpp.o CMakeFiles/ExpressionParser_test.dir/ExpressionParser_test.C.o -o ../bin/TEST/ExpressionParser_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 53%] Built target ExpressionParser_test
make  -f test/CMakeFiles/CompositeAncestorIteratorTraits_test_autogen.dir/build.make test/CMakeFiles/CompositeAncestorIteratorTraits_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/CompositeAncestorIteratorTraits_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target CompositeAncestorIteratorTraits_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/CompositeAncestorIteratorTraits_test_autogen.dir/build.make test/CMakeFiles/CompositeAncestorIteratorTraits_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 53%] Automatic MOC for target CompositeAncestorIteratorTraits_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/CompositeAncestorIteratorTraits_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 53%] Built target CompositeAncestorIteratorTraits_test_autogen
make  -f test/CMakeFiles/CompositeAncestorIteratorTraits_test.dir/build.make test/CMakeFiles/CompositeAncestorIteratorTraits_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/CompositeAncestorIteratorTraits_test.dir/DependInfo.cmake --color=
Scanning dependencies of target CompositeAncestorIteratorTraits_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/CompositeAncestorIteratorTraits_test.dir/build.make test/CMakeFiles/CompositeAncestorIteratorTraits_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 53%] Building CXX object test/CMakeFiles/CompositeAncestorIteratorTraits_test.dir/CompositeAncestorIteratorTraits_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CompositeAncestorIteratorTraits_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/CompositeAncestorIteratorTraits_test.dir/CompositeAncestorIteratorTraits_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CompositeAncestorIteratorTraits_test_autogen/mocs_compilation.cpp
[ 53%] Building CXX object test/CMakeFiles/CompositeAncestorIteratorTraits_test.dir/CompositeAncestorIteratorTraits_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CompositeAncestorIteratorTraits_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/CompositeAncestorIteratorTraits_test.dir/CompositeAncestorIteratorTraits_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/CompositeAncestorIteratorTraits_test.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/CompositeAncestorIteratorTraits_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/CompositeAncestorIteratorTraits_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/CompositeAncestorIteratorTraits_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/CompositeAncestorIteratorTraits_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/CompositeAncestorIteratorTraits_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/CompositeAncestorIteratorTraits_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 53%] Linking CXX executable ../bin/TEST/CompositeAncestorIteratorTraits_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/CompositeAncestorIteratorTraits_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/CompositeAncestorIteratorTraits_test.dir/CompositeAncestorIteratorTraits_test_autogen/mocs_compilation.cpp.o CMakeFiles/CompositeAncestorIteratorTraits_test.dir/CompositeAncestorIteratorTraits_test.C.o -o ../bin/TEST/CompositeAncestorIteratorTraits_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 53%] Built target CompositeAncestorIteratorTraits_test
make  -f test/CMakeFiles/Debug_test_autogen.dir/build.make test/CMakeFiles/Debug_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/Debug_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target Debug_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/Debug_test_autogen.dir/build.make test/CMakeFiles/Debug_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 53%] Automatic MOC for target Debug_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/Debug_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 53%] Built target Debug_test_autogen
make  -f test/CMakeFiles/Debug_test.dir/build.make test/CMakeFiles/Debug_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/Debug_test.dir/DependInfo.cmake --color=
Scanning dependencies of target Debug_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/Debug_test.dir/build.make test/CMakeFiles/Debug_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 53%] Building CXX object test/CMakeFiles/Debug_test.dir/Debug_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/Debug_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Debug_test.dir/Debug_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/Debug_test_autogen/mocs_compilation.cpp
[ 53%] Building CXX object test/CMakeFiles/Debug_test.dir/Debug_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/Debug_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Debug_test.dir/Debug_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Debug_test.C
[ 53%] Linking CXX executable ../bin/TEST/Debug_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/Debug_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Debug_test.dir/Debug_test_autogen/mocs_compilation.cpp.o CMakeFiles/Debug_test.dir/Debug_test.C.o -o ../bin/TEST/Debug_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 53%] Built target Debug_test
make  -f test/CMakeFiles/RTTI_test_autogen.dir/build.make test/CMakeFiles/RTTI_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/RTTI_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target RTTI_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/RTTI_test_autogen.dir/build.make test/CMakeFiles/RTTI_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 53%] Automatic MOC for target RTTI_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/RTTI_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 53%] Built target RTTI_test_autogen
make  -f test/CMakeFiles/RTTI_test.dir/build.make test/CMakeFiles/RTTI_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/RTTI_test.dir/DependInfo.cmake --color=
Scanning dependencies of target RTTI_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/RTTI_test.dir/build.make test/CMakeFiles/RTTI_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 53%] Building CXX object test/CMakeFiles/RTTI_test.dir/RTTI_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/RTTI_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/RTTI_test.dir/RTTI_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/RTTI_test_autogen/mocs_compilation.cpp
[ 53%] Building CXX object test/CMakeFiles/RTTI_test.dir/RTTI_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/RTTI_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/RTTI_test.dir/RTTI_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/RTTI_test.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chain.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chainIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/protein.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/RTTI_test.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chain.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chainIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/protein.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/RTTI_test.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chain.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chainIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/protein.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/RTTI_test.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chain.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chainIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/protein.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/RTTI_test.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chain.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chainIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/protein.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/RTTI_test.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chain.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chainIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/protein.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/RTTI_test.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 53%] Linking CXX executable ../bin/TEST/RTTI_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/RTTI_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/RTTI_test.dir/RTTI_test_autogen/mocs_compilation.cpp.o CMakeFiles/RTTI_test.dir/RTTI_test.C.o -o ../bin/TEST/RTTI_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 53%] Built target RTTI_test
make  -f test/CMakeFiles/PCRModel_test_autogen.dir/build.make test/CMakeFiles/PCRModel_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/PCRModel_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target PCRModel_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/PCRModel_test_autogen.dir/build.make test/CMakeFiles/PCRModel_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 53%] Automatic MOC for target PCRModel_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/PCRModel_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 53%] Built target PCRModel_test_autogen
make  -f test/CMakeFiles/PCRModel_test.dir/build.make test/CMakeFiles/PCRModel_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/PCRModel_test.dir/DependInfo.cmake --color=
Scanning dependencies of target PCRModel_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/PCRModel_test.dir/build.make test/CMakeFiles/PCRModel_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 53%] Building CXX object test/CMakeFiles/PCRModel_test.dir/PCRModel_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/PCRModel_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/PCRModel_test.dir/PCRModel_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/PCRModel_test_autogen/mocs_compilation.cpp
[ 53%] Building CXX object test/CMakeFiles/PCRModel_test.dir/PCRModel_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/PCRModel_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/PCRModel_test.dir/PCRModel_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/PCRModel_test.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/PCRModel_test.C:4:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/PCRModel_test.C:4:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/PCRModel_test.C:4:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/PCRModel_test.C:4:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/PCRModel_test.C:4:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/PCRModel_test.C:4:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 53%] Linking CXX executable ../bin/TEST/PCRModel_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/PCRModel_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/PCRModel_test.dir/PCRModel_test_autogen/mocs_compilation.cpp.o CMakeFiles/PCRModel_test.dir/PCRModel_test.C.o -o ../bin/TEST/PCRModel_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 53%] Built target PCRModel_test
make  -f test/CMakeFiles/Composite_test5_autogen.dir/build.make test/CMakeFiles/Composite_test5_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/Composite_test5_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target Composite_test5_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/Composite_test5_autogen.dir/build.make test/CMakeFiles/Composite_test5_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 53%] Automatic MOC for target Composite_test5
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/Composite_test5_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 53%] Built target Composite_test5_autogen
make  -f test/CMakeFiles/Composite_test5.dir/build.make test/CMakeFiles/Composite_test5.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/Composite_test5.dir/DependInfo.cmake --color=
Scanning dependencies of target Composite_test5
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/Composite_test5.dir/build.make test/CMakeFiles/Composite_test5.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 53%] Building CXX object test/CMakeFiles/Composite_test5.dir/Composite_test5_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/Composite_test5_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Composite_test5.dir/Composite_test5_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/Composite_test5_autogen/mocs_compilation.cpp
[ 55%] Building CXX object test/CMakeFiles/Composite_test5.dir/Composite_test5.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/Composite_test5_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Composite_test5.dir/Composite_test5.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Composite_test5.C
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Composite_test5.C: In function 'int main(int, char**)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Composite_test5.C:31:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::ChildCompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::ChildCompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::ChildCompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   31 |   sub_it = a.endChildComposite();
      |                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Composite_test5.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::ChildCompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::ChildCompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::ChildCompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::ChildCompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::ChildCompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::ChildCompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::ChildCompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::ChildCompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::ChildCompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::ChildCompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Composite_test5.C: In function 'int main(int, char**)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Composite_test5.C:31:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::ChildCompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::ChildCompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::ChildCompositeIteratorTraits>&)' first required here
   31 |   sub_it = a.endChildComposite();
      |                                ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Composite_test5.C:56:62: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::ChildCompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::ChildCompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::ChildCompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   56 |   sub_it = const_cast<const Composite&>(a).endChildComposite();
      |                                                              ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Composite_test5.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::ChildCompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::ChildCompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
[ 55%] Linking CXX executable ../bin/TEST/Composite_test5
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/Composite_test5.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Composite_test5.dir/Composite_test5_autogen/mocs_compilation.cpp.o CMakeFiles/Composite_test5.dir/Composite_test5.C.o -o ../bin/TEST/Composite_test5  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 55%] Built target Composite_test5
make  -f test/CMakeFiles/Composite_test4_autogen.dir/build.make test/CMakeFiles/Composite_test4_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/Composite_test4_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target Composite_test4_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/Composite_test4_autogen.dir/build.make test/CMakeFiles/Composite_test4_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 55%] Automatic MOC for target Composite_test4
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/Composite_test4_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 55%] Built target Composite_test4_autogen
make  -f test/CMakeFiles/Composite_test4.dir/build.make test/CMakeFiles/Composite_test4.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/Composite_test4.dir/DependInfo.cmake --color=
Scanning dependencies of target Composite_test4
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/Composite_test4.dir/build.make test/CMakeFiles/Composite_test4.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 55%] Building CXX object test/CMakeFiles/Composite_test4.dir/Composite_test4_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/Composite_test4_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Composite_test4.dir/Composite_test4_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/Composite_test4_autogen/mocs_compilation.cpp
[ 55%] Building CXX object test/CMakeFiles/Composite_test4.dir/Composite_test4.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/Composite_test4_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Composite_test4.dir/Composite_test4.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Composite_test4.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chain.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Composite_test4.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Composite_test4.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chain.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Composite_test4.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Composite_test4.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chain.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Composite_test4.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Composite_test4.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 55%] Linking CXX executable ../bin/TEST/Composite_test4
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/Composite_test4.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Composite_test4.dir/Composite_test4_autogen/mocs_compilation.cpp.o CMakeFiles/Composite_test4.dir/Composite_test4.C.o -o ../bin/TEST/Composite_test4  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
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make  -f test/CMakeFiles/Parameters_test_autogen.dir/build.make test/CMakeFiles/Parameters_test_autogen.dir/depend
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cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/Parameters_test_autogen.dir/AutogenInfo.json Release
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cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/Parameters_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Parameters_test.dir/Parameters_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/Parameters_test_autogen/mocs_compilation.cpp
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cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/Parameters_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Parameters_test.dir/Parameters_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Parameters_test.C
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/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Parameters_test.dir/Parameters_test_autogen/mocs_compilation.cpp.o CMakeFiles/Parameters_test.dir/Parameters_test.C.o -o ../bin/TEST/Parameters_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
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make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 56%] Building CXX object test/CMakeFiles/Fragment_test.dir/Fragment_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/Fragment_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Fragment_test.dir/Fragment_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/Fragment_test_autogen/mocs_compilation.cpp
[ 56%] Building CXX object test/CMakeFiles/Fragment_test.dir/Fragment_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/Fragment_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Fragment_test.dir/Fragment_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Fragment_test.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Fragment_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Fragment_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Fragment_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Fragment_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Fragment_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Fragment_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 56%] Linking CXX executable ../bin/TEST/Fragment_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/Fragment_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Fragment_test.dir/Fragment_test_autogen/mocs_compilation.cpp.o CMakeFiles/Fragment_test.dir/Fragment_test.C.o -o ../bin/TEST/Fragment_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 56%] Built target Fragment_test
make  -f test/CMakeFiles/Composite_test2_autogen.dir/build.make test/CMakeFiles/Composite_test2_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/Composite_test2_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target Composite_test2_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/Composite_test2_autogen.dir/build.make test/CMakeFiles/Composite_test2_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 56%] Automatic MOC for target Composite_test2
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/Composite_test2_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 56%] Built target Composite_test2_autogen
make  -f test/CMakeFiles/Composite_test2.dir/build.make test/CMakeFiles/Composite_test2.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/Composite_test2.dir/DependInfo.cmake --color=
Scanning dependencies of target Composite_test2
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/Composite_test2.dir/build.make test/CMakeFiles/Composite_test2.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 56%] Building CXX object test/CMakeFiles/Composite_test2.dir/Composite_test2_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/Composite_test2_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Composite_test2.dir/Composite_test2_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/Composite_test2_autogen/mocs_compilation.cpp
[ 56%] Building CXX object test/CMakeFiles/Composite_test2.dir/Composite_test2.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/Composite_test2_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Composite_test2.dir/Composite_test2.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Composite_test2.C
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Composite_test2.C: In function 'int main(int, char**)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Composite_test2.C:29:59: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   29 |   sub_it = const_cast<const Composite&>(a).beginComposite();
      |                                                           ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Composite_test2.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Composite_test2.C:50:58: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   50 |  sub_it = const_cast<const Composite&>(f).beginComposite();
      |                                                          ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Composite_test2.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Composite_test2.C:61:58: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   61 |  sub_it = const_cast<const Composite&>(h).beginComposite();
      |                                                          ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Composite_test2.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Composite_test2.C:80:27: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   80 |   sub_it = a.endComposite();
      |                           ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Composite_test2.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Composite_test2.C: In function 'int main(int, char**)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Composite_test2.C:80:27: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
   80 |   sub_it = a.endComposite();
      |                           ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Composite_test2.C:111:57: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  111 |   sub_it = const_cast<const Composite&>(a).endComposite();
      |                                                         ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Composite_test2.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Composite_test2.C:305:34: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::ChildCompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::ChildCompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::ChildCompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  305 |   sub_it = a.beginChildComposite();
      |                                  ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Composite_test2.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::ChildCompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::ChildCompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::ChildCompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::ChildCompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::ChildCompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::ChildCompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::ChildCompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::ChildCompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::ChildCompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::ChildCompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Composite_test2.C: In function 'int main(int, char**)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Composite_test2.C:305:34: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::ChildCompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::ChildCompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::ChildCompositeIteratorTraits>&)' first required here
  305 |   sub_it = a.beginChildComposite();
      |                                  ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Composite_test2.C:320:33: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::ChildCompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::ChildCompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::ChildCompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  320 |  sub_it = f.beginChildComposite();
      |                                 ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Composite_test2.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::ChildCompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::ChildCompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Composite_test2.C:328:33: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::ChildCompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::ChildCompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::ChildCompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  328 |  sub_it = h.beginChildComposite();
      |                                 ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Composite_test2.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::ChildCompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::ChildCompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Composite_test2.C:344:64: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::ChildCompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::ChildCompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::ChildCompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  344 |   sub_it = const_cast<const Composite&>(a).beginChildComposite();
      |                                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Composite_test2.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::ChildCompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::ChildCompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Composite_test2.C:359:63: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::ChildCompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::ChildCompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::ChildCompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  359 |  sub_it = const_cast<const Composite&>(f).beginChildComposite();
      |                                                               ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Composite_test2.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::ChildCompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::ChildCompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Composite_test2.C:367:63: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::ChildCompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::ChildCompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::ChildCompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  367 |  sub_it = const_cast<const Composite&>(h).beginChildComposite();
      |                                                               ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Composite_test2.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::ChildCompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::ChildCompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
[ 56%] Linking CXX executable ../bin/TEST/Composite_test2
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/Composite_test2.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Composite_test2.dir/Composite_test2_autogen/mocs_compilation.cpp.o CMakeFiles/Composite_test2.dir/Composite_test2.C.o -o ../bin/TEST/Composite_test2  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 56%] Built target Composite_test2
make  -f test/CMakeFiles/Bruker2DFile_test_autogen.dir/build.make test/CMakeFiles/Bruker2DFile_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/Bruker2DFile_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target Bruker2DFile_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/Bruker2DFile_test_autogen.dir/build.make test/CMakeFiles/Bruker2DFile_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 56%] Automatic MOC for target Bruker2DFile_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/Bruker2DFile_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 56%] Built target Bruker2DFile_test_autogen
make  -f test/CMakeFiles/Bruker2DFile_test.dir/build.make test/CMakeFiles/Bruker2DFile_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/Bruker2DFile_test.dir/DependInfo.cmake --color=
Scanning dependencies of target Bruker2DFile_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/Bruker2DFile_test.dir/build.make test/CMakeFiles/Bruker2DFile_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 56%] Building CXX object test/CMakeFiles/Bruker2DFile_test.dir/Bruker2DFile_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/Bruker2DFile_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Bruker2DFile_test.dir/Bruker2DFile_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/Bruker2DFile_test_autogen/mocs_compilation.cpp
[ 56%] Building CXX object test/CMakeFiles/Bruker2DFile_test.dir/Bruker2DFile_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/Bruker2DFile_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Bruker2DFile_test.dir/Bruker2DFile_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Bruker2DFile_test.C
[ 56%] Linking CXX executable ../bin/TEST/Bruker2DFile_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/Bruker2DFile_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Bruker2DFile_test.dir/Bruker2DFile_test_autogen/mocs_compilation.cpp.o CMakeFiles/Bruker2DFile_test.dir/Bruker2DFile_test.C.o -o ../bin/TEST/Bruker2DFile_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 56%] Built target Bruker2DFile_test
make  -f test/CMakeFiles/HMOFile_test_autogen.dir/build.make test/CMakeFiles/HMOFile_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/HMOFile_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target HMOFile_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/HMOFile_test_autogen.dir/build.make test/CMakeFiles/HMOFile_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 56%] Automatic MOC for target HMOFile_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/HMOFile_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 56%] Built target HMOFile_test_autogen
make  -f test/CMakeFiles/HMOFile_test.dir/build.make test/CMakeFiles/HMOFile_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/HMOFile_test.dir/DependInfo.cmake --color=
Scanning dependencies of target HMOFile_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/HMOFile_test.dir/build.make test/CMakeFiles/HMOFile_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 56%] Building CXX object test/CMakeFiles/HMOFile_test.dir/HMOFile_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/HMOFile_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/HMOFile_test.dir/HMOFile_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/HMOFile_test_autogen/mocs_compilation.cpp
[ 56%] Building CXX object test/CMakeFiles/HMOFile_test.dir/HMOFile_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/HMOFile_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/HMOFile_test.dir/HMOFile_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/HMOFile_test.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/HMOFile.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/HMOFile_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/HMOFile.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/HMOFile_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/HMOFile.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/HMOFile_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/HMOFile.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/HMOFile_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/HMOFile.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/HMOFile_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/HMOFile.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/HMOFile_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/HMOFile_test.C: In function 'int main(int, char**)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/HMOFile_test.C:157:29: warning: unused variable 'comments' [-Wunused-variable]
  157 |  std::vector<String> const& comments = f_const.getComments();
      |                             ^~~~~~~~
[ 57%] Linking CXX executable ../bin/TEST/HMOFile_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/HMOFile_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/HMOFile_test.dir/HMOFile_test_autogen/mocs_compilation.cpp.o CMakeFiles/HMOFile_test.dir/HMOFile_test.C.o -o ../bin/TEST/HMOFile_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
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make  -f test/CMakeFiles/Line3_test_autogen.dir/build.make test/CMakeFiles/Line3_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
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make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
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cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/Line3_test_autogen.dir/AutogenInfo.json Release
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cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/Line3_test.dir/DependInfo.cmake --color=
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[ 57%] Building CXX object test/CMakeFiles/Line3_test.dir/Line3_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/Line3_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Line3_test.dir/Line3_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Line3_test.C
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/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Line3_test.dir/Line3_test_autogen/mocs_compilation.cpp.o CMakeFiles/Line3_test.dir/Line3_test.C.o -o ../bin/TEST/Line3_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
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make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
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cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/BidirectionalIterator_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/BidirectionalIterator_test.dir/BidirectionalIterator_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/BidirectionalIterator_test_autogen/mocs_compilation.cpp
[ 57%] Building CXX object test/CMakeFiles/BidirectionalIterator_test.dir/BidirectionalIterator_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/BidirectionalIterator_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/BidirectionalIterator_test.dir/BidirectionalIterator_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/BidirectionalIterator_test.C
[ 57%] Linking CXX executable ../bin/TEST/BidirectionalIterator_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/BidirectionalIterator_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/BidirectionalIterator_test.dir/BidirectionalIterator_test_autogen/mocs_compilation.cpp.o CMakeFiles/BidirectionalIterator_test.dir/BidirectionalIterator_test.C.o -o ../bin/TEST/BidirectionalIterator_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 57%] Built target BidirectionalIterator_test
make  -f test/CMakeFiles/SimpleBase_test_autogen.dir/build.make test/CMakeFiles/SimpleBase_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/SimpleBase_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target SimpleBase_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/SimpleBase_test_autogen.dir/build.make test/CMakeFiles/SimpleBase_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 57%] Automatic MOC for target SimpleBase_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/SimpleBase_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 57%] Built target SimpleBase_test_autogen
make  -f test/CMakeFiles/SimpleBase_test.dir/build.make test/CMakeFiles/SimpleBase_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/SimpleBase_test.dir/DependInfo.cmake --color=
Scanning dependencies of target SimpleBase_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/SimpleBase_test.dir/build.make test/CMakeFiles/SimpleBase_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 57%] Building CXX object test/CMakeFiles/SimpleBase_test.dir/SimpleBase_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/SimpleBase_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/SimpleBase_test.dir/SimpleBase_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/SimpleBase_test_autogen/mocs_compilation.cpp
[ 57%] Building CXX object test/CMakeFiles/SimpleBase_test.dir/SimpleBase_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/SimpleBase_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/SimpleBase_test.dir/SimpleBase_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/SimpleBase_test.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/descriptor.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/SimpleBase_test.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/descriptor.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/SimpleBase_test.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/descriptor.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/SimpleBase_test.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/descriptor.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/SimpleBase_test.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/descriptor.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/SimpleBase_test.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/descriptor.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/SimpleBase_test.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 59%] Linking CXX executable ../bin/TEST/SimpleBase_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/SimpleBase_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/SimpleBase_test.dir/SimpleBase_test_autogen/mocs_compilation.cpp.o CMakeFiles/SimpleBase_test.dir/SimpleBase_test.C.o -o ../bin/TEST/SimpleBase_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 59%] Built target SimpleBase_test
make  -f test/CMakeFiles/CompositeIteratorTraits_test_autogen.dir/build.make test/CMakeFiles/CompositeIteratorTraits_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/CompositeIteratorTraits_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target CompositeIteratorTraits_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/CompositeIteratorTraits_test_autogen.dir/build.make test/CMakeFiles/CompositeIteratorTraits_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 59%] Automatic MOC for target CompositeIteratorTraits_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/CompositeIteratorTraits_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 59%] Built target CompositeIteratorTraits_test_autogen
make  -f test/CMakeFiles/CompositeIteratorTraits_test.dir/build.make test/CMakeFiles/CompositeIteratorTraits_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/CompositeIteratorTraits_test.dir/DependInfo.cmake --color=
Scanning dependencies of target CompositeIteratorTraits_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/CompositeIteratorTraits_test.dir/build.make test/CMakeFiles/CompositeIteratorTraits_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 59%] Building CXX object test/CMakeFiles/CompositeIteratorTraits_test.dir/CompositeIteratorTraits_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CompositeIteratorTraits_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/CompositeIteratorTraits_test.dir/CompositeIteratorTraits_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CompositeIteratorTraits_test_autogen/mocs_compilation.cpp
[ 59%] Building CXX object test/CMakeFiles/CompositeIteratorTraits_test.dir/CompositeIteratorTraits_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CompositeIteratorTraits_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/CompositeIteratorTraits_test.dir/CompositeIteratorTraits_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/CompositeIteratorTraits_test.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/CompositeIteratorTraits_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/CompositeIteratorTraits_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/CompositeIteratorTraits_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/CompositeIteratorTraits_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/CompositeIteratorTraits_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/CompositeIteratorTraits_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 59%] Linking CXX executable ../bin/TEST/CompositeIteratorTraits_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/CompositeIteratorTraits_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/CompositeIteratorTraits_test.dir/CompositeIteratorTraits_test_autogen/mocs_compilation.cpp.o CMakeFiles/CompositeIteratorTraits_test.dir/CompositeIteratorTraits_test.C.o -o ../bin/TEST/CompositeIteratorTraits_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 59%] Built target CompositeIteratorTraits_test
make  -f test/CMakeFiles/PeptideBuilder_test_autogen.dir/build.make test/CMakeFiles/PeptideBuilder_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/PeptideBuilder_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target PeptideBuilder_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/PeptideBuilder_test_autogen.dir/build.make test/CMakeFiles/PeptideBuilder_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 59%] Automatic MOC for target PeptideBuilder_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/PeptideBuilder_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 59%] Built target PeptideBuilder_test_autogen
make  -f test/CMakeFiles/PeptideBuilder_test.dir/build.make test/CMakeFiles/PeptideBuilder_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/PeptideBuilder_test.dir/DependInfo.cmake --color=
Scanning dependencies of target PeptideBuilder_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/PeptideBuilder_test.dir/build.make test/CMakeFiles/PeptideBuilder_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 59%] Building CXX object test/CMakeFiles/PeptideBuilder_test.dir/PeptideBuilder_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/PeptideBuilder_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/PeptideBuilder_test.dir/PeptideBuilder_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/PeptideBuilder_test_autogen/mocs_compilation.cpp
[ 59%] Building CXX object test/CMakeFiles/PeptideBuilder_test.dir/PeptideBuilder_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/PeptideBuilder_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/PeptideBuilder_test.dir/PeptideBuilder_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/PeptideBuilder_test.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chain.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chainIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/protein.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/peptides.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/peptideBuilder.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/PeptideBuilder_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chain.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chainIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/protein.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/peptides.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/peptideBuilder.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/PeptideBuilder_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chain.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chainIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/protein.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/peptides.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/peptideBuilder.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/PeptideBuilder_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chain.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chainIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/protein.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/peptides.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/peptideBuilder.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/PeptideBuilder_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chain.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chainIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/protein.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/peptides.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/peptideBuilder.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/PeptideBuilder_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chain.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chainIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/protein.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/peptides.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/peptideBuilder.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/PeptideBuilder_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/PeptideBuilder_test.C: In function 'int main(int, char**)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/PeptideBuilder_test.C:160:30: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  160 |  res_it = prot->beginResidue();
      |                              ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chain.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chainIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/protein.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/peptides.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/peptideBuilder.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/PeptideBuilder_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Residue; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::ResidueIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Residue; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::ResidueIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/PeptideBuilder_test.C: In function 'int main(int, char**)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/PeptideBuilder_test.C:160:30: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>&)' first required here
  160 |  res_it = prot->beginResidue();
      |                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/PeptideBuilder_test.C:183:30: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  183 |  res_it = prot->beginResidue();
      |                              ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chain.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chainIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/protein.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/peptides.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/peptideBuilder.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/PeptideBuilder_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Residue; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::ResidueIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/PeptideBuilder_test.C:202:30: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  202 |  res_it = prot->beginResidue();
      |                              ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chain.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chainIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/protein.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/peptides.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/peptideBuilder.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/PeptideBuilder_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Residue; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::ResidueIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 59%] Linking CXX executable ../bin/TEST/PeptideBuilder_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/PeptideBuilder_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/PeptideBuilder_test.dir/PeptideBuilder_test_autogen/mocs_compilation.cpp.o CMakeFiles/PeptideBuilder_test.dir/PeptideBuilder_test.C.o -o ../bin/TEST/PeptideBuilder_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 59%] Built target PeptideBuilder_test
make  -f test/CMakeFiles/ResidueChecker_test_autogen.dir/build.make test/CMakeFiles/ResidueChecker_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/ResidueChecker_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target ResidueChecker_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
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make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
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cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/ResidueChecker_test_autogen.dir/AutogenInfo.json Release
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cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/ResidueChecker_test.dir/DependInfo.cmake --color=
Scanning dependencies of target ResidueChecker_test
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cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/ResidueChecker_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/ResidueChecker_test.dir/ResidueChecker_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/ResidueChecker_test_autogen/mocs_compilation.cpp
[ 60%] Building CXX object test/CMakeFiles/ResidueChecker_test.dir/ResidueChecker_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/ResidueChecker_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/ResidueChecker_test.dir/ResidueChecker_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ResidueChecker_test.C
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/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/ResidueChecker_test.dir/ResidueChecker_test_autogen/mocs_compilation.cpp.o CMakeFiles/ResidueChecker_test.dir/ResidueChecker_test.C.o -o ../bin/TEST/ResidueChecker_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
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cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/Atom_test1_autogen.dir/DependInfo.cmake --color=
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cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/Atom_test1_autogen.dir/AutogenInfo.json Release
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cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/Atom_test1.dir/DependInfo.cmake --color=
Scanning dependencies of target Atom_test1
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/Atom_test1.dir/build.make test/CMakeFiles/Atom_test1.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 60%] Building CXX object test/CMakeFiles/Atom_test1.dir/Atom_test1_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/Atom_test1_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Atom_test1.dir/Atom_test1_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/Atom_test1_autogen/mocs_compilation.cpp
[ 61%] Building CXX object test/CMakeFiles/Atom_test1.dir/Atom_test1.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/Atom_test1_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Atom_test1.dir/Atom_test1.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Atom_test1.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Atom_test1.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Atom_test1.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Atom_test1.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Atom_test1.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Atom_test1.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Atom_test1.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 61%] Linking CXX executable ../bin/TEST/Atom_test1
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/Atom_test1.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Atom_test1.dir/Atom_test1_autogen/mocs_compilation.cpp.o CMakeFiles/Atom_test1.dir/Atom_test1.C.o -o ../bin/TEST/Atom_test1  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 61%] Built target Atom_test1
make  -f test/CMakeFiles/Selectable_test_autogen.dir/build.make test/CMakeFiles/Selectable_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/Selectable_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target Selectable_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/Selectable_test_autogen.dir/build.make test/CMakeFiles/Selectable_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 61%] Automatic MOC for target Selectable_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/Selectable_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 61%] Built target Selectable_test_autogen
make  -f test/CMakeFiles/Selectable_test.dir/build.make test/CMakeFiles/Selectable_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/Selectable_test.dir/DependInfo.cmake --color=
Scanning dependencies of target Selectable_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/Selectable_test.dir/build.make test/CMakeFiles/Selectable_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 61%] Building CXX object test/CMakeFiles/Selectable_test.dir/Selectable_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/Selectable_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Selectable_test.dir/Selectable_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/Selectable_test_autogen/mocs_compilation.cpp
[ 61%] Building CXX object test/CMakeFiles/Selectable_test.dir/Selectable_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/Selectable_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Selectable_test.dir/Selectable_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Selectable_test.C
[ 61%] Linking CXX executable ../bin/TEST/Selectable_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/Selectable_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Selectable_test.dir/Selectable_test_autogen/mocs_compilation.cpp.o CMakeFiles/Selectable_test.dir/Selectable_test.C.o -o ../bin/TEST/Selectable_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 61%] Built target Selectable_test
make  -f test/CMakeFiles/HashGrid3DataItem_test_autogen.dir/build.make test/CMakeFiles/HashGrid3DataItem_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/HashGrid3DataItem_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target HashGrid3DataItem_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/HashGrid3DataItem_test_autogen.dir/build.make test/CMakeFiles/HashGrid3DataItem_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 61%] Automatic MOC for target HashGrid3DataItem_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/HashGrid3DataItem_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 61%] Built target HashGrid3DataItem_test_autogen
make  -f test/CMakeFiles/HashGrid3DataItem_test.dir/build.make test/CMakeFiles/HashGrid3DataItem_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/HashGrid3DataItem_test.dir/DependInfo.cmake --color=
Scanning dependencies of target HashGrid3DataItem_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/HashGrid3DataItem_test.dir/build.make test/CMakeFiles/HashGrid3DataItem_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 61%] Building CXX object test/CMakeFiles/HashGrid3DataItem_test.dir/HashGrid3DataItem_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/HashGrid3DataItem_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/HashGrid3DataItem_test.dir/HashGrid3DataItem_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/HashGrid3DataItem_test_autogen/mocs_compilation.cpp
[ 61%] Building CXX object test/CMakeFiles/HashGrid3DataItem_test.dir/HashGrid3DataItem_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/HashGrid3DataItem_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/HashGrid3DataItem_test.dir/HashGrid3DataItem_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/HashGrid3DataItem_test.C
[ 61%] Linking CXX executable ../bin/TEST/HashGrid3DataItem_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/HashGrid3DataItem_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/HashGrid3DataItem_test.dir/HashGrid3DataItem_test_autogen/mocs_compilation.cpp.o CMakeFiles/HashGrid3DataItem_test.dir/HashGrid3DataItem_test.C.o -o ../bin/TEST/HashGrid3DataItem_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 61%] Built target HashGrid3DataItem_test
make  -f test/CMakeFiles/PiecewisePolynomial_test_autogen.dir/build.make test/CMakeFiles/PiecewisePolynomial_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/PiecewisePolynomial_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target PiecewisePolynomial_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/PiecewisePolynomial_test_autogen.dir/build.make test/CMakeFiles/PiecewisePolynomial_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 61%] Automatic MOC for target PiecewisePolynomial_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/PiecewisePolynomial_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 61%] Built target PiecewisePolynomial_test_autogen
make  -f test/CMakeFiles/PiecewisePolynomial_test.dir/build.make test/CMakeFiles/PiecewisePolynomial_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/PiecewisePolynomial_test.dir/DependInfo.cmake --color=
Scanning dependencies of target PiecewisePolynomial_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/PiecewisePolynomial_test.dir/build.make test/CMakeFiles/PiecewisePolynomial_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 61%] Building CXX object test/CMakeFiles/PiecewisePolynomial_test.dir/PiecewisePolynomial_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/PiecewisePolynomial_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/PiecewisePolynomial_test.dir/PiecewisePolynomial_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/PiecewisePolynomial_test_autogen/mocs_compilation.cpp
[ 61%] Building CXX object test/CMakeFiles/PiecewisePolynomial_test.dir/PiecewisePolynomial_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/PiecewisePolynomial_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/PiecewisePolynomial_test.dir/PiecewisePolynomial_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/PiecewisePolynomial_test.C
[ 61%] Linking CXX executable ../bin/TEST/PiecewisePolynomial_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/PiecewisePolynomial_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/PiecewisePolynomial_test.dir/PiecewisePolynomial_test_autogen/mocs_compilation.cpp.o CMakeFiles/PiecewisePolynomial_test.dir/PiecewisePolynomial_test.C.o -o ../bin/TEST/PiecewisePolynomial_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 61%] Built target PiecewisePolynomial_test
make  -f test/CMakeFiles/SolventParameter_test_autogen.dir/build.make test/CMakeFiles/SolventParameter_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/SolventParameter_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target SolventParameter_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/SolventParameter_test_autogen.dir/build.make test/CMakeFiles/SolventParameter_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 61%] Automatic MOC for target SolventParameter_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/SolventParameter_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 61%] Built target SolventParameter_test_autogen
make  -f test/CMakeFiles/SolventParameter_test.dir/build.make test/CMakeFiles/SolventParameter_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/SolventParameter_test.dir/DependInfo.cmake --color=
Scanning dependencies of target SolventParameter_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/SolventParameter_test.dir/build.make test/CMakeFiles/SolventParameter_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 61%] Building CXX object test/CMakeFiles/SolventParameter_test.dir/SolventParameter_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/SolventParameter_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/SolventParameter_test.dir/SolventParameter_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/SolventParameter_test_autogen/mocs_compilation.cpp
[ 63%] Building CXX object test/CMakeFiles/SolventParameter_test.dir/SolventParameter_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/SolventParameter_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/SolventParameter_test.dir/SolventParameter_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/SolventParameter_test.C
[ 63%] Linking CXX executable ../bin/TEST/SolventParameter_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/SolventParameter_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/SolventParameter_test.dir/SolventParameter_test_autogen/mocs_compilation.cpp.o CMakeFiles/SolventParameter_test.dir/SolventParameter_test.C.o -o ../bin/TEST/SolventParameter_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 63%] Built target SolventParameter_test
make  -f test/CMakeFiles/PersistenceManager_test_autogen.dir/build.make test/CMakeFiles/PersistenceManager_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/PersistenceManager_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target PersistenceManager_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/PersistenceManager_test_autogen.dir/build.make test/CMakeFiles/PersistenceManager_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 63%] Automatic MOC for target PersistenceManager_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/PersistenceManager_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 63%] Built target PersistenceManager_test_autogen
make  -f test/CMakeFiles/PersistenceManager_test.dir/build.make test/CMakeFiles/PersistenceManager_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/PersistenceManager_test.dir/DependInfo.cmake --color=
Scanning dependencies of target PersistenceManager_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/PersistenceManager_test.dir/build.make test/CMakeFiles/PersistenceManager_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 63%] Building CXX object test/CMakeFiles/PersistenceManager_test.dir/PersistenceManager_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/PersistenceManager_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/PersistenceManager_test.dir/PersistenceManager_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/PersistenceManager_test_autogen/mocs_compilation.cpp
[ 63%] Building CXX object test/CMakeFiles/PersistenceManager_test.dir/PersistenceManager_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/PersistenceManager_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/PersistenceManager_test.dir/PersistenceManager_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/PersistenceManager_test.C
[ 63%] Linking CXX executable ../bin/TEST/PersistenceManager_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/PersistenceManager_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/PersistenceManager_test.dir/PersistenceManager_test_autogen/mocs_compilation.cpp.o CMakeFiles/PersistenceManager_test.dir/PersistenceManager_test.C.o -o ../bin/TEST/PersistenceManager_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 63%] Built target PersistenceManager_test
make  -f test/CMakeFiles/DockResultFile_test_autogen.dir/build.make test/CMakeFiles/DockResultFile_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/DockResultFile_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target DockResultFile_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/DockResultFile_test_autogen.dir/build.make test/CMakeFiles/DockResultFile_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 63%] Automatic MOC for target DockResultFile_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/DockResultFile_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 63%] Built target DockResultFile_test_autogen
make  -f test/CMakeFiles/DockResultFile_test.dir/build.make test/CMakeFiles/DockResultFile_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/DockResultFile_test.dir/DependInfo.cmake --color=
Scanning dependencies of target DockResultFile_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/DockResultFile_test.dir/build.make test/CMakeFiles/DockResultFile_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 63%] Building CXX object test/CMakeFiles/DockResultFile_test.dir/DockResultFile_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/DockResultFile_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/DockResultFile_test.dir/DockResultFile_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/DockResultFile_test_autogen/mocs_compilation.cpp
[ 63%] Building CXX object test/CMakeFiles/DockResultFile_test.dir/DockResultFile_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/DockResultFile_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/DockResultFile_test.dir/DockResultFile_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/DockResultFile_test.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/secondaryStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBdefs.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/dockResultFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/DockResultFile_test.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/dockResultFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/DockResultFile_test.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/secondaryStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBdefs.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/dockResultFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/DockResultFile_test.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/dockResultFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/DockResultFile_test.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/secondaryStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBdefs.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/dockResultFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/DockResultFile_test.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/dockResultFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/DockResultFile_test.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/flexibleMolecule.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/receptor.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/result.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/dockResultFile.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/DockResultFile_test.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/DockResultFile_test.C: In function 'bool compareMolecules(BALL::Molecule&, BALL::Molecule&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:64:49: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   64 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/DockResultFile_test.C:42:2: note: in expansion of macro 'BALL_FOREACH_ATOM'
   42 |  BALL_FOREACH_ATOM(mol1, ai)
      |  ^~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/dockResultFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/DockResultFile_test.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/flexibleMolecule.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/receptor.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/result.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/dockResultFile.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/DockResultFile_test.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/DockResultFile_test.C: In function 'bool compareMolecules(BALL::Molecule&, BALL::Molecule&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:64:49: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' first required here
   64 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/DockResultFile_test.C:42:2: note: in expansion of macro 'BALL_FOREACH_ATOM'
   42 |  BALL_FOREACH_ATOM(mol1, ai)
      |  ^~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:64:49: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   64 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/DockResultFile_test.C:50:2: note: in expansion of macro 'BALL_FOREACH_ATOM'
   50 |  BALL_FOREACH_ATOM(mol2, ai)
      |  ^~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/dockResultFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/DockResultFile_test.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/flexibleMolecule.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/receptor.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/result.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/dockResultFile.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/DockResultFile_test.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:108:49: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  108 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/DockResultFile_test.C:73:2: note: in expansion of macro 'BALL_FOREACH_BOND'
   73 |  BALL_FOREACH_BOND(mol1, ai, bi)
      |  ^~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/dockResultFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/DockResultFile_test.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/flexibleMolecule.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/receptor.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/result.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/dockResultFile.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/DockResultFile_test.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:110:51: warning: implicitly-declared 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  110 |   for (bond_iterator = (*atom_iterator).beginBond(); \
      |                                                   ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/DockResultFile_test.C:73:2: note: in expansion of macro 'BALL_FOREACH_BOND'
   73 |  BALL_FOREACH_BOND(mol1, ai, bi)
      |  ^~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBdefs.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/dockResultFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/DockResultFile_test.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:437:15: note: because 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::RandomAccessIterator<Container, DataType, Position, Traits>::RandomAccessIterator(const BALL::RandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
  437 |   BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:413:8: warning: implicitly-declared 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  413 |  class RandomAccessIterator
      |        ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:47:15: note: because 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   47 |   BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:24:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   24 |  class ConstRandomAccessIterator
      |        ^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/dockResultFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/DockResultFile_test.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBdefs.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/dockResultFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/DockResultFile_test.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:413:8: note: synthesized method 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' first required here
  413 |  class RandomAccessIterator
      |        ^~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/flexibleMolecule.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/receptor.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/result.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/dockResultFile.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/DockResultFile_test.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/DockResultFile_test.C: In function 'bool compareMolecules(BALL::Molecule&, BALL::Molecule&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:110:51: note: synthesized method 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' first required here
  110 |   for (bond_iterator = (*atom_iterator).beginBond(); \
      |                                                   ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/DockResultFile_test.C:73:2: note: in expansion of macro 'BALL_FOREACH_BOND'
   73 |  BALL_FOREACH_BOND(mol1, ai, bi)
      |  ^~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:108:49: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  108 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/DockResultFile_test.C:83:2: note: in expansion of macro 'BALL_FOREACH_BOND'
   83 |  BALL_FOREACH_BOND(mol2, ai, bi)
      |  ^~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/dockResultFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/DockResultFile_test.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/flexibleMolecule.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/receptor.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/result.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/dockResultFile.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/DockResultFile_test.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:110:51: warning: implicitly-declared 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  110 |   for (bond_iterator = (*atom_iterator).beginBond(); \
      |                                                   ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/DockResultFile_test.C:83:2: note: in expansion of macro 'BALL_FOREACH_BOND'
   83 |  BALL_FOREACH_BOND(mol2, ai, bi)
      |  ^~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBdefs.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/dockResultFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/DockResultFile_test.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:437:15: note: because 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::RandomAccessIterator<Container, DataType, Position, Traits>::RandomAccessIterator(const BALL::RandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
  437 |   BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~
[ 63%] Linking CXX executable ../bin/TEST/DockResultFile_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/DockResultFile_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/DockResultFile_test.dir/DockResultFile_test_autogen/mocs_compilation.cpp.o CMakeFiles/DockResultFile_test.dir/DockResultFile_test.C.o -o ../bin/TEST/DockResultFile_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 63%] Built target DockResultFile_test
make  -f test/CMakeFiles/Composite_test1_autogen.dir/build.make test/CMakeFiles/Composite_test1_autogen.dir/depend
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cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/Composite_test1_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target Composite_test1_autogen
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make  -f test/CMakeFiles/Composite_test1_autogen.dir/build.make test/CMakeFiles/Composite_test1_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 63%] Automatic MOC for target Composite_test1
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/Composite_test1_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 63%] Built target Composite_test1_autogen
make  -f test/CMakeFiles/Composite_test1.dir/build.make test/CMakeFiles/Composite_test1.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/Composite_test1.dir/DependInfo.cmake --color=
Scanning dependencies of target Composite_test1
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make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 63%] Building CXX object test/CMakeFiles/Composite_test1.dir/Composite_test1_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/Composite_test1_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Composite_test1.dir/Composite_test1_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/Composite_test1_autogen/mocs_compilation.cpp
[ 63%] Building CXX object test/CMakeFiles/Composite_test1.dir/Composite_test1.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/Composite_test1_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Composite_test1.dir/Composite_test1.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Composite_test1.C
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Composite_test1.C: In function 'int main(int, char**)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Composite_test1.C:249:29: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  249 |   sub_it = a.beginComposite();
      |                             ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Composite_test1.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Composite_test1.C: In function 'int main(int, char**)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Composite_test1.C:249:29: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  249 |   sub_it = a.beginComposite();
      |                             ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Composite_test1.C:270:28: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  270 |  sub_it = f.beginComposite();
      |                            ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Composite_test1.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Composite_test1.C:281:28: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  281 |  sub_it = h.beginComposite();
      |                            ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Composite_test1.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 63%] Linking CXX executable ../bin/TEST/Composite_test1
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/Composite_test1.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Composite_test1.dir/Composite_test1_autogen/mocs_compilation.cpp.o CMakeFiles/Composite_test1.dir/Composite_test1.C.o -o ../bin/TEST/Composite_test1  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 63%] Built target Composite_test1
make  -f test/CMakeFiles/PersistentObject_test_autogen.dir/build.make test/CMakeFiles/PersistentObject_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/PersistentObject_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target PersistentObject_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/PersistentObject_test_autogen.dir/build.make test/CMakeFiles/PersistentObject_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 63%] Automatic MOC for target PersistentObject_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/PersistentObject_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 63%] Built target PersistentObject_test_autogen
make  -f test/CMakeFiles/PersistentObject_test.dir/build.make test/CMakeFiles/PersistentObject_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/PersistentObject_test.dir/DependInfo.cmake --color=
Scanning dependencies of target PersistentObject_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/PersistentObject_test.dir/build.make test/CMakeFiles/PersistentObject_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 63%] Building CXX object test/CMakeFiles/PersistentObject_test.dir/PersistentObject_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/PersistentObject_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/PersistentObject_test.dir/PersistentObject_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/PersistentObject_test_autogen/mocs_compilation.cpp
[ 63%] Building CXX object test/CMakeFiles/PersistentObject_test.dir/PersistentObject_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/PersistentObject_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/PersistentObject_test.dir/PersistentObject_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/PersistentObject_test.C
[ 63%] Linking CXX executable ../bin/TEST/PersistentObject_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/PersistentObject_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/PersistentObject_test.dir/PersistentObject_test_autogen/mocs_compilation.cpp.o CMakeFiles/PersistentObject_test.dir/PersistentObject_test.C.o -o ../bin/TEST/PersistentObject_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 63%] Built target PersistentObject_test
make  -f test/CMakeFiles/GenericMolFile_test_autogen.dir/build.make test/CMakeFiles/GenericMolFile_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/GenericMolFile_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target GenericMolFile_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/GenericMolFile_test_autogen.dir/build.make test/CMakeFiles/GenericMolFile_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 63%] Automatic MOC for target GenericMolFile_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/GenericMolFile_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 63%] Built target GenericMolFile_test_autogen
make  -f test/CMakeFiles/GenericMolFile_test.dir/build.make test/CMakeFiles/GenericMolFile_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/GenericMolFile_test.dir/DependInfo.cmake --color=
Scanning dependencies of target GenericMolFile_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/GenericMolFile_test.dir/build.make test/CMakeFiles/GenericMolFile_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 63%] Building CXX object test/CMakeFiles/GenericMolFile_test.dir/GenericMolFile_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/GenericMolFile_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/GenericMolFile_test.dir/GenericMolFile_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/GenericMolFile_test_autogen/mocs_compilation.cpp
[ 63%] Building CXX object test/CMakeFiles/GenericMolFile_test.dir/GenericMolFile_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/GenericMolFile_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/GenericMolFile_test.dir/GenericMolFile_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/GenericMolFile_test.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/GenericMolFile_test.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/GenericMolFile_test.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/GenericMolFile_test.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/GenericMolFile_test.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/GenericMolFile_test.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/GenericMolFile_test.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 63%] Linking CXX executable ../bin/TEST/GenericMolFile_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/GenericMolFile_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/GenericMolFile_test.dir/GenericMolFile_test_autogen/mocs_compilation.cpp.o CMakeFiles/GenericMolFile_test.dir/GenericMolFile_test.C.o -o ../bin/TEST/GenericMolFile_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 63%] Built target GenericMolFile_test
make  -f test/CMakeFiles/TrajectoryFile_test_autogen.dir/build.make test/CMakeFiles/TrajectoryFile_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/TrajectoryFile_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target TrajectoryFile_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/TrajectoryFile_test_autogen.dir/build.make test/CMakeFiles/TrajectoryFile_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 63%] Automatic MOC for target TrajectoryFile_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/TrajectoryFile_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 63%] Built target TrajectoryFile_test_autogen
make  -f test/CMakeFiles/TrajectoryFile_test.dir/build.make test/CMakeFiles/TrajectoryFile_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/TrajectoryFile_test.dir/DependInfo.cmake --color=
Scanning dependencies of target TrajectoryFile_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/TrajectoryFile_test.dir/build.make test/CMakeFiles/TrajectoryFile_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 63%] Building CXX object test/CMakeFiles/TrajectoryFile_test.dir/TrajectoryFile_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/TrajectoryFile_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/TrajectoryFile_test.dir/TrajectoryFile_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/TrajectoryFile_test_autogen/mocs_compilation.cpp
[ 63%] Building CXX object test/CMakeFiles/TrajectoryFile_test.dir/TrajectoryFile_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/TrajectoryFile_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/TrajectoryFile_test.dir/TrajectoryFile_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/TrajectoryFile_test.C
[ 63%] Linking CXX executable ../bin/TEST/TrajectoryFile_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/TrajectoryFile_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/TrajectoryFile_test.dir/TrajectoryFile_test_autogen/mocs_compilation.cpp.o CMakeFiles/TrajectoryFile_test.dir/TrajectoryFile_test.C.o -o ../bin/TEST/TrajectoryFile_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 63%] Built target TrajectoryFile_test
make  -f test/CMakeFiles/StrangLBFGSMinimizer_test_autogen.dir/build.make test/CMakeFiles/StrangLBFGSMinimizer_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/StrangLBFGSMinimizer_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target StrangLBFGSMinimizer_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/StrangLBFGSMinimizer_test_autogen.dir/build.make test/CMakeFiles/StrangLBFGSMinimizer_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 63%] Automatic MOC for target StrangLBFGSMinimizer_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/StrangLBFGSMinimizer_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 63%] Built target StrangLBFGSMinimizer_test_autogen
make  -f test/CMakeFiles/StrangLBFGSMinimizer_test.dir/build.make test/CMakeFiles/StrangLBFGSMinimizer_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/StrangLBFGSMinimizer_test.dir/DependInfo.cmake --color=
Scanning dependencies of target StrangLBFGSMinimizer_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/StrangLBFGSMinimizer_test.dir/build.make test/CMakeFiles/StrangLBFGSMinimizer_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 63%] Building CXX object test/CMakeFiles/StrangLBFGSMinimizer_test.dir/StrangLBFGSMinimizer_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/StrangLBFGSMinimizer_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/StrangLBFGSMinimizer_test.dir/StrangLBFGSMinimizer_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/StrangLBFGSMinimizer_test_autogen/mocs_compilation.cpp
[ 63%] Building CXX object test/CMakeFiles/StrangLBFGSMinimizer_test.dir/StrangLBFGSMinimizer_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/StrangLBFGSMinimizer_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/StrangLBFGSMinimizer_test.dir/StrangLBFGSMinimizer_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/StrangLBFGSMinimizer_test.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceField.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/AMBER/amber.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/StrangLBFGSMinimizer_test.C:13:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MINIMIZATION/energyMinimizer.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MINIMIZATION/strangLBFGS.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/StrangLBFGSMinimizer_test.C:12:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceField.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/AMBER/amber.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/StrangLBFGSMinimizer_test.C:13:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MINIMIZATION/energyMinimizer.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MINIMIZATION/strangLBFGS.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/StrangLBFGSMinimizer_test.C:12:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceField.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/AMBER/amber.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/StrangLBFGSMinimizer_test.C:13:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MINIMIZATION/energyMinimizer.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MINIMIZATION/strangLBFGS.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/StrangLBFGSMinimizer_test.C:12:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/StrangLBFGSMinimizer_test.C: In function 'int main(int, char**)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/StrangLBFGSMinimizer_test.C:427:26: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  427 |  for (atit = S.beginAtom(); +atit; ++atit)
      |                          ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MINIMIZATION/energyMinimizer.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MINIMIZATION/strangLBFGS.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/StrangLBFGSMinimizer_test.C:12:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/StrangLBFGSMinimizer_test.C: In function 'int main(int, char**)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/StrangLBFGSMinimizer_test.C:427:26: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' first required here
  427 |  for (atit = S.beginAtom(); +atit; ++atit)
      |                          ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/StrangLBFGSMinimizer_test.C:496:26: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  496 |  for (atit = S.beginAtom(); +atit; ++atit)
      |                          ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MINIMIZATION/energyMinimizer.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MINIMIZATION/strangLBFGS.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/StrangLBFGSMinimizer_test.C:12:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 63%] Linking CXX executable ../bin/TEST/StrangLBFGSMinimizer_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/StrangLBFGSMinimizer_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/StrangLBFGSMinimizer_test.dir/StrangLBFGSMinimizer_test_autogen/mocs_compilation.cpp.o CMakeFiles/StrangLBFGSMinimizer_test.dir/StrangLBFGSMinimizer_test.C.o -o ../bin/TEST/StrangLBFGSMinimizer_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 63%] Built target StrangLBFGSMinimizer_test
make  -f test/CMakeFiles/RegularData2D_test2_autogen.dir/build.make test/CMakeFiles/RegularData2D_test2_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/RegularData2D_test2_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target RegularData2D_test2_autogen
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make  -f test/CMakeFiles/RegularData2D_test2_autogen.dir/build.make test/CMakeFiles/RegularData2D_test2_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 63%] Automatic MOC for target RegularData2D_test2
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/RegularData2D_test2_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
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make  -f test/CMakeFiles/RegularData2D_test2.dir/build.make test/CMakeFiles/RegularData2D_test2.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/RegularData2D_test2.dir/DependInfo.cmake --color=
Scanning dependencies of target RegularData2D_test2
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make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 63%] Building CXX object test/CMakeFiles/RegularData2D_test2.dir/RegularData2D_test2_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/RegularData2D_test2_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/RegularData2D_test2.dir/RegularData2D_test2_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/RegularData2D_test2_autogen/mocs_compilation.cpp
[ 63%] Building CXX object test/CMakeFiles/RegularData2D_test2.dir/RegularData2D_test2.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/RegularData2D_test2_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/RegularData2D_test2.dir/RegularData2D_test2.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/RegularData2D_test2.C
[ 63%] Linking CXX executable ../bin/TEST/RegularData2D_test2
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/RegularData2D_test2.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/RegularData2D_test2.dir/RegularData2D_test2_autogen/mocs_compilation.cpp.o CMakeFiles/RegularData2D_test2.dir/RegularData2D_test2.C.o -o ../bin/TEST/RegularData2D_test2  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
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cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/ConformationSet_test_autogen.dir/DependInfo.cmake --color=
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make  -f test/CMakeFiles/ConformationSet_test.dir/build.make test/CMakeFiles/ConformationSet_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/ConformationSet_test.dir/DependInfo.cmake --color=
Scanning dependencies of target ConformationSet_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/ConformationSet_test.dir/build.make test/CMakeFiles/ConformationSet_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 63%] Building CXX object test/CMakeFiles/ConformationSet_test.dir/ConformationSet_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/ConformationSet_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/ConformationSet_test.dir/ConformationSet_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/ConformationSet_test_autogen/mocs_compilation.cpp
[ 63%] Building CXX object test/CMakeFiles/ConformationSet_test.dir/ConformationSet_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/ConformationSet_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/ConformationSet_test.dir/ConformationSet_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ConformationSet_test.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/conformationSet.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ConformationSet_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/conformationSet.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ConformationSet_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/conformationSet.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ConformationSet_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/conformationSet.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ConformationSet_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/conformationSet.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ConformationSet_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/conformationSet.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ConformationSet_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 63%] Linking CXX executable ../bin/TEST/ConformationSet_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/ConformationSet_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/ConformationSet_test.dir/ConformationSet_test_autogen/mocs_compilation.cpp.o CMakeFiles/ConformationSet_test.dir/ConformationSet_test.C.o -o ../bin/TEST/ConformationSet_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 63%] Built target ConformationSet_test
make  -f test/CMakeFiles/PDBFile_test_autogen.dir/build.make test/CMakeFiles/PDBFile_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/PDBFile_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target PDBFile_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/PDBFile_test_autogen.dir/build.make test/CMakeFiles/PDBFile_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 63%] Automatic MOC for target PDBFile_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/PDBFile_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 63%] Built target PDBFile_test_autogen
make  -f test/CMakeFiles/PDBFile_test.dir/build.make test/CMakeFiles/PDBFile_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/PDBFile_test.dir/DependInfo.cmake --color=
Scanning dependencies of target PDBFile_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/PDBFile_test.dir/build.make test/CMakeFiles/PDBFile_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 63%] Building CXX object test/CMakeFiles/PDBFile_test.dir/PDBFile_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/PDBFile_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/PDBFile_test.dir/PDBFile_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/PDBFile_test_autogen/mocs_compilation.cpp
[ 63%] Building CXX object test/CMakeFiles/PDBFile_test.dir/PDBFile_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/PDBFile_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/PDBFile_test.dir/PDBFile_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/PDBFile_test.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/secondaryStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBdefs.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/PDBFile_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/PDBFile_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/secondaryStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBdefs.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/PDBFile_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/PDBFile_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/secondaryStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBdefs.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/PDBFile_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/PDBFile_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 63%] Linking CXX executable ../bin/TEST/PDBFile_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/PDBFile_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/PDBFile_test.dir/PDBFile_test_autogen/mocs_compilation.cpp.o CMakeFiles/PDBFile_test.dir/PDBFile_test.C.o -o ../bin/TEST/PDBFile_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 63%] Built target PDBFile_test
make  -f test/CMakeFiles/AtomBijection_test_autogen.dir/build.make test/CMakeFiles/AtomBijection_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/AtomBijection_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target AtomBijection_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/AtomBijection_test_autogen.dir/build.make test/CMakeFiles/AtomBijection_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 63%] Automatic MOC for target AtomBijection_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/AtomBijection_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 63%] Built target AtomBijection_test_autogen
make  -f test/CMakeFiles/AtomBijection_test.dir/build.make test/CMakeFiles/AtomBijection_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/AtomBijection_test.dir/DependInfo.cmake --color=
Scanning dependencies of target AtomBijection_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/AtomBijection_test.dir/build.make test/CMakeFiles/AtomBijection_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 63%] Building CXX object test/CMakeFiles/AtomBijection_test.dir/AtomBijection_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/AtomBijection_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/AtomBijection_test.dir/AtomBijection_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/AtomBijection_test_autogen/mocs_compilation.cpp
[ 63%] Building CXX object test/CMakeFiles/AtomBijection_test.dir/AtomBijection_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/AtomBijection_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/AtomBijection_test.dir/AtomBijection_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AtomBijection_test.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/atomBijection.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AtomBijection_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/atomBijection.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AtomBijection_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/atomBijection.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AtomBijection_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/atomBijection.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AtomBijection_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/atomBijection.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AtomBijection_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/atomBijection.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AtomBijection_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 63%] Linking CXX executable ../bin/TEST/AtomBijection_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/AtomBijection_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/AtomBijection_test.dir/AtomBijection_test_autogen/mocs_compilation.cpp.o CMakeFiles/AtomBijection_test.dir/AtomBijection_test.C.o -o ../bin/TEST/AtomBijection_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 63%] Built target AtomBijection_test
make  -f test/CMakeFiles/RegularData1D_test1_autogen.dir/build.make test/CMakeFiles/RegularData1D_test1_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/RegularData1D_test1_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target RegularData1D_test1_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/RegularData1D_test1_autogen.dir/build.make test/CMakeFiles/RegularData1D_test1_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 63%] Automatic MOC for target RegularData1D_test1
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/RegularData1D_test1_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 63%] Built target RegularData1D_test1_autogen
make  -f test/CMakeFiles/RegularData1D_test1.dir/build.make test/CMakeFiles/RegularData1D_test1.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/RegularData1D_test1.dir/DependInfo.cmake --color=
Scanning dependencies of target RegularData1D_test1
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/RegularData1D_test1.dir/build.make test/CMakeFiles/RegularData1D_test1.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 63%] Building CXX object test/CMakeFiles/RegularData1D_test1.dir/RegularData1D_test1_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/RegularData1D_test1_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/RegularData1D_test1.dir/RegularData1D_test1_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/RegularData1D_test1_autogen/mocs_compilation.cpp
[ 63%] Building CXX object test/CMakeFiles/RegularData1D_test1.dir/RegularData1D_test1.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/RegularData1D_test1_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/RegularData1D_test1.dir/RegularData1D_test1.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/RegularData1D_test1.C
[ 63%] Linking CXX executable ../bin/TEST/RegularData1D_test1
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/RegularData1D_test1.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/RegularData1D_test1.dir/RegularData1D_test1_autogen/mocs_compilation.cpp.o CMakeFiles/RegularData1D_test1.dir/RegularData1D_test1.C.o -o ../bin/TEST/RegularData1D_test1  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 63%] Built target RegularData1D_test1
make  -f test/CMakeFiles/MathsCommon_test_autogen.dir/build.make test/CMakeFiles/MathsCommon_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/MathsCommon_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target MathsCommon_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/MathsCommon_test_autogen.dir/build.make test/CMakeFiles/MathsCommon_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 63%] Automatic MOC for target MathsCommon_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/MathsCommon_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 63%] Built target MathsCommon_test_autogen
make  -f test/CMakeFiles/MathsCommon_test.dir/build.make test/CMakeFiles/MathsCommon_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/MathsCommon_test.dir/DependInfo.cmake --color=
Scanning dependencies of target MathsCommon_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/MathsCommon_test.dir/build.make test/CMakeFiles/MathsCommon_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 63%] Building CXX object test/CMakeFiles/MathsCommon_test.dir/MathsCommon_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/MathsCommon_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/MathsCommon_test.dir/MathsCommon_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/MathsCommon_test_autogen/mocs_compilation.cpp
[ 63%] Building CXX object test/CMakeFiles/MathsCommon_test.dir/MathsCommon_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/MathsCommon_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/MathsCommon_test.dir/MathsCommon_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/MathsCommon_test.C
[ 64%] Linking CXX executable ../bin/TEST/MathsCommon_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/MathsCommon_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/MathsCommon_test.dir/MathsCommon_test_autogen/mocs_compilation.cpp.o CMakeFiles/MathsCommon_test.dir/MathsCommon_test.C.o -o ../bin/TEST/MathsCommon_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 64%] Built target MathsCommon_test
make  -f test/CMakeFiles/HashGridBox3_test_autogen.dir/build.make test/CMakeFiles/HashGridBox3_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/HashGridBox3_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target HashGridBox3_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/HashGridBox3_test_autogen.dir/build.make test/CMakeFiles/HashGridBox3_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 64%] Automatic MOC for target HashGridBox3_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/HashGridBox3_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 64%] Built target HashGridBox3_test_autogen
make  -f test/CMakeFiles/HashGridBox3_test.dir/build.make test/CMakeFiles/HashGridBox3_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/HashGridBox3_test.dir/DependInfo.cmake --color=
Scanning dependencies of target HashGridBox3_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/HashGridBox3_test.dir/build.make test/CMakeFiles/HashGridBox3_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 64%] Building CXX object test/CMakeFiles/HashGridBox3_test.dir/HashGridBox3_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/HashGridBox3_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/HashGridBox3_test.dir/HashGridBox3_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/HashGridBox3_test_autogen/mocs_compilation.cpp
[ 64%] Building CXX object test/CMakeFiles/HashGridBox3_test.dir/HashGridBox3_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/HashGridBox3_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/HashGridBox3_test.dir/HashGridBox3_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/HashGridBox3_test.C
[ 64%] Linking CXX executable ../bin/TEST/HashGridBox3_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/HashGridBox3_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/HashGridBox3_test.dir/HashGridBox3_test_autogen/mocs_compilation.cpp.o CMakeFiles/HashGridBox3_test.dir/HashGridBox3_test.C.o -o ../bin/TEST/HashGridBox3_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 64%] Built target HashGridBox3_test
make  -f test/CMakeFiles/String_test8_autogen.dir/build.make test/CMakeFiles/String_test8_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/String_test8_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target String_test8_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
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make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 64%] Automatic MOC for target String_test8
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/String_test8_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 64%] Built target String_test8_autogen
make  -f test/CMakeFiles/String_test8.dir/build.make test/CMakeFiles/String_test8.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/String_test8.dir/DependInfo.cmake --color=
Scanning dependencies of target String_test8
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make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 64%] Building CXX object test/CMakeFiles/String_test8.dir/String_test8_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/String_test8_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/String_test8.dir/String_test8_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/String_test8_autogen/mocs_compilation.cpp
[ 64%] Building CXX object test/CMakeFiles/String_test8.dir/String_test8.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/String_test8_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/String_test8.dir/String_test8.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/String_test8.C
[ 64%] Linking CXX executable ../bin/TEST/String_test8
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/String_test8.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/String_test8.dir/String_test8_autogen/mocs_compilation.cpp.o CMakeFiles/String_test8.dir/String_test8.C.o -o ../bin/TEST/String_test8  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 64%] Built target String_test8
make  -f test/CMakeFiles/String_test6_autogen.dir/build.make test/CMakeFiles/String_test6_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/String_test6_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target String_test6_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/String_test6_autogen.dir/build.make test/CMakeFiles/String_test6_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 65%] Automatic MOC for target String_test6
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/String_test6_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 65%] Built target String_test6_autogen
make  -f test/CMakeFiles/String_test6.dir/build.make test/CMakeFiles/String_test6.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/String_test6.dir/DependInfo.cmake --color=
Scanning dependencies of target String_test6
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
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make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 65%] Building CXX object test/CMakeFiles/String_test6.dir/String_test6_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/String_test6_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/String_test6.dir/String_test6_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/String_test6_autogen/mocs_compilation.cpp
[ 65%] Building CXX object test/CMakeFiles/String_test6.dir/String_test6.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/String_test6_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/String_test6.dir/String_test6.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/String_test6.C
[ 65%] Linking CXX executable ../bin/TEST/String_test6
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/String_test6.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/String_test6.dir/String_test6_autogen/mocs_compilation.cpp.o CMakeFiles/String_test6.dir/String_test6.C.o -o ../bin/TEST/String_test6  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 65%] Built target String_test6
make  -f test/CMakeFiles/SNBModel_test_autogen.dir/build.make test/CMakeFiles/SNBModel_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/SNBModel_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target SNBModel_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/SNBModel_test_autogen.dir/build.make test/CMakeFiles/SNBModel_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 65%] Automatic MOC for target SNBModel_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/SNBModel_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 65%] Built target SNBModel_test_autogen
make  -f test/CMakeFiles/SNBModel_test.dir/build.make test/CMakeFiles/SNBModel_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/SNBModel_test.dir/DependInfo.cmake --color=
Scanning dependencies of target SNBModel_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/SNBModel_test.dir/build.make test/CMakeFiles/SNBModel_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 65%] Building CXX object test/CMakeFiles/SNBModel_test.dir/SNBModel_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/SNBModel_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/SNBModel_test.dir/SNBModel_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/SNBModel_test_autogen/mocs_compilation.cpp
[ 65%] Building CXX object test/CMakeFiles/SNBModel_test.dir/SNBModel_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/SNBModel_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/SNBModel_test.dir/SNBModel_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/SNBModel_test.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/SNBModel_test.C:4:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/SNBModel_test.C:4:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/SNBModel_test.C:4:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/SNBModel_test.C:4:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/SNBModel_test.C:4:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/SNBModel_test.C:4:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 65%] Linking CXX executable ../bin/TEST/SNBModel_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/SNBModel_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/SNBModel_test.dir/SNBModel_test_autogen/mocs_compilation.cpp.o CMakeFiles/SNBModel_test.dir/SNBModel_test.C.o -o ../bin/TEST/SNBModel_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 65%] Built target SNBModel_test
make  -f test/CMakeFiles/Gradient_test_autogen.dir/build.make test/CMakeFiles/Gradient_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/Gradient_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target Gradient_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/Gradient_test_autogen.dir/build.make test/CMakeFiles/Gradient_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 65%] Automatic MOC for target Gradient_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/Gradient_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 65%] Built target Gradient_test_autogen
make  -f test/CMakeFiles/Gradient_test.dir/build.make test/CMakeFiles/Gradient_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/Gradient_test.dir/DependInfo.cmake --color=
Scanning dependencies of target Gradient_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/Gradient_test.dir/build.make test/CMakeFiles/Gradient_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 65%] Building CXX object test/CMakeFiles/Gradient_test.dir/Gradient_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/Gradient_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Gradient_test.dir/Gradient_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/Gradient_test_autogen/mocs_compilation.cpp
[ 65%] Building CXX object test/CMakeFiles/Gradient_test.dir/Gradient_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/Gradient_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Gradient_test.dir/Gradient_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Gradient_test.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Gradient_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/gradient.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Gradient_test.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Gradient_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/gradient.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Gradient_test.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Gradient_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/gradient.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Gradient_test.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 65%] Linking CXX executable ../bin/TEST/Gradient_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/Gradient_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Gradient_test.dir/Gradient_test_autogen/mocs_compilation.cpp.o CMakeFiles/Gradient_test.dir/Gradient_test.C.o -o ../bin/TEST/Gradient_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 65%] Built target Gradient_test
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cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/String_test5_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/String_test5.dir/String_test5_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/String_test5_autogen/mocs_compilation.cpp
[ 65%] Building CXX object test/CMakeFiles/String_test5.dir/String_test5.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/String_test5_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/String_test5.dir/String_test5.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/String_test5.C
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/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/String_test5.dir/String_test5_autogen/mocs_compilation.cpp.o CMakeFiles/String_test5.dir/String_test5.C.o -o ../bin/TEST/String_test5  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
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cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/String_test4_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/String_test4.dir/String_test4_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/String_test4_autogen/mocs_compilation.cpp
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/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/String_test4.dir/String_test4_autogen/mocs_compilation.cpp.o CMakeFiles/String_test4.dir/String_test4.C.o -o ../bin/TEST/String_test4  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
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cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/ExpressionTree_test_autogen.dir/DependInfo.cmake --color=
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[ 65%] Automatic MOC for target ExpressionTree_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/ExpressionTree_test_autogen.dir/AutogenInfo.json Release
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cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/ExpressionTree_test.dir/DependInfo.cmake --color=
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cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/ExpressionTree_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/ExpressionTree_test.dir/ExpressionTree_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/ExpressionTree_test_autogen/mocs_compilation.cpp
[ 65%] Building CXX object test/CMakeFiles/ExpressionTree_test.dir/ExpressionTree_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/ExpressionTree_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/ExpressionTree_test.dir/ExpressionTree_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ExpressionTree_test.C
[ 65%] Linking CXX executable ../bin/TEST/ExpressionTree_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/ExpressionTree_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/ExpressionTree_test.dir/ExpressionTree_test_autogen/mocs_compilation.cpp.o CMakeFiles/ExpressionTree_test.dir/ExpressionTree_test.C.o -o ../bin/TEST/ExpressionTree_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 65%] Built target ExpressionTree_test
make  -f test/CMakeFiles/UhligCavFreeEnergyProcessor_test_autogen.dir/build.make test/CMakeFiles/UhligCavFreeEnergyProcessor_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/UhligCavFreeEnergyProcessor_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target UhligCavFreeEnergyProcessor_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/UhligCavFreeEnergyProcessor_test_autogen.dir/build.make test/CMakeFiles/UhligCavFreeEnergyProcessor_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 65%] Automatic MOC for target UhligCavFreeEnergyProcessor_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/UhligCavFreeEnergyProcessor_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 65%] Built target UhligCavFreeEnergyProcessor_test_autogen
make  -f test/CMakeFiles/UhligCavFreeEnergyProcessor_test.dir/build.make test/CMakeFiles/UhligCavFreeEnergyProcessor_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/UhligCavFreeEnergyProcessor_test.dir/DependInfo.cmake --color=
Scanning dependencies of target UhligCavFreeEnergyProcessor_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/UhligCavFreeEnergyProcessor_test.dir/build.make test/CMakeFiles/UhligCavFreeEnergyProcessor_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 65%] Building CXX object test/CMakeFiles/UhligCavFreeEnergyProcessor_test.dir/UhligCavFreeEnergyProcessor_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/UhligCavFreeEnergyProcessor_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/UhligCavFreeEnergyProcessor_test.dir/UhligCavFreeEnergyProcessor_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/UhligCavFreeEnergyProcessor_test_autogen/mocs_compilation.cpp
[ 65%] Building CXX object test/CMakeFiles/UhligCavFreeEnergyProcessor_test.dir/UhligCavFreeEnergyProcessor_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/UhligCavFreeEnergyProcessor_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/UhligCavFreeEnergyProcessor_test.dir/UhligCavFreeEnergyProcessor_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/UhligCavFreeEnergyProcessor_test.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/ENERGY/energyProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SOLVATION/uhligCavFreeEnergyProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/UhligCavFreeEnergyProcessor_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/ENERGY/energyProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SOLVATION/uhligCavFreeEnergyProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/UhligCavFreeEnergyProcessor_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/ENERGY/energyProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SOLVATION/uhligCavFreeEnergyProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/UhligCavFreeEnergyProcessor_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/ENERGY/energyProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SOLVATION/uhligCavFreeEnergyProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/UhligCavFreeEnergyProcessor_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/ENERGY/energyProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SOLVATION/uhligCavFreeEnergyProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/UhligCavFreeEnergyProcessor_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/ENERGY/energyProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SOLVATION/uhligCavFreeEnergyProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/UhligCavFreeEnergyProcessor_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 65%] Linking CXX executable ../bin/TEST/UhligCavFreeEnergyProcessor_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/UhligCavFreeEnergyProcessor_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/UhligCavFreeEnergyProcessor_test.dir/UhligCavFreeEnergyProcessor_test_autogen/mocs_compilation.cpp.o CMakeFiles/UhligCavFreeEnergyProcessor_test.dir/UhligCavFreeEnergyProcessor_test.C.o -o ../bin/TEST/UhligCavFreeEnergyProcessor_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 65%] Built target UhligCavFreeEnergyProcessor_test
make  -f test/CMakeFiles/PropertyManager_test_autogen.dir/build.make test/CMakeFiles/PropertyManager_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/PropertyManager_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target PropertyManager_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/PropertyManager_test_autogen.dir/build.make test/CMakeFiles/PropertyManager_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 65%] Automatic MOC for target PropertyManager_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/PropertyManager_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 65%] Built target PropertyManager_test_autogen
make  -f test/CMakeFiles/PropertyManager_test.dir/build.make test/CMakeFiles/PropertyManager_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/PropertyManager_test.dir/DependInfo.cmake --color=
Scanning dependencies of target PropertyManager_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/PropertyManager_test.dir/build.make test/CMakeFiles/PropertyManager_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 65%] Building CXX object test/CMakeFiles/PropertyManager_test.dir/PropertyManager_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/PropertyManager_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/PropertyManager_test.dir/PropertyManager_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/PropertyManager_test_autogen/mocs_compilation.cpp
[ 65%] Building CXX object test/CMakeFiles/PropertyManager_test.dir/PropertyManager_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/PropertyManager_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/PropertyManager_test.dir/PropertyManager_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/PropertyManager_test.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chain.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chainIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/protein.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/PropertyManager_test.C:12:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/PropertyManager_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chain.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chainIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/protein.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/PropertyManager_test.C:12:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/PropertyManager_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chain.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chainIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/protein.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/PropertyManager_test.C:12:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/PropertyManager_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 65%] Linking CXX executable ../bin/TEST/PropertyManager_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/PropertyManager_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/PropertyManager_test.dir/PropertyManager_test_autogen/mocs_compilation.cpp.o CMakeFiles/PropertyManager_test.dir/PropertyManager_test.C.o -o ../bin/TEST/PropertyManager_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 65%] Built target PropertyManager_test
make  -f test/CMakeFiles/Plane3_test_autogen.dir/build.make test/CMakeFiles/Plane3_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/Plane3_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target Plane3_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/Plane3_test_autogen.dir/build.make test/CMakeFiles/Plane3_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 65%] Automatic MOC for target Plane3_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/Plane3_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 65%] Built target Plane3_test_autogen
make  -f test/CMakeFiles/Plane3_test.dir/build.make test/CMakeFiles/Plane3_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/Plane3_test.dir/DependInfo.cmake --color=
Scanning dependencies of target Plane3_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/Plane3_test.dir/build.make test/CMakeFiles/Plane3_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 65%] Building CXX object test/CMakeFiles/Plane3_test.dir/Plane3_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/Plane3_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Plane3_test.dir/Plane3_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/Plane3_test_autogen/mocs_compilation.cpp
[ 65%] Building CXX object test/CMakeFiles/Plane3_test.dir/Plane3_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/Plane3_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Plane3_test.dir/Plane3_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Plane3_test.C
[ 65%] Linking CXX executable ../bin/TEST/Plane3_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/Plane3_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Plane3_test.dir/Plane3_test_autogen/mocs_compilation.cpp.o CMakeFiles/Plane3_test.dir/Plane3_test.C.o -o ../bin/TEST/Plane3_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 65%] Built target Plane3_test
make  -f test/CMakeFiles/Chain_test_autogen.dir/build.make test/CMakeFiles/Chain_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/Chain_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target Chain_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/Chain_test_autogen.dir/build.make test/CMakeFiles/Chain_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 65%] Automatic MOC for target Chain_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/Chain_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 65%] Built target Chain_test_autogen
make  -f test/CMakeFiles/Chain_test.dir/build.make test/CMakeFiles/Chain_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/Chain_test.dir/DependInfo.cmake --color=
Scanning dependencies of target Chain_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/Chain_test.dir/build.make test/CMakeFiles/Chain_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 65%] Building CXX object test/CMakeFiles/Chain_test.dir/Chain_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/Chain_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Chain_test.dir/Chain_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/Chain_test_autogen/mocs_compilation.cpp
[ 65%] Building CXX object test/CMakeFiles/Chain_test.dir/Chain_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/Chain_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Chain_test.dir/Chain_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Chain_test.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Chain_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Chain_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Chain_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Chain_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Chain_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Chain_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 65%] Linking CXX executable ../bin/TEST/Chain_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/Chain_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Chain_test.dir/Chain_test_autogen/mocs_compilation.cpp.o CMakeFiles/Chain_test.dir/Chain_test.C.o -o ../bin/TEST/Chain_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 65%] Built target Chain_test
make  -f test/CMakeFiles/ContourSurface_test_autogen.dir/build.make test/CMakeFiles/ContourSurface_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/ContourSurface_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target ContourSurface_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/ContourSurface_test_autogen.dir/build.make test/CMakeFiles/ContourSurface_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 65%] Automatic MOC for target ContourSurface_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/ContourSurface_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 65%] Built target ContourSurface_test_autogen
make  -f test/CMakeFiles/ContourSurface_test.dir/build.make test/CMakeFiles/ContourSurface_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/ContourSurface_test.dir/DependInfo.cmake --color=
Scanning dependencies of target ContourSurface_test
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make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 65%] Building CXX object test/CMakeFiles/ContourSurface_test.dir/ContourSurface_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/ContourSurface_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/ContourSurface_test.dir/ContourSurface_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/ContourSurface_test_autogen/mocs_compilation.cpp
[ 65%] Building CXX object test/CMakeFiles/ContourSurface_test.dir/ContourSurface_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/ContourSurface_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/ContourSurface_test.dir/ContourSurface_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ContourSurface_test.C
[ 65%] Linking CXX executable ../bin/TEST/ContourSurface_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/ContourSurface_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/ContourSurface_test.dir/ContourSurface_test_autogen/mocs_compilation.cpp.o CMakeFiles/ContourSurface_test.dir/ContourSurface_test.C.o -o ../bin/TEST/ContourSurface_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
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make  -f test/CMakeFiles/Hash_test_autogen.dir/build.make test/CMakeFiles/Hash_test_autogen.dir/depend
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cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/Hash_test_autogen.dir/DependInfo.cmake --color=
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[ 65%] Automatic MOC for target Hash_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/Hash_test_autogen.dir/AutogenInfo.json Release
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make  -f test/CMakeFiles/Hash_test.dir/build.make test/CMakeFiles/Hash_test.dir/depend
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cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/Hash_test.dir/DependInfo.cmake --color=
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make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 65%] Building CXX object test/CMakeFiles/Hash_test.dir/Hash_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/Hash_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Hash_test.dir/Hash_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/Hash_test_autogen/mocs_compilation.cpp
[ 65%] Building CXX object test/CMakeFiles/Hash_test.dir/Hash_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/Hash_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Hash_test.dir/Hash_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Hash_test.C
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Hash_test.C: In function 'int main(int, char**)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Hash_test.C:17:11: warning: ISO C++ forbids converting a string constant to 'char*' [-Wwrite-strings]
   17 | char* c = "abcdefghijklmnopqrstuvwxyzABCDEFGHIJKLMNOPQRSTUVWXYZ0123456789";
      |           ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 65%] Linking CXX executable ../bin/TEST/Hash_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/Hash_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Hash_test.dir/Hash_test_autogen/mocs_compilation.cpp.o CMakeFiles/Hash_test.dir/Hash_test.C.o -o ../bin/TEST/Hash_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 65%] Built target Hash_test
make  -f test/CMakeFiles/Box3_test_autogen.dir/build.make test/CMakeFiles/Box3_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/Box3_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target Box3_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/Box3_test_autogen.dir/build.make test/CMakeFiles/Box3_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 65%] Automatic MOC for target Box3_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/Box3_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 65%] Built target Box3_test_autogen
make  -f test/CMakeFiles/Box3_test.dir/build.make test/CMakeFiles/Box3_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/Box3_test.dir/DependInfo.cmake --color=
Scanning dependencies of target Box3_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/Box3_test.dir/build.make test/CMakeFiles/Box3_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 65%] Building CXX object test/CMakeFiles/Box3_test.dir/Box3_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/Box3_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Box3_test.dir/Box3_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/Box3_test_autogen/mocs_compilation.cpp
[ 65%] Building CXX object test/CMakeFiles/Box3_test.dir/Box3_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/Box3_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Box3_test.dir/Box3_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Box3_test.C
[ 65%] Linking CXX executable ../bin/TEST/Box3_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/Box3_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Box3_test.dir/Box3_test_autogen/mocs_compilation.cpp.o CMakeFiles/Box3_test.dir/Box3_test.C.o -o ../bin/TEST/Box3_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 65%] Built target Box3_test
make  -f test/CMakeFiles/Surface_test_autogen.dir/build.make test/CMakeFiles/Surface_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/Surface_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target Surface_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/Surface_test_autogen.dir/build.make test/CMakeFiles/Surface_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 65%] Automatic MOC for target Surface_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/Surface_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 65%] Built target Surface_test_autogen
make  -f test/CMakeFiles/Surface_test.dir/build.make test/CMakeFiles/Surface_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/Surface_test.dir/DependInfo.cmake --color=
Scanning dependencies of target Surface_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/Surface_test.dir/build.make test/CMakeFiles/Surface_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 65%] Building CXX object test/CMakeFiles/Surface_test.dir/Surface_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/Surface_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Surface_test.dir/Surface_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/Surface_test_autogen/mocs_compilation.cpp
[ 65%] Building CXX object test/CMakeFiles/Surface_test.dir/Surface_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/Surface_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Surface_test.dir/Surface_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Surface_test.C
[ 65%] Linking CXX executable ../bin/TEST/Surface_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/Surface_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Surface_test.dir/Surface_test_autogen/mocs_compilation.cpp.o CMakeFiles/Surface_test.dir/Surface_test.C.o -o ../bin/TEST/Surface_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 65%] Built target Surface_test
make  -f test/CMakeFiles/Atom_test2_autogen.dir/build.make test/CMakeFiles/Atom_test2_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/Atom_test2_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target Atom_test2_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/Atom_test2_autogen.dir/build.make test/CMakeFiles/Atom_test2_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 65%] Automatic MOC for target Atom_test2
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/Atom_test2_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 65%] Built target Atom_test2_autogen
make  -f test/CMakeFiles/Atom_test2.dir/build.make test/CMakeFiles/Atom_test2.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/Atom_test2.dir/DependInfo.cmake --color=
Scanning dependencies of target Atom_test2
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/Atom_test2.dir/build.make test/CMakeFiles/Atom_test2.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 65%] Building CXX object test/CMakeFiles/Atom_test2.dir/Atom_test2_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/Atom_test2_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Atom_test2.dir/Atom_test2_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/Atom_test2_autogen/mocs_compilation.cpp
[ 65%] Building CXX object test/CMakeFiles/Atom_test2.dir/Atom_test2.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/Atom_test2_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Atom_test2.dir/Atom_test2.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Atom_test2.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Atom_test2.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Atom_test2.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Atom_test2.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Atom_test2.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Atom_test2.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Atom_test2.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Atom_test2.C: In function 'int main(int, char**)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Atom_test2.C:229:21: warning: implicitly-declared 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  229 |  it = a1->beginBond();
      |                     ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Atom_test2.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:437:15: note: because 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::RandomAccessIterator<Container, DataType, Position, Traits>::RandomAccessIterator(const BALL::RandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
  437 |   BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:413:8: warning: implicitly-declared 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  413 |  class RandomAccessIterator
      |        ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:47:15: note: because 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   47 |   BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:24:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   24 |  class ConstRandomAccessIterator
      |        ^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Atom_test2.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Atom_test2.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:413:8: note: synthesized method 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' first required here
  413 |  class RandomAccessIterator
      |        ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Atom_test2.C: In function 'int main(int, char**)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Atom_test2.C:229:21: note: synthesized method 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' first required here
  229 |  it = a1->beginBond();
      |                     ^
[ 65%] Linking CXX executable ../bin/TEST/Atom_test2
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/Atom_test2.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Atom_test2.dir/Atom_test2_autogen/mocs_compilation.cpp.o CMakeFiles/Atom_test2.dir/Atom_test2.C.o -o ../bin/TEST/Atom_test2  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 65%] Built target Atom_test2
make  -f test/CMakeFiles/GlobalTypes_test_autogen.dir/build.make test/CMakeFiles/GlobalTypes_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/GlobalTypes_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target GlobalTypes_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/GlobalTypes_test_autogen.dir/build.make test/CMakeFiles/GlobalTypes_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 65%] Automatic MOC for target GlobalTypes_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/GlobalTypes_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 65%] Built target GlobalTypes_test_autogen
make  -f test/CMakeFiles/GlobalTypes_test.dir/build.make test/CMakeFiles/GlobalTypes_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/GlobalTypes_test.dir/DependInfo.cmake --color=
Scanning dependencies of target GlobalTypes_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/GlobalTypes_test.dir/build.make test/CMakeFiles/GlobalTypes_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 65%] Building CXX object test/CMakeFiles/GlobalTypes_test.dir/GlobalTypes_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/GlobalTypes_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/GlobalTypes_test.dir/GlobalTypes_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/GlobalTypes_test_autogen/mocs_compilation.cpp
[ 65%] Building CXX object test/CMakeFiles/GlobalTypes_test.dir/GlobalTypes_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/GlobalTypes_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/GlobalTypes_test.dir/GlobalTypes_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/GlobalTypes_test.C
[ 67%] Linking CXX executable ../bin/TEST/GlobalTypes_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/GlobalTypes_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/GlobalTypes_test.dir/GlobalTypes_test_autogen/mocs_compilation.cpp.o CMakeFiles/GlobalTypes_test.dir/GlobalTypes_test.C.o -o ../bin/TEST/GlobalTypes_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 67%] Built target GlobalTypes_test
make  -f test/CMakeFiles/AutoDeletable_test_autogen.dir/build.make test/CMakeFiles/AutoDeletable_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/AutoDeletable_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target AutoDeletable_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/AutoDeletable_test_autogen.dir/build.make test/CMakeFiles/AutoDeletable_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 67%] Automatic MOC for target AutoDeletable_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/AutoDeletable_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 67%] Built target AutoDeletable_test_autogen
make  -f test/CMakeFiles/AutoDeletable_test.dir/build.make test/CMakeFiles/AutoDeletable_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/AutoDeletable_test.dir/DependInfo.cmake --color=
Scanning dependencies of target AutoDeletable_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
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make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 67%] Building CXX object test/CMakeFiles/AutoDeletable_test.dir/AutoDeletable_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/AutoDeletable_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/AutoDeletable_test.dir/AutoDeletable_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/AutoDeletable_test_autogen/mocs_compilation.cpp
[ 67%] Building CXX object test/CMakeFiles/AutoDeletable_test.dir/AutoDeletable_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/AutoDeletable_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/AutoDeletable_test.dir/AutoDeletable_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AutoDeletable_test.C
[ 67%] Linking CXX executable ../bin/TEST/AutoDeletable_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/AutoDeletable_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/AutoDeletable_test.dir/AutoDeletable_test_autogen/mocs_compilation.cpp.o CMakeFiles/AutoDeletable_test.dir/AutoDeletable_test.C.o -o ../bin/TEST/AutoDeletable_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
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make  -f test/CMakeFiles/RegularData2D_test1_autogen.dir/build.make test/CMakeFiles/RegularData2D_test1_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/RegularData2D_test1_autogen.dir/DependInfo.cmake --color=
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make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
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make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 67%] Automatic MOC for target RegularData2D_test1
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/RegularData2D_test1_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 67%] Built target RegularData2D_test1_autogen
make  -f test/CMakeFiles/RegularData2D_test1.dir/build.make test/CMakeFiles/RegularData2D_test1.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/RegularData2D_test1.dir/DependInfo.cmake --color=
Scanning dependencies of target RegularData2D_test1
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/RegularData2D_test1.dir/build.make test/CMakeFiles/RegularData2D_test1.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 67%] Building CXX object test/CMakeFiles/RegularData2D_test1.dir/RegularData2D_test1_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/RegularData2D_test1_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/RegularData2D_test1.dir/RegularData2D_test1_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/RegularData2D_test1_autogen/mocs_compilation.cpp
[ 67%] Building CXX object test/CMakeFiles/RegularData2D_test1.dir/RegularData2D_test1.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/RegularData2D_test1_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/RegularData2D_test1.dir/RegularData2D_test1.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/RegularData2D_test1.C
[ 67%] Linking CXX executable ../bin/TEST/RegularData2D_test1
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/RegularData2D_test1.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/RegularData2D_test1.dir/RegularData2D_test1_autogen/mocs_compilation.cpp.o CMakeFiles/RegularData2D_test1.dir/RegularData2D_test1.C.o -o ../bin/TEST/RegularData2D_test1  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 67%] Built target RegularData2D_test1
make  -f test/CMakeFiles/EFShiftProcessor_test_autogen.dir/build.make test/CMakeFiles/EFShiftProcessor_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/EFShiftProcessor_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target EFShiftProcessor_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/EFShiftProcessor_test_autogen.dir/build.make test/CMakeFiles/EFShiftProcessor_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 67%] Automatic MOC for target EFShiftProcessor_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/EFShiftProcessor_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 67%] Built target EFShiftProcessor_test_autogen
make  -f test/CMakeFiles/EFShiftProcessor_test.dir/build.make test/CMakeFiles/EFShiftProcessor_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/EFShiftProcessor_test.dir/DependInfo.cmake --color=
Scanning dependencies of target EFShiftProcessor_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/EFShiftProcessor_test.dir/build.make test/CMakeFiles/EFShiftProcessor_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 67%] Building CXX object test/CMakeFiles/EFShiftProcessor_test.dir/EFShiftProcessor_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/EFShiftProcessor_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/EFShiftProcessor_test.dir/EFShiftProcessor_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/EFShiftProcessor_test_autogen/mocs_compilation.cpp
[ 67%] Building CXX object test/CMakeFiles/EFShiftProcessor_test.dir/EFShiftProcessor_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/EFShiftProcessor_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/EFShiftProcessor_test.dir/EFShiftProcessor_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/EFShiftProcessor_test.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/shiftModule.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/EFShiftProcessor.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/EFShiftProcessor_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/shiftModule.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/EFShiftProcessor.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/EFShiftProcessor_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/shiftModule.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/EFShiftProcessor.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/EFShiftProcessor_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/shiftModule.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/EFShiftProcessor.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/EFShiftProcessor_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/shiftModule.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/EFShiftProcessor.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/EFShiftProcessor_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/shiftModule.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/EFShiftProcessor.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/EFShiftProcessor_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 67%] Linking CXX executable ../bin/TEST/EFShiftProcessor_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/EFShiftProcessor_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/EFShiftProcessor_test.dir/EFShiftProcessor_test_autogen/mocs_compilation.cpp.o CMakeFiles/EFShiftProcessor_test.dir/EFShiftProcessor_test.C.o -o ../bin/TEST/EFShiftProcessor_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 67%] Built target EFShiftProcessor_test
make  -f test/CMakeFiles/Sphere3_test_autogen.dir/build.make test/CMakeFiles/Sphere3_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/Sphere3_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target Sphere3_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/Sphere3_test_autogen.dir/build.make test/CMakeFiles/Sphere3_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 67%] Automatic MOC for target Sphere3_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/Sphere3_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 67%] Built target Sphere3_test_autogen
make  -f test/CMakeFiles/Sphere3_test.dir/build.make test/CMakeFiles/Sphere3_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/Sphere3_test.dir/DependInfo.cmake --color=
Scanning dependencies of target Sphere3_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/Sphere3_test.dir/build.make test/CMakeFiles/Sphere3_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 67%] Building CXX object test/CMakeFiles/Sphere3_test.dir/Sphere3_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/Sphere3_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Sphere3_test.dir/Sphere3_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/Sphere3_test_autogen/mocs_compilation.cpp
[ 67%] Building CXX object test/CMakeFiles/Sphere3_test.dir/Sphere3_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/Sphere3_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Sphere3_test.dir/Sphere3_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Sphere3_test.C
[ 67%] Linking CXX executable ../bin/TEST/Sphere3_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/Sphere3_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Sphere3_test.dir/Sphere3_test_autogen/mocs_compilation.cpp.o CMakeFiles/Sphere3_test.dir/Sphere3_test.C.o -o ../bin/TEST/Sphere3_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 67%] Built target Sphere3_test
make  -f test/CMakeFiles/RegularExpression_test_autogen.dir/build.make test/CMakeFiles/RegularExpression_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/RegularExpression_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target RegularExpression_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/RegularExpression_test_autogen.dir/build.make test/CMakeFiles/RegularExpression_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 67%] Automatic MOC for target RegularExpression_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/RegularExpression_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 67%] Built target RegularExpression_test_autogen
make  -f test/CMakeFiles/RegularExpression_test.dir/build.make test/CMakeFiles/RegularExpression_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/RegularExpression_test.dir/DependInfo.cmake --color=
Scanning dependencies of target RegularExpression_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/RegularExpression_test.dir/build.make test/CMakeFiles/RegularExpression_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 67%] Building CXX object test/CMakeFiles/RegularExpression_test.dir/RegularExpression_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/RegularExpression_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/RegularExpression_test.dir/RegularExpression_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/RegularExpression_test_autogen/mocs_compilation.cpp
[ 67%] Building CXX object test/CMakeFiles/RegularExpression_test.dir/RegularExpression_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/RegularExpression_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/RegularExpression_test.dir/RegularExpression_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/RegularExpression_test.C
[ 67%] Linking CXX executable ../bin/TEST/RegularExpression_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/RegularExpression_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/RegularExpression_test.dir/RegularExpression_test_autogen/mocs_compilation.cpp.o CMakeFiles/RegularExpression_test.dir/RegularExpression_test.C.o -o ../bin/TEST/RegularExpression_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 67%] Built target RegularExpression_test
make  -f test/CMakeFiles/Vector3_test_autogen.dir/build.make test/CMakeFiles/Vector3_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/Vector3_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target Vector3_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/Vector3_test_autogen.dir/build.make test/CMakeFiles/Vector3_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 67%] Automatic MOC for target Vector3_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/Vector3_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 67%] Built target Vector3_test_autogen
make  -f test/CMakeFiles/Vector3_test.dir/build.make test/CMakeFiles/Vector3_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/Vector3_test.dir/DependInfo.cmake --color=
Scanning dependencies of target Vector3_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/Vector3_test.dir/build.make test/CMakeFiles/Vector3_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 67%] Building CXX object test/CMakeFiles/Vector3_test.dir/Vector3_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/Vector3_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Vector3_test.dir/Vector3_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/Vector3_test_autogen/mocs_compilation.cpp
[ 67%] Building CXX object test/CMakeFiles/Vector3_test.dir/Vector3_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/Vector3_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Vector3_test.dir/Vector3_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Vector3_test.C
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Vector3_test.C: In function 'int main(int, char**)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Vector3_test.C:292:8: warning: variable 'x' set but not used [-Wunused-but-set-variable]
  292 |  float x = 5;
      |        ^
[ 67%] Linking CXX executable ../bin/TEST/Vector3_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/Vector3_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Vector3_test.dir/Vector3_test_autogen/mocs_compilation.cpp.o CMakeFiles/Vector3_test.dir/Vector3_test.C.o -o ../bin/TEST/Vector3_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 67%] Built target Vector3_test
make  -f test/CMakeFiles/SnapShotManager_test_autogen.dir/build.make test/CMakeFiles/SnapShotManager_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/SnapShotManager_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target SnapShotManager_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/SnapShotManager_test_autogen.dir/build.make test/CMakeFiles/SnapShotManager_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 67%] Automatic MOC for target SnapShotManager_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/SnapShotManager_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 67%] Built target SnapShotManager_test_autogen
make  -f test/CMakeFiles/SnapShotManager_test.dir/build.make test/CMakeFiles/SnapShotManager_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/SnapShotManager_test.dir/DependInfo.cmake --color=
Scanning dependencies of target SnapShotManager_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/SnapShotManager_test.dir/build.make test/CMakeFiles/SnapShotManager_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 67%] Building CXX object test/CMakeFiles/SnapShotManager_test.dir/SnapShotManager_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/SnapShotManager_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/SnapShotManager_test.dir/SnapShotManager_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/SnapShotManager_test_autogen/mocs_compilation.cpp
[ 67%] Building CXX object test/CMakeFiles/SnapShotManager_test.dir/SnapShotManager_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/SnapShotManager_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/SnapShotManager_test.dir/SnapShotManager_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/SnapShotManager_test.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/secondaryStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBdefs.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/SnapShotManager_test.C:13:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/snapShot.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/SnapShotManager_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/secondaryStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBdefs.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/SnapShotManager_test.C:13:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/snapShot.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/SnapShotManager_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/secondaryStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBdefs.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/SnapShotManager_test.C:13:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/snapShot.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/SnapShotManager_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/SnapShotManager_test.C: In function 'int main(int, char**)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/SnapShotManager_test.C:83:7: warning: unused variable 'nr_of_atoms' [-Wunused-variable]
   83 |  Size nr_of_atoms = system.countAtoms();
      |       ^~~~~~~~~~~
[ 67%] Linking CXX executable ../bin/TEST/SnapShotManager_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/SnapShotManager_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/SnapShotManager_test.dir/SnapShotManager_test_autogen/mocs_compilation.cpp.o CMakeFiles/SnapShotManager_test.dir/SnapShotManager_test.C.o -o ../bin/TEST/SnapShotManager_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 67%] Built target SnapShotManager_test
make  -f test/CMakeFiles/Pair6_12InteractionEnergyProcessor_test_autogen.dir/build.make test/CMakeFiles/Pair6_12InteractionEnergyProcessor_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/Pair6_12InteractionEnergyProcessor_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target Pair6_12InteractionEnergyProcessor_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/Pair6_12InteractionEnergyProcessor_test_autogen.dir/build.make test/CMakeFiles/Pair6_12InteractionEnergyProcessor_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 67%] Automatic MOC for target Pair6_12InteractionEnergyProcessor_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/Pair6_12InteractionEnergyProcessor_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 67%] Built target Pair6_12InteractionEnergyProcessor_test_autogen
make  -f test/CMakeFiles/Pair6_12InteractionEnergyProcessor_test.dir/build.make test/CMakeFiles/Pair6_12InteractionEnergyProcessor_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/Pair6_12InteractionEnergyProcessor_test.dir/DependInfo.cmake --color=
Scanning dependencies of target Pair6_12InteractionEnergyProcessor_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/Pair6_12InteractionEnergyProcessor_test.dir/build.make test/CMakeFiles/Pair6_12InteractionEnergyProcessor_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 67%] Building CXX object test/CMakeFiles/Pair6_12InteractionEnergyProcessor_test.dir/Pair6_12InteractionEnergyProcessor_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/Pair6_12InteractionEnergyProcessor_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Pair6_12InteractionEnergyProcessor_test.dir/Pair6_12InteractionEnergyProcessor_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/Pair6_12InteractionEnergyProcessor_test_autogen/mocs_compilation.cpp
[ 67%] Building CXX object test/CMakeFiles/Pair6_12InteractionEnergyProcessor_test.dir/Pair6_12InteractionEnergyProcessor_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/Pair6_12InteractionEnergyProcessor_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Pair6_12InteractionEnergyProcessor_test.dir/Pair6_12InteractionEnergyProcessor_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Pair6_12InteractionEnergyProcessor_test.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Pair6_12InteractionEnergyProcessor_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Pair6_12InteractionEnergyProcessor_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Pair6_12InteractionEnergyProcessor_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Pair6_12InteractionEnergyProcessor_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Pair6_12InteractionEnergyProcessor_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Pair6_12InteractionEnergyProcessor_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 67%] Linking CXX executable ../bin/TEST/Pair6_12InteractionEnergyProcessor_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/Pair6_12InteractionEnergyProcessor_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Pair6_12InteractionEnergyProcessor_test.dir/Pair6_12InteractionEnergyProcessor_test_autogen/mocs_compilation.cpp.o CMakeFiles/Pair6_12InteractionEnergyProcessor_test.dir/Pair6_12InteractionEnergyProcessor_test.C.o -o ../bin/TEST/Pair6_12InteractionEnergyProcessor_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 67%] Built target Pair6_12InteractionEnergyProcessor_test
make  -f test/CMakeFiles/Function_test_autogen.dir/build.make test/CMakeFiles/Function_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/Function_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target Function_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/Function_test_autogen.dir/build.make test/CMakeFiles/Function_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 67%] Automatic MOC for target Function_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/Function_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 67%] Built target Function_test_autogen
make  -f test/CMakeFiles/Function_test.dir/build.make test/CMakeFiles/Function_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/Function_test.dir/DependInfo.cmake --color=
Scanning dependencies of target Function_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/Function_test.dir/build.make test/CMakeFiles/Function_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 67%] Building CXX object test/CMakeFiles/Function_test.dir/Function_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/Function_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Function_test.dir/Function_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/Function_test_autogen/mocs_compilation.cpp
[ 67%] Building CXX object test/CMakeFiles/Function_test.dir/Function_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/Function_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Function_test.dir/Function_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Function_test.C
[ 67%] Linking CXX executable ../bin/TEST/Function_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/Function_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Function_test.dir/Function_test_autogen/mocs_compilation.cpp.o CMakeFiles/Function_test.dir/Function_test.C.o -o ../bin/TEST/Function_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 67%] Built target Function_test
make  -f test/CMakeFiles/Quaternion_test_autogen.dir/build.make test/CMakeFiles/Quaternion_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/Quaternion_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target Quaternion_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/Quaternion_test_autogen.dir/build.make test/CMakeFiles/Quaternion_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 67%] Automatic MOC for target Quaternion_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/Quaternion_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 67%] Built target Quaternion_test_autogen
make  -f test/CMakeFiles/Quaternion_test.dir/build.make test/CMakeFiles/Quaternion_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/Quaternion_test.dir/DependInfo.cmake --color=
Scanning dependencies of target Quaternion_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/Quaternion_test.dir/build.make test/CMakeFiles/Quaternion_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 67%] Building CXX object test/CMakeFiles/Quaternion_test.dir/Quaternion_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/Quaternion_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Quaternion_test.dir/Quaternion_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/Quaternion_test_autogen/mocs_compilation.cpp
[ 67%] Building CXX object test/CMakeFiles/Quaternion_test.dir/Quaternion_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/Quaternion_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Quaternion_test.dir/Quaternion_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Quaternion_test.C
[ 67%] Linking CXX executable ../bin/TEST/Quaternion_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/Quaternion_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Quaternion_test.dir/Quaternion_test_autogen/mocs_compilation.cpp.o CMakeFiles/Quaternion_test.dir/Quaternion_test.C.o -o ../bin/TEST/Quaternion_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 67%] Built target Quaternion_test
make  -f test/CMakeFiles/FeatureSelection_test_autogen.dir/build.make test/CMakeFiles/FeatureSelection_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/FeatureSelection_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target FeatureSelection_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/FeatureSelection_test_autogen.dir/build.make test/CMakeFiles/FeatureSelection_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 67%] Automatic MOC for target FeatureSelection_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/FeatureSelection_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 67%] Built target FeatureSelection_test_autogen
make  -f test/CMakeFiles/FeatureSelection_test.dir/build.make test/CMakeFiles/FeatureSelection_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/FeatureSelection_test.dir/DependInfo.cmake --color=
Scanning dependencies of target FeatureSelection_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/FeatureSelection_test.dir/build.make test/CMakeFiles/FeatureSelection_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 67%] Building CXX object test/CMakeFiles/FeatureSelection_test.dir/FeatureSelection_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/FeatureSelection_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/FeatureSelection_test.dir/FeatureSelection_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/FeatureSelection_test_autogen/mocs_compilation.cpp
[ 67%] Building CXX object test/CMakeFiles/FeatureSelection_test.dir/FeatureSelection_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/FeatureSelection_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/FeatureSelection_test.dir/FeatureSelection_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/FeatureSelection_test.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/FeatureSelection_test.C:4:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/FeatureSelection_test.C:4:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/FeatureSelection_test.C:4:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/FeatureSelection_test.C:4:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/FeatureSelection_test.C:4:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/FeatureSelection_test.C:4:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 67%] Linking CXX executable ../bin/TEST/FeatureSelection_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/FeatureSelection_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/FeatureSelection_test.dir/FeatureSelection_test_autogen/mocs_compilation.cpp.o CMakeFiles/FeatureSelection_test.dir/FeatureSelection_test.C.o -o ../bin/TEST/FeatureSelection_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 67%] Built target FeatureSelection_test
make  -f test/CMakeFiles/Directory_test_autogen.dir/build.make test/CMakeFiles/Directory_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/Directory_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target Directory_test_autogen
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make  -f test/CMakeFiles/Directory_test_autogen.dir/build.make test/CMakeFiles/Directory_test_autogen.dir/build
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[ 67%] Automatic MOC for target Directory_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/Directory_test_autogen.dir/AutogenInfo.json Release
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cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/Directory_test.dir/DependInfo.cmake --color=
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cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/Directory_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Directory_test.dir/Directory_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/Directory_test_autogen/mocs_compilation.cpp
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cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/Directory_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Directory_test.dir/Directory_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Directory_test.C
[ 67%] Linking CXX executable ../bin/TEST/Directory_test
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/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Directory_test.dir/Directory_test_autogen/mocs_compilation.cpp.o CMakeFiles/Directory_test.dir/Directory_test.C.o -o ../bin/TEST/Directory_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
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make  -f test/CMakeFiles/PiecewiseFunction_test.dir/build.make test/CMakeFiles/PiecewiseFunction_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/PiecewiseFunction_test.dir/DependInfo.cmake --color=
Scanning dependencies of target PiecewiseFunction_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/PiecewiseFunction_test.dir/build.make test/CMakeFiles/PiecewiseFunction_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 67%] Building CXX object test/CMakeFiles/PiecewiseFunction_test.dir/PiecewiseFunction_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/PiecewiseFunction_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/PiecewiseFunction_test.dir/PiecewiseFunction_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/PiecewiseFunction_test_autogen/mocs_compilation.cpp
[ 68%] Building CXX object test/CMakeFiles/PiecewiseFunction_test.dir/PiecewiseFunction_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/PiecewiseFunction_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/PiecewiseFunction_test.dir/PiecewiseFunction_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/PiecewiseFunction_test.C
[ 68%] Linking CXX executable ../bin/TEST/PiecewiseFunction_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/PiecewiseFunction_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/PiecewiseFunction_test.dir/PiecewiseFunction_test_autogen/mocs_compilation.cpp.o CMakeFiles/PiecewiseFunction_test.dir/PiecewiseFunction_test.C.o -o ../bin/TEST/PiecewiseFunction_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 68%] Built target PiecewiseFunction_test
make  -f test/CMakeFiles/Timer_test_autogen.dir/build.make test/CMakeFiles/Timer_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/Timer_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target Timer_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/Timer_test_autogen.dir/build.make test/CMakeFiles/Timer_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 68%] Automatic MOC for target Timer_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/Timer_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 68%] Built target Timer_test_autogen
make  -f test/CMakeFiles/Timer_test.dir/build.make test/CMakeFiles/Timer_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/Timer_test.dir/DependInfo.cmake --color=
Scanning dependencies of target Timer_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/Timer_test.dir/build.make test/CMakeFiles/Timer_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 68%] Building CXX object test/CMakeFiles/Timer_test.dir/Timer_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/Timer_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Timer_test.dir/Timer_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/Timer_test_autogen/mocs_compilation.cpp
[ 68%] Building CXX object test/CMakeFiles/Timer_test.dir/Timer_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/Timer_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Timer_test.dir/Timer_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Timer_test.C
[ 68%] Linking CXX executable ../bin/TEST/Timer_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/Timer_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Timer_test.dir/Timer_test_autogen/mocs_compilation.cpp.o CMakeFiles/Timer_test.dir/Timer_test.C.o -o ../bin/TEST/Timer_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 68%] Built target Timer_test
make  -f test/CMakeFiles/Options_test_autogen.dir/build.make test/CMakeFiles/Options_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/Options_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target Options_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/Options_test_autogen.dir/build.make test/CMakeFiles/Options_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 68%] Automatic MOC for target Options_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/Options_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 68%] Built target Options_test_autogen
make  -f test/CMakeFiles/Options_test.dir/build.make test/CMakeFiles/Options_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/Options_test.dir/DependInfo.cmake --color=
Scanning dependencies of target Options_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/Options_test.dir/build.make test/CMakeFiles/Options_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 68%] Building CXX object test/CMakeFiles/Options_test.dir/Options_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/Options_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Options_test.dir/Options_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/Options_test_autogen/mocs_compilation.cpp
[ 68%] Building CXX object test/CMakeFiles/Options_test.dir/Options_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/Options_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Options_test.dir/Options_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Options_test.C
[ 68%] Linking CXX executable ../bin/TEST/Options_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/Options_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Options_test.dir/Options_test_autogen/mocs_compilation.cpp.o CMakeFiles/Options_test.dir/Options_test.C.o -o ../bin/TEST/Options_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 68%] Built target Options_test
make  -f test/CMakeFiles/ConnectedComponentsProcessor_test_autogen.dir/build.make test/CMakeFiles/ConnectedComponentsProcessor_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/ConnectedComponentsProcessor_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target ConnectedComponentsProcessor_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/ConnectedComponentsProcessor_test_autogen.dir/build.make test/CMakeFiles/ConnectedComponentsProcessor_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 68%] Automatic MOC for target ConnectedComponentsProcessor_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/ConnectedComponentsProcessor_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 68%] Built target ConnectedComponentsProcessor_test_autogen
make  -f test/CMakeFiles/ConnectedComponentsProcessor_test.dir/build.make test/CMakeFiles/ConnectedComponentsProcessor_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/ConnectedComponentsProcessor_test.dir/DependInfo.cmake --color=
Scanning dependencies of target ConnectedComponentsProcessor_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/ConnectedComponentsProcessor_test.dir/build.make test/CMakeFiles/ConnectedComponentsProcessor_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 68%] Building CXX object test/CMakeFiles/ConnectedComponentsProcessor_test.dir/ConnectedComponentsProcessor_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/ConnectedComponentsProcessor_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/ConnectedComponentsProcessor_test.dir/ConnectedComponentsProcessor_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/ConnectedComponentsProcessor_test_autogen/mocs_compilation.cpp
[ 68%] Building CXX object test/CMakeFiles/ConnectedComponentsProcessor_test.dir/ConnectedComponentsProcessor_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/ConnectedComponentsProcessor_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/ConnectedComponentsProcessor_test.dir/ConnectedComponentsProcessor_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ConnectedComponentsProcessor_test.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/molecule.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/connectedComponentsProcessor.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ConnectedComponentsProcessor_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/molecule.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/connectedComponentsProcessor.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ConnectedComponentsProcessor_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/molecule.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/connectedComponentsProcessor.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ConnectedComponentsProcessor_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/molecule.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/connectedComponentsProcessor.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ConnectedComponentsProcessor_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/molecule.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/connectedComponentsProcessor.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ConnectedComponentsProcessor_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/molecule.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/connectedComponentsProcessor.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ConnectedComponentsProcessor_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 68%] Linking CXX executable ../bin/TEST/ConnectedComponentsProcessor_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/ConnectedComponentsProcessor_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/ConnectedComponentsProcessor_test.dir/ConnectedComponentsProcessor_test_autogen/mocs_compilation.cpp.o CMakeFiles/ConnectedComponentsProcessor_test.dir/ConnectedComponentsProcessor_test.C.o -o ../bin/TEST/ConnectedComponentsProcessor_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 68%] Built target ConnectedComponentsProcessor_test
make  -f test/CMakeFiles/HashGrid3_test_autogen.dir/build.make test/CMakeFiles/HashGrid3_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/HashGrid3_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target HashGrid3_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/HashGrid3_test_autogen.dir/build.make test/CMakeFiles/HashGrid3_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 68%] Automatic MOC for target HashGrid3_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/HashGrid3_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 68%] Built target HashGrid3_test_autogen
make  -f test/CMakeFiles/HashGrid3_test.dir/build.make test/CMakeFiles/HashGrid3_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/HashGrid3_test.dir/DependInfo.cmake --color=
Scanning dependencies of target HashGrid3_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/HashGrid3_test.dir/build.make test/CMakeFiles/HashGrid3_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 68%] Building CXX object test/CMakeFiles/HashGrid3_test.dir/HashGrid3_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/HashGrid3_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/HashGrid3_test.dir/HashGrid3_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/HashGrid3_test_autogen/mocs_compilation.cpp
[ 69%] Building CXX object test/CMakeFiles/HashGrid3_test.dir/HashGrid3_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/HashGrid3_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/HashGrid3_test.dir/HashGrid3_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/HashGrid3_test.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/HashGrid3_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h: In instantiation of 'BALL::Index BALL::HashGrid3<Item>::getIndex_(const BALL::HashGridBox3<Item>&) const [with Item = float; BALL::Index = int]':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:1667:20:   required from 'void BALL::HashGrid3<Item>::dump(std::ostream&, BALL::Size) const [with Item = float; std::ostream = std::basic_ostream<char>; BALL::Size = unsigned int]'
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:1625:7:   required from here
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:1726:46: warning: comparison of integer expressions of different signedness: 'int' and 'BALL::Size' {aka 'unsigned int'} [-Wsign-compare]
 1726 |   if ((&box < &box_[0]) || (&box - &box_[0]  >= getSize()))
      |                            ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h: In instantiation of 'BALL::Index BALL::HashGrid3<Item>::getIndex_(const BALL::HashGridBox3<Item>&) const [with Item = char; BALL::Index = int]':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:1667:20:   required from 'void BALL::HashGrid3<Item>::dump(std::ostream&, BALL::Size) const [with Item = char; std::ostream = std::basic_ostream<char>; BALL::Size = unsigned int]'
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:1625:7:   required from here
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:1726:46: warning: comparison of integer expressions of different signedness: 'int' and 'BALL::Size' {aka 'unsigned int'} [-Wsign-compare]
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h: In instantiation of 'BALL::Index BALL::HashGrid3<Item>::getIndex_(const BALL::HashGridBox3<Item>&) const [with Item = int; BALL::Index = int]':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:1667:20:   required from 'void BALL::HashGrid3<Item>::dump(std::ostream&, BALL::Size) const [with Item = int; std::ostream = std::basic_ostream<char>; BALL::Size = unsigned int]'
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:1625:7:   required from here
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:1726:46: warning: comparison of integer expressions of different signedness: 'int' and 'BALL::Size' {aka 'unsigned int'} [-Wsign-compare]
[ 69%] Linking CXX executable ../bin/TEST/HashGrid3_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/HashGrid3_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/HashGrid3_test.dir/HashGrid3_test_autogen/mocs_compilation.cpp.o CMakeFiles/HashGrid3_test.dir/HashGrid3_test.C.o -o ../bin/TEST/HashGrid3_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 69%] Built target HashGrid3_test
make  -f test/CMakeFiles/ConstBidirectionalIterator_test_autogen.dir/build.make test/CMakeFiles/ConstBidirectionalIterator_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/ConstBidirectionalIterator_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target ConstBidirectionalIterator_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/ConstBidirectionalIterator_test_autogen.dir/build.make test/CMakeFiles/ConstBidirectionalIterator_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 69%] Automatic MOC for target ConstBidirectionalIterator_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/ConstBidirectionalIterator_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 69%] Built target ConstBidirectionalIterator_test_autogen
make  -f test/CMakeFiles/ConstBidirectionalIterator_test.dir/build.make test/CMakeFiles/ConstBidirectionalIterator_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/ConstBidirectionalIterator_test.dir/DependInfo.cmake --color=
Scanning dependencies of target ConstBidirectionalIterator_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/ConstBidirectionalIterator_test.dir/build.make test/CMakeFiles/ConstBidirectionalIterator_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 69%] Building CXX object test/CMakeFiles/ConstBidirectionalIterator_test.dir/ConstBidirectionalIterator_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/ConstBidirectionalIterator_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/ConstBidirectionalIterator_test.dir/ConstBidirectionalIterator_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/ConstBidirectionalIterator_test_autogen/mocs_compilation.cpp
[ 69%] Building CXX object test/CMakeFiles/ConstBidirectionalIterator_test.dir/ConstBidirectionalIterator_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/ConstBidirectionalIterator_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/ConstBidirectionalIterator_test.dir/ConstBidirectionalIterator_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ConstBidirectionalIterator_test.C
[ 69%] Linking CXX executable ../bin/TEST/ConstBidirectionalIterator_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/ConstBidirectionalIterator_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/ConstBidirectionalIterator_test.dir/ConstBidirectionalIterator_test_autogen/mocs_compilation.cpp.o CMakeFiles/ConstBidirectionalIterator_test.dir/ConstBidirectionalIterator_test.C.o -o ../bin/TEST/ConstBidirectionalIterator_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 69%] Built target ConstBidirectionalIterator_test
make  -f test/CMakeFiles/BinaryFingerprintMethods_test_autogen.dir/build.make test/CMakeFiles/BinaryFingerprintMethods_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/BinaryFingerprintMethods_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target BinaryFingerprintMethods_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/BinaryFingerprintMethods_test_autogen.dir/build.make test/CMakeFiles/BinaryFingerprintMethods_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 69%] Automatic MOC for target BinaryFingerprintMethods_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/BinaryFingerprintMethods_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 69%] Built target BinaryFingerprintMethods_test_autogen
make  -f test/CMakeFiles/BinaryFingerprintMethods_test.dir/build.make test/CMakeFiles/BinaryFingerprintMethods_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/BinaryFingerprintMethods_test.dir/DependInfo.cmake --color=
Scanning dependencies of target BinaryFingerprintMethods_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/BinaryFingerprintMethods_test.dir/build.make test/CMakeFiles/BinaryFingerprintMethods_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 69%] Building CXX object test/CMakeFiles/BinaryFingerprintMethods_test.dir/BinaryFingerprintMethods_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/BinaryFingerprintMethods_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/BinaryFingerprintMethods_test.dir/BinaryFingerprintMethods_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/BinaryFingerprintMethods_test_autogen/mocs_compilation.cpp
[ 69%] Building CXX object test/CMakeFiles/BinaryFingerprintMethods_test.dir/BinaryFingerprintMethods_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/BinaryFingerprintMethods_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/BinaryFingerprintMethods_test.dir/BinaryFingerprintMethods_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/BinaryFingerprintMethods_test.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/molecule.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/BinaryFingerprintMethods_test.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/MOLFile.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/SDFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/BinaryFingerprintMethods_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/molecule.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/BinaryFingerprintMethods_test.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/MOLFile.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/SDFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/BinaryFingerprintMethods_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/molecule.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/BinaryFingerprintMethods_test.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/MOLFile.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/SDFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/BinaryFingerprintMethods_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/BinaryFingerprintMethods_test.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/BinaryFingerprintMethods_test.C: In function 'int main(int, char**)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/classTest.h:351:26: warning: comparison of integer expressions of different signedness: 'long int' and 'const unsigned int' [-Wsign-compare]
  351 |   TEST::this_test = ((a) == (b));\
      |                      ~~~~^~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/BinaryFingerprintMethods_test.C:186:2: note: in expansion of macro 'TEST_EQUAL'
  186 |  TEST_EQUAL(o1.getInteger(BinaryFingerprintMethods::Option::N_THREADS), BinaryFingerprintMethods::Default::N_THREADS);
      |  ^~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/classTest.h:351:26: warning: comparison of integer expressions of different signedness: 'long int' and 'const unsigned int' [-Wsign-compare]
  351 |   TEST::this_test = ((a) == (b));\
      |                      ~~~~^~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/BinaryFingerprintMethods_test.C:189:2: note: in expansion of macro 'TEST_EQUAL'
  189 |  TEST_EQUAL(o1.getInteger(BinaryFingerprintMethods::Option::MAX_CLUSTERS), BinaryFingerprintMethods::Default::MAX_CLUSTERS);
      |  ^~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/classTest.h:351:26: warning: comparison of integer expressions of different signedness: 'long int' and 'const unsigned int' [-Wsign-compare]
  351 |   TEST::this_test = ((a) == (b));\
      |                      ~~~~^~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/BinaryFingerprintMethods_test.C:216:2: note: in expansion of macro 'TEST_EQUAL'
  216 |  TEST_EQUAL(o1.getInteger(BinaryFingerprintMethods::Option::MAX_CLUSTERS), BinaryFingerprintMethods::Default::MAX_CLUSTERS);
      |  ^~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/classTest.h:351:26: warning: comparison of integer expressions of different signedness: 'long int' and 'const unsigned int' [-Wsign-compare]
  351 |   TEST::this_test = ((a) == (b));\
      |                      ~~~~^~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/BinaryFingerprintMethods_test.C:240:2: note: in expansion of macro 'TEST_EQUAL'
  240 |  TEST_EQUAL(o1.getInteger(BinaryFingerprintMethods::Option::MAX_CLUSTERS), BinaryFingerprintMethods::Default::MAX_CLUSTERS);
      |  ^~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/classTest.h:351:26: warning: comparison of integer expressions of different signedness: 'long int' and 'const unsigned int' [-Wsign-compare]
  351 |   TEST::this_test = ((a) == (b));\
      |                      ~~~~^~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/BinaryFingerprintMethods_test.C:263:2: note: in expansion of macro 'TEST_EQUAL'
  263 |  TEST_EQUAL(o1.getInteger(BinaryFingerprintMethods::Option::MAX_CLUSTERS), BinaryFingerprintMethods::Default::MAX_CLUSTERS);
      |  ^~~~~~~~~~
[ 69%] Linking CXX executable ../bin/TEST/BinaryFingerprintMethods_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/BinaryFingerprintMethods_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/BinaryFingerprintMethods_test.dir/BinaryFingerprintMethods_test_autogen/mocs_compilation.cpp.o CMakeFiles/BinaryFingerprintMethods_test.dir/BinaryFingerprintMethods_test.C.o -o ../bin/TEST/BinaryFingerprintMethods_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 69%] Built target BinaryFingerprintMethods_test
make  -f test/CMakeFiles/SecondaryStructureProcessor_test_autogen.dir/build.make test/CMakeFiles/SecondaryStructureProcessor_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/SecondaryStructureProcessor_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target SecondaryStructureProcessor_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/SecondaryStructureProcessor_test_autogen.dir/build.make test/CMakeFiles/SecondaryStructureProcessor_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 69%] Automatic MOC for target SecondaryStructureProcessor_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/SecondaryStructureProcessor_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 69%] Built target SecondaryStructureProcessor_test_autogen
make  -f test/CMakeFiles/SecondaryStructureProcessor_test.dir/build.make test/CMakeFiles/SecondaryStructureProcessor_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/SecondaryStructureProcessor_test.dir/DependInfo.cmake --color=
Scanning dependencies of target SecondaryStructureProcessor_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/SecondaryStructureProcessor_test.dir/build.make test/CMakeFiles/SecondaryStructureProcessor_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 69%] Building CXX object test/CMakeFiles/SecondaryStructureProcessor_test.dir/SecondaryStructureProcessor_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/SecondaryStructureProcessor_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/SecondaryStructureProcessor_test.dir/SecondaryStructureProcessor_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/SecondaryStructureProcessor_test_autogen/mocs_compilation.cpp
[ 69%] Building CXX object test/CMakeFiles/SecondaryStructureProcessor_test.dir/SecondaryStructureProcessor_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/SecondaryStructureProcessor_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/SecondaryStructureProcessor_test.dir/SecondaryStructureProcessor_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/SecondaryStructureProcessor_test.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/SecondaryStructureProcessor_test.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/secondaryStructureProcessor.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/SecondaryStructureProcessor_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/SecondaryStructureProcessor_test.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/secondaryStructureProcessor.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/SecondaryStructureProcessor_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/SecondaryStructureProcessor_test.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/secondaryStructureProcessor.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/SecondaryStructureProcessor_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 69%] Linking CXX executable ../bin/TEST/SecondaryStructureProcessor_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/SecondaryStructureProcessor_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/SecondaryStructureProcessor_test.dir/SecondaryStructureProcessor_test_autogen/mocs_compilation.cpp.o CMakeFiles/SecondaryStructureProcessor_test.dir/SecondaryStructureProcessor_test.C.o -o ../bin/TEST/SecondaryStructureProcessor_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 69%] Built target SecondaryStructureProcessor_test
make  -f test/CMakeFiles/Socket_test_autogen.dir/build.make test/CMakeFiles/Socket_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/Socket_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target Socket_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/Socket_test_autogen.dir/build.make test/CMakeFiles/Socket_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 69%] Automatic MOC for target Socket_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/Socket_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 69%] Built target Socket_test_autogen
make  -f test/CMakeFiles/Socket_test.dir/build.make test/CMakeFiles/Socket_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/Socket_test.dir/DependInfo.cmake --color=
Scanning dependencies of target Socket_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/Socket_test.dir/build.make test/CMakeFiles/Socket_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 69%] Building CXX object test/CMakeFiles/Socket_test.dir/Socket_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/Socket_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Socket_test.dir/Socket_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/Socket_test_autogen/mocs_compilation.cpp
[ 69%] Building CXX object test/CMakeFiles/Socket_test.dir/Socket_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/Socket_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Socket_test.dir/Socket_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Socket_test.C
[ 69%] Linking CXX executable ../bin/TEST/Socket_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/Socket_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Socket_test.dir/Socket_test_autogen/mocs_compilation.cpp.o CMakeFiles/Socket_test.dir/Socket_test.C.o -o ../bin/TEST/Socket_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 69%] Built target Socket_test
make  -f test/CMakeFiles/Matrix44_test2_autogen.dir/build.make test/CMakeFiles/Matrix44_test2_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/Matrix44_test2_autogen.dir/DependInfo.cmake --color=
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[ 69%] Automatic MOC for target Matrix44_test2
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/Matrix44_test2_autogen.dir/AutogenInfo.json Release
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make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/Matrix44_test2.dir/DependInfo.cmake --color=
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[ 69%] Building CXX object test/CMakeFiles/Matrix44_test2.dir/Matrix44_test2_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/Matrix44_test2_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Matrix44_test2.dir/Matrix44_test2_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/Matrix44_test2_autogen/mocs_compilation.cpp
[ 69%] Building CXX object test/CMakeFiles/Matrix44_test2.dir/Matrix44_test2.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/Matrix44_test2_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Matrix44_test2.dir/Matrix44_test2.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Matrix44_test2.C
[ 69%] Linking CXX executable ../bin/TEST/Matrix44_test2
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/Matrix44_test2.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Matrix44_test2.dir/Matrix44_test2_autogen/mocs_compilation.cpp.o CMakeFiles/Matrix44_test2.dir/Matrix44_test2.C.o -o ../bin/TEST/Matrix44_test2  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 69%] Built target Matrix44_test2
make  -f test/CMakeFiles/StructureMapper_test_autogen.dir/build.make test/CMakeFiles/StructureMapper_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/StructureMapper_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target StructureMapper_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/StructureMapper_test_autogen.dir/build.make test/CMakeFiles/StructureMapper_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 69%] Automatic MOC for target StructureMapper_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/StructureMapper_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 69%] Built target StructureMapper_test_autogen
make  -f test/CMakeFiles/StructureMapper_test.dir/build.make test/CMakeFiles/StructureMapper_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/StructureMapper_test.dir/DependInfo.cmake --color=
Scanning dependencies of target StructureMapper_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/StructureMapper_test.dir/build.make test/CMakeFiles/StructureMapper_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 69%] Building CXX object test/CMakeFiles/StructureMapper_test.dir/StructureMapper_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/StructureMapper_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/StructureMapper_test.dir/StructureMapper_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/StructureMapper_test_autogen/mocs_compilation.cpp
[ 69%] Building CXX object test/CMakeFiles/StructureMapper_test.dir/StructureMapper_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/StructureMapper_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/StructureMapper_test.dir/StructureMapper_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/StructureMapper_test.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chain.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chainIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/protein.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/structureMapper.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/StructureMapper_test.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/geometricTransformations.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/structureMapper.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/StructureMapper_test.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chain.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chainIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/protein.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/structureMapper.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/StructureMapper_test.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/geometricTransformations.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/structureMapper.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/StructureMapper_test.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chain.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chainIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/protein.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/structureMapper.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/StructureMapper_test.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/geometricTransformations.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/structureMapper.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/StructureMapper_test.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 69%] Linking CXX executable ../bin/TEST/StructureMapper_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/StructureMapper_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/StructureMapper_test.dir/StructureMapper_test_autogen/mocs_compilation.cpp.o CMakeFiles/StructureMapper_test.dir/StructureMapper_test.C.o -o ../bin/TEST/StructureMapper_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 69%] Built target StructureMapper_test
make  -f test/CMakeFiles/TimeStamp_test_autogen.dir/build.make test/CMakeFiles/TimeStamp_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/TimeStamp_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target TimeStamp_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/TimeStamp_test_autogen.dir/build.make test/CMakeFiles/TimeStamp_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 69%] Automatic MOC for target TimeStamp_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/TimeStamp_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 69%] Built target TimeStamp_test_autogen
make  -f test/CMakeFiles/TimeStamp_test.dir/build.make test/CMakeFiles/TimeStamp_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/TimeStamp_test.dir/DependInfo.cmake --color=
Scanning dependencies of target TimeStamp_test
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make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 69%] Building CXX object test/CMakeFiles/TimeStamp_test.dir/TimeStamp_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/TimeStamp_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/TimeStamp_test.dir/TimeStamp_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/TimeStamp_test_autogen/mocs_compilation.cpp
[ 69%] Building CXX object test/CMakeFiles/TimeStamp_test.dir/TimeStamp_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/TimeStamp_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/TimeStamp_test.dir/TimeStamp_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/TimeStamp_test.C
[ 69%] Linking CXX executable ../bin/TEST/TimeStamp_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/TimeStamp_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/TimeStamp_test.dir/TimeStamp_test_autogen/mocs_compilation.cpp.o CMakeFiles/TimeStamp_test.dir/TimeStamp_test.C.o -o ../bin/TEST/TimeStamp_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
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make  -f test/CMakeFiles/INIFile_test2_autogen.dir/build.make test/CMakeFiles/INIFile_test2_autogen.dir/depend
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cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/INIFile_test2_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target INIFile_test2_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
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[ 69%] Automatic MOC for target INIFile_test2
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/INIFile_test2_autogen.dir/AutogenInfo.json Release
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[ 69%] Built target INIFile_test2_autogen
make  -f test/CMakeFiles/INIFile_test2.dir/build.make test/CMakeFiles/INIFile_test2.dir/depend
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cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/INIFile_test2.dir/DependInfo.cmake --color=
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[ 69%] Building CXX object test/CMakeFiles/INIFile_test2.dir/INIFile_test2_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/INIFile_test2_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/INIFile_test2.dir/INIFile_test2_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/INIFile_test2_autogen/mocs_compilation.cpp
[ 69%] Building CXX object test/CMakeFiles/INIFile_test2.dir/INIFile_test2.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/INIFile_test2_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/INIFile_test2.dir/INIFile_test2.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/INIFile_test2.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ItemCollector.h:6,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/INIFile_test2.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ItemCollector.h:6,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/INIFile_test2.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ItemCollector.h:6,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/INIFile_test2.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ItemCollector.h:6,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/INIFile_test2.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ItemCollector.h:6,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/INIFile_test2.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ItemCollector.h:6,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/INIFile_test2.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 69%] Linking CXX executable ../bin/TEST/INIFile_test2
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/INIFile_test2.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/INIFile_test2.dir/INIFile_test2_autogen/mocs_compilation.cpp.o CMakeFiles/INIFile_test2.dir/INIFile_test2.C.o -o ../bin/TEST/INIFile_test2  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 69%] Built target INIFile_test2
make  -f test/CMakeFiles/NamedProperty_test_autogen.dir/build.make test/CMakeFiles/NamedProperty_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/NamedProperty_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target NamedProperty_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/NamedProperty_test_autogen.dir/build.make test/CMakeFiles/NamedProperty_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 69%] Automatic MOC for target NamedProperty_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/NamedProperty_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 69%] Built target NamedProperty_test_autogen
make  -f test/CMakeFiles/NamedProperty_test.dir/build.make test/CMakeFiles/NamedProperty_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/NamedProperty_test.dir/DependInfo.cmake --color=
Scanning dependencies of target NamedProperty_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/NamedProperty_test.dir/build.make test/CMakeFiles/NamedProperty_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 69%] Building CXX object test/CMakeFiles/NamedProperty_test.dir/NamedProperty_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/NamedProperty_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/NamedProperty_test.dir/NamedProperty_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/NamedProperty_test_autogen/mocs_compilation.cpp
[ 71%] Building CXX object test/CMakeFiles/NamedProperty_test.dir/NamedProperty_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/NamedProperty_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/NamedProperty_test.dir/NamedProperty_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/NamedProperty_test.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chain.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chainIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/protein.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/NamedProperty_test.C:12:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/NamedProperty_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chain.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chainIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/protein.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/NamedProperty_test.C:12:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/NamedProperty_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chain.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chainIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/protein.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/NamedProperty_test.C:12:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/NamedProperty_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 71%] Linking CXX executable ../bin/TEST/NamedProperty_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/NamedProperty_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/NamedProperty_test.dir/NamedProperty_test_autogen/mocs_compilation.cpp.o CMakeFiles/NamedProperty_test.dir/NamedProperty_test.C.o -o ../bin/TEST/NamedProperty_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 71%] Built target NamedProperty_test
make  -f test/CMakeFiles/Protein_test_autogen.dir/build.make test/CMakeFiles/Protein_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/Protein_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target Protein_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/Protein_test_autogen.dir/build.make test/CMakeFiles/Protein_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 72%] Automatic MOC for target Protein_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/Protein_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 72%] Built target Protein_test_autogen
make  -f test/CMakeFiles/Protein_test.dir/build.make test/CMakeFiles/Protein_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/Protein_test.dir/DependInfo.cmake --color=
Scanning dependencies of target Protein_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/Protein_test.dir/build.make test/CMakeFiles/Protein_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 72%] Building CXX object test/CMakeFiles/Protein_test.dir/Protein_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/Protein_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Protein_test.dir/Protein_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/Protein_test_autogen/mocs_compilation.cpp
[ 72%] Building CXX object test/CMakeFiles/Protein_test.dir/Protein_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/Protein_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Protein_test.dir/Protein_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Protein_test.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Protein_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Protein_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Protein_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Protein_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Protein_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Protein_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 72%] Linking CXX executable ../bin/TEST/Protein_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/Protein_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Protein_test.dir/Protein_test_autogen/mocs_compilation.cpp.o CMakeFiles/Protein_test.dir/Protein_test.C.o -o ../bin/TEST/Protein_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 72%] Built target Protein_test
make  -f test/CMakeFiles/StandardPredicates_test4_autogen.dir/build.make test/CMakeFiles/StandardPredicates_test4_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/StandardPredicates_test4_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target StandardPredicates_test4_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/StandardPredicates_test4_autogen.dir/build.make test/CMakeFiles/StandardPredicates_test4_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 72%] Automatic MOC for target StandardPredicates_test4
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/StandardPredicates_test4_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 72%] Built target StandardPredicates_test4_autogen
make  -f test/CMakeFiles/StandardPredicates_test4.dir/build.make test/CMakeFiles/StandardPredicates_test4.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/StandardPredicates_test4.dir/DependInfo.cmake --color=
Scanning dependencies of target StandardPredicates_test4
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/StandardPredicates_test4.dir/build.make test/CMakeFiles/StandardPredicates_test4.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 72%] Building CXX object test/CMakeFiles/StandardPredicates_test4.dir/StandardPredicates_test4_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/StandardPredicates_test4_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/StandardPredicates_test4.dir/StandardPredicates_test4_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/StandardPredicates_test4_autogen/mocs_compilation.cpp
[ 72%] Building CXX object test/CMakeFiles/StandardPredicates_test4.dir/StandardPredicates_test4.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/StandardPredicates_test4_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/StandardPredicates_test4.dir/StandardPredicates_test4.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/StandardPredicates_test4.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/standardPredicates.h:19,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/StandardPredicates_test4.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/standardPredicates.h:19,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/StandardPredicates_test4.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/standardPredicates.h:19,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/StandardPredicates_test4.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/standardPredicates.h:19,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/StandardPredicates_test4.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/standardPredicates.h:19,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/StandardPredicates_test4.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/standardPredicates.h:19,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/StandardPredicates_test4.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 72%] Linking CXX executable ../bin/TEST/StandardPredicates_test4
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/StandardPredicates_test4.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/StandardPredicates_test4.dir/StandardPredicates_test4_autogen/mocs_compilation.cpp.o CMakeFiles/StandardPredicates_test4.dir/StandardPredicates_test4.C.o -o ../bin/TEST/StandardPredicates_test4  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 72%] Built target StandardPredicates_test4
make  -f test/CMakeFiles/HashSet_test1_autogen.dir/build.make test/CMakeFiles/HashSet_test1_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/HashSet_test1_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target HashSet_test1_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/HashSet_test1_autogen.dir/build.make test/CMakeFiles/HashSet_test1_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 72%] Automatic MOC for target HashSet_test1
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/HashSet_test1_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 72%] Built target HashSet_test1_autogen
make  -f test/CMakeFiles/HashSet_test1.dir/build.make test/CMakeFiles/HashSet_test1.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/HashSet_test1.dir/DependInfo.cmake --color=
Scanning dependencies of target HashSet_test1
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make  -f test/CMakeFiles/HashSet_test1.dir/build.make test/CMakeFiles/HashSet_test1.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 72%] Building CXX object test/CMakeFiles/HashSet_test1.dir/HashSet_test1_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/HashSet_test1_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/HashSet_test1.dir/HashSet_test1_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/HashSet_test1_autogen/mocs_compilation.cpp
[ 72%] Building CXX object test/CMakeFiles/HashSet_test1.dir/HashSet_test1.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/HashSet_test1_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/HashSet_test1.dir/HashSet_test1.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/HashSet_test1.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ItemCollector.h:6,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/HashSet_test1.C:16:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ItemCollector.h:6,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/HashSet_test1.C:16:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ItemCollector.h:6,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/HashSet_test1.C:16:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ItemCollector.h:6,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/HashSet_test1.C:16:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ItemCollector.h:6,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/HashSet_test1.C:16:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ItemCollector.h:6,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/HashSet_test1.C:16:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 72%] Linking CXX executable ../bin/TEST/HashSet_test1
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/HashSet_test1.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/HashSet_test1.dir/HashSet_test1_autogen/mocs_compilation.cpp.o CMakeFiles/HashSet_test1.dir/HashSet_test1.C.o -o ../bin/TEST/HashSet_test1  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 72%] Built target HashSet_test1
make  -f test/CMakeFiles/Factory_test_autogen.dir/build.make test/CMakeFiles/Factory_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/Factory_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target Factory_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/Factory_test_autogen.dir/build.make test/CMakeFiles/Factory_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 72%] Automatic MOC for target Factory_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/Factory_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 72%] Built target Factory_test_autogen
make  -f test/CMakeFiles/Factory_test.dir/build.make test/CMakeFiles/Factory_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/Factory_test.dir/DependInfo.cmake --color=
Scanning dependencies of target Factory_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/Factory_test.dir/build.make test/CMakeFiles/Factory_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 72%] Building CXX object test/CMakeFiles/Factory_test.dir/Factory_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/Factory_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Factory_test.dir/Factory_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/Factory_test_autogen/mocs_compilation.cpp
[ 72%] Building CXX object test/CMakeFiles/Factory_test.dir/Factory_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/Factory_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Factory_test.dir/Factory_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Factory_test.C
[ 72%] Linking CXX executable ../bin/TEST/Factory_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/Factory_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Factory_test.dir/Factory_test_autogen/mocs_compilation.cpp.o CMakeFiles/Factory_test.dir/Factory_test.C.o -o ../bin/TEST/Factory_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 72%] Built target Factory_test
make  -f test/CMakeFiles/SnapShot_test_autogen.dir/build.make test/CMakeFiles/SnapShot_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/SnapShot_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target SnapShot_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/SnapShot_test_autogen.dir/build.make test/CMakeFiles/SnapShot_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 72%] Automatic MOC for target SnapShot_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/SnapShot_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 72%] Built target SnapShot_test_autogen
make  -f test/CMakeFiles/SnapShot_test.dir/build.make test/CMakeFiles/SnapShot_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/SnapShot_test.dir/DependInfo.cmake --color=
Scanning dependencies of target SnapShot_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/SnapShot_test.dir/build.make test/CMakeFiles/SnapShot_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 72%] Building CXX object test/CMakeFiles/SnapShot_test.dir/SnapShot_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/SnapShot_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/SnapShot_test.dir/SnapShot_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/SnapShot_test_autogen/mocs_compilation.cpp
[ 72%] Building CXX object test/CMakeFiles/SnapShot_test.dir/SnapShot_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/SnapShot_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/SnapShot_test.dir/SnapShot_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/SnapShot_test.C
[ 72%] Linking CXX executable ../bin/TEST/SnapShot_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/SnapShot_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/SnapShot_test.dir/SnapShot_test_autogen/mocs_compilation.cpp.o CMakeFiles/SnapShot_test.dir/SnapShot_test.C.o -o ../bin/TEST/SnapShot_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 72%] Built target SnapShot_test
make  -f test/CMakeFiles/VersionInfo_test_autogen.dir/build.make test/CMakeFiles/VersionInfo_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/VersionInfo_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target VersionInfo_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/VersionInfo_test_autogen.dir/build.make test/CMakeFiles/VersionInfo_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 72%] Automatic MOC for target VersionInfo_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/VersionInfo_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 72%] Built target VersionInfo_test_autogen
make  -f test/CMakeFiles/VersionInfo_test.dir/build.make test/CMakeFiles/VersionInfo_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/VersionInfo_test.dir/DependInfo.cmake --color=
Scanning dependencies of target VersionInfo_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/VersionInfo_test.dir/build.make test/CMakeFiles/VersionInfo_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 72%] Building CXX object test/CMakeFiles/VersionInfo_test.dir/VersionInfo_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/VersionInfo_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/VersionInfo_test.dir/VersionInfo_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/VersionInfo_test_autogen/mocs_compilation.cpp
[ 72%] Building CXX object test/CMakeFiles/VersionInfo_test.dir/VersionInfo_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/VersionInfo_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/VersionInfo_test.dir/VersionInfo_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/VersionInfo_test.C
[ 72%] Linking CXX executable ../bin/TEST/VersionInfo_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/VersionInfo_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/VersionInfo_test.dir/VersionInfo_test_autogen/mocs_compilation.cpp.o CMakeFiles/VersionInfo_test.dir/VersionInfo_test.C.o -o ../bin/TEST/VersionInfo_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 72%] Built target VersionInfo_test
make  -f test/CMakeFiles/NMRStarFile_test_autogen.dir/build.make test/CMakeFiles/NMRStarFile_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/NMRStarFile_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target NMRStarFile_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/NMRStarFile_test_autogen.dir/build.make test/CMakeFiles/NMRStarFile_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 72%] Automatic MOC for target NMRStarFile_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/NMRStarFile_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 72%] Built target NMRStarFile_test_autogen
make  -f test/CMakeFiles/NMRStarFile_test.dir/build.make test/CMakeFiles/NMRStarFile_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/NMRStarFile_test.dir/DependInfo.cmake --color=
Scanning dependencies of target NMRStarFile_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/NMRStarFile_test.dir/build.make test/CMakeFiles/NMRStarFile_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 72%] Building CXX object test/CMakeFiles/NMRStarFile_test.dir/NMRStarFile_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/NMRStarFile_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/NMRStarFile_test.dir/NMRStarFile_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/NMRStarFile_test_autogen/mocs_compilation.cpp
[ 72%] Building CXX object test/CMakeFiles/NMRStarFile_test.dir/NMRStarFile_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/NMRStarFile_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/NMRStarFile_test.dir/NMRStarFile_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/NMRStarFile_test.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/NMRStarFile_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/NMRStarFile_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/NMRStarFile_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/NMRStarFile_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/NMRStarFile_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/NMRStarFile_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/NMRStarFile_test.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/NMRStarFile_test.C: In function 'int main(int, char**)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/classTest.h:326:2: warning: macro expands to multiple statements [-Wmultistatement-macros]
  326 |  TEST::this_test = fabs((a) - (b)) < TEST::precision; \
      |  ^~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/NMRStarFile_test.C:464:5: note: in expansion of macro 'TEST_REAL_EQUAL'
  464 |     TEST_REAL_EQUAL(atom->getProperty(ShiftModule::PROPERTY__EXPERIMENTAL__SHIFT).getFloat(), 4.804f)
      |     ^~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/NMRStarFile_test.C:463:4: note: some parts of macro expansion are not guarded by this 'if' clause
  463 |    if (atom->hasProperty(ShiftModule::PROPERTY__EXPERIMENTAL__SHIFT))
      |    ^~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/NMRStarFile_test.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/classTest.h:326:2: warning: macro expands to multiple statements [-Wmultistatement-macros]
  326 |  TEST::this_test = fabs((a) - (b)) < TEST::precision; \
      |  ^~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/NMRStarFile_test.C:478:5: note: in expansion of macro 'TEST_REAL_EQUAL'
  478 |     TEST_REAL_EQUAL(atom2->getProperty(ShiftModule::PROPERTY__EXPERIMENTAL__SHIFT).getFloat(), 118.691f)
      |     ^~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/NMRStarFile_test.C:477:4: note: some parts of macro expansion are not guarded by this 'if' clause
  477 |    if (atom2->hasProperty(ShiftModule::PROPERTY__EXPERIMENTAL__SHIFT))
      |    ^~
[ 72%] Linking CXX executable ../bin/TEST/NMRStarFile_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/NMRStarFile_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/NMRStarFile_test.dir/NMRStarFile_test_autogen/mocs_compilation.cpp.o CMakeFiles/NMRStarFile_test.dir/NMRStarFile_test.C.o -o ../bin/TEST/NMRStarFile_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 72%] Built target NMRStarFile_test
make  -f test/CMakeFiles/HBondProcessor_test_autogen.dir/build.make test/CMakeFiles/HBondProcessor_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/HBondProcessor_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target HBondProcessor_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/HBondProcessor_test_autogen.dir/build.make test/CMakeFiles/HBondProcessor_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 72%] Automatic MOC for target HBondProcessor_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/HBondProcessor_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 72%] Built target HBondProcessor_test_autogen
make  -f test/CMakeFiles/HBondProcessor_test.dir/build.make test/CMakeFiles/HBondProcessor_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/HBondProcessor_test.dir/DependInfo.cmake --color=
Scanning dependencies of target HBondProcessor_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/HBondProcessor_test.dir/build.make test/CMakeFiles/HBondProcessor_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 72%] Building CXX object test/CMakeFiles/HBondProcessor_test.dir/HBondProcessor_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/HBondProcessor_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/HBondProcessor_test.dir/HBondProcessor_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/HBondProcessor_test_autogen/mocs_compilation.cpp
[ 72%] Building CXX object test/CMakeFiles/HBondProcessor_test.dir/HBondProcessor_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/HBondProcessor_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/HBondProcessor_test.dir/HBondProcessor_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/HBondProcessor_test.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/HBondProcessor.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/HBondProcessor_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/HBondProcessor.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/HBondProcessor_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/HBondProcessor.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/HBondProcessor_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/HBondProcessor.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/HBondProcessor_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/HBondProcessor.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/HBondProcessor_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/HBondProcessor.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/HBondProcessor_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/HBondProcessor_test.C:13:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/HBondProcessor_test.C: In function 'int main(int, char**)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:108:49: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  108 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/HBondProcessor_test.C:106:2: note: in expansion of macro 'BALL_FOREACH_BOND'
  106 |  BALL_FOREACH_BOND(sys, at_it, bond_it)
      |  ^~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/HBondProcessor.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/HBondProcessor_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/HBondProcessor_test.C:13:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/HBondProcessor_test.C: In function 'int main(int, char**)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:108:49: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' first required here
  108 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/HBondProcessor_test.C:106:2: note: in expansion of macro 'BALL_FOREACH_BOND'
  106 |  BALL_FOREACH_BOND(sys, at_it, bond_it)
      |  ^~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:110:51: warning: implicitly-declared 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  110 |   for (bond_iterator = (*atom_iterator).beginBond(); \
      |                                                   ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/HBondProcessor_test.C:106:2: note: in expansion of macro 'BALL_FOREACH_BOND'
  106 |  BALL_FOREACH_BOND(sys, at_it, bond_it)
      |  ^~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/HBondProcessor.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/HBondProcessor_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:437:15: note: because 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::RandomAccessIterator<Container, DataType, Position, Traits>::RandomAccessIterator(const BALL::RandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
  437 |   BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:413:8: warning: implicitly-declared 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  413 |  class RandomAccessIterator
      |        ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:47:15: note: because 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   47 |   BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:24:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   24 |  class ConstRandomAccessIterator
      |        ^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/HBondProcessor.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/HBondProcessor_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/HBondProcessor.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/HBondProcessor_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:413:8: note: synthesized method 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' first required here
  413 |  class RandomAccessIterator
      |        ^~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/HBondProcessor_test.C:13:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/HBondProcessor_test.C: In function 'int main(int, char**)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:110:51: note: synthesized method 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' first required here
  110 |   for (bond_iterator = (*atom_iterator).beginBond(); \
      |                                                   ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/HBondProcessor_test.C:106:2: note: in expansion of macro 'BALL_FOREACH_BOND'
  106 |  BALL_FOREACH_BOND(sys, at_it, bond_it)
      |  ^~~~~~~~~~~~~~~~~
[ 72%] Linking CXX executable ../bin/TEST/HBondProcessor_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/HBondProcessor_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/HBondProcessor_test.dir/HBondProcessor_test_autogen/mocs_compilation.cpp.o CMakeFiles/HBondProcessor_test.dir/HBondProcessor_test.C.o -o ../bin/TEST/HBondProcessor_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 72%] Built target HBondProcessor_test
make  -f test/CMakeFiles/SurfaceDescriptors_test_autogen.dir/build.make test/CMakeFiles/SurfaceDescriptors_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/SurfaceDescriptors_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target SurfaceDescriptors_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/SurfaceDescriptors_test_autogen.dir/build.make test/CMakeFiles/SurfaceDescriptors_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 73%] Automatic MOC for target SurfaceDescriptors_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/SurfaceDescriptors_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 73%] Built target SurfaceDescriptors_test_autogen
make  -f test/CMakeFiles/SurfaceDescriptors_test.dir/build.make test/CMakeFiles/SurfaceDescriptors_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/SurfaceDescriptors_test.dir/DependInfo.cmake --color=
Scanning dependencies of target SurfaceDescriptors_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/SurfaceDescriptors_test.dir/build.make test/CMakeFiles/SurfaceDescriptors_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 73%] Building CXX object test/CMakeFiles/SurfaceDescriptors_test.dir/SurfaceDescriptors_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/SurfaceDescriptors_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/SurfaceDescriptors_test.dir/SurfaceDescriptors_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/SurfaceDescriptors_test_autogen/mocs_compilation.cpp
[ 73%] Building CXX object test/CMakeFiles/SurfaceDescriptors_test.dir/SurfaceDescriptors_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/SurfaceDescriptors_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/SurfaceDescriptors_test.dir/SurfaceDescriptors_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/SurfaceDescriptors_test.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/descriptor.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/surfaceBase.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/surfaceDescriptors.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/SurfaceDescriptors_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/descriptor.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/surfaceBase.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/surfaceDescriptors.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/SurfaceDescriptors_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/descriptor.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/surfaceBase.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/surfaceDescriptors.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/SurfaceDescriptors_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/descriptor.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/surfaceBase.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/surfaceDescriptors.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/SurfaceDescriptors_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/descriptor.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/surfaceBase.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/surfaceDescriptors.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/SurfaceDescriptors_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/descriptor.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/surfaceBase.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/surfaceDescriptors.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/SurfaceDescriptors_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 73%] Linking CXX executable ../bin/TEST/SurfaceDescriptors_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/SurfaceDescriptors_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/SurfaceDescriptors_test.dir/SurfaceDescriptors_test_autogen/mocs_compilation.cpp.o CMakeFiles/SurfaceDescriptors_test.dir/SurfaceDescriptors_test.C.o -o ../bin/TEST/SurfaceDescriptors_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 73%] Built target SurfaceDescriptors_test
make  -f test/CMakeFiles/AssignBondOrderProcessor_test2_autogen.dir/build.make test/CMakeFiles/AssignBondOrderProcessor_test2_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/AssignBondOrderProcessor_test2_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target AssignBondOrderProcessor_test2_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/AssignBondOrderProcessor_test2_autogen.dir/build.make test/CMakeFiles/AssignBondOrderProcessor_test2_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 73%] Automatic MOC for target AssignBondOrderProcessor_test2
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/AssignBondOrderProcessor_test2_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 73%] Built target AssignBondOrderProcessor_test2_autogen
make  -f test/CMakeFiles/AssignBondOrderProcessor_test2.dir/build.make test/CMakeFiles/AssignBondOrderProcessor_test2.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/AssignBondOrderProcessor_test2.dir/DependInfo.cmake --color=
Scanning dependencies of target AssignBondOrderProcessor_test2
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/AssignBondOrderProcessor_test2.dir/build.make test/CMakeFiles/AssignBondOrderProcessor_test2.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 73%] Building CXX object test/CMakeFiles/AssignBondOrderProcessor_test2.dir/AssignBondOrderProcessor_test2_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/AssignBondOrderProcessor_test2_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/AssignBondOrderProcessor_test2.dir/AssignBondOrderProcessor_test2_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/AssignBondOrderProcessor_test2_autogen/mocs_compilation.cpp
[ 73%] Building CXX object test/CMakeFiles/AssignBondOrderProcessor_test2.dir/AssignBondOrderProcessor_test2.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/AssignBondOrderProcessor_test2_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/AssignBondOrderProcessor_test2.dir/AssignBondOrderProcessor_test2.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AssignBondOrderProcessor_test2.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/assignBondOrderProcessor.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AssignBondOrderProcessor_test2.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/assignBondOrderProcessor.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AssignBondOrderProcessor_test2.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/assignBondOrderProcessor.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AssignBondOrderProcessor_test2.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/assignBondOrderProcessor.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AssignBondOrderProcessor_test2.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/assignBondOrderProcessor.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AssignBondOrderProcessor_test2.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/assignBondOrderProcessor.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AssignBondOrderProcessor_test2.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AssignBondOrderProcessor_test2.C:17:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AssignBondOrderProcessor_test2.C: In function 'void storeBondOrders(BALL::System&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:108:49: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  108 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AssignBondOrderProcessor_test2.C:29:2: note: in expansion of macro 'BALL_FOREACH_BOND'
   29 |  BALL_FOREACH_BOND(sys, a_it, b_it)
      |  ^~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/assignBondOrderProcessor.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AssignBondOrderProcessor_test2.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AssignBondOrderProcessor_test2.C:17:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AssignBondOrderProcessor_test2.C: In function 'void storeBondOrders(BALL::System&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:108:49: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' first required here
  108 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AssignBondOrderProcessor_test2.C:29:2: note: in expansion of macro 'BALL_FOREACH_BOND'
   29 |  BALL_FOREACH_BOND(sys, a_it, b_it)
      |  ^~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:110:51: warning: implicitly-declared 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  110 |   for (bond_iterator = (*atom_iterator).beginBond(); \
      |                                                   ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AssignBondOrderProcessor_test2.C:29:2: note: in expansion of macro 'BALL_FOREACH_BOND'
   29 |  BALL_FOREACH_BOND(sys, a_it, b_it)
      |  ^~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/assignBondOrderProcessor.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AssignBondOrderProcessor_test2.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:437:15: note: because 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::RandomAccessIterator<Container, DataType, Position, Traits>::RandomAccessIterator(const BALL::RandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
  437 |   BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:413:8: warning: implicitly-declared 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  413 |  class RandomAccessIterator
      |        ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:47:15: note: because 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   47 |   BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:24:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   24 |  class ConstRandomAccessIterator
      |        ^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/assignBondOrderProcessor.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AssignBondOrderProcessor_test2.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/assignBondOrderProcessor.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AssignBondOrderProcessor_test2.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:413:8: note: synthesized method 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' first required here
  413 |  class RandomAccessIterator
      |        ^~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AssignBondOrderProcessor_test2.C:17:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AssignBondOrderProcessor_test2.C: In function 'void storeBondOrders(BALL::System&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:110:51: note: synthesized method 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' first required here
  110 |   for (bond_iterator = (*atom_iterator).beginBond(); \
      |                                                   ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AssignBondOrderProcessor_test2.C:29:2: note: in expansion of macro 'BALL_FOREACH_BOND'
   29 |  BALL_FOREACH_BOND(sys, a_it, b_it)
      |  ^~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AssignBondOrderProcessor_test2.C: In function 'void deleteBondOrders(BALL::System&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:108:49: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  108 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AssignBondOrderProcessor_test2.C:39:2: note: in expansion of macro 'BALL_FOREACH_BOND'
   39 |  BALL_FOREACH_BOND(sys, a_it, b_it)
      |  ^~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/assignBondOrderProcessor.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AssignBondOrderProcessor_test2.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AssignBondOrderProcessor_test2.C:17:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:110:51: warning: implicitly-declared 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  110 |   for (bond_iterator = (*atom_iterator).beginBond(); \
      |                                                   ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AssignBondOrderProcessor_test2.C:39:2: note: in expansion of macro 'BALL_FOREACH_BOND'
   39 |  BALL_FOREACH_BOND(sys, a_it, b_it)
      |  ^~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/assignBondOrderProcessor.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AssignBondOrderProcessor_test2.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:437:15: note: because 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::RandomAccessIterator<Container, DataType, Position, Traits>::RandomAccessIterator(const BALL::RandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
  437 |   BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AssignBondOrderProcessor_test2.C:17:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AssignBondOrderProcessor_test2.C: In function 'void storeHBonds(BALL::System&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:64:49: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   64 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AssignBondOrderProcessor_test2.C:50:2: note: in expansion of macro 'BALL_FOREACH_ATOM'
   50 |  BALL_FOREACH_ATOM(sys, a_it)
      |  ^~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/assignBondOrderProcessor.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AssignBondOrderProcessor_test2.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AssignBondOrderProcessor_test2.C:53:29: warning: implicitly-declared 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   53 |   for (b_it=a_it->beginBond(); b_it != a_it->endBond(); b_it++)
      |                             ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/assignBondOrderProcessor.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AssignBondOrderProcessor_test2.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:437:15: note: because 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::RandomAccessIterator<Container, DataType, Position, Traits>::RandomAccessIterator(const BALL::RandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
  437 |   BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AssignBondOrderProcessor_test2.C:17:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AssignBondOrderProcessor_test2.C: In function 'void deleteHBonds(BALL::System&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:64:49: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   64 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AssignBondOrderProcessor_test2.C:67:2: note: in expansion of macro 'BALL_FOREACH_ATOM'
   67 |  BALL_FOREACH_ATOM(sys, a_it)
      |  ^~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/assignBondOrderProcessor.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AssignBondOrderProcessor_test2.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AssignBondOrderProcessor_test2.C:17:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AssignBondOrderProcessor_test2.C: In function 'bool compareBondOrder(BALL::System&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:108:49: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  108 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AssignBondOrderProcessor_test2.C:83:2: note: in expansion of macro 'BALL_FOREACH_BOND'
   83 |  BALL_FOREACH_BOND(sys, a_it, b_it)
      |  ^~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/assignBondOrderProcessor.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AssignBondOrderProcessor_test2.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AssignBondOrderProcessor_test2.C:17:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:110:51: warning: implicitly-declared 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  110 |   for (bond_iterator = (*atom_iterator).beginBond(); \
      |                                                   ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AssignBondOrderProcessor_test2.C:83:2: note: in expansion of macro 'BALL_FOREACH_BOND'
   83 |  BALL_FOREACH_BOND(sys, a_it, b_it)
      |  ^~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/assignBondOrderProcessor.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AssignBondOrderProcessor_test2.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:437:15: note: because 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::RandomAccessIterator<Container, DataType, Position, Traits>::RandomAccessIterator(const BALL::RandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
  437 |   BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AssignBondOrderProcessor_test2.C:17:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AssignBondOrderProcessor_test2.C: In function 'bool compareHBonds(BALL::System&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:64:49: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   64 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AssignBondOrderProcessor_test2.C:100:2: note: in expansion of macro 'BALL_FOREACH_ATOM'
  100 |  BALL_FOREACH_ATOM(sys, a_it)
      |  ^~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/assignBondOrderProcessor.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AssignBondOrderProcessor_test2.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AssignBondOrderProcessor_test2.C:103:29: warning: implicitly-declared 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  103 |   for (b_it=a_it->beginBond(); b_it != a_it->endBond(); b_it++)
      |                             ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/assignBondOrderProcessor.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AssignBondOrderProcessor_test2.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:437:15: note: because 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::RandomAccessIterator<Container, DataType, Position, Traits>::RandomAccessIterator(const BALL::RandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
  437 |   BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AssignBondOrderProcessor_test2.C: In function 'int main(int, char**)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AssignBondOrderProcessor_test2.C:955:30: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  955 |  for (a_it = sys40.beginAtom(); a_it != sys40.endAtom(); a_it++)
      |                              ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/assignBondOrderProcessor.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AssignBondOrderProcessor_test2.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AssignBondOrderProcessor_test2.C:957:31: warning: implicitly-declared 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  957 |   for (b_it = a_it->beginBond(); (b_it != a_it->endBond()) && (counter < 7); b_it++)
      |                               ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/assignBondOrderProcessor.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AssignBondOrderProcessor_test2.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:437:15: note: because 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::RandomAccessIterator<Container, DataType, Position, Traits>::RandomAccessIterator(const BALL::RandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
  437 |   BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~
[ 73%] Linking CXX executable ../bin/TEST/AssignBondOrderProcessor_test2
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/AssignBondOrderProcessor_test2.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/AssignBondOrderProcessor_test2.dir/AssignBondOrderProcessor_test2_autogen/mocs_compilation.cpp.o CMakeFiles/AssignBondOrderProcessor_test2.dir/AssignBondOrderProcessor_test2.C.o -o ../bin/TEST/AssignBondOrderProcessor_test2  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 73%] Built target AssignBondOrderProcessor_test2
make  -f test/CMakeFiles/BindingPocketProcessor_test_autogen.dir/build.make test/CMakeFiles/BindingPocketProcessor_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/BindingPocketProcessor_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target BindingPocketProcessor_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/BindingPocketProcessor_test_autogen.dir/build.make test/CMakeFiles/BindingPocketProcessor_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 73%] Automatic MOC for target BindingPocketProcessor_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/BindingPocketProcessor_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 73%] Built target BindingPocketProcessor_test_autogen
make  -f test/CMakeFiles/BindingPocketProcessor_test.dir/build.make test/CMakeFiles/BindingPocketProcessor_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/BindingPocketProcessor_test.dir/DependInfo.cmake --color=
Scanning dependencies of target BindingPocketProcessor_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/BindingPocketProcessor_test.dir/build.make test/CMakeFiles/BindingPocketProcessor_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 73%] Building CXX object test/CMakeFiles/BindingPocketProcessor_test.dir/BindingPocketProcessor_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/BindingPocketProcessor_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/BindingPocketProcessor_test.dir/BindingPocketProcessor_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/BindingPocketProcessor_test_autogen/mocs_compilation.cpp
[ 73%] Building CXX object test/CMakeFiles/BindingPocketProcessor_test.dir/BindingPocketProcessor_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/BindingPocketProcessor_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/BindingPocketProcessor_test.dir/BindingPocketProcessor_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/BindingPocketProcessor_test.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/secondaryStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBdefs.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/BindingPocketProcessor_test.C:3:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/BindingPocketProcessor_test.C:3:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/secondaryStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBdefs.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/BindingPocketProcessor_test.C:3:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/BindingPocketProcessor_test.C:3:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/secondaryStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBdefs.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/BindingPocketProcessor_test.C:3:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/BindingPocketProcessor_test.C:3:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 73%] Linking CXX executable ../bin/TEST/BindingPocketProcessor_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/BindingPocketProcessor_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/BindingPocketProcessor_test.dir/BindingPocketProcessor_test_autogen/mocs_compilation.cpp.o CMakeFiles/BindingPocketProcessor_test.dir/BindingPocketProcessor_test.C.o -o ../bin/TEST/BindingPocketProcessor_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 73%] Built target BindingPocketProcessor_test
make  -f test/CMakeFiles/BitVector_test2_autogen.dir/build.make test/CMakeFiles/BitVector_test2_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/BitVector_test2_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target BitVector_test2_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/BitVector_test2_autogen.dir/build.make test/CMakeFiles/BitVector_test2_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 73%] Automatic MOC for target BitVector_test2
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/BitVector_test2_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 73%] Built target BitVector_test2_autogen
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cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/BitVector_test2.dir/DependInfo.cmake --color=
Scanning dependencies of target BitVector_test2
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make  -f test/CMakeFiles/BitVector_test2.dir/build.make test/CMakeFiles/BitVector_test2.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 73%] Building CXX object test/CMakeFiles/BitVector_test2.dir/BitVector_test2_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/BitVector_test2_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/BitVector_test2.dir/BitVector_test2_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/BitVector_test2_autogen/mocs_compilation.cpp
[ 73%] Building CXX object test/CMakeFiles/BitVector_test2.dir/BitVector_test2.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/BitVector_test2_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/BitVector_test2.dir/BitVector_test2.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/BitVector_test2.C
[ 73%] Linking CXX executable ../bin/TEST/BitVector_test2
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/BitVector_test2.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/BitVector_test2.dir/BitVector_test2_autogen/mocs_compilation.cpp.o CMakeFiles/BitVector_test2.dir/BitVector_test2.C.o -o ../bin/TEST/BitVector_test2  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 73%] Built target BitVector_test2
make  -f test/CMakeFiles/DockResult_test_autogen.dir/build.make test/CMakeFiles/DockResult_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/DockResult_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target DockResult_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/DockResult_test_autogen.dir/build.make test/CMakeFiles/DockResult_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 73%] Automatic MOC for target DockResult_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/DockResult_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 73%] Built target DockResult_test_autogen
make  -f test/CMakeFiles/DockResult_test.dir/build.make test/CMakeFiles/DockResult_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/DockResult_test.dir/DependInfo.cmake --color=
Scanning dependencies of target DockResult_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/DockResult_test.dir/build.make test/CMakeFiles/DockResult_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 73%] Building CXX object test/CMakeFiles/DockResult_test.dir/DockResult_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/DockResult_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/DockResult_test.dir/DockResult_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/DockResult_test_autogen/mocs_compilation.cpp
[ 73%] Building CXX object test/CMakeFiles/DockResult_test.dir/DockResult_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/DockResult_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/DockResult_test.dir/DockResult_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/DockResult_test.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/conformationSet.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/dockResult.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/DockResult_test.C:3:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/dockResult.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/DockResult_test.C:3:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/conformationSet.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/dockResult.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/DockResult_test.C:3:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/dockResult.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/DockResult_test.C:3:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/conformationSet.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/dockResult.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/DockResult_test.C:3:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/dockResult.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/DockResult_test.C:3:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 75%] Linking CXX executable ../bin/TEST/DockResult_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/DockResult_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/DockResult_test.dir/DockResult_test_autogen/mocs_compilation.cpp.o CMakeFiles/DockResult_test.dir/DockResult_test.C.o -o ../bin/TEST/DockResult_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 75%] Built target DockResult_test
make  -f test/CMakeFiles/JohnsonBoveyShiftProcessor_test_autogen.dir/build.make test/CMakeFiles/JohnsonBoveyShiftProcessor_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/JohnsonBoveyShiftProcessor_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target JohnsonBoveyShiftProcessor_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/JohnsonBoveyShiftProcessor_test_autogen.dir/build.make test/CMakeFiles/JohnsonBoveyShiftProcessor_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 75%] Automatic MOC for target JohnsonBoveyShiftProcessor_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/JohnsonBoveyShiftProcessor_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 75%] Built target JohnsonBoveyShiftProcessor_test_autogen
make  -f test/CMakeFiles/JohnsonBoveyShiftProcessor_test.dir/build.make test/CMakeFiles/JohnsonBoveyShiftProcessor_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/JohnsonBoveyShiftProcessor_test.dir/DependInfo.cmake --color=
Scanning dependencies of target JohnsonBoveyShiftProcessor_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/JohnsonBoveyShiftProcessor_test.dir/build.make test/CMakeFiles/JohnsonBoveyShiftProcessor_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 75%] Building CXX object test/CMakeFiles/JohnsonBoveyShiftProcessor_test.dir/JohnsonBoveyShiftProcessor_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/JohnsonBoveyShiftProcessor_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/JohnsonBoveyShiftProcessor_test.dir/JohnsonBoveyShiftProcessor_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/JohnsonBoveyShiftProcessor_test_autogen/mocs_compilation.cpp
[ 75%] Building CXX object test/CMakeFiles/JohnsonBoveyShiftProcessor_test.dir/JohnsonBoveyShiftProcessor_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/JohnsonBoveyShiftProcessor_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/JohnsonBoveyShiftProcessor_test.dir/JohnsonBoveyShiftProcessor_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/JohnsonBoveyShiftProcessor_test.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/moleculeIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/shiftModule.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/johnsonBoveyShiftProcessor.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/JohnsonBoveyShiftProcessor_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/expressionPredicate.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/expressionTree.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/expressionParser.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/expression.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/johnsonBoveyShiftProcessor.h:12,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/JohnsonBoveyShiftProcessor_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/moleculeIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/shiftModule.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/johnsonBoveyShiftProcessor.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/JohnsonBoveyShiftProcessor_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/expressionPredicate.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/expressionTree.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/expressionParser.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/expression.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/johnsonBoveyShiftProcessor.h:12,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/JohnsonBoveyShiftProcessor_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/moleculeIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/shiftModule.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/johnsonBoveyShiftProcessor.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/JohnsonBoveyShiftProcessor_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/expressionPredicate.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/expressionTree.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/expressionParser.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/expression.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/johnsonBoveyShiftProcessor.h:12,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/JohnsonBoveyShiftProcessor_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 75%] Linking CXX executable ../bin/TEST/JohnsonBoveyShiftProcessor_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/JohnsonBoveyShiftProcessor_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/JohnsonBoveyShiftProcessor_test.dir/JohnsonBoveyShiftProcessor_test_autogen/mocs_compilation.cpp.o CMakeFiles/JohnsonBoveyShiftProcessor_test.dir/JohnsonBoveyShiftProcessor_test.C.o -o ../bin/TEST/JohnsonBoveyShiftProcessor_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 75%] Built target JohnsonBoveyShiftProcessor_test
make  -f test/CMakeFiles/Substring_test_autogen.dir/build.make test/CMakeFiles/Substring_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/Substring_test_autogen.dir/DependInfo.cmake --color=
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[ 75%] Automatic MOC for target Substring_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/Substring_test_autogen.dir/AutogenInfo.json Release
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make  -f test/CMakeFiles/Substring_test.dir/build.make test/CMakeFiles/Substring_test.dir/depend
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cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/Substring_test.dir/DependInfo.cmake --color=
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cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/Substring_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Substring_test.dir/Substring_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/Substring_test_autogen/mocs_compilation.cpp
[ 75%] Building CXX object test/CMakeFiles/Substring_test.dir/Substring_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/Substring_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Substring_test.dir/Substring_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Substring_test.C
[ 75%] Linking CXX executable ../bin/TEST/Substring_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/Substring_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Substring_test.dir/Substring_test_autogen/mocs_compilation.cpp.o CMakeFiles/Substring_test.dir/Substring_test.C.o -o ../bin/TEST/Substring_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
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cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/SDFile_test_autogen.dir/DependInfo.cmake --color=
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cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/SDFile_test_autogen.dir/AutogenInfo.json Release
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cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/SDFile_test.dir/DependInfo.cmake --color=
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cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/SDFile_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/SDFile_test.dir/SDFile_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/SDFile_test_autogen/mocs_compilation.cpp
[ 75%] Building CXX object test/CMakeFiles/SDFile_test.dir/SDFile_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/SDFile_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/SDFile_test.dir/SDFile_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/SDFile_test.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/SDFile_test.C:14:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/MOLFile.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/SDFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/SDFile_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/SDFile_test.C:14:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/MOLFile.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/SDFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/SDFile_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/SDFile_test.C:14:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/MOLFile.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/SDFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/SDFile_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 75%] Linking CXX executable ../bin/TEST/SDFile_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/SDFile_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/SDFile_test.dir/SDFile_test_autogen/mocs_compilation.cpp.o CMakeFiles/SDFile_test.dir/SDFile_test.C.o -o ../bin/TEST/SDFile_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 75%] Built target SDFile_test
make  -f test/CMakeFiles/NumericalIntegrator_test_autogen.dir/build.make test/CMakeFiles/NumericalIntegrator_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/NumericalIntegrator_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target NumericalIntegrator_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/NumericalIntegrator_test_autogen.dir/build.make test/CMakeFiles/NumericalIntegrator_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 75%] Automatic MOC for target NumericalIntegrator_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/NumericalIntegrator_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 75%] Built target NumericalIntegrator_test_autogen
make  -f test/CMakeFiles/NumericalIntegrator_test.dir/build.make test/CMakeFiles/NumericalIntegrator_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/NumericalIntegrator_test.dir/DependInfo.cmake --color=
Scanning dependencies of target NumericalIntegrator_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/NumericalIntegrator_test.dir/build.make test/CMakeFiles/NumericalIntegrator_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 75%] Building CXX object test/CMakeFiles/NumericalIntegrator_test.dir/NumericalIntegrator_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/NumericalIntegrator_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/NumericalIntegrator_test.dir/NumericalIntegrator_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/NumericalIntegrator_test_autogen/mocs_compilation.cpp
[ 75%] Building CXX object test/CMakeFiles/NumericalIntegrator_test.dir/NumericalIntegrator_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/NumericalIntegrator_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/NumericalIntegrator_test.dir/NumericalIntegrator_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/NumericalIntegrator_test.C
[ 75%] Linking CXX executable ../bin/TEST/NumericalIntegrator_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/NumericalIntegrator_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/NumericalIntegrator_test.dir/NumericalIntegrator_test_autogen/mocs_compilation.cpp.o CMakeFiles/NumericalIntegrator_test.dir/NumericalIntegrator_test.C.o -o ../bin/TEST/NumericalIntegrator_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
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make  -f test/CMakeFiles/LogStream_test_autogen.dir/build.make test/CMakeFiles/LogStream_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/LogStream_test_autogen.dir/DependInfo.cmake --color=
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make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/LogStream_test_autogen.dir/build.make test/CMakeFiles/LogStream_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 75%] Automatic MOC for target LogStream_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/LogStream_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
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make  -f test/CMakeFiles/LogStream_test.dir/build.make test/CMakeFiles/LogStream_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/LogStream_test.dir/DependInfo.cmake --color=
Scanning dependencies of target LogStream_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/LogStream_test.dir/build.make test/CMakeFiles/LogStream_test.dir/build
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[ 75%] Building CXX object test/CMakeFiles/LogStream_test.dir/LogStream_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/LogStream_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/LogStream_test.dir/LogStream_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/LogStream_test_autogen/mocs_compilation.cpp
[ 75%] Building CXX object test/CMakeFiles/LogStream_test.dir/LogStream_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/LogStream_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/LogStream_test.dir/LogStream_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/LogStream_test.C
[ 75%] Linking CXX executable ../bin/TEST/LogStream_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/LogStream_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/LogStream_test.dir/LogStream_test_autogen/mocs_compilation.cpp.o CMakeFiles/LogStream_test.dir/LogStream_test.C.o -o ../bin/TEST/LogStream_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 75%] Built target LogStream_test
make  -f test/CMakeFiles/TextPersistenceManager_test_autogen.dir/build.make test/CMakeFiles/TextPersistenceManager_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/TextPersistenceManager_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target TextPersistenceManager_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/TextPersistenceManager_test_autogen.dir/build.make test/CMakeFiles/TextPersistenceManager_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 75%] Automatic MOC for target TextPersistenceManager_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/TextPersistenceManager_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 75%] Built target TextPersistenceManager_test_autogen
make  -f test/CMakeFiles/TextPersistenceManager_test.dir/build.make test/CMakeFiles/TextPersistenceManager_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/TextPersistenceManager_test.dir/DependInfo.cmake --color=
Scanning dependencies of target TextPersistenceManager_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/TextPersistenceManager_test.dir/build.make test/CMakeFiles/TextPersistenceManager_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 75%] Building CXX object test/CMakeFiles/TextPersistenceManager_test.dir/TextPersistenceManager_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/TextPersistenceManager_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/TextPersistenceManager_test.dir/TextPersistenceManager_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/TextPersistenceManager_test_autogen/mocs_compilation.cpp
[ 75%] Building CXX object test/CMakeFiles/TextPersistenceManager_test.dir/TextPersistenceManager_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/TextPersistenceManager_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/TextPersistenceManager_test.dir/TextPersistenceManager_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/TextPersistenceManager_test.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/secondaryStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBdefs.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/TextPersistenceManager_test.C:12:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/textPersistenceManager.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/TextPersistenceManager_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/secondaryStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBdefs.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/TextPersistenceManager_test.C:12:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/textPersistenceManager.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/TextPersistenceManager_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/secondaryStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBdefs.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/TextPersistenceManager_test.C:12:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/textPersistenceManager.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/TextPersistenceManager_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 75%] Linking CXX executable ../bin/TEST/TextPersistenceManager_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/TextPersistenceManager_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/TextPersistenceManager_test.dir/TextPersistenceManager_test_autogen/mocs_compilation.cpp.o CMakeFiles/TextPersistenceManager_test.dir/TextPersistenceManager_test.C.o -o ../bin/TEST/TextPersistenceManager_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 75%] Built target TextPersistenceManager_test
make  -f test/CMakeFiles/Object_test_autogen.dir/build.make test/CMakeFiles/Object_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/Object_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target Object_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/Object_test_autogen.dir/build.make test/CMakeFiles/Object_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 75%] Automatic MOC for target Object_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/Object_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 75%] Built target Object_test_autogen
make  -f test/CMakeFiles/Object_test.dir/build.make test/CMakeFiles/Object_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/Object_test.dir/DependInfo.cmake --color=
Scanning dependencies of target Object_test
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make  -f test/CMakeFiles/Object_test.dir/build.make test/CMakeFiles/Object_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 76%] Building CXX object test/CMakeFiles/Object_test.dir/Object_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/Object_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Object_test.dir/Object_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/Object_test_autogen/mocs_compilation.cpp
[ 76%] Building CXX object test/CMakeFiles/Object_test.dir/Object_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/Object_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Object_test.dir/Object_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Object_test.C
[ 76%] Linking CXX executable ../bin/TEST/Object_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/Object_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Object_test.dir/Object_test_autogen/mocs_compilation.cpp.o CMakeFiles/Object_test.dir/Object_test.C.o -o ../bin/TEST/Object_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 76%] Built target Object_test
make  -f test/CMakeFiles/HashMap_test_autogen.dir/build.make test/CMakeFiles/HashMap_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/HashMap_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target HashMap_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/HashMap_test_autogen.dir/build.make test/CMakeFiles/HashMap_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 76%] Automatic MOC for target HashMap_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/HashMap_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 76%] Built target HashMap_test_autogen
make  -f test/CMakeFiles/HashMap_test.dir/build.make test/CMakeFiles/HashMap_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/HashMap_test.dir/DependInfo.cmake --color=
Scanning dependencies of target HashMap_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/HashMap_test.dir/build.make test/CMakeFiles/HashMap_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 76%] Building CXX object test/CMakeFiles/HashMap_test.dir/HashMap_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/HashMap_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/HashMap_test.dir/HashMap_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/HashMap_test_autogen/mocs_compilation.cpp
[ 76%] Building CXX object test/CMakeFiles/HashMap_test.dir/HashMap_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/HashMap_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/HashMap_test.dir/HashMap_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/HashMap_test.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ItemCollector.h:6,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/HashMap_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ItemCollector.h:6,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/HashMap_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ItemCollector.h:6,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/HashMap_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ItemCollector.h:6,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/HashMap_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ItemCollector.h:6,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/HashMap_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ItemCollector.h:6,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/HashMap_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 76%] Linking CXX executable ../bin/TEST/HashMap_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/HashMap_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/HashMap_test.dir/HashMap_test_autogen/mocs_compilation.cpp.o CMakeFiles/HashMap_test.dir/HashMap_test.C.o -o ../bin/TEST/HashMap_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 76%] Built target HashMap_test
make  -f test/CMakeFiles/ClassTest_test_autogen.dir/build.make test/CMakeFiles/ClassTest_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/ClassTest_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target ClassTest_test_autogen
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cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/ClassTest_test_autogen.dir/AutogenInfo.json Release
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cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/ClassTest_test.dir/DependInfo.cmake --color=
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cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/ClassTest_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/ClassTest_test.dir/ClassTest_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/ClassTest_test_autogen/mocs_compilation.cpp
[ 76%] Building CXX object test/CMakeFiles/ClassTest_test.dir/ClassTest_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/ClassTest_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/ClassTest_test.dir/ClassTest_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ClassTest_test.C
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/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/ClassTest_test.dir/ClassTest_test_autogen/mocs_compilation.cpp.o CMakeFiles/ClassTest_test.dir/ClassTest_test.C.o -o ../bin/TEST/ClassTest_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
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[ 76%] Built target AtomContainer_test1_autogen
make  -f test/CMakeFiles/AtomContainer_test1.dir/build.make test/CMakeFiles/AtomContainer_test1.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/AtomContainer_test1.dir/DependInfo.cmake --color=
Scanning dependencies of target AtomContainer_test1
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/AtomContainer_test1.dir/build.make test/CMakeFiles/AtomContainer_test1.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 76%] Building CXX object test/CMakeFiles/AtomContainer_test1.dir/AtomContainer_test1_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/AtomContainer_test1_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/AtomContainer_test1.dir/AtomContainer_test1_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/AtomContainer_test1_autogen/mocs_compilation.cpp
[ 76%] Building CXX object test/CMakeFiles/AtomContainer_test1.dir/AtomContainer_test1.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/AtomContainer_test1_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/AtomContainer_test1.dir/AtomContainer_test1.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AtomContainer_test1.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AtomContainer_test1.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AtomContainer_test1.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AtomContainer_test1.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AtomContainer_test1.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AtomContainer_test1.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AtomContainer_test1.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 76%] Linking CXX executable ../bin/TEST/AtomContainer_test1
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/AtomContainer_test1.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/AtomContainer_test1.dir/AtomContainer_test1_autogen/mocs_compilation.cpp.o CMakeFiles/AtomContainer_test1.dir/AtomContainer_test1.C.o -o ../bin/TEST/AtomContainer_test1  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 76%] Built target AtomContainer_test1
make  -f test/CMakeFiles/PoseClustering_test2_autogen.dir/build.make test/CMakeFiles/PoseClustering_test2_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/PoseClustering_test2_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target PoseClustering_test2_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/PoseClustering_test2_autogen.dir/build.make test/CMakeFiles/PoseClustering_test2_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 76%] Automatic MOC for target PoseClustering_test2
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/PoseClustering_test2_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 76%] Built target PoseClustering_test2_autogen
make  -f test/CMakeFiles/PoseClustering_test2.dir/build.make test/CMakeFiles/PoseClustering_test2.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/PoseClustering_test2.dir/DependInfo.cmake --color=
Scanning dependencies of target PoseClustering_test2
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/PoseClustering_test2.dir/build.make test/CMakeFiles/PoseClustering_test2.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 76%] Building CXX object test/CMakeFiles/PoseClustering_test2.dir/PoseClustering_test2_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/PoseClustering_test2_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/PoseClustering_test2.dir/PoseClustering_test2_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/PoseClustering_test2_autogen/mocs_compilation.cpp
[ 76%] Building CXX object test/CMakeFiles/PoseClustering_test2.dir/PoseClustering_test2.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/PoseClustering_test2_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/PoseClustering_test2.dir/PoseClustering_test2.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/PoseClustering_test2.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/conformationSet.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/poseClustering.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/PoseClustering_test2.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/poseClustering.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/PoseClustering_test2.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/conformationSet.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/poseClustering.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/PoseClustering_test2.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/poseClustering.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/PoseClustering_test2.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/conformationSet.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/poseClustering.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/PoseClustering_test2.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/poseClustering.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/PoseClustering_test2.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 76%] Linking CXX executable ../bin/TEST/PoseClustering_test2
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/PoseClustering_test2.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/PoseClustering_test2.dir/PoseClustering_test2_autogen/mocs_compilation.cpp.o CMakeFiles/PoseClustering_test2.dir/PoseClustering_test2.C.o -o ../bin/TEST/PoseClustering_test2  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 76%] Built target PoseClustering_test2
make  -f test/CMakeFiles/AtomVector_test_autogen.dir/build.make test/CMakeFiles/AtomVector_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/AtomVector_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target AtomVector_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/AtomVector_test_autogen.dir/build.make test/CMakeFiles/AtomVector_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 76%] Automatic MOC for target AtomVector_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/AtomVector_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 76%] Built target AtomVector_test_autogen
make  -f test/CMakeFiles/AtomVector_test.dir/build.make test/CMakeFiles/AtomVector_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/AtomVector_test.dir/DependInfo.cmake --color=
Scanning dependencies of target AtomVector_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/AtomVector_test.dir/build.make test/CMakeFiles/AtomVector_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 76%] Building CXX object test/CMakeFiles/AtomVector_test.dir/AtomVector_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/AtomVector_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/AtomVector_test.dir/AtomVector_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/AtomVector_test_autogen/mocs_compilation.cpp
[ 76%] Building CXX object test/CMakeFiles/AtomVector_test.dir/AtomVector_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/AtomVector_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/AtomVector_test.dir/AtomVector_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AtomVector_test.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/molecule.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AtomVector_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/atomVector.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AtomVector_test.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/molecule.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AtomVector_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/atomVector.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AtomVector_test.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/molecule.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AtomVector_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/atomVector.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AtomVector_test.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 76%] Linking CXX executable ../bin/TEST/AtomVector_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/AtomVector_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/AtomVector_test.dir/AtomVector_test_autogen/mocs_compilation.cpp.o CMakeFiles/AtomVector_test.dir/AtomVector_test.C.o -o ../bin/TEST/AtomVector_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 76%] Built target AtomVector_test
make  -f test/CMakeFiles/ForceField_test_autogen.dir/build.make test/CMakeFiles/ForceField_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/ForceField_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target ForceField_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/ForceField_test_autogen.dir/build.make test/CMakeFiles/ForceField_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 76%] Automatic MOC for target ForceField_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/ForceField_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 76%] Built target ForceField_test_autogen
make  -f test/CMakeFiles/ForceField_test.dir/build.make test/CMakeFiles/ForceField_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/ForceField_test.dir/DependInfo.cmake --color=
Scanning dependencies of target ForceField_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/ForceField_test.dir/build.make test/CMakeFiles/ForceField_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 76%] Building CXX object test/CMakeFiles/ForceField_test.dir/ForceField_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/ForceField_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/ForceField_test.dir/ForceField_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/ForceField_test_autogen/mocs_compilation.cpp
[ 76%] Building CXX object test/CMakeFiles/ForceField_test.dir/ForceField_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/ForceField_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/ForceField_test.dir/ForceField_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ForceField_test.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceField.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ForceField_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceField.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ForceField_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceField.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ForceField_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceField.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ForceField_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceField.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ForceField_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceField.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ForceField_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 76%] Linking CXX executable ../bin/TEST/ForceField_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/ForceField_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/ForceField_test.dir/ForceField_test_autogen/mocs_compilation.cpp.o CMakeFiles/ForceField_test.dir/ForceField_test.C.o -o ../bin/TEST/ForceField_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 76%] Built target ForceField_test
make  -f test/CMakeFiles/String_test2_autogen.dir/build.make test/CMakeFiles/String_test2_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/String_test2_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target String_test2_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/String_test2_autogen.dir/build.make test/CMakeFiles/String_test2_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 76%] Automatic MOC for target String_test2
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/String_test2_autogen.dir/AutogenInfo.json Release
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[ 76%] Built target String_test2_autogen
make  -f test/CMakeFiles/String_test2.dir/build.make test/CMakeFiles/String_test2.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/String_test2.dir/DependInfo.cmake --color=
Scanning dependencies of target String_test2
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/String_test2.dir/build.make test/CMakeFiles/String_test2.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 76%] Building CXX object test/CMakeFiles/String_test2.dir/String_test2_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/String_test2_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/String_test2.dir/String_test2_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/String_test2_autogen/mocs_compilation.cpp
[ 76%] Building CXX object test/CMakeFiles/String_test2.dir/String_test2.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/String_test2_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/String_test2.dir/String_test2.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/String_test2.C
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/String_test2.C: In function 'int main(int, char**)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/String_test2.C:21:9: warning: unused variable 's' [-Wunused-variable]
   21 | String* s;
      |         ^
[ 76%] Linking CXX executable ../bin/TEST/String_test2
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/String_test2.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/String_test2.dir/String_test2_autogen/mocs_compilation.cpp.o CMakeFiles/String_test2.dir/String_test2.C.o -o ../bin/TEST/String_test2  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
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make  -f test/CMakeFiles/MOL2File_test_autogen.dir/build.make test/CMakeFiles/MOL2File_test_autogen.dir/depend
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cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/MOL2File_test_autogen.dir/DependInfo.cmake --color=
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[ 76%] Automatic MOC for target MOL2File_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/MOL2File_test_autogen.dir/AutogenInfo.json Release
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[ 76%] Built target MOL2File_test_autogen
make  -f test/CMakeFiles/MOL2File_test.dir/build.make test/CMakeFiles/MOL2File_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/MOL2File_test.dir/DependInfo.cmake --color=
Scanning dependencies of target MOL2File_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/MOL2File_test.dir/build.make test/CMakeFiles/MOL2File_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 76%] Building CXX object test/CMakeFiles/MOL2File_test.dir/MOL2File_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/MOL2File_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/MOL2File_test.dir/MOL2File_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/MOL2File_test_autogen/mocs_compilation.cpp
[ 76%] Building CXX object test/CMakeFiles/MOL2File_test.dir/MOL2File_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/MOL2File_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/MOL2File_test.dir/MOL2File_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/MOL2File_test.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/MOL2File.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/MOL2File_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/MOL2File.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/MOL2File_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/MOL2File.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/MOL2File_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/MOL2File.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/MOL2File_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/MOL2File.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/MOL2File_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/MOL2File.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/MOL2File_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 76%] Linking CXX executable ../bin/TEST/MOL2File_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/MOL2File_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/MOL2File_test.dir/MOL2File_test_autogen/mocs_compilation.cpp.o CMakeFiles/MOL2File_test.dir/MOL2File_test.C.o -o ../bin/TEST/MOL2File_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 76%] Built target MOL2File_test
make  -f test/CMakeFiles/AnalyticalGeometry_test_autogen.dir/build.make test/CMakeFiles/AnalyticalGeometry_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/AnalyticalGeometry_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target AnalyticalGeometry_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/AnalyticalGeometry_test_autogen.dir/build.make test/CMakeFiles/AnalyticalGeometry_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 76%] Automatic MOC for target AnalyticalGeometry_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/AnalyticalGeometry_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 76%] Built target AnalyticalGeometry_test_autogen
make  -f test/CMakeFiles/AnalyticalGeometry_test.dir/build.make test/CMakeFiles/AnalyticalGeometry_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/AnalyticalGeometry_test.dir/DependInfo.cmake --color=
Scanning dependencies of target AnalyticalGeometry_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/AnalyticalGeometry_test.dir/build.make test/CMakeFiles/AnalyticalGeometry_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 76%] Building CXX object test/CMakeFiles/AnalyticalGeometry_test.dir/AnalyticalGeometry_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/AnalyticalGeometry_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/AnalyticalGeometry_test.dir/AnalyticalGeometry_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/AnalyticalGeometry_test_autogen/mocs_compilation.cpp
[ 76%] Building CXX object test/CMakeFiles/AnalyticalGeometry_test.dir/AnalyticalGeometry_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/AnalyticalGeometry_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/AnalyticalGeometry_test.dir/AnalyticalGeometry_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AnalyticalGeometry_test.C
[ 76%] Linking CXX executable ../bin/TEST/AnalyticalGeometry_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/AnalyticalGeometry_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/AnalyticalGeometry_test.dir/AnalyticalGeometry_test_autogen/mocs_compilation.cpp.o CMakeFiles/AnalyticalGeometry_test.dir/AnalyticalGeometry_test.C.o -o ../bin/TEST/AnalyticalGeometry_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 76%] Built target AnalyticalGeometry_test
make  -f test/CMakeFiles/RDFIntegrator_test_autogen.dir/build.make test/CMakeFiles/RDFIntegrator_test_autogen.dir/depend
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cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/RDFIntegrator_test_autogen.dir/DependInfo.cmake --color=
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[ 76%] Automatic MOC for target RDFIntegrator_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/RDFIntegrator_test_autogen.dir/AutogenInfo.json Release
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make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/RDFIntegrator_test.dir/DependInfo.cmake --color=
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cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/RDFIntegrator_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/RDFIntegrator_test.dir/RDFIntegrator_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/RDFIntegrator_test_autogen/mocs_compilation.cpp
[ 76%] Building CXX object test/CMakeFiles/RDFIntegrator_test.dir/RDFIntegrator_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/RDFIntegrator_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/RDFIntegrator_test.dir/RDFIntegrator_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/RDFIntegrator_test.C
[ 76%] Linking CXX executable ../bin/TEST/RDFIntegrator_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/RDFIntegrator_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/RDFIntegrator_test.dir/RDFIntegrator_test_autogen/mocs_compilation.cpp.o CMakeFiles/RDFIntegrator_test.dir/RDFIntegrator_test.C.o -o ../bin/TEST/RDFIntegrator_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 76%] Built target RDFIntegrator_test
make  -f test/CMakeFiles/ShiftModule_test_autogen.dir/build.make test/CMakeFiles/ShiftModule_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/ShiftModule_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target ShiftModule_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/ShiftModule_test_autogen.dir/build.make test/CMakeFiles/ShiftModule_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 76%] Automatic MOC for target ShiftModule_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/ShiftModule_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 76%] Built target ShiftModule_test_autogen
make  -f test/CMakeFiles/ShiftModule_test.dir/build.make test/CMakeFiles/ShiftModule_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/ShiftModule_test.dir/DependInfo.cmake --color=
Scanning dependencies of target ShiftModule_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/ShiftModule_test.dir/build.make test/CMakeFiles/ShiftModule_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 76%] Building CXX object test/CMakeFiles/ShiftModule_test.dir/ShiftModule_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/ShiftModule_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/ShiftModule_test.dir/ShiftModule_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/ShiftModule_test_autogen/mocs_compilation.cpp
[ 76%] Building CXX object test/CMakeFiles/ShiftModule_test.dir/ShiftModule_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/ShiftModule_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/ShiftModule_test.dir/ShiftModule_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ShiftModule_test.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/shiftModule.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ShiftModule_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/shiftModule.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ShiftModule_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/shiftModule.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ShiftModule_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/shiftModule.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ShiftModule_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/shiftModule.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ShiftModule_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/shiftModule.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ShiftModule_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 76%] Linking CXX executable ../bin/TEST/ShiftModule_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/ShiftModule_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/ShiftModule_test.dir/ShiftModule_test_autogen/mocs_compilation.cpp.o CMakeFiles/ShiftModule_test.dir/ShiftModule_test.C.o -o ../bin/TEST/ShiftModule_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 76%] Built target ShiftModule_test
make  -f test/CMakeFiles/ConstForwardIterator_test_autogen.dir/build.make test/CMakeFiles/ConstForwardIterator_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/ConstForwardIterator_test_autogen.dir/DependInfo.cmake --color=
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[ 76%] Automatic MOC for target ConstForwardIterator_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/ConstForwardIterator_test_autogen.dir/AutogenInfo.json Release
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cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/ConstForwardIterator_test.dir/DependInfo.cmake --color=
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cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/ConstForwardIterator_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/ConstForwardIterator_test.dir/ConstForwardIterator_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/ConstForwardIterator_test_autogen/mocs_compilation.cpp
[ 76%] Building CXX object test/CMakeFiles/ConstForwardIterator_test.dir/ConstForwardIterator_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/ConstForwardIterator_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/ConstForwardIterator_test.dir/ConstForwardIterator_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ConstForwardIterator_test.C
[ 76%] Linking CXX executable ../bin/TEST/ConstForwardIterator_test
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/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/ConstForwardIterator_test.dir/ConstForwardIterator_test_autogen/mocs_compilation.cpp.o CMakeFiles/ConstForwardIterator_test.dir/ConstForwardIterator_test.C.o -o ../bin/TEST/ConstForwardIterator_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
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cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/Triple_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Triple_test.dir/Triple_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/Triple_test_autogen/mocs_compilation.cpp
[ 76%] Building CXX object test/CMakeFiles/Triple_test.dir/Triple_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/Triple_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Triple_test.dir/Triple_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Triple_test.C
[ 76%] Linking CXX executable ../bin/TEST/Triple_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/Triple_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Triple_test.dir/Triple_test_autogen/mocs_compilation.cpp.o CMakeFiles/Triple_test.dir/Triple_test.C.o -o ../bin/TEST/Triple_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 76%] Built target Triple_test
make  -f test/CMakeFiles/RandomAccessIterator_test_autogen.dir/build.make test/CMakeFiles/RandomAccessIterator_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/RandomAccessIterator_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target RandomAccessIterator_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/RandomAccessIterator_test_autogen.dir/build.make test/CMakeFiles/RandomAccessIterator_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 76%] Automatic MOC for target RandomAccessIterator_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/RandomAccessIterator_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 76%] Built target RandomAccessIterator_test_autogen
make  -f test/CMakeFiles/RandomAccessIterator_test.dir/build.make test/CMakeFiles/RandomAccessIterator_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/RandomAccessIterator_test.dir/DependInfo.cmake --color=
Scanning dependencies of target RandomAccessIterator_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/RandomAccessIterator_test.dir/build.make test/CMakeFiles/RandomAccessIterator_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 76%] Building CXX object test/CMakeFiles/RandomAccessIterator_test.dir/RandomAccessIterator_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/RandomAccessIterator_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/RandomAccessIterator_test.dir/RandomAccessIterator_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/RandomAccessIterator_test_autogen/mocs_compilation.cpp
[ 76%] Building CXX object test/CMakeFiles/RandomAccessIterator_test.dir/RandomAccessIterator_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/RandomAccessIterator_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/RandomAccessIterator_test.dir/RandomAccessIterator_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/RandomAccessIterator_test.C
[ 76%] Linking CXX executable ../bin/TEST/RandomAccessIterator_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/RandomAccessIterator_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/RandomAccessIterator_test.dir/RandomAccessIterator_test_autogen/mocs_compilation.cpp.o CMakeFiles/RandomAccessIterator_test.dir/RandomAccessIterator_test.C.o -o ../bin/TEST/RandomAccessIterator_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 76%] Built target RandomAccessIterator_test
make  -f test/CMakeFiles/ContourLine_test_autogen.dir/build.make test/CMakeFiles/ContourLine_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/ContourLine_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target ContourLine_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/ContourLine_test_autogen.dir/build.make test/CMakeFiles/ContourLine_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 77%] Automatic MOC for target ContourLine_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/ContourLine_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 77%] Built target ContourLine_test_autogen
make  -f test/CMakeFiles/ContourLine_test.dir/build.make test/CMakeFiles/ContourLine_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/ContourLine_test.dir/DependInfo.cmake --color=
Scanning dependencies of target ContourLine_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/ContourLine_test.dir/build.make test/CMakeFiles/ContourLine_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 77%] Building CXX object test/CMakeFiles/ContourLine_test.dir/ContourLine_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/ContourLine_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/ContourLine_test.dir/ContourLine_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/ContourLine_test_autogen/mocs_compilation.cpp
[ 77%] Building CXX object test/CMakeFiles/ContourLine_test.dir/ContourLine_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/ContourLine_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/ContourLine_test.dir/ContourLine_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ContourLine_test.C
[ 77%] Linking CXX executable ../bin/TEST/ContourLine_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/ContourLine_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/ContourLine_test.dir/ContourLine_test_autogen/mocs_compilation.cpp.o CMakeFiles/ContourLine_test.dir/ContourLine_test.C.o -o ../bin/TEST/ContourLine_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 77%] Built target ContourLine_test
make  -f test/CMakeFiles/Embeddable_test_autogen.dir/build.make test/CMakeFiles/Embeddable_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/Embeddable_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target Embeddable_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
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make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
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cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/Embeddable_test_autogen.dir/AutogenInfo.json Release
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cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/Embeddable_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Embeddable_test.dir/Embeddable_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/Embeddable_test_autogen/mocs_compilation.cpp
[ 77%] Building CXX object test/CMakeFiles/Embeddable_test.dir/Embeddable_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/Embeddable_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Embeddable_test.dir/Embeddable_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Embeddable_test.C
[ 77%] Linking CXX executable ../bin/TEST/Embeddable_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/Embeddable_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Embeddable_test.dir/Embeddable_test_autogen/mocs_compilation.cpp.o CMakeFiles/Embeddable_test.dir/Embeddable_test.C.o -o ../bin/TEST/Embeddable_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 77%] Built target Embeddable_test
make  -f test/CMakeFiles/SteepestDescentMinimizer_test_autogen.dir/build.make test/CMakeFiles/SteepestDescentMinimizer_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/SteepestDescentMinimizer_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target SteepestDescentMinimizer_test_autogen
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make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 77%] Automatic MOC for target SteepestDescentMinimizer_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/SteepestDescentMinimizer_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 77%] Built target SteepestDescentMinimizer_test_autogen
make  -f test/CMakeFiles/SteepestDescentMinimizer_test.dir/build.make test/CMakeFiles/SteepestDescentMinimizer_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/SteepestDescentMinimizer_test.dir/DependInfo.cmake --color=
Scanning dependencies of target SteepestDescentMinimizer_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/SteepestDescentMinimizer_test.dir/build.make test/CMakeFiles/SteepestDescentMinimizer_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 77%] Building CXX object test/CMakeFiles/SteepestDescentMinimizer_test.dir/SteepestDescentMinimizer_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/SteepestDescentMinimizer_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/SteepestDescentMinimizer_test.dir/SteepestDescentMinimizer_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/SteepestDescentMinimizer_test_autogen/mocs_compilation.cpp
[ 77%] Building CXX object test/CMakeFiles/SteepestDescentMinimizer_test.dir/SteepestDescentMinimizer_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/SteepestDescentMinimizer_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/SteepestDescentMinimizer_test.dir/SteepestDescentMinimizer_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/SteepestDescentMinimizer_test.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceField.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/AMBER/amber.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/SteepestDescentMinimizer_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MINIMIZATION/energyMinimizer.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MINIMIZATION/steepestDescent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/SteepestDescentMinimizer_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceField.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/AMBER/amber.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/SteepestDescentMinimizer_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MINIMIZATION/energyMinimizer.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MINIMIZATION/steepestDescent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/SteepestDescentMinimizer_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceField.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/AMBER/amber.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/SteepestDescentMinimizer_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MINIMIZATION/energyMinimizer.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MINIMIZATION/steepestDescent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/SteepestDescentMinimizer_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/SteepestDescentMinimizer_test.C: In function 'int main(int, char**)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/SteepestDescentMinimizer_test.C:245:26: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  245 |  for (atit = S.beginAtom(); +atit; ++atit)
      |                          ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MINIMIZATION/energyMinimizer.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MINIMIZATION/steepestDescent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/SteepestDescentMinimizer_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/SteepestDescentMinimizer_test.C: In function 'int main(int, char**)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/SteepestDescentMinimizer_test.C:245:26: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' first required here
  245 |  for (atit = S.beginAtom(); +atit; ++atit)
      |                          ^
[ 77%] Linking CXX executable ../bin/TEST/SteepestDescentMinimizer_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/SteepestDescentMinimizer_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/SteepestDescentMinimizer_test.dir/SteepestDescentMinimizer_test_autogen/mocs_compilation.cpp.o CMakeFiles/SteepestDescentMinimizer_test.dir/SteepestDescentMinimizer_test.C.o -o ../bin/TEST/SteepestDescentMinimizer_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
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cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/ParameterSection_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/ParameterSection_test.dir/ParameterSection_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/ParameterSection_test_autogen/mocs_compilation.cpp
[ 77%] Building CXX object test/CMakeFiles/ParameterSection_test.dir/ParameterSection_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/ParameterSection_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/ParameterSection_test.dir/ParameterSection_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ParameterSection_test.C
[ 77%] Linking CXX executable ../bin/TEST/ParameterSection_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/ParameterSection_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/ParameterSection_test.dir/ParameterSection_test_autogen/mocs_compilation.cpp.o CMakeFiles/ParameterSection_test.dir/ParameterSection_test.C.o -o ../bin/TEST/ParameterSection_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 77%] Built target ParameterSection_test
make  -f test/CMakeFiles/SecondaryStructure_test_autogen.dir/build.make test/CMakeFiles/SecondaryStructure_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/SecondaryStructure_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target SecondaryStructure_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/SecondaryStructure_test_autogen.dir/build.make test/CMakeFiles/SecondaryStructure_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 78%] Automatic MOC for target SecondaryStructure_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/SecondaryStructure_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 78%] Built target SecondaryStructure_test_autogen
make  -f test/CMakeFiles/SecondaryStructure_test.dir/build.make test/CMakeFiles/SecondaryStructure_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/SecondaryStructure_test.dir/DependInfo.cmake --color=
Scanning dependencies of target SecondaryStructure_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/SecondaryStructure_test.dir/build.make test/CMakeFiles/SecondaryStructure_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 78%] Building CXX object test/CMakeFiles/SecondaryStructure_test.dir/SecondaryStructure_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/SecondaryStructure_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/SecondaryStructure_test.dir/SecondaryStructure_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/SecondaryStructure_test_autogen/mocs_compilation.cpp
[ 78%] Building CXX object test/CMakeFiles/SecondaryStructure_test.dir/SecondaryStructure_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/SecondaryStructure_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/SecondaryStructure_test.dir/SecondaryStructure_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/SecondaryStructure_test.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/SecondaryStructure_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/SecondaryStructure_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/SecondaryStructure_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/SecondaryStructure_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/SecondaryStructure_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/SecondaryStructure_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 78%] Linking CXX executable ../bin/TEST/SecondaryStructure_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/SecondaryStructure_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/SecondaryStructure_test.dir/SecondaryStructure_test_autogen/mocs_compilation.cpp.o CMakeFiles/SecondaryStructure_test.dir/SecondaryStructure_test.C.o -o ../bin/TEST/SecondaryStructure_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 78%] Built target SecondaryStructure_test
make  -f test/CMakeFiles/CompositeChildcompositeIteratorTraits_test_autogen.dir/build.make test/CMakeFiles/CompositeChildcompositeIteratorTraits_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/CompositeChildcompositeIteratorTraits_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target CompositeChildcompositeIteratorTraits_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/CompositeChildcompositeIteratorTraits_test_autogen.dir/build.make test/CMakeFiles/CompositeChildcompositeIteratorTraits_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 78%] Automatic MOC for target CompositeChildcompositeIteratorTraits_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/CompositeChildcompositeIteratorTraits_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 78%] Built target CompositeChildcompositeIteratorTraits_test_autogen
make  -f test/CMakeFiles/CompositeChildcompositeIteratorTraits_test.dir/build.make test/CMakeFiles/CompositeChildcompositeIteratorTraits_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/CompositeChildcompositeIteratorTraits_test.dir/DependInfo.cmake --color=
Scanning dependencies of target CompositeChildcompositeIteratorTraits_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/CompositeChildcompositeIteratorTraits_test.dir/build.make test/CMakeFiles/CompositeChildcompositeIteratorTraits_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 78%] Building CXX object test/CMakeFiles/CompositeChildcompositeIteratorTraits_test.dir/CompositeChildcompositeIteratorTraits_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CompositeChildcompositeIteratorTraits_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/CompositeChildcompositeIteratorTraits_test.dir/CompositeChildcompositeIteratorTraits_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CompositeChildcompositeIteratorTraits_test_autogen/mocs_compilation.cpp
[ 78%] Building CXX object test/CMakeFiles/CompositeChildcompositeIteratorTraits_test.dir/CompositeChildcompositeIteratorTraits_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CompositeChildcompositeIteratorTraits_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/CompositeChildcompositeIteratorTraits_test.dir/CompositeChildcompositeIteratorTraits_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/CompositeChildcompositeIteratorTraits_test.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/CompositeChildcompositeIteratorTraits_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/CompositeChildcompositeIteratorTraits_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/CompositeChildcompositeIteratorTraits_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/CompositeChildcompositeIteratorTraits_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/CompositeChildcompositeIteratorTraits_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/CompositeChildcompositeIteratorTraits_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 78%] Linking CXX executable ../bin/TEST/CompositeChildcompositeIteratorTraits_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/CompositeChildcompositeIteratorTraits_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/CompositeChildcompositeIteratorTraits_test.dir/CompositeChildcompositeIteratorTraits_test_autogen/mocs_compilation.cpp.o CMakeFiles/CompositeChildcompositeIteratorTraits_test.dir/CompositeChildcompositeIteratorTraits_test.C.o -o ../bin/TEST/CompositeChildcompositeIteratorTraits_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 78%] Built target CompositeChildcompositeIteratorTraits_test
make  -f test/CMakeFiles/Sysinfo_test_autogen.dir/build.make test/CMakeFiles/Sysinfo_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/Sysinfo_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target Sysinfo_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/Sysinfo_test_autogen.dir/build.make test/CMakeFiles/Sysinfo_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 78%] Automatic MOC for target Sysinfo_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/Sysinfo_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 78%] Built target Sysinfo_test_autogen
make  -f test/CMakeFiles/Sysinfo_test.dir/build.make test/CMakeFiles/Sysinfo_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/Sysinfo_test.dir/DependInfo.cmake --color=
Scanning dependencies of target Sysinfo_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/Sysinfo_test.dir/build.make test/CMakeFiles/Sysinfo_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 78%] Building CXX object test/CMakeFiles/Sysinfo_test.dir/Sysinfo_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/Sysinfo_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Sysinfo_test.dir/Sysinfo_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/Sysinfo_test_autogen/mocs_compilation.cpp
[ 78%] Building CXX object test/CMakeFiles/Sysinfo_test.dir/Sysinfo_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/Sysinfo_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Sysinfo_test.dir/Sysinfo_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Sysinfo_test.C
[ 78%] Linking CXX executable ../bin/TEST/Sysinfo_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/Sysinfo_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Sysinfo_test.dir/Sysinfo_test_autogen/mocs_compilation.cpp.o CMakeFiles/Sysinfo_test.dir/Sysinfo_test.C.o -o ../bin/TEST/Sysinfo_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 78%] Built target Sysinfo_test
make  -f test/CMakeFiles/Descriptor_test_autogen.dir/build.make test/CMakeFiles/Descriptor_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/Descriptor_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target Descriptor_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/Descriptor_test_autogen.dir/build.make test/CMakeFiles/Descriptor_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 78%] Automatic MOC for target Descriptor_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/Descriptor_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 78%] Built target Descriptor_test_autogen
make  -f test/CMakeFiles/Descriptor_test.dir/build.make test/CMakeFiles/Descriptor_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/Descriptor_test.dir/DependInfo.cmake --color=
Scanning dependencies of target Descriptor_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/Descriptor_test.dir/build.make test/CMakeFiles/Descriptor_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 78%] Building CXX object test/CMakeFiles/Descriptor_test.dir/Descriptor_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/Descriptor_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Descriptor_test.dir/Descriptor_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/Descriptor_test_autogen/mocs_compilation.cpp
[ 78%] Building CXX object test/CMakeFiles/Descriptor_test.dir/Descriptor_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/Descriptor_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Descriptor_test.dir/Descriptor_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Descriptor_test.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/descriptor.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Descriptor_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/descriptor.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Descriptor_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/descriptor.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Descriptor_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/descriptor.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Descriptor_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/descriptor.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Descriptor_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/descriptor.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Descriptor_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 78%] Linking CXX executable ../bin/TEST/Descriptor_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/Descriptor_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Descriptor_test.dir/Descriptor_test_autogen/mocs_compilation.cpp.o CMakeFiles/Descriptor_test.dir/Descriptor_test.C.o -o ../bin/TEST/Descriptor_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 78%] Built target Descriptor_test
make  -f test/CMakeFiles/Molecule_test_autogen.dir/build.make test/CMakeFiles/Molecule_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/Molecule_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target Molecule_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/Molecule_test_autogen.dir/build.make test/CMakeFiles/Molecule_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 78%] Automatic MOC for target Molecule_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/Molecule_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 78%] Built target Molecule_test_autogen
make  -f test/CMakeFiles/Molecule_test.dir/build.make test/CMakeFiles/Molecule_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/Molecule_test.dir/DependInfo.cmake --color=
Scanning dependencies of target Molecule_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/Molecule_test.dir/build.make test/CMakeFiles/Molecule_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 78%] Building CXX object test/CMakeFiles/Molecule_test.dir/Molecule_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/Molecule_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Molecule_test.dir/Molecule_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/Molecule_test_autogen/mocs_compilation.cpp
[ 78%] Building CXX object test/CMakeFiles/Molecule_test.dir/Molecule_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/Molecule_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Molecule_test.dir/Molecule_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Molecule_test.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/molecule.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Molecule_test.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Molecule_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/molecule.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Molecule_test.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Molecule_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/molecule.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Molecule_test.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Molecule_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 78%] Linking CXX executable ../bin/TEST/Molecule_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/Molecule_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Molecule_test.dir/Molecule_test_autogen/mocs_compilation.cpp.o CMakeFiles/Molecule_test.dir/Molecule_test.C.o -o ../bin/TEST/Molecule_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 78%] Built target Molecule_test
make  -f test/CMakeFiles/Quadruple_test_autogen.dir/build.make test/CMakeFiles/Quadruple_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/Quadruple_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target Quadruple_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/Quadruple_test_autogen.dir/build.make test/CMakeFiles/Quadruple_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 78%] Automatic MOC for target Quadruple_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/Quadruple_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 78%] Built target Quadruple_test_autogen
make  -f test/CMakeFiles/Quadruple_test.dir/build.make test/CMakeFiles/Quadruple_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/Quadruple_test.dir/DependInfo.cmake --color=
Scanning dependencies of target Quadruple_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/Quadruple_test.dir/build.make test/CMakeFiles/Quadruple_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 78%] Building CXX object test/CMakeFiles/Quadruple_test.dir/Quadruple_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/Quadruple_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Quadruple_test.dir/Quadruple_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/Quadruple_test_autogen/mocs_compilation.cpp
[ 78%] Building CXX object test/CMakeFiles/Quadruple_test.dir/Quadruple_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/Quadruple_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Quadruple_test.dir/Quadruple_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Quadruple_test.C
[ 78%] Linking CXX executable ../bin/TEST/Quadruple_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/Quadruple_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Quadruple_test.dir/Quadruple_test_autogen/mocs_compilation.cpp.o CMakeFiles/Quadruple_test.dir/Quadruple_test.C.o -o ../bin/TEST/Quadruple_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 78%] Built target Quadruple_test
make  -f test/CMakeFiles/LineBasedFile_test_autogen.dir/build.make test/CMakeFiles/LineBasedFile_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/LineBasedFile_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target LineBasedFile_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/LineBasedFile_test_autogen.dir/build.make test/CMakeFiles/LineBasedFile_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 78%] Automatic MOC for target LineBasedFile_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/LineBasedFile_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 78%] Built target LineBasedFile_test_autogen
make  -f test/CMakeFiles/LineBasedFile_test.dir/build.make test/CMakeFiles/LineBasedFile_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/LineBasedFile_test.dir/DependInfo.cmake --color=
Scanning dependencies of target LineBasedFile_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/LineBasedFile_test.dir/build.make test/CMakeFiles/LineBasedFile_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 78%] Building CXX object test/CMakeFiles/LineBasedFile_test.dir/LineBasedFile_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/LineBasedFile_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/LineBasedFile_test.dir/LineBasedFile_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/LineBasedFile_test_autogen/mocs_compilation.cpp
[ 78%] Building CXX object test/CMakeFiles/LineBasedFile_test.dir/LineBasedFile_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/LineBasedFile_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/LineBasedFile_test.dir/LineBasedFile_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/LineBasedFile_test.C
[ 78%] Linking CXX executable ../bin/TEST/LineBasedFile_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/LineBasedFile_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/LineBasedFile_test.dir/LineBasedFile_test_autogen/mocs_compilation.cpp.o CMakeFiles/LineBasedFile_test.dir/LineBasedFile_test.C.o -o ../bin/TEST/LineBasedFile_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 78%] Built target LineBasedFile_test
make  -f test/CMakeFiles/HashGrid3BoxIteratorTraits_test_autogen.dir/build.make test/CMakeFiles/HashGrid3BoxIteratorTraits_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/HashGrid3BoxIteratorTraits_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target HashGrid3BoxIteratorTraits_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/HashGrid3BoxIteratorTraits_test_autogen.dir/build.make test/CMakeFiles/HashGrid3BoxIteratorTraits_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 78%] Automatic MOC for target HashGrid3BoxIteratorTraits_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/HashGrid3BoxIteratorTraits_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 78%] Built target HashGrid3BoxIteratorTraits_test_autogen
make  -f test/CMakeFiles/HashGrid3BoxIteratorTraits_test.dir/build.make test/CMakeFiles/HashGrid3BoxIteratorTraits_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/HashGrid3BoxIteratorTraits_test.dir/DependInfo.cmake --color=
Scanning dependencies of target HashGrid3BoxIteratorTraits_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/HashGrid3BoxIteratorTraits_test.dir/build.make test/CMakeFiles/HashGrid3BoxIteratorTraits_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 78%] Building CXX object test/CMakeFiles/HashGrid3BoxIteratorTraits_test.dir/HashGrid3BoxIteratorTraits_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/HashGrid3BoxIteratorTraits_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/HashGrid3BoxIteratorTraits_test.dir/HashGrid3BoxIteratorTraits_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/HashGrid3BoxIteratorTraits_test_autogen/mocs_compilation.cpp
[ 78%] Building CXX object test/CMakeFiles/HashGrid3BoxIteratorTraits_test.dir/HashGrid3BoxIteratorTraits_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/HashGrid3BoxIteratorTraits_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/HashGrid3BoxIteratorTraits_test.dir/HashGrid3BoxIteratorTraits_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/HashGrid3BoxIteratorTraits_test.C
[ 78%] Linking CXX executable ../bin/TEST/HashGrid3BoxIteratorTraits_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/HashGrid3BoxIteratorTraits_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/HashGrid3BoxIteratorTraits_test.dir/HashGrid3BoxIteratorTraits_test_autogen/mocs_compilation.cpp.o CMakeFiles/HashGrid3BoxIteratorTraits_test.dir/HashGrid3BoxIteratorTraits_test.C.o -o ../bin/TEST/HashGrid3BoxIteratorTraits_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 78%] Built target HashGrid3BoxIteratorTraits_test
make  -f test/CMakeFiles/TransformationManager_test_autogen.dir/build.make test/CMakeFiles/TransformationManager_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/TransformationManager_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target TransformationManager_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/TransformationManager_test_autogen.dir/build.make test/CMakeFiles/TransformationManager_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 78%] Automatic MOC for target TransformationManager_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/TransformationManager_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 78%] Built target TransformationManager_test_autogen
make  -f test/CMakeFiles/TransformationManager_test.dir/build.make test/CMakeFiles/TransformationManager_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/TransformationManager_test.dir/DependInfo.cmake --color=
Scanning dependencies of target TransformationManager_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/TransformationManager_test.dir/build.make test/CMakeFiles/TransformationManager_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 78%] Building CXX object test/CMakeFiles/TransformationManager_test.dir/TransformationManager_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/TransformationManager_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/TransformationManager_test.dir/TransformationManager_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/TransformationManager_test_autogen/mocs_compilation.cpp
[ 78%] Building CXX object test/CMakeFiles/TransformationManager_test.dir/TransformationManager_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/TransformationManager_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/TransformationManager_test.dir/TransformationManager_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/TransformationManager_test.C
[ 78%] Linking CXX executable ../bin/TEST/TransformationManager_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/TransformationManager_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/TransformationManager_test.dir/TransformationManager_test_autogen/mocs_compilation.cpp.o CMakeFiles/TransformationManager_test.dir/TransformationManager_test.C.o -o ../bin/TEST/TransformationManager_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 78%] Built target TransformationManager_test
make  -f test/CMakeFiles/ExpressionPredicate_test_autogen.dir/build.make test/CMakeFiles/ExpressionPredicate_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/ExpressionPredicate_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target ExpressionPredicate_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/ExpressionPredicate_test_autogen.dir/build.make test/CMakeFiles/ExpressionPredicate_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 78%] Automatic MOC for target ExpressionPredicate_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/ExpressionPredicate_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 78%] Built target ExpressionPredicate_test_autogen
make  -f test/CMakeFiles/ExpressionPredicate_test.dir/build.make test/CMakeFiles/ExpressionPredicate_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/ExpressionPredicate_test.dir/DependInfo.cmake --color=
Scanning dependencies of target ExpressionPredicate_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/ExpressionPredicate_test.dir/build.make test/CMakeFiles/ExpressionPredicate_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 78%] Building CXX object test/CMakeFiles/ExpressionPredicate_test.dir/ExpressionPredicate_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/ExpressionPredicate_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/ExpressionPredicate_test.dir/ExpressionPredicate_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/ExpressionPredicate_test_autogen/mocs_compilation.cpp
[ 78%] Building CXX object test/CMakeFiles/ExpressionPredicate_test.dir/ExpressionPredicate_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/ExpressionPredicate_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/ExpressionPredicate_test.dir/ExpressionPredicate_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ExpressionPredicate_test.C
[ 78%] Linking CXX executable ../bin/TEST/ExpressionPredicate_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/ExpressionPredicate_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/ExpressionPredicate_test.dir/ExpressionPredicate_test_autogen/mocs_compilation.cpp.o CMakeFiles/ExpressionPredicate_test.dir/ExpressionPredicate_test.C.o -o ../bin/TEST/ExpressionPredicate_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 78%] Built target ExpressionPredicate_test
make  -f test/CMakeFiles/LineSearch_test_autogen.dir/build.make test/CMakeFiles/LineSearch_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/LineSearch_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target LineSearch_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/LineSearch_test_autogen.dir/build.make test/CMakeFiles/LineSearch_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 78%] Automatic MOC for target LineSearch_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/LineSearch_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 78%] Built target LineSearch_test_autogen
make  -f test/CMakeFiles/LineSearch_test.dir/build.make test/CMakeFiles/LineSearch_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/LineSearch_test.dir/DependInfo.cmake --color=
Scanning dependencies of target LineSearch_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/LineSearch_test.dir/build.make test/CMakeFiles/LineSearch_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 78%] Building CXX object test/CMakeFiles/LineSearch_test.dir/LineSearch_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/LineSearch_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/LineSearch_test.dir/LineSearch_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/LineSearch_test_autogen/mocs_compilation.cpp
[ 78%] Building CXX object test/CMakeFiles/LineSearch_test.dir/LineSearch_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/LineSearch_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/LineSearch_test.dir/LineSearch_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/LineSearch_test.C
[ 80%] Linking CXX executable ../bin/TEST/LineSearch_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/LineSearch_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/LineSearch_test.dir/LineSearch_test_autogen/mocs_compilation.cpp.o CMakeFiles/LineSearch_test.dir/LineSearch_test.C.o -o ../bin/TEST/LineSearch_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 80%] Built target LineSearch_test
make  -f test/CMakeFiles/Bit_test_autogen.dir/build.make test/CMakeFiles/Bit_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/Bit_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target Bit_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/Bit_test_autogen.dir/build.make test/CMakeFiles/Bit_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 80%] Automatic MOC for target Bit_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/Bit_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 80%] Built target Bit_test_autogen
make  -f test/CMakeFiles/Bit_test.dir/build.make test/CMakeFiles/Bit_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/Bit_test.dir/DependInfo.cmake --color=
Scanning dependencies of target Bit_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/Bit_test.dir/build.make test/CMakeFiles/Bit_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 80%] Building CXX object test/CMakeFiles/Bit_test.dir/Bit_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/Bit_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Bit_test.dir/Bit_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/Bit_test_autogen/mocs_compilation.cpp
[ 80%] Building CXX object test/CMakeFiles/Bit_test.dir/Bit_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/Bit_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Bit_test.dir/Bit_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Bit_test.C
[ 80%] Linking CXX executable ../bin/TEST/Bit_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/Bit_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Bit_test.dir/Bit_test_autogen/mocs_compilation.cpp.o CMakeFiles/Bit_test.dir/Bit_test.C.o -o ../bin/TEST/Bit_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 80%] Built target Bit_test
make  -f test/CMakeFiles/Vector4_test_autogen.dir/build.make test/CMakeFiles/Vector4_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/Vector4_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target Vector4_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/Vector4_test_autogen.dir/build.make test/CMakeFiles/Vector4_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 80%] Automatic MOC for target Vector4_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/Vector4_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 80%] Built target Vector4_test_autogen
make  -f test/CMakeFiles/Vector4_test.dir/build.make test/CMakeFiles/Vector4_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/Vector4_test.dir/DependInfo.cmake --color=
Scanning dependencies of target Vector4_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/Vector4_test.dir/build.make test/CMakeFiles/Vector4_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 80%] Building CXX object test/CMakeFiles/Vector4_test.dir/Vector4_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/Vector4_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Vector4_test.dir/Vector4_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/Vector4_test_autogen/mocs_compilation.cpp
[ 80%] Building CXX object test/CMakeFiles/Vector4_test.dir/Vector4_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/Vector4_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Vector4_test.dir/Vector4_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Vector4_test.C
[ 80%] Linking CXX executable ../bin/TEST/Vector4_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/Vector4_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Vector4_test.dir/Vector4_test_autogen/mocs_compilation.cpp.o CMakeFiles/Vector4_test.dir/Vector4_test.C.o -o ../bin/TEST/Vector4_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 80%] Built target Vector4_test
make  -f test/CMakeFiles/String_test1_autogen.dir/build.make test/CMakeFiles/String_test1_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/String_test1_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target String_test1_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/String_test1_autogen.dir/build.make test/CMakeFiles/String_test1_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 80%] Automatic MOC for target String_test1
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/String_test1_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 80%] Built target String_test1_autogen
make  -f test/CMakeFiles/String_test1.dir/build.make test/CMakeFiles/String_test1.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/String_test1.dir/DependInfo.cmake --color=
Scanning dependencies of target String_test1
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/String_test1.dir/build.make test/CMakeFiles/String_test1.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 81%] Building CXX object test/CMakeFiles/String_test1.dir/String_test1_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/String_test1_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/String_test1.dir/String_test1_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/String_test1_autogen/mocs_compilation.cpp
[ 81%] Building CXX object test/CMakeFiles/String_test1.dir/String_test1.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/String_test1_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/String_test1.dir/String_test1.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/String_test1.C
[ 81%] Linking CXX executable ../bin/TEST/String_test1
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/String_test1.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/String_test1.dir/String_test1_autogen/mocs_compilation.cpp.o CMakeFiles/String_test1.dir/String_test1.C.o -o ../bin/TEST/String_test1  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 81%] Built target String_test1
make  -f test/CMakeFiles/KernelPredicate_test_autogen.dir/build.make test/CMakeFiles/KernelPredicate_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/KernelPredicate_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target KernelPredicate_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/KernelPredicate_test_autogen.dir/build.make test/CMakeFiles/KernelPredicate_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 81%] Automatic MOC for target KernelPredicate_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/KernelPredicate_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 81%] Built target KernelPredicate_test_autogen
make  -f test/CMakeFiles/KernelPredicate_test.dir/build.make test/CMakeFiles/KernelPredicate_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/KernelPredicate_test.dir/DependInfo.cmake --color=
Scanning dependencies of target KernelPredicate_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/KernelPredicate_test.dir/build.make test/CMakeFiles/KernelPredicate_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 81%] Building CXX object test/CMakeFiles/KernelPredicate_test.dir/KernelPredicate_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/KernelPredicate_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/KernelPredicate_test.dir/KernelPredicate_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/KernelPredicate_test_autogen/mocs_compilation.cpp
[ 81%] Building CXX object test/CMakeFiles/KernelPredicate_test.dir/KernelPredicate_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/KernelPredicate_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/KernelPredicate_test.dir/KernelPredicate_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/KernelPredicate_test.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/KernelPredicate_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/predicate.h:19,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/KernelPredicate_test.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/KernelPredicate_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/predicate.h:19,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/KernelPredicate_test.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/KernelPredicate_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/predicate.h:19,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/KernelPredicate_test.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 81%] Linking CXX executable ../bin/TEST/KernelPredicate_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/KernelPredicate_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/KernelPredicate_test.dir/KernelPredicate_test_autogen/mocs_compilation.cpp.o CMakeFiles/KernelPredicate_test.dir/KernelPredicate_test.C.o -o ../bin/TEST/KernelPredicate_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 81%] Built target KernelPredicate_test
make  -f test/CMakeFiles/StdIteratorWrapper_test_autogen.dir/build.make test/CMakeFiles/StdIteratorWrapper_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/StdIteratorWrapper_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target StdIteratorWrapper_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/StdIteratorWrapper_test_autogen.dir/build.make test/CMakeFiles/StdIteratorWrapper_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 81%] Automatic MOC for target StdIteratorWrapper_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/StdIteratorWrapper_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 81%] Built target StdIteratorWrapper_test_autogen
make  -f test/CMakeFiles/StdIteratorWrapper_test.dir/build.make test/CMakeFiles/StdIteratorWrapper_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/StdIteratorWrapper_test.dir/DependInfo.cmake --color=
Scanning dependencies of target StdIteratorWrapper_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/StdIteratorWrapper_test.dir/build.make test/CMakeFiles/StdIteratorWrapper_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 81%] Building CXX object test/CMakeFiles/StdIteratorWrapper_test.dir/StdIteratorWrapper_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/StdIteratorWrapper_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/StdIteratorWrapper_test.dir/StdIteratorWrapper_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/StdIteratorWrapper_test_autogen/mocs_compilation.cpp
[ 81%] Building CXX object test/CMakeFiles/StdIteratorWrapper_test.dir/StdIteratorWrapper_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/StdIteratorWrapper_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/StdIteratorWrapper_test.dir/StdIteratorWrapper_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/StdIteratorWrapper_test.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/secondaryStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBdefs.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/StdIteratorWrapper_test.C:4:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/StdIteratorWrapper_test.C:4:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/secondaryStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBdefs.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/StdIteratorWrapper_test.C:4:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/StdIteratorWrapper_test.C:4:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/secondaryStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBdefs.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/StdIteratorWrapper_test.C:4:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/StdIteratorWrapper_test.C:4:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 81%] Linking CXX executable ../bin/TEST/StdIteratorWrapper_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/StdIteratorWrapper_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/StdIteratorWrapper_test.dir/StdIteratorWrapper_test_autogen/mocs_compilation.cpp.o CMakeFiles/StdIteratorWrapper_test.dir/StdIteratorWrapper_test.C.o -o ../bin/TEST/StdIteratorWrapper_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 81%] Built target StdIteratorWrapper_test
make  -f test/CMakeFiles/StandardPredicates_test2_autogen.dir/build.make test/CMakeFiles/StandardPredicates_test2_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/StandardPredicates_test2_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target StandardPredicates_test2_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/StandardPredicates_test2_autogen.dir/build.make test/CMakeFiles/StandardPredicates_test2_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 81%] Automatic MOC for target StandardPredicates_test2
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/StandardPredicates_test2_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 81%] Built target StandardPredicates_test2_autogen
make  -f test/CMakeFiles/StandardPredicates_test2.dir/build.make test/CMakeFiles/StandardPredicates_test2.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/StandardPredicates_test2.dir/DependInfo.cmake --color=
Scanning dependencies of target StandardPredicates_test2
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/StandardPredicates_test2.dir/build.make test/CMakeFiles/StandardPredicates_test2.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 81%] Building CXX object test/CMakeFiles/StandardPredicates_test2.dir/StandardPredicates_test2_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/StandardPredicates_test2_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/StandardPredicates_test2.dir/StandardPredicates_test2_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/StandardPredicates_test2_autogen/mocs_compilation.cpp
[ 81%] Building CXX object test/CMakeFiles/StandardPredicates_test2.dir/StandardPredicates_test2.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/StandardPredicates_test2_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/StandardPredicates_test2.dir/StandardPredicates_test2.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/StandardPredicates_test2.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/standardPredicates.h:19,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/StandardPredicates_test2.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/standardPredicates.h:19,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/StandardPredicates_test2.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/standardPredicates.h:19,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/StandardPredicates_test2.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/standardPredicates.h:19,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/StandardPredicates_test2.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/standardPredicates.h:19,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/StandardPredicates_test2.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/standardPredicates.h:19,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/StandardPredicates_test2.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 81%] Linking CXX executable ../bin/TEST/StandardPredicates_test2
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/StandardPredicates_test2.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/StandardPredicates_test2.dir/StandardPredicates_test2_autogen/mocs_compilation.cpp.o CMakeFiles/StandardPredicates_test2.dir/StandardPredicates_test2.C.o -o ../bin/TEST/StandardPredicates_test2  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 81%] Built target StandardPredicates_test2
make  -f test/CMakeFiles/StandardPredicates_test3_autogen.dir/build.make test/CMakeFiles/StandardPredicates_test3_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/StandardPredicates_test3_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target StandardPredicates_test3_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/StandardPredicates_test3_autogen.dir/build.make test/CMakeFiles/StandardPredicates_test3_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 81%] Automatic MOC for target StandardPredicates_test3
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/StandardPredicates_test3_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 81%] Built target StandardPredicates_test3_autogen
make  -f test/CMakeFiles/StandardPredicates_test3.dir/build.make test/CMakeFiles/StandardPredicates_test3.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/StandardPredicates_test3.dir/DependInfo.cmake --color=
Scanning dependencies of target StandardPredicates_test3
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/StandardPredicates_test3.dir/build.make test/CMakeFiles/StandardPredicates_test3.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 82%] Building CXX object test/CMakeFiles/StandardPredicates_test3.dir/StandardPredicates_test3_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/StandardPredicates_test3_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/StandardPredicates_test3.dir/StandardPredicates_test3_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/StandardPredicates_test3_autogen/mocs_compilation.cpp
[ 82%] Building CXX object test/CMakeFiles/StandardPredicates_test3.dir/StandardPredicates_test3.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/StandardPredicates_test3_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/StandardPredicates_test3.dir/StandardPredicates_test3.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/StandardPredicates_test3.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/standardPredicates.h:19,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/StandardPredicates_test3.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/standardPredicates.h:19,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/StandardPredicates_test3.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/standardPredicates.h:19,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/StandardPredicates_test3.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/standardPredicates.h:19,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/StandardPredicates_test3.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/standardPredicates.h:19,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/StandardPredicates_test3.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/standardPredicates.h:19,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/StandardPredicates_test3.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 82%] Linking CXX executable ../bin/TEST/StandardPredicates_test3
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/StandardPredicates_test3.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/StandardPredicates_test3.dir/StandardPredicates_test3_autogen/mocs_compilation.cpp.o CMakeFiles/StandardPredicates_test3.dir/StandardPredicates_test3.C.o -o ../bin/TEST/StandardPredicates_test3  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 82%] Built target StandardPredicates_test3
make  -f test/CMakeFiles/DefaultProcessors_test_autogen.dir/build.make test/CMakeFiles/DefaultProcessors_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/DefaultProcessors_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target DefaultProcessors_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/DefaultProcessors_test_autogen.dir/build.make test/CMakeFiles/DefaultProcessors_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 82%] Automatic MOC for target DefaultProcessors_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/DefaultProcessors_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 82%] Built target DefaultProcessors_test_autogen
make  -f test/CMakeFiles/DefaultProcessors_test.dir/build.make test/CMakeFiles/DefaultProcessors_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/DefaultProcessors_test.dir/DependInfo.cmake --color=
Scanning dependencies of target DefaultProcessors_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/DefaultProcessors_test.dir/build.make test/CMakeFiles/DefaultProcessors_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 82%] Building CXX object test/CMakeFiles/DefaultProcessors_test.dir/DefaultProcessors_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/DefaultProcessors_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/DefaultProcessors_test.dir/DefaultProcessors_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/DefaultProcessors_test_autogen/mocs_compilation.cpp
[ 82%] Building CXX object test/CMakeFiles/DefaultProcessors_test.dir/DefaultProcessors_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/DefaultProcessors_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/DefaultProcessors_test.dir/DefaultProcessors_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/DefaultProcessors_test.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/moleculeIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/DefaultProcessors_test.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/simpleBox3.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/HINFile.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/DefaultProcessors_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/moleculeIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/DefaultProcessors_test.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/simpleBox3.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/HINFile.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/DefaultProcessors_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/moleculeIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/DefaultProcessors_test.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/simpleBox3.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/HINFile.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/DefaultProcessors_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/DefaultProcessors_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/defaultProcessors.h: In member function 'BALL::AssignRadiusProcessor& BALL::AssignRadiusProcessor::operator=(BALL::AssignRadiusProcessor&&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/defaultProcessors.h:62:20: warning: implicitly-declared 'BALL::UnaryProcessor<BALL::Atom>& BALL::UnaryProcessor<BALL::Atom>::operator=(const BALL::UnaryProcessor<BALL::Atom>&)' is deprecated [-Wdeprecated-copy]
   62 |  class BALL_EXPORT AssignRadiusProcessor
      |                    ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashSet.h:33,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SYSTEM/file.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/classTest.h:5,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/DefaultProcessors_test.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/processor.h:75:3: note: because 'BALL::UnaryProcessor<BALL::Atom>' has user-provided 'BALL::UnaryProcessor<T>::UnaryProcessor(const BALL::UnaryProcessor<T>&) [with T = BALL::Atom]'
   75 |   UnaryProcessor
      |   ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/DefaultProcessors_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/defaultProcessors.h: In member function 'BALL::AssignChargeProcessor& BALL::AssignChargeProcessor::operator=(BALL::AssignChargeProcessor&&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/defaultProcessors.h:144:20: note: synthesized method 'BALL::AssignRadiusProcessor& BALL::AssignRadiusProcessor::operator=(BALL::AssignRadiusProcessor&&)' first required here
  144 |  class BALL_EXPORT AssignChargeProcessor
      |                    ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/DefaultProcessors_test.C: In function 'int main(int, char**)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/DefaultProcessors_test.C:150:74: note: synthesized method 'BALL::AssignChargeProcessor& BALL::AssignChargeProcessor::operator=(BALL::AssignChargeProcessor&&)' first required here
  150 |  acp = AssignChargeProcessor(BALL_TEST_DATA_PATH(DefaultProcessor_test.1));
      |                                                                          ^
[ 82%] Linking CXX executable ../bin/TEST/DefaultProcessors_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/DefaultProcessors_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/DefaultProcessors_test.dir/DefaultProcessors_test_autogen/mocs_compilation.cpp.o CMakeFiles/DefaultProcessors_test.dir/DefaultProcessors_test.C.o -o ../bin/TEST/DefaultProcessors_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 82%] Built target DefaultProcessors_test
make  -f test/CMakeFiles/ClearShiftProcessor_test_autogen.dir/build.make test/CMakeFiles/ClearShiftProcessor_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/ClearShiftProcessor_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target ClearShiftProcessor_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/ClearShiftProcessor_test_autogen.dir/build.make test/CMakeFiles/ClearShiftProcessor_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 82%] Automatic MOC for target ClearShiftProcessor_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/ClearShiftProcessor_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 82%] Built target ClearShiftProcessor_test_autogen
make  -f test/CMakeFiles/ClearShiftProcessor_test.dir/build.make test/CMakeFiles/ClearShiftProcessor_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/ClearShiftProcessor_test.dir/DependInfo.cmake --color=
Scanning dependencies of target ClearShiftProcessor_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/ClearShiftProcessor_test.dir/build.make test/CMakeFiles/ClearShiftProcessor_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 82%] Building CXX object test/CMakeFiles/ClearShiftProcessor_test.dir/ClearShiftProcessor_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/ClearShiftProcessor_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/ClearShiftProcessor_test.dir/ClearShiftProcessor_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/ClearShiftProcessor_test_autogen/mocs_compilation.cpp
[ 82%] Building CXX object test/CMakeFiles/ClearShiftProcessor_test.dir/ClearShiftProcessor_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/ClearShiftProcessor_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/ClearShiftProcessor_test.dir/ClearShiftProcessor_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ClearShiftProcessor_test.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/shiftModule.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/clearShiftProcessor.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ClearShiftProcessor_test.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/shiftModule.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/clearShiftProcessor.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ClearShiftProcessor_test.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/shiftModule.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/clearShiftProcessor.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ClearShiftProcessor_test.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/shiftModule.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/clearShiftProcessor.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ClearShiftProcessor_test.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/shiftModule.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/clearShiftProcessor.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ClearShiftProcessor_test.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/shiftModule.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/clearShiftProcessor.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ClearShiftProcessor_test.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 82%] Linking CXX executable ../bin/TEST/ClearShiftProcessor_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/ClearShiftProcessor_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/ClearShiftProcessor_test.dir/ClearShiftProcessor_test_autogen/mocs_compilation.cpp.o CMakeFiles/ClearShiftProcessor_test.dir/ClearShiftProcessor_test.C.o -o ../bin/TEST/ClearShiftProcessor_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 82%] Built target ClearShiftProcessor_test
make  -f test/CMakeFiles/AntechamberFile_test_autogen.dir/build.make test/CMakeFiles/AntechamberFile_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/AntechamberFile_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target AntechamberFile_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/AntechamberFile_test_autogen.dir/build.make test/CMakeFiles/AntechamberFile_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 82%] Automatic MOC for target AntechamberFile_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/AntechamberFile_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 82%] Built target AntechamberFile_test_autogen
make  -f test/CMakeFiles/AntechamberFile_test.dir/build.make test/CMakeFiles/AntechamberFile_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/AntechamberFile_test.dir/DependInfo.cmake --color=
Scanning dependencies of target AntechamberFile_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
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make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 82%] Building CXX object test/CMakeFiles/AntechamberFile_test.dir/AntechamberFile_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/AntechamberFile_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/AntechamberFile_test.dir/AntechamberFile_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/AntechamberFile_test_autogen/mocs_compilation.cpp
[ 82%] Building CXX object test/CMakeFiles/AntechamberFile_test.dir/AntechamberFile_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/AntechamberFile_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/AntechamberFile_test.dir/AntechamberFile_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AntechamberFile_test.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AntechamberFile_test.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AntechamberFile_test.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AntechamberFile_test.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AntechamberFile_test.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AntechamberFile_test.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AntechamberFile_test.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 84%] Linking CXX executable ../bin/TEST/AntechamberFile_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/AntechamberFile_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/AntechamberFile_test.dir/AntechamberFile_test_autogen/mocs_compilation.cpp.o CMakeFiles/AntechamberFile_test.dir/AntechamberFile_test.C.o -o ../bin/TEST/AntechamberFile_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 84%] Built target AntechamberFile_test
make  -f test/CMakeFiles/FragmentDB_test_autogen.dir/build.make test/CMakeFiles/FragmentDB_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/FragmentDB_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target FragmentDB_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/FragmentDB_test_autogen.dir/build.make test/CMakeFiles/FragmentDB_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 84%] Automatic MOC for target FragmentDB_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/FragmentDB_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 84%] Built target FragmentDB_test_autogen
make  -f test/CMakeFiles/FragmentDB_test.dir/build.make test/CMakeFiles/FragmentDB_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/FragmentDB_test.dir/DependInfo.cmake --color=
Scanning dependencies of target FragmentDB_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/FragmentDB_test.dir/build.make test/CMakeFiles/FragmentDB_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 84%] Building CXX object test/CMakeFiles/FragmentDB_test.dir/FragmentDB_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/FragmentDB_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/FragmentDB_test.dir/FragmentDB_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/FragmentDB_test_autogen/mocs_compilation.cpp
[ 84%] Building CXX object test/CMakeFiles/FragmentDB_test.dir/FragmentDB_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/FragmentDB_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/FragmentDB_test.dir/FragmentDB_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/FragmentDB_test.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/FragmentDB_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/FragmentDB_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/FragmentDB_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/FragmentDB_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/FragmentDB_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/FragmentDB_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/FragmentDB_test.C:15:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/FragmentDB_test.C: In function 'int main(int, char**)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:108:49: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  108 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/FragmentDB_test.C:90:2: note: in expansion of macro 'BALL_FOREACH_BOND'
   90 |  BALL_FOREACH_BOND(*res, atom_it, bond_it)
      |  ^~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/FragmentDB_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/FragmentDB_test.C:15:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:110:51: warning: implicitly-declared 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  110 |   for (bond_iterator = (*atom_iterator).beginBond(); \
      |                                                   ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/FragmentDB_test.C:90:2: note: in expansion of macro 'BALL_FOREACH_BOND'
   90 |  BALL_FOREACH_BOND(*res, atom_it, bond_it)
      |  ^~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/FragmentDB_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:47:15: note: because 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   47 |   BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:24:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   24 |  class ConstRandomAccessIterator
      |        ^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/FragmentDB_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/FragmentDB_test.C:15:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/FragmentDB_test.C: In function 'int main(int, char**)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:110:51: note: synthesized method 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' first required here
  110 |   for (bond_iterator = (*atom_iterator).beginBond(); \
      |                                                   ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/FragmentDB_test.C:90:2: note: in expansion of macro 'BALL_FOREACH_BOND'
   90 |  BALL_FOREACH_BOND(*res, atom_it, bond_it)
      |  ^~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:108:49: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  108 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/FragmentDB_test.C:124:2: note: in expansion of macro 'BALL_FOREACH_BOND'
  124 |  BALL_FOREACH_BOND(res, atom_it, bond_it)
      |  ^~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/FragmentDB_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/FragmentDB_test.C:15:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/FragmentDB_test.C: In function 'int main(int, char**)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:108:49: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' first required here
  108 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/FragmentDB_test.C:124:2: note: in expansion of macro 'BALL_FOREACH_BOND'
  124 |  BALL_FOREACH_BOND(res, atom_it, bond_it)
      |  ^~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:110:51: warning: implicitly-declared 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  110 |   for (bond_iterator = (*atom_iterator).beginBond(); \
      |                                                   ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/FragmentDB_test.C:124:2: note: in expansion of macro 'BALL_FOREACH_BOND'
  124 |  BALL_FOREACH_BOND(res, atom_it, bond_it)
      |  ^~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/FragmentDB_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:437:15: note: because 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::RandomAccessIterator<Container, DataType, Position, Traits>::RandomAccessIterator(const BALL::RandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
  437 |   BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:413:8: warning: implicitly-declared 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  413 |  class RandomAccessIterator
      |        ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:47:15: note: because 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   47 |   BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/FragmentDB_test.C:15:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/FragmentDB_test.C: In function 'int main(int, char**)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:110:51: note: synthesized method 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' first required here
  110 |   for (bond_iterator = (*atom_iterator).beginBond(); \
      |                                                   ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/FragmentDB_test.C:124:2: note: in expansion of macro 'BALL_FOREACH_BOND'
  124 |  BALL_FOREACH_BOND(res, atom_it, bond_it)
      |  ^~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:108:49: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  108 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/FragmentDB_test.C:158:3: note: in expansion of macro 'BALL_FOREACH_BOND'
  158 |   BALL_FOREACH_BOND(*res_it, atom_it, bond_it)
      |   ^~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/FragmentDB_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/FragmentDB_test.C:15:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:110:51: warning: implicitly-declared 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  110 |   for (bond_iterator = (*atom_iterator).beginBond(); \
      |                                                   ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/FragmentDB_test.C:158:3: note: in expansion of macro 'BALL_FOREACH_BOND'
  158 |   BALL_FOREACH_BOND(*res_it, atom_it, bond_it)
      |   ^~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/FragmentDB_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:437:15: note: because 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::RandomAccessIterator<Container, DataType, Position, Traits>::RandomAccessIterator(const BALL::RandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
  437 |   BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/FragmentDB_test.C:166:24: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  166 |  atom_it = S.beginAtom();
      |                        ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/FragmentDB_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/FragmentDB_test.C:177:31: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  177 |  for (res_it = S.beginResidue(); +res_it; ++res_it)
      |                               ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/FragmentDB_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Residue; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::ResidueIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Residue; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::ResidueIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/FragmentDB_test.C: In function 'int main(int, char**)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/FragmentDB_test.C:177:31: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>&)' first required here
  177 |  for (res_it = S.beginResidue(); +res_it; ++res_it)
      |                               ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/FragmentDB_test.C:15:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:108:49: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  108 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/FragmentDB_test.C:180:3: note: in expansion of macro 'BALL_FOREACH_BOND'
  180 |   BALL_FOREACH_BOND(*res_it, atom_it, bond_it)
      |   ^~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/FragmentDB_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/FragmentDB_test.C:15:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:110:51: warning: implicitly-declared 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  110 |   for (bond_iterator = (*atom_iterator).beginBond(); \
      |                                                   ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/FragmentDB_test.C:180:3: note: in expansion of macro 'BALL_FOREACH_BOND'
  180 |   BALL_FOREACH_BOND(*res_it, atom_it, bond_it)
      |   ^~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/FragmentDB_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:437:15: note: because 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::RandomAccessIterator<Container, DataType, Position, Traits>::RandomAccessIterator(const BALL::RandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
  437 |   BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~
[ 84%] Linking CXX executable ../bin/TEST/FragmentDB_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/FragmentDB_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/FragmentDB_test.dir/FragmentDB_test_autogen/mocs_compilation.cpp.o CMakeFiles/FragmentDB_test.dir/FragmentDB_test.C.o -o ../bin/TEST/FragmentDB_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 84%] Built target FragmentDB_test
make  -f test/CMakeFiles/SimpleBox3_test_autogen.dir/build.make test/CMakeFiles/SimpleBox3_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/SimpleBox3_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target SimpleBox3_test_autogen
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make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 84%] Automatic MOC for target SimpleBox3_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/SimpleBox3_test_autogen.dir/AutogenInfo.json Release
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make  -f test/CMakeFiles/SimpleBox3_test.dir/build.make test/CMakeFiles/SimpleBox3_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/SimpleBox3_test.dir/DependInfo.cmake --color=
Scanning dependencies of target SimpleBox3_test
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cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/SimpleBox3_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/SimpleBox3_test.dir/SimpleBox3_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/SimpleBox3_test_autogen/mocs_compilation.cpp
[ 84%] Building CXX object test/CMakeFiles/SimpleBox3_test.dir/SimpleBox3_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/SimpleBox3_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/SimpleBox3_test.dir/SimpleBox3_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/SimpleBox3_test.C
[ 84%] Linking CXX executable ../bin/TEST/SimpleBox3_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/SimpleBox3_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/SimpleBox3_test.dir/SimpleBox3_test_autogen/mocs_compilation.cpp.o CMakeFiles/SimpleBox3_test.dir/SimpleBox3_test.C.o -o ../bin/TEST/SimpleBox3_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
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cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/NormalizeNamesProcessor_test_autogen.dir/DependInfo.cmake --color=
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cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/NormalizeNamesProcessor_test_autogen.dir/AutogenInfo.json Release
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make  -f test/CMakeFiles/NormalizeNamesProcessor_test.dir/build.make test/CMakeFiles/NormalizeNamesProcessor_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/NormalizeNamesProcessor_test.dir/DependInfo.cmake --color=
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[ 84%] Building CXX object test/CMakeFiles/NormalizeNamesProcessor_test.dir/NormalizeNamesProcessor_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/NormalizeNamesProcessor_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/NormalizeNamesProcessor_test.dir/NormalizeNamesProcessor_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/NormalizeNamesProcessor_test_autogen/mocs_compilation.cpp
[ 84%] Building CXX object test/CMakeFiles/NormalizeNamesProcessor_test.dir/NormalizeNamesProcessor_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/NormalizeNamesProcessor_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/NormalizeNamesProcessor_test.dir/NormalizeNamesProcessor_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/NormalizeNamesProcessor_test.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/NormalizeNamesProcessor_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/NormalizeNamesProcessor_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/NormalizeNamesProcessor_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/NormalizeNamesProcessor_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/NormalizeNamesProcessor_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/NormalizeNamesProcessor_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 84%] Linking CXX executable ../bin/TEST/NormalizeNamesProcessor_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/NormalizeNamesProcessor_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/NormalizeNamesProcessor_test.dir/NormalizeNamesProcessor_test_autogen/mocs_compilation.cpp.o CMakeFiles/NormalizeNamesProcessor_test.dir/NormalizeNamesProcessor_test.C.o -o ../bin/TEST/NormalizeNamesProcessor_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 84%] Built target NormalizeNamesProcessor_test
make  -f test/CMakeFiles/Matrix44_test1_autogen.dir/build.make test/CMakeFiles/Matrix44_test1_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/Matrix44_test1_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target Matrix44_test1_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/Matrix44_test1_autogen.dir/build.make test/CMakeFiles/Matrix44_test1_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 84%] Automatic MOC for target Matrix44_test1
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/Matrix44_test1_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 84%] Built target Matrix44_test1_autogen
make  -f test/CMakeFiles/Matrix44_test1.dir/build.make test/CMakeFiles/Matrix44_test1.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/Matrix44_test1.dir/DependInfo.cmake --color=
Scanning dependencies of target Matrix44_test1
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/Matrix44_test1.dir/build.make test/CMakeFiles/Matrix44_test1.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 84%] Building CXX object test/CMakeFiles/Matrix44_test1.dir/Matrix44_test1_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/Matrix44_test1_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Matrix44_test1.dir/Matrix44_test1_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/Matrix44_test1_autogen/mocs_compilation.cpp
[ 84%] Building CXX object test/CMakeFiles/Matrix44_test1.dir/Matrix44_test1.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/Matrix44_test1_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Matrix44_test1.dir/Matrix44_test1.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Matrix44_test1.C
[ 84%] Linking CXX executable ../bin/TEST/Matrix44_test1
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/Matrix44_test1.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Matrix44_test1.dir/Matrix44_test1_autogen/mocs_compilation.cpp.o CMakeFiles/Matrix44_test1.dir/Matrix44_test1.C.o -o ../bin/TEST/Matrix44_test1  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 84%] Built target Matrix44_test1
make  -f test/CMakeFiles/ForEach_test_autogen.dir/build.make test/CMakeFiles/ForEach_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/ForEach_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target ForEach_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/ForEach_test_autogen.dir/build.make test/CMakeFiles/ForEach_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 84%] Automatic MOC for target ForEach_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/ForEach_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 84%] Built target ForEach_test_autogen
make  -f test/CMakeFiles/ForEach_test.dir/build.make test/CMakeFiles/ForEach_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/ForEach_test.dir/DependInfo.cmake --color=
Scanning dependencies of target ForEach_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/ForEach_test.dir/build.make test/CMakeFiles/ForEach_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 85%] Building CXX object test/CMakeFiles/ForEach_test.dir/ForEach_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/ForEach_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/ForEach_test.dir/ForEach_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/ForEach_test_autogen/mocs_compilation.cpp
[ 85%] Building CXX object test/CMakeFiles/ForEach_test.dir/ForEach_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/ForEach_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/ForEach_test.dir/ForEach_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ForEach_test.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/molecule.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ForEach_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/molecule.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ForEach_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/molecule.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ForEach_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/molecule.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ForEach_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/molecule.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ForEach_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/molecule.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ForEach_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ForEach_test.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ForEach_test.C: In function 'int main(int, char**)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:28:61: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Molecule, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::MoleculeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Molecule, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::MoleculeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Molecule, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::MoleculeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   28 | for (molecule_iterator = (molecule_container).beginMolecule(); \
      |                                                             ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ForEach_test.C:103:2: note: in expansion of macro 'BALL_FOREACH_MOLECULE'
  103 |  BALL_FOREACH_MOLECULE(s1, mi) test += mi->getName();
      |  ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/molecule.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ForEach_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Molecule, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::MoleculeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Molecule; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::MoleculeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Molecule, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::MoleculeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Molecule, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::MoleculeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Molecule, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::MoleculeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Molecule, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::MoleculeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Molecule, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::MoleculeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Molecule, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::MoleculeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Molecule, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::MoleculeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Molecule; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::MoleculeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ForEach_test.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ForEach_test.C: In function 'int main(int, char**)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:28:61: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Molecule, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::MoleculeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Molecule, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::MoleculeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Molecule, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::MoleculeIteratorTraits>&)' first required here
   28 | for (molecule_iterator = (molecule_container).beginMolecule(); \
      |                                                             ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ForEach_test.C:103:2: note: in expansion of macro 'BALL_FOREACH_MOLECULE'
  103 |  BALL_FOREACH_MOLECULE(s1, mi) test += mi->getName();
      |  ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:40:61: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Fragment, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::FragmentIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Fragment, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::FragmentIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Fragment, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::FragmentIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   40 | for (fragment_iterator = (fragment_container).beginFragment(); \
      |                                                             ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ForEach_test.C:111:2: note: in expansion of macro 'BALL_FOREACH_FRAGMENT'
  111 |  BALL_FOREACH_FRAGMENT(s1, fi) test += fi->getName();
      |  ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/molecule.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ForEach_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Fragment, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::FragmentIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Fragment; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::FragmentIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Fragment, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::FragmentIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Fragment, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::FragmentIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Fragment, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::FragmentIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Fragment, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::FragmentIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Fragment, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::FragmentIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Fragment, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::FragmentIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Fragment, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::FragmentIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Fragment; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::FragmentIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ForEach_test.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ForEach_test.C: In function 'int main(int, char**)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:40:61: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Fragment, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::FragmentIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Fragment, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::FragmentIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Fragment, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::FragmentIteratorTraits>&)' first required here
   40 | for (fragment_iterator = (fragment_container).beginFragment(); \
      |                                                             ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ForEach_test.C:111:2: note: in expansion of macro 'BALL_FOREACH_FRAGMENT'
  111 |  BALL_FOREACH_FRAGMENT(s1, fi) test += fi->getName();
      |  ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:52:69: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::AtomContainer, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomContainerIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::AtomContainer, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomContainerIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::AtomContainer, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomContainerIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   52 | for (atom_container_iterator = (atom_containers).beginAtomContainer(); \
      |                                                                     ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ForEach_test.C:119:2: note: in expansion of macro 'BALL_FOREACH_ATOMCONTAINER'
  119 |  BALL_FOREACH_ATOMCONTAINER(s1, aci) test += aci->getName();
      |  ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/molecule.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ForEach_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::AtomContainer, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomContainerIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::AtomContainer; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomContainerIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::AtomContainer, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomContainerIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::AtomContainer, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomContainerIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::AtomContainer, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomContainerIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::AtomContainer, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomContainerIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::AtomContainer, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomContainerIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::AtomContainer, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomContainerIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::AtomContainer, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomContainerIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::AtomContainer; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomContainerIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ForEach_test.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ForEach_test.C: In function 'int main(int, char**)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:52:69: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::AtomContainer, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomContainerIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::AtomContainer, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomContainerIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::AtomContainer, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomContainerIteratorTraits>&)' first required here
   52 | for (atom_container_iterator = (atom_containers).beginAtomContainer(); \
      |                                                                     ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ForEach_test.C:119:2: note: in expansion of macro 'BALL_FOREACH_ATOMCONTAINER'
  119 |  BALL_FOREACH_ATOMCONTAINER(s1, aci) test += aci->getName();
      |  ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:64:49: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   64 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ForEach_test.C:126:2: note: in expansion of macro 'BALL_FOREACH_ATOM'
  126 |  BALL_FOREACH_ATOM(s1, ai1) test += ai1->getName();
      |  ^~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/molecule.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ForEach_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ForEach_test.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ForEach_test.C: In function 'int main(int, char**)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:64:49: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' first required here
   64 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ForEach_test.C:126:2: note: in expansion of macro 'BALL_FOREACH_ATOM'
  126 |  BALL_FOREACH_ATOM(s1, ai1) test += ai1->getName();
      |  ^~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:77:49: warning: implicitly-declared 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   77 | for (bond_iterator = (bond_container).beginBond(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ForEach_test.C:132:2: note: in expansion of macro 'BALL_FOREACH_ATOM_BOND'
  132 |  BALL_FOREACH_ATOM_BOND(a1, bi) test += bi->getName();
      |  ^~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/molecule.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ForEach_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:437:15: note: because 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::RandomAccessIterator<Container, DataType, Position, Traits>::RandomAccessIterator(const BALL::RandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
  437 |   BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:413:8: warning: implicitly-declared 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  413 |  class RandomAccessIterator
      |        ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:47:15: note: because 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   47 |   BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:24:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   24 |  class ConstRandomAccessIterator
      |        ^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/molecule.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ForEach_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/molecule.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ForEach_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:413:8: note: synthesized method 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' first required here
  413 |  class RandomAccessIterator
      |        ^~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ForEach_test.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ForEach_test.C: In function 'int main(int, char**)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:77:49: note: synthesized method 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' first required here
   77 | for (bond_iterator = (bond_container).beginBond(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ForEach_test.C:132:2: note: in expansion of macro 'BALL_FOREACH_ATOM_BOND'
  132 |  BALL_FOREACH_ATOM_BOND(a1, bi) test += bi->getName();
      |  ^~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:90:55: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   90 | for (first_atom_iterator = (atom_container).beginAtom(); \
      |                                                       ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ForEach_test.C:139:2: note: in expansion of macro 'BALL_FOREACH_ATOM_PAIR'
  139 |  BALL_FOREACH_ATOM_PAIR(s1, ai1, ai2) { test += ai1->getName(); test += ai2->getName(); }
      |  ^~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/molecule.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ForEach_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ForEach_test.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:92:58: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   92 |   for (second_atom_iterator = (atom_container).beginAtom(); \
      |                                                          ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ForEach_test.C:139:2: note: in expansion of macro 'BALL_FOREACH_ATOM_PAIR'
  139 |  BALL_FOREACH_ATOM_PAIR(s1, ai1, ai2) { test += ai1->getName(); test += ai2->getName(); }
      |  ^~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/molecule.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ForEach_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ForEach_test.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:108:49: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  108 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ForEach_test.C:146:2: note: in expansion of macro 'BALL_FOREACH_BOND'
  146 |  BALL_FOREACH_BOND(s1, ai1, bi)
      |  ^~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/molecule.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ForEach_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ForEach_test.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:110:51: warning: implicitly-declared 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  110 |   for (bond_iterator = (*atom_iterator).beginBond(); \
      |                                                   ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ForEach_test.C:146:2: note: in expansion of macro 'BALL_FOREACH_BOND'
  146 |  BALL_FOREACH_BOND(s1, ai1, bi)
      |  ^~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/molecule.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ForEach_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:437:15: note: because 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::RandomAccessIterator<Container, DataType, Position, Traits>::RandomAccessIterator(const BALL::RandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
  437 |   BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ForEach_test.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:124:49: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  124 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ForEach_test.C:157:2: note: in expansion of macro 'BALL_FOREACH_INTERBOND'
  157 |  BALL_FOREACH_INTERBOND(s1, ai1, bi) { test += ai1->getName(); test += bi->getName(); }
      |  ^~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/molecule.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ForEach_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ForEach_test.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:126:51: warning: implicitly-declared 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  126 |   for (bond_iterator = (*atom_iterator).beginBond(); \
      |                                                   ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ForEach_test.C:157:2: note: in expansion of macro 'BALL_FOREACH_INTERBOND'
  157 |  BALL_FOREACH_INTERBOND(s1, ai1, bi) { test += ai1->getName(); test += bi->getName(); }
      |  ^~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/molecule.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ForEach_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:437:15: note: because 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::RandomAccessIterator<Container, DataType, Position, Traits>::RandomAccessIterator(const BALL::RandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
  437 |   BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ForEach_test.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:141:49: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  141 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ForEach_test.C:164:2: note: in expansion of macro 'BALL_FOREACH_INTRABOND'
  164 |  BALL_FOREACH_INTRABOND(s1, ai1, bi) { test += ai1->getName(); test += bi->getName(); }
      |  ^~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/molecule.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ForEach_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ForEach_test.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:143:51: warning: implicitly-declared 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  143 |   for (bond_iterator = (*atom_iterator).beginBond(); \
      |                                                   ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ForEach_test.C:164:2: note: in expansion of macro 'BALL_FOREACH_INTRABOND'
  164 |  BALL_FOREACH_INTRABOND(s1, ai1, bi) { test += ai1->getName(); test += bi->getName(); }
      |  ^~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/molecule.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ForEach_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:437:15: note: because 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::RandomAccessIterator<Container, DataType, Position, Traits>::RandomAccessIterator(const BALL::RandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
  437 |   BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ForEach_test.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:156:58: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Protein, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ProteinIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Protein, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ProteinIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Protein, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ProteinIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  156 | for (protein_iterator = (protein_container).beginProtein(); \
      |                                                          ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ForEach_test.C:172:2: note: in expansion of macro 'BALL_FOREACH_PROTEIN'
  172 |  BALL_FOREACH_PROTEIN(s1, pi) test += pi->getName();
      |  ^~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/molecule.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ForEach_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Protein, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ProteinIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Protein; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::ProteinIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Protein, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ProteinIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Protein, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ProteinIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Protein, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ProteinIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Protein, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ProteinIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Protein, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ProteinIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Protein, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ProteinIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Protein, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ProteinIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Protein; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::ProteinIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ForEach_test.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ForEach_test.C: In function 'int main(int, char**)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:156:58: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Protein, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ProteinIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Protein, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ProteinIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Protein, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ProteinIteratorTraits>&)' first required here
  156 | for (protein_iterator = (protein_container).beginProtein(); \
      |                                                          ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ForEach_test.C:172:2: note: in expansion of macro 'BALL_FOREACH_PROTEIN'
  172 |  BALL_FOREACH_PROTEIN(s1, pi) test += pi->getName();
      |  ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:166:52: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Chain, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ChainIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Chain, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ChainIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Chain, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ChainIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  166 | for (chain_iterator = (chain_container).beginChain(); \
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ForEach_test.C:180:2: note: in expansion of macro 'BALL_FOREACH_CHAIN'
  180 |  BALL_FOREACH_CHAIN(s1, ci) test += ci->getName();
      |  ^~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/molecule.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ForEach_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Chain, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ChainIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Chain; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::ChainIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Chain, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ChainIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Chain, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ChainIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Chain, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ChainIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Chain, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ChainIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Chain, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ChainIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Chain, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ChainIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Chain, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ChainIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Chain; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::ChainIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ForEach_test.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ForEach_test.C: In function 'int main(int, char**)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:166:52: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Chain, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ChainIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Chain, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ChainIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Chain, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ChainIteratorTraits>&)' first required here
  166 | for (chain_iterator = (chain_container).beginChain(); \
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ForEach_test.C:180:2: note: in expansion of macro 'BALL_FOREACH_CHAIN'
  180 |  BALL_FOREACH_CHAIN(s1, ci) test += ci->getName();
      |  ^~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:177:93: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::SecondaryStructure, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::SecondaryStructureIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::SecondaryStructure, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::SecondaryStructureIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::SecondaryStructure, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::SecondaryStructureIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  177 | for (secondary_structure_iterator = (secondary_structure_container).beginSecondaryStructure(); \
      |                                                                                             ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ForEach_test.C:188:2: note: in expansion of macro 'BALL_FOREACH_SECONDARYSTRUCTURE'
  188 |  BALL_FOREACH_SECONDARYSTRUCTURE(s1, ssi) test += ssi->getName();
      |  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/molecule.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ForEach_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::SecondaryStructure, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::SecondaryStructureIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::SecondaryStructure; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::SecondaryStructureIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::SecondaryStructure, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::SecondaryStructureIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::SecondaryStructure, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::SecondaryStructureIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::SecondaryStructure, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::SecondaryStructureIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::SecondaryStructure, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::SecondaryStructureIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::SecondaryStructure, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::SecondaryStructureIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::SecondaryStructure, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::SecondaryStructureIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::SecondaryStructure, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::SecondaryStructureIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::SecondaryStructure; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::SecondaryStructureIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ForEach_test.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ForEach_test.C: In function 'int main(int, char**)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:177:93: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::SecondaryStructure, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::SecondaryStructureIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::SecondaryStructure, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::SecondaryStructureIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::SecondaryStructure, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::SecondaryStructureIteratorTraits>&)' first required here
  177 | for (secondary_structure_iterator = (secondary_structure_container).beginSecondaryStructure(); \
      |                                                                                             ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ForEach_test.C:188:2: note: in expansion of macro 'BALL_FOREACH_SECONDARYSTRUCTURE'
  188 |  BALL_FOREACH_SECONDARYSTRUCTURE(s1, ssi) test += ssi->getName();
      |  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:187:58: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  187 | for (residue_iterator = (residue_container).beginResidue(); \
      |                                                          ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ForEach_test.C:196:2: note: in expansion of macro 'BALL_FOREACH_RESIDUE'
  196 |  BALL_FOREACH_RESIDUE(s1, ri) test += ri->getName();
      |  ^~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/molecule.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ForEach_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Residue; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::ResidueIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Residue; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::ResidueIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ForEach_test.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ForEach_test.C: In function 'int main(int, char**)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:187:58: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>&)' first required here
  187 | for (residue_iterator = (residue_container).beginResidue(); \
      |                                                          ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ForEach_test.C:196:2: note: in expansion of macro 'BALL_FOREACH_RESIDUE'
  196 |  BALL_FOREACH_RESIDUE(s1, ri) test += ri->getName();
      |  ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:198:60: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::PDBAtom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::PDBAtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::PDBAtom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::PDBAtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::PDBAtom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::PDBAtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  198 | for (pdb_atom_iterator = (pdb_atom_container).beginPDBAtom(); \
      |                                                            ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ForEach_test.C:204:2: note: in expansion of macro 'BALL_FOREACH_PDBATOM'
  204 |  BALL_FOREACH_PDBATOM(p1, pai) test += pai->getName();
      |  ^~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/molecule.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ForEach_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::PDBAtom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::PDBAtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::PDBAtom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::PDBAtomIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::PDBAtom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::PDBAtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::PDBAtom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::PDBAtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::PDBAtom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::PDBAtomIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::PDBAtom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::PDBAtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::PDBAtom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::PDBAtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::PDBAtom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::PDBAtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::PDBAtom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::PDBAtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::PDBAtom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::PDBAtomIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ForEach_test.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ForEach_test.C: In function 'int main(int, char**)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:198:60: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::PDBAtom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::PDBAtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::PDBAtom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::PDBAtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::PDBAtom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::PDBAtomIteratorTraits>&)' first required here
  198 | for (pdb_atom_iterator = (pdb_atom_container).beginPDBAtom(); \
      |                                                            ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ForEach_test.C:204:2: note: in expansion of macro 'BALL_FOREACH_PDBATOM'
  204 |  BALL_FOREACH_PDBATOM(p1, pai) test += pai->getName();
      |  ^~~~~~~~~~~~~~~~~~~~
[ 85%] Linking CXX executable ../bin/TEST/ForEach_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/ForEach_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/ForEach_test.dir/ForEach_test_autogen/mocs_compilation.cpp.o CMakeFiles/ForEach_test.dir/ForEach_test.C.o -o ../bin/TEST/ForEach_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 85%] Built target ForEach_test
make  -f test/CMakeFiles/GlobalKernel_test_autogen.dir/build.make test/CMakeFiles/GlobalKernel_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/GlobalKernel_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target GlobalKernel_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/GlobalKernel_test_autogen.dir/build.make test/CMakeFiles/GlobalKernel_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 85%] Automatic MOC for target GlobalKernel_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/GlobalKernel_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 85%] Built target GlobalKernel_test_autogen
make  -f test/CMakeFiles/GlobalKernel_test.dir/build.make test/CMakeFiles/GlobalKernel_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/GlobalKernel_test.dir/DependInfo.cmake --color=
Scanning dependencies of target GlobalKernel_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/GlobalKernel_test.dir/build.make test/CMakeFiles/GlobalKernel_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 85%] Building CXX object test/CMakeFiles/GlobalKernel_test.dir/GlobalKernel_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/GlobalKernel_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/GlobalKernel_test.dir/GlobalKernel_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/GlobalKernel_test_autogen/mocs_compilation.cpp
[ 85%] Building CXX object test/CMakeFiles/GlobalKernel_test.dir/GlobalKernel_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/GlobalKernel_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/GlobalKernel_test.dir/GlobalKernel_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/GlobalKernel_test.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/global.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/GlobalKernel_test.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/global.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/GlobalKernel_test.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/global.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/GlobalKernel_test.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/global.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/GlobalKernel_test.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/global.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/GlobalKernel_test.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/global.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/GlobalKernel_test.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/GlobalKernel_test.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/global.h: In instantiation of 'void BALL::cloneBonds(const AtomContainerType&, AtomContainerType&) [with AtomContainerType = BALL::Chain]':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/GlobalKernel_test.C:52:19:   required from here
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/global.h:79:19: warning: implicitly-declared 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   79 |    for (bond_iter = atom_iter_a->beginBond(); bond_iter != atom_iter_a->endBond(); ++bond_iter)
      |         ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/global.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/GlobalKernel_test.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:47:15: note: because 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   47 |   BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:24:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   24 |  class ConstRandomAccessIterator
      |        ^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/global.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/GlobalKernel_test.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/GlobalKernel_test.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/global.h:79:19: note: synthesized method 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' first required here
   79 |    for (bond_iter = atom_iter_a->beginBond(); bond_iter != atom_iter_a->endBond(); ++bond_iter)
      |         ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
[ 85%] Linking CXX executable ../bin/TEST/GlobalKernel_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/GlobalKernel_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/GlobalKernel_test.dir/GlobalKernel_test_autogen/mocs_compilation.cpp.o CMakeFiles/GlobalKernel_test.dir/GlobalKernel_test.C.o -o ../bin/TEST/GlobalKernel_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 85%] Built target GlobalKernel_test
make  -f test/CMakeFiles/AtomIterator_test_autogen.dir/build.make test/CMakeFiles/AtomIterator_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/AtomIterator_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target AtomIterator_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/AtomIterator_test_autogen.dir/build.make test/CMakeFiles/AtomIterator_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 85%] Automatic MOC for target AtomIterator_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/AtomIterator_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 85%] Built target AtomIterator_test_autogen
make  -f test/CMakeFiles/AtomIterator_test.dir/build.make test/CMakeFiles/AtomIterator_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/AtomIterator_test.dir/DependInfo.cmake --color=
Scanning dependencies of target AtomIterator_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/AtomIterator_test.dir/build.make test/CMakeFiles/AtomIterator_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 85%] Building CXX object test/CMakeFiles/AtomIterator_test.dir/AtomIterator_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/AtomIterator_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/AtomIterator_test.dir/AtomIterator_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/AtomIterator_test_autogen/mocs_compilation.cpp
[ 85%] Building CXX object test/CMakeFiles/AtomIterator_test.dir/AtomIterator_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/AtomIterator_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/AtomIterator_test.dir/AtomIterator_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AtomIterator_test.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AtomIterator_test.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AtomIterator_test.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AtomIterator_test.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AtomIterator_test.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AtomIterator_test.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AtomIterator_test.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 85%] Linking CXX executable ../bin/TEST/AtomIterator_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/AtomIterator_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/AtomIterator_test.dir/AtomIterator_test_autogen/mocs_compilation.cpp.o CMakeFiles/AtomIterator_test.dir/AtomIterator_test.C.o -o ../bin/TEST/AtomIterator_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 85%] Built target AtomIterator_test
make  -f test/CMakeFiles/Spectrum_test_autogen.dir/build.make test/CMakeFiles/Spectrum_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/Spectrum_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target Spectrum_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/Spectrum_test_autogen.dir/build.make test/CMakeFiles/Spectrum_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 85%] Automatic MOC for target Spectrum_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/Spectrum_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 85%] Built target Spectrum_test_autogen
make  -f test/CMakeFiles/Spectrum_test.dir/build.make test/CMakeFiles/Spectrum_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/Spectrum_test.dir/DependInfo.cmake --color=
Scanning dependencies of target Spectrum_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/Spectrum_test.dir/build.make test/CMakeFiles/Spectrum_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 85%] Building CXX object test/CMakeFiles/Spectrum_test.dir/Spectrum_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/Spectrum_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Spectrum_test.dir/Spectrum_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/Spectrum_test_autogen/mocs_compilation.cpp
[ 85%] Building CXX object test/CMakeFiles/Spectrum_test.dir/Spectrum_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/Spectrum_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Spectrum_test.dir/Spectrum_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Spectrum_test.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/secondaryStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBdefs.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Spectrum_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/simpleBox3.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/HINFile.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Spectrum_test.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/secondaryStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBdefs.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Spectrum_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/simpleBox3.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/HINFile.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Spectrum_test.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/secondaryStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBdefs.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Spectrum_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/simpleBox3.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/HINFile.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Spectrum_test.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/spectrum.h:335,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Spectrum_test.C:12:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/spectrum.iC: In constructor 'BALL::Spectrum<DataT, PeakT, PositionT>::Spectrum(const std::vector<PeakT>&, const PositionType&, const PositionType&, const PositionType&) [with DataT = BALL::TRegularData1D<float>; PeakT = BALL::Peak<float>; PositionT = float; BALL::Spectrum<DataT, PeakT, PositionT>::PositionType = float]':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/spectrum.iC:20:31: warning: catching polymorphic type 'class BALL::Exception::OutOfGrid' by value [-Wcatch-value=]
   20 |   catch (Exception::OutOfGrid e)
      |                               ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/spectrum.h:335,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Spectrum_test.C:12:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/spectrum.iC: In constructor 'BALL::Spectrum<DataT, PeakT, PositionT>::Spectrum(const std::vector<PeakT>&, const PositionType&, const PositionType&, const PositionType&) [with DataT = BALL::TRegularData2D<float>; PeakT = BALL::Peak<BALL::TVector2<float> >; PositionT = BALL::TVector2<float>; BALL::Spectrum<DataT, PeakT, PositionT>::PositionType = BALL::TVector2<float>]':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/spectrum.iC:46:31: warning: catching polymorphic type 'class BALL::Exception::OutOfGrid' by value [-Wcatch-value=]
   46 |   catch (Exception::OutOfGrid e)
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/spectrum.iC: In member function 'double BALL::Spectrum<DataT, PeakT, PositionT>::difference(const BALL::Spectrum<DataT, PeakT, PositionT>&) const [with DataT = BALL::TRegularData1D<float>; PeakT = BALL::Peak<float>; PositionT = float]':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/spectrum.iC:135:32: warning: catching polymorphic type 'class BALL::Exception::OutOfGrid' by value [-Wcatch-value=]
  135 |    catch (Exception::OutOfGrid e)
      |                                ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/spectrum.iC: In member function 'double BALL::Spectrum<DataT, PeakT, PositionT>::difference(const BALL::Spectrum<DataT, PeakT, PositionT>&) const [with DataT = BALL::TRegularData2D<float>; PeakT = BALL::Peak<BALL::TVector2<float> >; PositionT = BALL::TVector2<float>]':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/spectrum.iC:177:32: warning: catching polymorphic type 'class BALL::Exception::OutOfGrid' by value [-Wcatch-value=]
  177 |    catch (Exception::OutOfGrid e)
      |                                ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/spectrum.iC: In member function 'double BALL::Spectrum<DataT, PeakT, PositionT>::getFourierDifference(const BALL::Spectrum<DataT, PeakT, PositionT>&, float, float) [with DataT = BALL::TRegularData1D<float>; PeakT = BALL::Peak<float>; PositionT = float]':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/spectrum.iC:752:101: warning: unused parameter 'other_spectrum' [-Wunused-parameter]
  752 | double Spectrum<RegularData1D, Peak1D>::getFourierDifference(const Spectrum<RegularData1D, Peak1D>& other_spectrum, float min_freq, float max_freq)
      |                                                              ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/spectrum.iC:752:123: warning: unused parameter 'min_freq' [-Wunused-parameter]
  752 | double Spectrum<RegularData1D, Peak1D>::getFourierDifference(const Spectrum<RegularData1D, Peak1D>& other_spectrum, float min_freq, float max_freq)
      |                                                                                                                     ~~~~~~^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/spectrum.iC:752:139: warning: unused parameter 'max_freq' [-Wunused-parameter]
  752 | double Spectrum<RegularData1D, Peak1D>::getFourierDifference(const Spectrum<RegularData1D, Peak1D>& other_spectrum, float min_freq, float max_freq)
      |                                                                                                                                     ~~~~~~^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/spectrum.iC: In member function 'double BALL::Spectrum<DataT, PeakT, PositionT>::getFourierDifference(const BALL::Spectrum<DataT, PeakT, PositionT>&, float, float) [with DataT = BALL::TRegularData2D<float>; PeakT = BALL::Peak<BALL::TVector2<float> >; PositionT = BALL::TVector2<float>]':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/spectrum.iC:827:101: warning: unused parameter 'other_spectrum' [-Wunused-parameter]
  827 | double Spectrum<RegularData2D, Peak2D>::getFourierDifference(const Spectrum<RegularData2D, Peak2D>& other_spectrum, float min_freq, float max_freq)
      |                                                              ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/spectrum.iC:827:123: warning: unused parameter 'min_freq' [-Wunused-parameter]
  827 | double Spectrum<RegularData2D, Peak2D>::getFourierDifference(const Spectrum<RegularData2D, Peak2D>& other_spectrum, float min_freq, float max_freq)
      |                                                                                                                     ~~~~~~^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/spectrum.iC:827:139: warning: unused parameter 'max_freq' [-Wunused-parameter]
  827 | double Spectrum<RegularData2D, Peak2D>::getFourierDifference(const Spectrum<RegularData2D, Peak2D>& other_spectrum, float min_freq, float max_freq)
      |                                                                                                                                     ~~~~~~^~~~~~~~
[ 85%] Linking CXX executable ../bin/TEST/Spectrum_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/Spectrum_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Spectrum_test.dir/Spectrum_test_autogen/mocs_compilation.cpp.o CMakeFiles/Spectrum_test.dir/Spectrum_test.C.o -o ../bin/TEST/Spectrum_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 85%] Built target Spectrum_test
make  -f test/CMakeFiles/AtomicContactEnergy_test_autogen.dir/build.make test/CMakeFiles/AtomicContactEnergy_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/AtomicContactEnergy_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target AtomicContactEnergy_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/AtomicContactEnergy_test_autogen.dir/build.make test/CMakeFiles/AtomicContactEnergy_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 85%] Automatic MOC for target AtomicContactEnergy_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/AtomicContactEnergy_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 85%] Built target AtomicContactEnergy_test_autogen
make  -f test/CMakeFiles/AtomicContactEnergy_test.dir/build.make test/CMakeFiles/AtomicContactEnergy_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/AtomicContactEnergy_test.dir/DependInfo.cmake --color=
Scanning dependencies of target AtomicContactEnergy_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/AtomicContactEnergy_test.dir/build.make test/CMakeFiles/AtomicContactEnergy_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 85%] Building CXX object test/CMakeFiles/AtomicContactEnergy_test.dir/AtomicContactEnergy_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/AtomicContactEnergy_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/AtomicContactEnergy_test.dir/AtomicContactEnergy_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/AtomicContactEnergy_test_autogen/mocs_compilation.cpp
[ 85%] Building CXX object test/CMakeFiles/AtomicContactEnergy_test.dir/AtomicContactEnergy_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/AtomicContactEnergy_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/AtomicContactEnergy_test.dir/AtomicContactEnergy_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AtomicContactEnergy_test.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/secondaryStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBdefs.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AtomicContactEnergy_test.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AtomicContactEnergy_test.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/secondaryStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBdefs.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AtomicContactEnergy_test.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AtomicContactEnergy_test.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/secondaryStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBdefs.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AtomicContactEnergy_test.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AtomicContactEnergy_test.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 85%] Linking CXX executable ../bin/TEST/AtomicContactEnergy_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/AtomicContactEnergy_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/AtomicContactEnergy_test.dir/AtomicContactEnergy_test_autogen/mocs_compilation.cpp.o CMakeFiles/AtomicContactEnergy_test.dir/AtomicContactEnergy_test.C.o -o ../bin/TEST/AtomicContactEnergy_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 85%] Built target AtomicContactEnergy_test
make  -f test/CMakeFiles/AtomBondIteratorTraits_test_autogen.dir/build.make test/CMakeFiles/AtomBondIteratorTraits_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/AtomBondIteratorTraits_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target AtomBondIteratorTraits_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/AtomBondIteratorTraits_test_autogen.dir/build.make test/CMakeFiles/AtomBondIteratorTraits_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 85%] Automatic MOC for target AtomBondIteratorTraits_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/AtomBondIteratorTraits_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 85%] Built target AtomBondIteratorTraits_test_autogen
make  -f test/CMakeFiles/AtomBondIteratorTraits_test.dir/build.make test/CMakeFiles/AtomBondIteratorTraits_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/AtomBondIteratorTraits_test.dir/DependInfo.cmake --color=
Scanning dependencies of target AtomBondIteratorTraits_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/AtomBondIteratorTraits_test.dir/build.make test/CMakeFiles/AtomBondIteratorTraits_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 85%] Building CXX object test/CMakeFiles/AtomBondIteratorTraits_test.dir/AtomBondIteratorTraits_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/AtomBondIteratorTraits_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/AtomBondIteratorTraits_test.dir/AtomBondIteratorTraits_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/AtomBondIteratorTraits_test_autogen/mocs_compilation.cpp
[ 85%] Building CXX object test/CMakeFiles/AtomBondIteratorTraits_test.dir/AtomBondIteratorTraits_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/AtomBondIteratorTraits_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/AtomBondIteratorTraits_test.dir/AtomBondIteratorTraits_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AtomBondIteratorTraits_test.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AtomBondIteratorTraits_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AtomBondIteratorTraits_test.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AtomBondIteratorTraits_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AtomBondIteratorTraits_test.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AtomBondIteratorTraits_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AtomBondIteratorTraits_test.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 86%] Linking CXX executable ../bin/TEST/AtomBondIteratorTraits_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/AtomBondIteratorTraits_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/AtomBondIteratorTraits_test.dir/AtomBondIteratorTraits_test_autogen/mocs_compilation.cpp.o CMakeFiles/AtomBondIteratorTraits_test.dir/AtomBondIteratorTraits_test.C.o -o ../bin/TEST/AtomBondIteratorTraits_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 86%] Built target AtomBondIteratorTraits_test
make  -f test/CMakeFiles/AmiraMeshFile_test_autogen.dir/build.make test/CMakeFiles/AmiraMeshFile_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/AmiraMeshFile_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target AmiraMeshFile_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/AmiraMeshFile_test_autogen.dir/build.make test/CMakeFiles/AmiraMeshFile_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 86%] Automatic MOC for target AmiraMeshFile_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/AmiraMeshFile_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 86%] Built target AmiraMeshFile_test_autogen
make  -f test/CMakeFiles/AmiraMeshFile_test.dir/build.make test/CMakeFiles/AmiraMeshFile_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/AmiraMeshFile_test.dir/DependInfo.cmake --color=
Scanning dependencies of target AmiraMeshFile_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/AmiraMeshFile_test.dir/build.make test/CMakeFiles/AmiraMeshFile_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 86%] Building CXX object test/CMakeFiles/AmiraMeshFile_test.dir/AmiraMeshFile_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/AmiraMeshFile_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/AmiraMeshFile_test.dir/AmiraMeshFile_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/AmiraMeshFile_test_autogen/mocs_compilation.cpp
[ 86%] Building CXX object test/CMakeFiles/AmiraMeshFile_test.dir/AmiraMeshFile_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/AmiraMeshFile_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/AmiraMeshFile_test.dir/AmiraMeshFile_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AmiraMeshFile_test.C
[ 86%] Linking CXX executable ../bin/TEST/AmiraMeshFile_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/AmiraMeshFile_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/AmiraMeshFile_test.dir/AmiraMeshFile_test_autogen/mocs_compilation.cpp.o CMakeFiles/AmiraMeshFile_test.dir/AmiraMeshFile_test.C.o -o ../bin/TEST/AmiraMeshFile_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 86%] Built target AmiraMeshFile_test
make  -f test/CMakeFiles/Composite_test6_autogen.dir/build.make test/CMakeFiles/Composite_test6_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/Composite_test6_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target Composite_test6_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/Composite_test6_autogen.dir/build.make test/CMakeFiles/Composite_test6_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 86%] Automatic MOC for target Composite_test6
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/Composite_test6_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 86%] Built target Composite_test6_autogen
make  -f test/CMakeFiles/Composite_test6.dir/build.make test/CMakeFiles/Composite_test6.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/Composite_test6.dir/DependInfo.cmake --color=
Scanning dependencies of target Composite_test6
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/Composite_test6.dir/build.make test/CMakeFiles/Composite_test6.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 86%] Building CXX object test/CMakeFiles/Composite_test6.dir/Composite_test6_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/Composite_test6_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Composite_test6.dir/Composite_test6_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/Composite_test6_autogen/mocs_compilation.cpp
[ 86%] Building CXX object test/CMakeFiles/Composite_test6.dir/Composite_test6.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/Composite_test6_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Composite_test6.dir/Composite_test6.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Composite_test6.C
[ 86%] Linking CXX executable ../bin/TEST/Composite_test6
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/Composite_test6.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Composite_test6.dir/Composite_test6_autogen/mocs_compilation.cpp.o CMakeFiles/Composite_test6.dir/Composite_test6.C.o -o ../bin/TEST/Composite_test6  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 86%] Built target Composite_test6
make  -f test/CMakeFiles/Extractors_test_autogen.dir/build.make test/CMakeFiles/Extractors_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/Extractors_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target Extractors_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/Extractors_test_autogen.dir/build.make test/CMakeFiles/Extractors_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 86%] Automatic MOC for target Extractors_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/Extractors_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 86%] Built target Extractors_test_autogen
make  -f test/CMakeFiles/Extractors_test.dir/build.make test/CMakeFiles/Extractors_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/Extractors_test.dir/DependInfo.cmake --color=
Scanning dependencies of target Extractors_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/Extractors_test.dir/build.make test/CMakeFiles/Extractors_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 86%] Building CXX object test/CMakeFiles/Extractors_test.dir/Extractors_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/Extractors_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Extractors_test.dir/Extractors_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/Extractors_test_autogen/mocs_compilation.cpp
[ 86%] Building CXX object test/CMakeFiles/Extractors_test.dir/Extractors_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/Extractors_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Extractors_test.dir/Extractors_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Extractors_test.C
[ 86%] Linking CXX executable ../bin/TEST/Extractors_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/Extractors_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Extractors_test.dir/Extractors_test_autogen/mocs_compilation.cpp.o CMakeFiles/Extractors_test.dir/Extractors_test.C.o -o ../bin/TEST/Extractors_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 86%] Built target Extractors_test
make  -f test/CMakeFiles/StandardPredicates_test1_autogen.dir/build.make test/CMakeFiles/StandardPredicates_test1_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/StandardPredicates_test1_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target StandardPredicates_test1_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/StandardPredicates_test1_autogen.dir/build.make test/CMakeFiles/StandardPredicates_test1_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 86%] Automatic MOC for target StandardPredicates_test1
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/StandardPredicates_test1_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 86%] Built target StandardPredicates_test1_autogen
make  -f test/CMakeFiles/StandardPredicates_test1.dir/build.make test/CMakeFiles/StandardPredicates_test1.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/StandardPredicates_test1.dir/DependInfo.cmake --color=
Scanning dependencies of target StandardPredicates_test1
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/StandardPredicates_test1.dir/build.make test/CMakeFiles/StandardPredicates_test1.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 86%] Building CXX object test/CMakeFiles/StandardPredicates_test1.dir/StandardPredicates_test1_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/StandardPredicates_test1_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/StandardPredicates_test1.dir/StandardPredicates_test1_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/StandardPredicates_test1_autogen/mocs_compilation.cpp
[ 86%] Building CXX object test/CMakeFiles/StandardPredicates_test1.dir/StandardPredicates_test1.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/StandardPredicates_test1_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/StandardPredicates_test1.dir/StandardPredicates_test1.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/StandardPredicates_test1.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/standardPredicates.h:19,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/StandardPredicates_test1.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/standardPredicates.h:19,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/StandardPredicates_test1.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/standardPredicates.h:19,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/StandardPredicates_test1.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/standardPredicates.h:19,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/StandardPredicates_test1.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/standardPredicates.h:19,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/StandardPredicates_test1.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/standardPredicates.h:19,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/StandardPredicates_test1.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 86%] Linking CXX executable ../bin/TEST/StandardPredicates_test1
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/StandardPredicates_test1.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/StandardPredicates_test1.dir/StandardPredicates_test1_autogen/mocs_compilation.cpp.o CMakeFiles/StandardPredicates_test1.dir/StandardPredicates_test1.C.o -o ../bin/TEST/StandardPredicates_test1  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 86%] Built target StandardPredicates_test1
make  -f test/CMakeFiles/MolmecSupport_test_autogen.dir/build.make test/CMakeFiles/MolmecSupport_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/MolmecSupport_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target MolmecSupport_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/MolmecSupport_test_autogen.dir/build.make test/CMakeFiles/MolmecSupport_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 86%] Automatic MOC for target MolmecSupport_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/MolmecSupport_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 86%] Built target MolmecSupport_test_autogen
make  -f test/CMakeFiles/MolmecSupport_test.dir/build.make test/CMakeFiles/MolmecSupport_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/MolmecSupport_test.dir/DependInfo.cmake --color=
Scanning dependencies of target MolmecSupport_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/MolmecSupport_test.dir/build.make test/CMakeFiles/MolmecSupport_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 86%] Building CXX object test/CMakeFiles/MolmecSupport_test.dir/MolmecSupport_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/MolmecSupport_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/MolmecSupport_test.dir/MolmecSupport_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/MolmecSupport_test_autogen/mocs_compilation.cpp
[ 86%] Building CXX object test/CMakeFiles/MolmecSupport_test.dir/MolmecSupport_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/MolmecSupport_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/MolmecSupport_test.dir/MolmecSupport_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/MolmecSupport_test.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceField.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/support.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/MolmecSupport_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/simpleBox3.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/support.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/MolmecSupport_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceField.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/support.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/MolmecSupport_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/simpleBox3.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/support.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/MolmecSupport_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceField.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/support.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/MolmecSupport_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/simpleBox3.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/support.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/MolmecSupport_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 86%] Linking CXX executable ../bin/TEST/MolmecSupport_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/MolmecSupport_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/MolmecSupport_test.dir/MolmecSupport_test_autogen/mocs_compilation.cpp.o CMakeFiles/MolmecSupport_test.dir/MolmecSupport_test.C.o -o ../bin/TEST/MolmecSupport_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 86%] Built target MolmecSupport_test
make  -f test/CMakeFiles/AmberFF_test_autogen.dir/build.make test/CMakeFiles/AmberFF_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/AmberFF_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target AmberFF_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/AmberFF_test_autogen.dir/build.make test/CMakeFiles/AmberFF_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 88%] Automatic MOC for target AmberFF_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/AmberFF_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 88%] Built target AmberFF_test_autogen
make  -f test/CMakeFiles/AmberFF_test.dir/build.make test/CMakeFiles/AmberFF_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/AmberFF_test.dir/DependInfo.cmake --color=
Scanning dependencies of target AmberFF_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/AmberFF_test.dir/build.make test/CMakeFiles/AmberFF_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 88%] Building CXX object test/CMakeFiles/AmberFF_test.dir/AmberFF_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/AmberFF_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/AmberFF_test.dir/AmberFF_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/AmberFF_test_autogen/mocs_compilation.cpp
[ 88%] Building CXX object test/CMakeFiles/AmberFF_test.dir/AmberFF_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/AmberFF_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/AmberFF_test.dir/AmberFF_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AmberFF_test.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceField.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/AMBER/amber.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AmberFF_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceField.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/AMBER/amber.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AmberFF_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceField.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/AMBER/amber.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AmberFF_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceField.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/AMBER/amber.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AmberFF_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceField.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/AMBER/amber.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AmberFF_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceField.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/AMBER/amber.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AmberFF_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/AMBER/amberTorsion.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AmberFF_test.C:12:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/PARAMETER/cosineTorsion.h: In member function 'void BALL::CosineTorsion::Values::set(const BALL::CosineTorsion::Values&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/PARAMETER/cosineTorsion.h:105:28: warning: implicitly-declared 'BALL::CosineTorsion::SingleValues& BALL::CosineTorsion::SingleValues::operator=(const BALL::CosineTorsion::SingleValues&)' is deprecated [-Wdeprecated-copy]
  105 |      values[i] = v.values[i];
      |                            ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/PARAMETER/cosineTorsion.h:42:4: note: because 'BALL::CosineTorsion::SingleValues' has user-provided 'BALL::CosineTorsion::SingleValues::SingleValues(const BALL::CosineTorsion::SingleValues&)'
   42 |    SingleValues(const SingleValues& v)
      |    ^~~~~~~~~~~~
[ 88%] Linking CXX executable ../bin/TEST/AmberFF_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/AmberFF_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/AmberFF_test.dir/AmberFF_test_autogen/mocs_compilation.cpp.o CMakeFiles/AmberFF_test.dir/AmberFF_test.C.o -o ../bin/TEST/AmberFF_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 88%] Built target AmberFF_test
make  -f test/CMakeFiles/RuleEvaluator_test_autogen.dir/build.make test/CMakeFiles/RuleEvaluator_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/RuleEvaluator_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target RuleEvaluator_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/RuleEvaluator_test_autogen.dir/build.make test/CMakeFiles/RuleEvaluator_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 88%] Automatic MOC for target RuleEvaluator_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/RuleEvaluator_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 88%] Built target RuleEvaluator_test_autogen
make  -f test/CMakeFiles/RuleEvaluator_test.dir/build.make test/CMakeFiles/RuleEvaluator_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/RuleEvaluator_test.dir/DependInfo.cmake --color=
Scanning dependencies of target RuleEvaluator_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/RuleEvaluator_test.dir/build.make test/CMakeFiles/RuleEvaluator_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 88%] Building CXX object test/CMakeFiles/RuleEvaluator_test.dir/RuleEvaluator_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/RuleEvaluator_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/RuleEvaluator_test.dir/RuleEvaluator_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/RuleEvaluator_test_autogen/mocs_compilation.cpp
[ 88%] Building CXX object test/CMakeFiles/RuleEvaluator_test.dir/RuleEvaluator_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/RuleEvaluator_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/RuleEvaluator_test.dir/RuleEvaluator_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/RuleEvaluator_test.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/moleculeIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/RuleEvaluator_test.C:13:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/expressionPredicate.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/expressionTree.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/expressionParser.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/expression.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/ruleEvaluator.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/RuleEvaluator_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/moleculeIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/RuleEvaluator_test.C:13:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/expressionPredicate.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/expressionTree.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/expressionParser.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/expression.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/ruleEvaluator.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/RuleEvaluator_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/moleculeIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/RuleEvaluator_test.C:13:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/expressionPredicate.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/expressionTree.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/expressionParser.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/expression.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/ruleEvaluator.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/RuleEvaluator_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 88%] Linking CXX executable ../bin/TEST/RuleEvaluator_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/RuleEvaluator_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/RuleEvaluator_test.dir/RuleEvaluator_test_autogen/mocs_compilation.cpp.o CMakeFiles/RuleEvaluator_test.dir/RuleEvaluator_test.C.o -o ../bin/TEST/RuleEvaluator_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 88%] Built target RuleEvaluator_test
make  -f test/CMakeFiles/MOLFile_test_autogen.dir/build.make test/CMakeFiles/MOLFile_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/MOLFile_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target MOLFile_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/MOLFile_test_autogen.dir/build.make test/CMakeFiles/MOLFile_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 88%] Automatic MOC for target MOLFile_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/MOLFile_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 88%] Built target MOLFile_test_autogen
make  -f test/CMakeFiles/MOLFile_test.dir/build.make test/CMakeFiles/MOLFile_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/MOLFile_test.dir/DependInfo.cmake --color=
Scanning dependencies of target MOLFile_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/MOLFile_test.dir/build.make test/CMakeFiles/MOLFile_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 88%] Building CXX object test/CMakeFiles/MOLFile_test.dir/MOLFile_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/MOLFile_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/MOLFile_test.dir/MOLFile_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/MOLFile_test_autogen/mocs_compilation.cpp
[ 88%] Building CXX object test/CMakeFiles/MOLFile_test.dir/MOLFile_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/MOLFile_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/MOLFile_test.dir/MOLFile_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/MOLFile_test.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/MOLFile_test.C:14:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/MOLFile.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/MOLFile_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/MOLFile_test.C:14:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/MOLFile.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/MOLFile_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/MOLFile_test.C:14:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/MOLFile.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/MOLFile_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 88%] Linking CXX executable ../bin/TEST/MOLFile_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/MOLFile_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/MOLFile_test.dir/MOLFile_test_autogen/mocs_compilation.cpp.o CMakeFiles/MOLFile_test.dir/MOLFile_test.C.o -o ../bin/TEST/MOLFile_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 88%] Built target MOLFile_test
make  -f test/CMakeFiles/MMFF94_test_autogen.dir/build.make test/CMakeFiles/MMFF94_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/MMFF94_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target MMFF94_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/MMFF94_test_autogen.dir/build.make test/CMakeFiles/MMFF94_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 88%] Automatic MOC for target MMFF94_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/MMFF94_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 88%] Built target MMFF94_test_autogen
make  -f test/CMakeFiles/MMFF94_test.dir/build.make test/CMakeFiles/MMFF94_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/MMFF94_test.dir/DependInfo.cmake --color=
Scanning dependencies of target MMFF94_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/MMFF94_test.dir/build.make test/CMakeFiles/MMFF94_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 88%] Building CXX object test/CMakeFiles/MMFF94_test.dir/MMFF94_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/MMFF94_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/MMFF94_test.dir/MMFF94_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/MMFF94_test_autogen/mocs_compilation.cpp
[ 88%] Building CXX object test/CMakeFiles/MMFF94_test.dir/MMFF94_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/MMFF94_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/MMFF94_test.dir/MMFF94_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/MMFF94_test.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceField.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/MMFF94_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceField.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/MMFF94_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceField.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/MMFF94_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceField.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/MMFF94_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceField.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/MMFF94_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceField.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/MMFF94_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/string.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SYSTEM/file.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/classTest.h:5,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/MMFF94_test.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94ParametersBase::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:43:3: note: in expansion of macro 'BALL_CREATE'
   43 |   BALL_CREATE(MMFF94ParametersBase)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/MMFF94_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/string.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SYSTEM/file.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/classTest.h:5,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/MMFF94_test.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:3: note: in expansion of macro 'BALL_CREATE'
  217 |   BALL_CREATE(MMFF94StretchParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/MMFF94_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:226:34: note: because 'BALL::MMFF94StretchParameters' has user-provided 'const BALL::MMFF94StretchParameters& BALL::MMFF94StretchParameters::operator=(const BALL::MMFF94StretchParameters&)'
  226 |   const MMFF94StretchParameters& operator = (const MMFF94StretchParameters& param)
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:185:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  185 |  class BALL_EXPORT MMFF94StretchParameters:
      |                    ^~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/string.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SYSTEM/file.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/classTest.h:5,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/MMFF94_test.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:3: note: in expansion of macro 'BALL_CREATE'
  217 |   BALL_CREATE(MMFF94StretchParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94BendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:3: note: in expansion of macro 'BALL_CREATE'
  271 |   BALL_CREATE(MMFF94BendParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/MMFF94_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:280:31: note: because 'BALL::MMFF94BendParameters' has user-provided 'const BALL::MMFF94BendParameters& BALL::MMFF94BendParameters::operator=(const BALL::MMFF94BendParameters&)'
  280 |   const MMFF94BendParameters& operator = (const MMFF94BendParameters& param)
      |                               ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:263:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  263 |  class BALL_EXPORT MMFF94BendParameters
      |                    ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/string.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SYSTEM/file.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/classTest.h:5,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/MMFF94_test.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94BendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:3: note: in expansion of macro 'BALL_CREATE'
  271 |   BALL_CREATE(MMFF94BendParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:3: note: in expansion of macro 'BALL_CREATE'
  318 |   BALL_CREATE(MMFF94StretchBendParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/MMFF94_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:327:38: note: because 'BALL::MMFF94StretchBendParameters' has user-provided 'const BALL::MMFF94StretchBendParameters& BALL::MMFF94StretchBendParameters::operator=(const BALL::MMFF94StretchBendParameters&)'
  327 |   const MMFF94StretchBendParameters& operator = (const MMFF94StretchBendParameters& param)
      |                                      ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:310:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  310 |  class BALL_EXPORT MMFF94StretchBendParameters
      |                    ^~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/string.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SYSTEM/file.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/classTest.h:5,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/MMFF94_test.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:3: note: in expansion of macro 'BALL_CREATE'
  318 |   BALL_CREATE(MMFF94StretchBendParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:3: note: in expansion of macro 'BALL_CREATE'
  374 |   BALL_CREATE(MMFF94TorsionParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/MMFF94_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:383:34: note: because 'BALL::MMFF94TorsionParameters' has user-provided 'const BALL::MMFF94TorsionParameters& BALL::MMFF94TorsionParameters::operator=(const BALL::MMFF94TorsionParameters&)'
  383 |   const MMFF94TorsionParameters& operator = (const MMFF94TorsionParameters& param)
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:366:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  366 |  class BALL_EXPORT MMFF94TorsionParameters
      |                    ^~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/string.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SYSTEM/file.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/classTest.h:5,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/MMFF94_test.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:3: note: in expansion of macro 'BALL_CREATE'
  374 |   BALL_CREATE(MMFF94TorsionParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:3: note: in expansion of macro 'BALL_CREATE'
  422 |   BALL_CREATE(MMFF94PlaneParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/MMFF94_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:431:32: note: because 'BALL::MMFF94PlaneParameters' has user-provided 'const BALL::MMFF94PlaneParameters& BALL::MMFF94PlaneParameters::operator=(const BALL::MMFF94PlaneParameters&)'
  431 |   const MMFF94PlaneParameters& operator = (const MMFF94PlaneParameters& param)
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:414:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  414 |  class BALL_EXPORT MMFF94PlaneParameters
      |                    ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/string.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SYSTEM/file.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/classTest.h:5,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/MMFF94_test.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:3: note: in expansion of macro 'BALL_CREATE'
  422 |   BALL_CREATE(MMFF94PlaneParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:3: note: in expansion of macro 'BALL_CREATE'
  473 |   BALL_CREATE(MMFF94VDWParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/MMFF94_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:482:30: note: because 'BALL::MMFF94VDWParameters' has user-provided 'const BALL::MMFF94VDWParameters& BALL::MMFF94VDWParameters::operator=(const BALL::MMFF94VDWParameters&)'
  482 |   const MMFF94VDWParameters& operator = (const MMFF94VDWParameters& param)
      |                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:458:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  458 |  class BALL_EXPORT MMFF94VDWParameters
      |                    ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/string.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SYSTEM/file.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/classTest.h:5,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/MMFF94_test.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:3: note: in expansion of macro 'BALL_CREATE'
  473 |   BALL_CREATE(MMFF94VDWParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94ESParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:3: note: in expansion of macro 'BALL_CREATE'
  530 |   BALL_CREATE(MMFF94ESParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/MMFF94_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:539:29: note: because 'BALL::MMFF94ESParameters' has user-provided 'const BALL::MMFF94ESParameters& BALL::MMFF94ESParameters::operator=(const BALL::MMFF94ESParameters&)'
  539 |   const MMFF94ESParameters& operator = (const MMFF94ESParameters& param)
      |                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:525:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  525 |  class BALL_EXPORT MMFF94ESParameters
      |                    ^~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/string.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SYSTEM/file.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/classTest.h:5,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/MMFF94_test.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94ESParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:3: note: in expansion of macro 'BALL_CREATE'
  530 |   BALL_CREATE(MMFF94ESParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/MMFF94_test.C: In function 'int main(int, char**)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/MMFF94_test.C:136:19: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  136 |  it = s.beginAtom();
      |                   ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceField.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/MMFF94_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/MMFF94_test.C: In function 'int main(int, char**)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/MMFF94_test.C:136:19: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' first required here
  136 |  it = s.beginAtom();
      |                   ^
[ 88%] Linking CXX executable ../bin/TEST/MMFF94_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/MMFF94_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/MMFF94_test.dir/MMFF94_test_autogen/mocs_compilation.cpp.o CMakeFiles/MMFF94_test.dir/MMFF94_test.C.o -o ../bin/TEST/MMFF94_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 88%] Built target MMFF94_test
make  -f test/CMakeFiles/SCWRLRotamerFile_test_autogen.dir/build.make test/CMakeFiles/SCWRLRotamerFile_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/SCWRLRotamerFile_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target SCWRLRotamerFile_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/SCWRLRotamerFile_test_autogen.dir/build.make test/CMakeFiles/SCWRLRotamerFile_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 88%] Automatic MOC for target SCWRLRotamerFile_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/SCWRLRotamerFile_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 88%] Built target SCWRLRotamerFile_test_autogen
make  -f test/CMakeFiles/SCWRLRotamerFile_test.dir/build.make test/CMakeFiles/SCWRLRotamerFile_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/SCWRLRotamerFile_test.dir/DependInfo.cmake --color=
Scanning dependencies of target SCWRLRotamerFile_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/SCWRLRotamerFile_test.dir/build.make test/CMakeFiles/SCWRLRotamerFile_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 88%] Building CXX object test/CMakeFiles/SCWRLRotamerFile_test.dir/SCWRLRotamerFile_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/SCWRLRotamerFile_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/SCWRLRotamerFile_test.dir/SCWRLRotamerFile_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/SCWRLRotamerFile_test_autogen/mocs_compilation.cpp
[ 88%] Building CXX object test/CMakeFiles/SCWRLRotamerFile_test.dir/SCWRLRotamerFile_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/SCWRLRotamerFile_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/SCWRLRotamerFile_test.dir/SCWRLRotamerFile_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/SCWRLRotamerFile_test.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/rotamerLibrary.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/SCWRLRotamerFile_test.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/rotamerLibrary.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/SCWRLRotamerFile_test.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/rotamerLibrary.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/SCWRLRotamerFile_test.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/rotamerLibrary.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/SCWRLRotamerFile_test.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/rotamerLibrary.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/SCWRLRotamerFile_test.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/rotamerLibrary.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/SCWRLRotamerFile_test.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 88%] Linking CXX executable ../bin/TEST/SCWRLRotamerFile_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/SCWRLRotamerFile_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/SCWRLRotamerFile_test.dir/SCWRLRotamerFile_test_autogen/mocs_compilation.cpp.o CMakeFiles/SCWRLRotamerFile_test.dir/SCWRLRotamerFile_test.C.o -o ../bin/TEST/SCWRLRotamerFile_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 88%] Built target SCWRLRotamerFile_test
make  -f test/CMakeFiles/Path_test_autogen.dir/build.make test/CMakeFiles/Path_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/Path_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target Path_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/Path_test_autogen.dir/build.make test/CMakeFiles/Path_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 88%] Automatic MOC for target Path_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/Path_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 88%] Built target Path_test_autogen
make  -f test/CMakeFiles/Path_test.dir/build.make test/CMakeFiles/Path_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/Path_test.dir/DependInfo.cmake --color=
Scanning dependencies of target Path_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/Path_test.dir/build.make test/CMakeFiles/Path_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 88%] Building CXX object test/CMakeFiles/Path_test.dir/Path_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/Path_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Path_test.dir/Path_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/Path_test_autogen/mocs_compilation.cpp
[ 88%] Building CXX object test/CMakeFiles/Path_test.dir/Path_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/Path_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Path_test.dir/Path_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Path_test.C
[ 88%] Linking CXX executable ../bin/TEST/Path_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/Path_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Path_test.dir/Path_test_autogen/mocs_compilation.cpp.o CMakeFiles/Path_test.dir/Path_test.C.o -o ../bin/TEST/Path_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 88%] Built target Path_test
make  -f test/CMakeFiles/String_test3_autogen.dir/build.make test/CMakeFiles/String_test3_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/String_test3_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target String_test3_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/String_test3_autogen.dir/build.make test/CMakeFiles/String_test3_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 88%] Automatic MOC for target String_test3
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/String_test3_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 88%] Built target String_test3_autogen
make  -f test/CMakeFiles/String_test3.dir/build.make test/CMakeFiles/String_test3.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/String_test3.dir/DependInfo.cmake --color=
Scanning dependencies of target String_test3
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/String_test3.dir/build.make test/CMakeFiles/String_test3.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 88%] Building CXX object test/CMakeFiles/String_test3.dir/String_test3_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/String_test3_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/String_test3.dir/String_test3_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/String_test3_autogen/mocs_compilation.cpp
[ 88%] Building CXX object test/CMakeFiles/String_test3.dir/String_test3.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/String_test3_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/String_test3.dir/String_test3.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/String_test3.C
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/String_test3.C: In function 'int main(int, char**)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/String_test3.C:147:37: warning: catching polymorphic type 'class BALL::Exception::GeneralException' by value [-Wcatch-value=]
  147 |  catch (Exception::GeneralException e)
      |                                     ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/String_test3.C:137:8: warning: variable 'x' set but not used [-Wunused-but-set-variable]
  137 |  short x = 0;
      |        ^
[ 88%] Linking CXX executable ../bin/TEST/String_test3
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/String_test3.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/String_test3.dir/String_test3_autogen/mocs_compilation.cpp.o CMakeFiles/String_test3.dir/String_test3.C.o -o ../bin/TEST/String_test3  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 88%] Built target String_test3
make  -f test/CMakeFiles/CharmmFF_test1_autogen.dir/build.make test/CMakeFiles/CharmmFF_test1_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/CharmmFF_test1_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target CharmmFF_test1_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/CharmmFF_test1_autogen.dir/build.make test/CMakeFiles/CharmmFF_test1_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 88%] Automatic MOC for target CharmmFF_test1
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/CharmmFF_test1_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 88%] Built target CharmmFF_test1_autogen
make  -f test/CMakeFiles/CharmmFF_test1.dir/build.make test/CMakeFiles/CharmmFF_test1.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/CharmmFF_test1.dir/DependInfo.cmake --color=
Scanning dependencies of target CharmmFF_test1
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/CharmmFF_test1.dir/build.make test/CMakeFiles/CharmmFF_test1.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 88%] Building CXX object test/CMakeFiles/CharmmFF_test1.dir/CharmmFF_test1_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CharmmFF_test1_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/CharmmFF_test1.dir/CharmmFF_test1_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CharmmFF_test1_autogen/mocs_compilation.cpp
[ 88%] Building CXX object test/CMakeFiles/CharmmFF_test1.dir/CharmmFF_test1.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CharmmFF_test1_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/CharmmFF_test1.dir/CharmmFF_test1.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/CharmmFF_test1.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceField.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/CHARMM/charmm.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/CharmmFF_test1.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceField.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/CHARMM/charmm.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/CharmmFF_test1.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceField.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/CHARMM/charmm.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/CharmmFF_test1.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceField.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/CHARMM/charmm.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/CharmmFF_test1.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceField.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/CHARMM/charmm.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/CharmmFF_test1.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceField.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/CHARMM/charmm.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/CharmmFF_test1.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/CHARMM/charmmTorsion.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/CharmmFF_test1.C:13:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/PARAMETER/cosineTorsion.h: In member function 'void BALL::CosineTorsion::Values::set(const BALL::CosineTorsion::Values&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/PARAMETER/cosineTorsion.h:105:28: warning: implicitly-declared 'BALL::CosineTorsion::SingleValues& BALL::CosineTorsion::SingleValues::operator=(const BALL::CosineTorsion::SingleValues&)' is deprecated [-Wdeprecated-copy]
  105 |      values[i] = v.values[i];
      |                            ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/PARAMETER/cosineTorsion.h:42:4: note: because 'BALL::CosineTorsion::SingleValues' has user-provided 'BALL::CosineTorsion::SingleValues::SingleValues(const BALL::CosineTorsion::SingleValues&)'
   42 |    SingleValues(const SingleValues& v)
      |    ^~~~~~~~~~~~
[ 89%] Linking CXX executable ../bin/TEST/CharmmFF_test1
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/CharmmFF_test1.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/CharmmFF_test1.dir/CharmmFF_test1_autogen/mocs_compilation.cpp.o CMakeFiles/CharmmFF_test1.dir/CharmmFF_test1.C.o -o ../bin/TEST/CharmmFF_test1  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 89%] Built target CharmmFF_test1
make  -f test/CMakeFiles/CharmmFF_test2_autogen.dir/build.make test/CMakeFiles/CharmmFF_test2_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/CharmmFF_test2_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target CharmmFF_test2_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/CharmmFF_test2_autogen.dir/build.make test/CMakeFiles/CharmmFF_test2_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 89%] Automatic MOC for target CharmmFF_test2
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/CharmmFF_test2_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 89%] Built target CharmmFF_test2_autogen
make  -f test/CMakeFiles/CharmmFF_test2.dir/build.make test/CMakeFiles/CharmmFF_test2.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/CharmmFF_test2.dir/DependInfo.cmake --color=
Scanning dependencies of target CharmmFF_test2
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/CharmmFF_test2.dir/build.make test/CMakeFiles/CharmmFF_test2.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 89%] Building CXX object test/CMakeFiles/CharmmFF_test2.dir/CharmmFF_test2_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CharmmFF_test2_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/CharmmFF_test2.dir/CharmmFF_test2_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CharmmFF_test2_autogen/mocs_compilation.cpp
[ 89%] Building CXX object test/CMakeFiles/CharmmFF_test2.dir/CharmmFF_test2.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CharmmFF_test2_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/CharmmFF_test2.dir/CharmmFF_test2.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/CharmmFF_test2.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceField.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/CHARMM/charmm.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/CharmmFF_test2.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceField.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/CHARMM/charmm.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/CharmmFF_test2.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceField.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/CHARMM/charmm.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/CharmmFF_test2.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceField.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/CHARMM/charmm.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/CharmmFF_test2.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceField.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/CHARMM/charmm.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/CharmmFF_test2.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceField.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/CHARMM/charmm.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/CharmmFF_test2.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/CHARMM/charmmTorsion.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/CharmmFF_test2.C:13:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/PARAMETER/cosineTorsion.h: In member function 'void BALL::CosineTorsion::Values::set(const BALL::CosineTorsion::Values&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/PARAMETER/cosineTorsion.h:105:28: warning: implicitly-declared 'BALL::CosineTorsion::SingleValues& BALL::CosineTorsion::SingleValues::operator=(const BALL::CosineTorsion::SingleValues&)' is deprecated [-Wdeprecated-copy]
  105 |      values[i] = v.values[i];
      |                            ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/PARAMETER/cosineTorsion.h:42:4: note: because 'BALL::CosineTorsion::SingleValues' has user-provided 'BALL::CosineTorsion::SingleValues::SingleValues(const BALL::CosineTorsion::SingleValues&)'
   42 |    SingleValues(const SingleValues& v)
      |    ^~~~~~~~~~~~
[ 89%] Linking CXX executable ../bin/TEST/CharmmFF_test2
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/CharmmFF_test2.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/CharmmFF_test2.dir/CharmmFF_test2_autogen/mocs_compilation.cpp.o CMakeFiles/CharmmFF_test2.dir/CharmmFF_test2.C.o -o ../bin/TEST/CharmmFF_test2  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 89%] Built target CharmmFF_test2
make  -f test/CMakeFiles/Angle_test_autogen.dir/build.make test/CMakeFiles/Angle_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/Angle_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target Angle_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/Angle_test_autogen.dir/build.make test/CMakeFiles/Angle_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 89%] Automatic MOC for target Angle_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/Angle_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 89%] Built target Angle_test_autogen
make  -f test/CMakeFiles/Angle_test.dir/build.make test/CMakeFiles/Angle_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/Angle_test.dir/DependInfo.cmake --color=
Scanning dependencies of target Angle_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/Angle_test.dir/build.make test/CMakeFiles/Angle_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 89%] Building CXX object test/CMakeFiles/Angle_test.dir/Angle_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/Angle_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Angle_test.dir/Angle_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/Angle_test_autogen/mocs_compilation.cpp
[ 89%] Building CXX object test/CMakeFiles/Angle_test.dir/Angle_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/Angle_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Angle_test.dir/Angle_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Angle_test.C
[ 89%] Linking CXX executable ../bin/TEST/Angle_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/Angle_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Angle_test.dir/Angle_test_autogen/mocs_compilation.cpp.o CMakeFiles/Angle_test.dir/Angle_test.C.o -o ../bin/TEST/Angle_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 89%] Built target Angle_test
make  -f test/CMakeFiles/ConjugateGradientMinimizer_test_autogen.dir/build.make test/CMakeFiles/ConjugateGradientMinimizer_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/ConjugateGradientMinimizer_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target ConjugateGradientMinimizer_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/ConjugateGradientMinimizer_test_autogen.dir/build.make test/CMakeFiles/ConjugateGradientMinimizer_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 89%] Automatic MOC for target ConjugateGradientMinimizer_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/ConjugateGradientMinimizer_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 89%] Built target ConjugateGradientMinimizer_test_autogen
make  -f test/CMakeFiles/ConjugateGradientMinimizer_test.dir/build.make test/CMakeFiles/ConjugateGradientMinimizer_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/ConjugateGradientMinimizer_test.dir/DependInfo.cmake --color=
Scanning dependencies of target ConjugateGradientMinimizer_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/ConjugateGradientMinimizer_test.dir/build.make test/CMakeFiles/ConjugateGradientMinimizer_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 89%] Building CXX object test/CMakeFiles/ConjugateGradientMinimizer_test.dir/ConjugateGradientMinimizer_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/ConjugateGradientMinimizer_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/ConjugateGradientMinimizer_test.dir/ConjugateGradientMinimizer_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/ConjugateGradientMinimizer_test_autogen/mocs_compilation.cpp
[ 89%] Building CXX object test/CMakeFiles/ConjugateGradientMinimizer_test.dir/ConjugateGradientMinimizer_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/ConjugateGradientMinimizer_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/ConjugateGradientMinimizer_test.dir/ConjugateGradientMinimizer_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ConjugateGradientMinimizer_test.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceField.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/AMBER/amber.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ConjugateGradientMinimizer_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MINIMIZATION/energyMinimizer.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MINIMIZATION/conjugateGradient.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ConjugateGradientMinimizer_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceField.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/AMBER/amber.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ConjugateGradientMinimizer_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MINIMIZATION/energyMinimizer.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MINIMIZATION/conjugateGradient.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ConjugateGradientMinimizer_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceField.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/AMBER/amber.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ConjugateGradientMinimizer_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MINIMIZATION/energyMinimizer.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MINIMIZATION/conjugateGradient.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ConjugateGradientMinimizer_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ConjugateGradientMinimizer_test.C: In function 'int main(int, char**)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ConjugateGradientMinimizer_test.C:410:26: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  410 |  for (atit = S.beginAtom(); +atit; ++atit)
      |                          ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MINIMIZATION/energyMinimizer.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MINIMIZATION/conjugateGradient.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ConjugateGradientMinimizer_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ConjugateGradientMinimizer_test.C: In function 'int main(int, char**)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ConjugateGradientMinimizer_test.C:410:26: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' first required here
  410 |  for (atit = S.beginAtom(); +atit; ++atit)
      |                          ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ConjugateGradientMinimizer_test.C:485:26: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  485 |  for (atit = S.beginAtom(); +atit; ++atit)
      |                          ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MINIMIZATION/energyMinimizer.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MINIMIZATION/conjugateGradient.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ConjugateGradientMinimizer_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ConjugateGradientMinimizer_test.C:558:26: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  558 |  for (atit = S.beginAtom(); +atit; ++atit)
      |                          ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MINIMIZATION/energyMinimizer.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MINIMIZATION/conjugateGradient.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ConjugateGradientMinimizer_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 89%] Linking CXX executable ../bin/TEST/ConjugateGradientMinimizer_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/ConjugateGradientMinimizer_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/ConjugateGradientMinimizer_test.dir/ConjugateGradientMinimizer_test_autogen/mocs_compilation.cpp.o CMakeFiles/ConjugateGradientMinimizer_test.dir/ConjugateGradientMinimizer_test.C.o -o ../bin/TEST/ConjugateGradientMinimizer_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 89%] Built target ConjugateGradientMinimizer_test
make  -f test/CMakeFiles/ShiftedLVMMMinimizer_test2_autogen.dir/build.make test/CMakeFiles/ShiftedLVMMMinimizer_test2_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/ShiftedLVMMMinimizer_test2_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target ShiftedLVMMMinimizer_test2_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/ShiftedLVMMMinimizer_test2_autogen.dir/build.make test/CMakeFiles/ShiftedLVMMMinimizer_test2_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 89%] Automatic MOC for target ShiftedLVMMMinimizer_test2
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/ShiftedLVMMMinimizer_test2_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 89%] Built target ShiftedLVMMMinimizer_test2_autogen
make  -f test/CMakeFiles/ShiftedLVMMMinimizer_test2.dir/build.make test/CMakeFiles/ShiftedLVMMMinimizer_test2.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/ShiftedLVMMMinimizer_test2.dir/DependInfo.cmake --color=
Scanning dependencies of target ShiftedLVMMMinimizer_test2
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/ShiftedLVMMMinimizer_test2.dir/build.make test/CMakeFiles/ShiftedLVMMMinimizer_test2.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 89%] Building CXX object test/CMakeFiles/ShiftedLVMMMinimizer_test2.dir/ShiftedLVMMMinimizer_test2_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/ShiftedLVMMMinimizer_test2_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/ShiftedLVMMMinimizer_test2.dir/ShiftedLVMMMinimizer_test2_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/ShiftedLVMMMinimizer_test2_autogen/mocs_compilation.cpp
[ 89%] Building CXX object test/CMakeFiles/ShiftedLVMMMinimizer_test2.dir/ShiftedLVMMMinimizer_test2.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/ShiftedLVMMMinimizer_test2_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/ShiftedLVMMMinimizer_test2.dir/ShiftedLVMMMinimizer_test2.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ShiftedLVMMMinimizer_test2.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceField.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/AMBER/amber.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ShiftedLVMMMinimizer_test2.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MINIMIZATION/energyMinimizer.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MINIMIZATION/shiftedLVMM.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ShiftedLVMMMinimizer_test2.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceField.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/AMBER/amber.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ShiftedLVMMMinimizer_test2.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MINIMIZATION/energyMinimizer.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MINIMIZATION/shiftedLVMM.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ShiftedLVMMMinimizer_test2.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceField.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/AMBER/amber.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ShiftedLVMMMinimizer_test2.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MINIMIZATION/energyMinimizer.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MINIMIZATION/shiftedLVMM.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ShiftedLVMMMinimizer_test2.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ShiftedLVMMMinimizer_test2.C: In function 'int main(int, char**)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ShiftedLVMMMinimizer_test2.C:358:26: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  358 |  for (atit = S.beginAtom(); +atit; ++atit)
      |                          ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MINIMIZATION/energyMinimizer.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MINIMIZATION/shiftedLVMM.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ShiftedLVMMMinimizer_test2.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ShiftedLVMMMinimizer_test2.C: In function 'int main(int, char**)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ShiftedLVMMMinimizer_test2.C:358:26: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' first required here
  358 |  for (atit = S.beginAtom(); +atit; ++atit)
      |                          ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ShiftedLVMMMinimizer_test2.C:429:26: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  429 |  for (atit = S.beginAtom(); +atit; ++atit)
      |                          ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MINIMIZATION/energyMinimizer.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MINIMIZATION/shiftedLVMM.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ShiftedLVMMMinimizer_test2.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ShiftedLVMMMinimizer_test2.C:500:26: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  500 |  for (atit = S.beginAtom(); +atit; ++atit)
      |                          ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MINIMIZATION/energyMinimizer.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MINIMIZATION/shiftedLVMM.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ShiftedLVMMMinimizer_test2.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 89%] Linking CXX executable ../bin/TEST/ShiftedLVMMMinimizer_test2
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/ShiftedLVMMMinimizer_test2.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/ShiftedLVMMMinimizer_test2.dir/ShiftedLVMMMinimizer_test2_autogen/mocs_compilation.cpp.o CMakeFiles/ShiftedLVMMMinimizer_test2.dir/ShiftedLVMMMinimizer_test2.C.o -o ../bin/TEST/ShiftedLVMMMinimizer_test2  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 89%] Built target ShiftedLVMMMinimizer_test2
make  -f test/CMakeFiles/ShiftedLVMMMinimizer_test3_autogen.dir/build.make test/CMakeFiles/ShiftedLVMMMinimizer_test3_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/ShiftedLVMMMinimizer_test3_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target ShiftedLVMMMinimizer_test3_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/ShiftedLVMMMinimizer_test3_autogen.dir/build.make test/CMakeFiles/ShiftedLVMMMinimizer_test3_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 89%] Automatic MOC for target ShiftedLVMMMinimizer_test3
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/ShiftedLVMMMinimizer_test3_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 89%] Built target ShiftedLVMMMinimizer_test3_autogen
make  -f test/CMakeFiles/ShiftedLVMMMinimizer_test3.dir/build.make test/CMakeFiles/ShiftedLVMMMinimizer_test3.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/ShiftedLVMMMinimizer_test3.dir/DependInfo.cmake --color=
Scanning dependencies of target ShiftedLVMMMinimizer_test3
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/ShiftedLVMMMinimizer_test3.dir/build.make test/CMakeFiles/ShiftedLVMMMinimizer_test3.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 89%] Building CXX object test/CMakeFiles/ShiftedLVMMMinimizer_test3.dir/ShiftedLVMMMinimizer_test3_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/ShiftedLVMMMinimizer_test3_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/ShiftedLVMMMinimizer_test3.dir/ShiftedLVMMMinimizer_test3_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/ShiftedLVMMMinimizer_test3_autogen/mocs_compilation.cpp
[ 89%] Building CXX object test/CMakeFiles/ShiftedLVMMMinimizer_test3.dir/ShiftedLVMMMinimizer_test3.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/ShiftedLVMMMinimizer_test3_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/ShiftedLVMMMinimizer_test3.dir/ShiftedLVMMMinimizer_test3.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ShiftedLVMMMinimizer_test3.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceField.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/AMBER/amber.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ShiftedLVMMMinimizer_test3.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MINIMIZATION/energyMinimizer.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MINIMIZATION/shiftedLVMM.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ShiftedLVMMMinimizer_test3.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceField.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/AMBER/amber.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ShiftedLVMMMinimizer_test3.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MINIMIZATION/energyMinimizer.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MINIMIZATION/shiftedLVMM.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ShiftedLVMMMinimizer_test3.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceField.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/AMBER/amber.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ShiftedLVMMMinimizer_test3.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MINIMIZATION/energyMinimizer.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MINIMIZATION/shiftedLVMM.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ShiftedLVMMMinimizer_test3.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ShiftedLVMMMinimizer_test3.C: In function 'int main(int, char**)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ShiftedLVMMMinimizer_test3.C:69:26: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   69 |  for (atit = S.beginAtom(); +atit; ++atit)
      |                          ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MINIMIZATION/energyMinimizer.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MINIMIZATION/shiftedLVMM.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ShiftedLVMMMinimizer_test3.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ShiftedLVMMMinimizer_test3.C: In function 'int main(int, char**)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ShiftedLVMMMinimizer_test3.C:69:26: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' first required here
   69 |  for (atit = S.beginAtom(); +atit; ++atit)
      |                          ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ShiftedLVMMMinimizer_test3.C:140:26: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  140 |  for (atit = S.beginAtom(); +atit; ++atit)
      |                          ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MINIMIZATION/energyMinimizer.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MINIMIZATION/shiftedLVMM.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ShiftedLVMMMinimizer_test3.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ShiftedLVMMMinimizer_test3.C:211:26: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  211 |  for (atit = S.beginAtom(); +atit; ++atit)
      |                          ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MINIMIZATION/energyMinimizer.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MINIMIZATION/shiftedLVMM.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ShiftedLVMMMinimizer_test3.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ShiftedLVMMMinimizer_test3.C:282:26: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  282 |  for (atit = S.beginAtom(); +atit; ++atit)
      |                          ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MINIMIZATION/energyMinimizer.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MINIMIZATION/shiftedLVMM.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ShiftedLVMMMinimizer_test3.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ShiftedLVMMMinimizer_test3.C:353:26: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  353 |  for (atit = S.beginAtom(); +atit; ++atit)
      |                          ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MINIMIZATION/energyMinimizer.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MINIMIZATION/shiftedLVMM.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ShiftedLVMMMinimizer_test3.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ShiftedLVMMMinimizer_test3.C:424:26: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  424 |  for (atit = S.beginAtom(); +atit; ++atit)
      |                          ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MINIMIZATION/energyMinimizer.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MINIMIZATION/shiftedLVMM.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ShiftedLVMMMinimizer_test3.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ShiftedLVMMMinimizer_test3.C:495:26: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  495 |  for (atit = S.beginAtom(); +atit; ++atit)
      |                          ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MINIMIZATION/energyMinimizer.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MINIMIZATION/shiftedLVMM.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ShiftedLVMMMinimizer_test3.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 89%] Linking CXX executable ../bin/TEST/ShiftedLVMMMinimizer_test3
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/ShiftedLVMMMinimizer_test3.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/ShiftedLVMMMinimizer_test3.dir/ShiftedLVMMMinimizer_test3_autogen/mocs_compilation.cpp.o CMakeFiles/ShiftedLVMMMinimizer_test3.dir/ShiftedLVMMMinimizer_test3.C.o -o ../bin/TEST/ShiftedLVMMMinimizer_test3  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 89%] Built target ShiftedLVMMMinimizer_test3
make  -f test/CMakeFiles/RandomCoilShiftProcessor_test_autogen.dir/build.make test/CMakeFiles/RandomCoilShiftProcessor_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/RandomCoilShiftProcessor_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target RandomCoilShiftProcessor_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/RandomCoilShiftProcessor_test_autogen.dir/build.make test/CMakeFiles/RandomCoilShiftProcessor_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 89%] Automatic MOC for target RandomCoilShiftProcessor_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/RandomCoilShiftProcessor_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 89%] Built target RandomCoilShiftProcessor_test_autogen
make  -f test/CMakeFiles/RandomCoilShiftProcessor_test.dir/build.make test/CMakeFiles/RandomCoilShiftProcessor_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/RandomCoilShiftProcessor_test.dir/DependInfo.cmake --color=
Scanning dependencies of target RandomCoilShiftProcessor_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/RandomCoilShiftProcessor_test.dir/build.make test/CMakeFiles/RandomCoilShiftProcessor_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 89%] Building CXX object test/CMakeFiles/RandomCoilShiftProcessor_test.dir/RandomCoilShiftProcessor_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/RandomCoilShiftProcessor_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/RandomCoilShiftProcessor_test.dir/RandomCoilShiftProcessor_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/RandomCoilShiftProcessor_test_autogen/mocs_compilation.cpp
[ 89%] Building CXX object test/CMakeFiles/RandomCoilShiftProcessor_test.dir/RandomCoilShiftProcessor_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/RandomCoilShiftProcessor_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/RandomCoilShiftProcessor_test.dir/RandomCoilShiftProcessor_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/RandomCoilShiftProcessor_test.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/shiftModule.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/randomCoilShiftProcessor.h:8,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/RandomCoilShiftProcessor_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/shiftModule.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/randomCoilShiftProcessor.h:8,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/RandomCoilShiftProcessor_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/shiftModule.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/randomCoilShiftProcessor.h:8,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/RandomCoilShiftProcessor_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/shiftModule.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/randomCoilShiftProcessor.h:8,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/RandomCoilShiftProcessor_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/shiftModule.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/randomCoilShiftProcessor.h:8,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/RandomCoilShiftProcessor_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/shiftModule.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/randomCoilShiftProcessor.h:8,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/RandomCoilShiftProcessor_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 90%] Linking CXX executable ../bin/TEST/RandomCoilShiftProcessor_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/RandomCoilShiftProcessor_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/RandomCoilShiftProcessor_test.dir/RandomCoilShiftProcessor_test_autogen/mocs_compilation.cpp.o CMakeFiles/RandomCoilShiftProcessor_test.dir/RandomCoilShiftProcessor_test.C.o -o ../bin/TEST/RandomCoilShiftProcessor_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 90%] Built target RandomCoilShiftProcessor_test
make  -f test/CMakeFiles/AtomTypes_test_autogen.dir/build.make test/CMakeFiles/AtomTypes_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/AtomTypes_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target AtomTypes_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/AtomTypes_test_autogen.dir/build.make test/CMakeFiles/AtomTypes_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 90%] Automatic MOC for target AtomTypes_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/AtomTypes_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 90%] Built target AtomTypes_test_autogen
make  -f test/CMakeFiles/AtomTypes_test.dir/build.make test/CMakeFiles/AtomTypes_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/AtomTypes_test.dir/DependInfo.cmake --color=
Scanning dependencies of target AtomTypes_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/AtomTypes_test.dir/build.make test/CMakeFiles/AtomTypes_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 90%] Building CXX object test/CMakeFiles/AtomTypes_test.dir/AtomTypes_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/AtomTypes_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/AtomTypes_test.dir/AtomTypes_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/AtomTypes_test_autogen/mocs_compilation.cpp
[ 90%] Building CXX object test/CMakeFiles/AtomTypes_test.dir/AtomTypes_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/AtomTypes_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/AtomTypes_test.dir/AtomTypes_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AtomTypes_test.C
[ 90%] Linking CXX executable ../bin/TEST/AtomTypes_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/AtomTypes_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/AtomTypes_test.dir/AtomTypes_test_autogen/mocs_compilation.cpp.o CMakeFiles/AtomTypes_test.dir/AtomTypes_test.C.o -o ../bin/TEST/AtomTypes_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 90%] Built target AtomTypes_test
make  -f test/CMakeFiles/CreateSpectrumProcessor_test_autogen.dir/build.make test/CMakeFiles/CreateSpectrumProcessor_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/CreateSpectrumProcessor_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target CreateSpectrumProcessor_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/CreateSpectrumProcessor_test_autogen.dir/build.make test/CMakeFiles/CreateSpectrumProcessor_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 90%] Automatic MOC for target CreateSpectrumProcessor_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/CreateSpectrumProcessor_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 90%] Built target CreateSpectrumProcessor_test_autogen
make  -f test/CMakeFiles/CreateSpectrumProcessor_test.dir/build.make test/CMakeFiles/CreateSpectrumProcessor_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/CreateSpectrumProcessor_test.dir/DependInfo.cmake --color=
Scanning dependencies of target CreateSpectrumProcessor_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/CreateSpectrumProcessor_test.dir/build.make test/CMakeFiles/CreateSpectrumProcessor_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 90%] Building CXX object test/CMakeFiles/CreateSpectrumProcessor_test.dir/CreateSpectrumProcessor_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CreateSpectrumProcessor_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/CreateSpectrumProcessor_test.dir/CreateSpectrumProcessor_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CreateSpectrumProcessor_test_autogen/mocs_compilation.cpp
[ 90%] Building CXX object test/CMakeFiles/CreateSpectrumProcessor_test.dir/CreateSpectrumProcessor_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CreateSpectrumProcessor_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/CreateSpectrumProcessor_test.dir/CreateSpectrumProcessor_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/CreateSpectrumProcessor_test.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/moleculeIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/shiftModule.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/createSpectrumProcessor.h:35,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/CreateSpectrumProcessor_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/peak.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/createSpectrumProcessor.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/CreateSpectrumProcessor_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/moleculeIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/shiftModule.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/createSpectrumProcessor.h:35,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/CreateSpectrumProcessor_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/peak.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/createSpectrumProcessor.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/CreateSpectrumProcessor_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/moleculeIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/shiftModule.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/createSpectrumProcessor.h:35,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/CreateSpectrumProcessor_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/peak.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/createSpectrumProcessor.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/CreateSpectrumProcessor_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 90%] Linking CXX executable ../bin/TEST/CreateSpectrumProcessor_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/CreateSpectrumProcessor_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/CreateSpectrumProcessor_test.dir/CreateSpectrumProcessor_test_autogen/mocs_compilation.cpp.o CMakeFiles/CreateSpectrumProcessor_test.dir/CreateSpectrumProcessor_test.C.o -o ../bin/TEST/CreateSpectrumProcessor_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 90%] Built target CreateSpectrumProcessor_test
make  -f test/CMakeFiles/PCMCavFreeEnergyProcessor_test_autogen.dir/build.make test/CMakeFiles/PCMCavFreeEnergyProcessor_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/PCMCavFreeEnergyProcessor_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target PCMCavFreeEnergyProcessor_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/PCMCavFreeEnergyProcessor_test_autogen.dir/build.make test/CMakeFiles/PCMCavFreeEnergyProcessor_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 90%] Automatic MOC for target PCMCavFreeEnergyProcessor_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/PCMCavFreeEnergyProcessor_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 90%] Built target PCMCavFreeEnergyProcessor_test_autogen
make  -f test/CMakeFiles/PCMCavFreeEnergyProcessor_test.dir/build.make test/CMakeFiles/PCMCavFreeEnergyProcessor_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/PCMCavFreeEnergyProcessor_test.dir/DependInfo.cmake --color=
Scanning dependencies of target PCMCavFreeEnergyProcessor_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/PCMCavFreeEnergyProcessor_test.dir/build.make test/CMakeFiles/PCMCavFreeEnergyProcessor_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 90%] Building CXX object test/CMakeFiles/PCMCavFreeEnergyProcessor_test.dir/PCMCavFreeEnergyProcessor_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/PCMCavFreeEnergyProcessor_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/PCMCavFreeEnergyProcessor_test.dir/PCMCavFreeEnergyProcessor_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/PCMCavFreeEnergyProcessor_test_autogen/mocs_compilation.cpp
[ 90%] Building CXX object test/CMakeFiles/PCMCavFreeEnergyProcessor_test.dir/PCMCavFreeEnergyProcessor_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/PCMCavFreeEnergyProcessor_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/PCMCavFreeEnergyProcessor_test.dir/PCMCavFreeEnergyProcessor_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/PCMCavFreeEnergyProcessor_test.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/ENERGY/energyProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SOLVATION/PCMCavFreeEnergyProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/PCMCavFreeEnergyProcessor_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/ENERGY/energyProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SOLVATION/PCMCavFreeEnergyProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/PCMCavFreeEnergyProcessor_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/ENERGY/energyProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SOLVATION/PCMCavFreeEnergyProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/PCMCavFreeEnergyProcessor_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/ENERGY/energyProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SOLVATION/PCMCavFreeEnergyProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/PCMCavFreeEnergyProcessor_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/ENERGY/energyProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SOLVATION/PCMCavFreeEnergyProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/PCMCavFreeEnergyProcessor_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/ENERGY/energyProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SOLVATION/PCMCavFreeEnergyProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/PCMCavFreeEnergyProcessor_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 90%] Linking CXX executable ../bin/TEST/PCMCavFreeEnergyProcessor_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/PCMCavFreeEnergyProcessor_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/PCMCavFreeEnergyProcessor_test.dir/PCMCavFreeEnergyProcessor_test_autogen/mocs_compilation.cpp.o CMakeFiles/PCMCavFreeEnergyProcessor_test.dir/PCMCavFreeEnergyProcessor_test.C.o -o ../bin/TEST/PCMCavFreeEnergyProcessor_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 90%] Built target PCMCavFreeEnergyProcessor_test
make  -f test/CMakeFiles/HaighMallionShiftProcessor_test_autogen.dir/build.make test/CMakeFiles/HaighMallionShiftProcessor_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/HaighMallionShiftProcessor_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target HaighMallionShiftProcessor_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/HaighMallionShiftProcessor_test_autogen.dir/build.make test/CMakeFiles/HaighMallionShiftProcessor_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 90%] Automatic MOC for target HaighMallionShiftProcessor_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/HaighMallionShiftProcessor_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 90%] Built target HaighMallionShiftProcessor_test_autogen
make  -f test/CMakeFiles/HaighMallionShiftProcessor_test.dir/build.make test/CMakeFiles/HaighMallionShiftProcessor_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/HaighMallionShiftProcessor_test.dir/DependInfo.cmake --color=
Scanning dependencies of target HaighMallionShiftProcessor_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/HaighMallionShiftProcessor_test.dir/build.make test/CMakeFiles/HaighMallionShiftProcessor_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 90%] Building CXX object test/CMakeFiles/HaighMallionShiftProcessor_test.dir/HaighMallionShiftProcessor_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/HaighMallionShiftProcessor_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/HaighMallionShiftProcessor_test.dir/HaighMallionShiftProcessor_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/HaighMallionShiftProcessor_test_autogen/mocs_compilation.cpp
[ 90%] Building CXX object test/CMakeFiles/HaighMallionShiftProcessor_test.dir/HaighMallionShiftProcessor_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/HaighMallionShiftProcessor_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/HaighMallionShiftProcessor_test.dir/HaighMallionShiftProcessor_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/HaighMallionShiftProcessor_test.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/shiftModule.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/haighMallionShiftProcessor.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/HaighMallionShiftProcessor_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/shiftModule.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/haighMallionShiftProcessor.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/HaighMallionShiftProcessor_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/shiftModule.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/haighMallionShiftProcessor.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/HaighMallionShiftProcessor_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/shiftModule.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/haighMallionShiftProcessor.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/HaighMallionShiftProcessor_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/shiftModule.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/haighMallionShiftProcessor.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/HaighMallionShiftProcessor_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/shiftModule.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/haighMallionShiftProcessor.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/HaighMallionShiftProcessor_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 90%] Linking CXX executable ../bin/TEST/HaighMallionShiftProcessor_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/HaighMallionShiftProcessor_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/HaighMallionShiftProcessor_test.dir/HaighMallionShiftProcessor_test_autogen/mocs_compilation.cpp.o CMakeFiles/HaighMallionShiftProcessor_test.dir/HaighMallionShiftProcessor_test.C.o -o ../bin/TEST/HaighMallionShiftProcessor_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 90%] Built target HaighMallionShiftProcessor_test
make  -f test/CMakeFiles/RotamerLibrary_test_autogen.dir/build.make test/CMakeFiles/RotamerLibrary_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/RotamerLibrary_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target RotamerLibrary_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/RotamerLibrary_test_autogen.dir/build.make test/CMakeFiles/RotamerLibrary_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 90%] Automatic MOC for target RotamerLibrary_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/RotamerLibrary_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 90%] Built target RotamerLibrary_test_autogen
make  -f test/CMakeFiles/RotamerLibrary_test.dir/build.make test/CMakeFiles/RotamerLibrary_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/RotamerLibrary_test.dir/DependInfo.cmake --color=
Scanning dependencies of target RotamerLibrary_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/RotamerLibrary_test.dir/build.make test/CMakeFiles/RotamerLibrary_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 90%] Building CXX object test/CMakeFiles/RotamerLibrary_test.dir/RotamerLibrary_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/RotamerLibrary_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/RotamerLibrary_test.dir/RotamerLibrary_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/RotamerLibrary_test_autogen/mocs_compilation.cpp
[ 90%] Building CXX object test/CMakeFiles/RotamerLibrary_test.dir/RotamerLibrary_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/RotamerLibrary_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/RotamerLibrary_test.dir/RotamerLibrary_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/RotamerLibrary_test.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/rotamerLibrary.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/RotamerLibrary_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/rotamerLibrary.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/RotamerLibrary_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/rotamerLibrary.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/RotamerLibrary_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/rotamerLibrary.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/RotamerLibrary_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/rotamerLibrary.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/RotamerLibrary_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/rotamerLibrary.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/RotamerLibrary_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/RotamerLibrary_test.C: In function 'int main(int, char**)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/RotamerLibrary_test.C:154:30: warning: implicitly-declared 'BALL::Rotamer& BALL::Rotamer::operator=(const BALL::Rotamer&)' is deprecated [-Wdeprecated-copy]
  154 |   rotamer = rrs->getRotamer(0);
      |                              ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/rotamerLibrary.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/RotamerLibrary_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/residueRotamerSet.h:48:3: note: because 'BALL::Rotamer' has user-provided 'BALL::Rotamer::Rotamer(const BALL::Rotamer&)'
   48 |   Rotamer(const Rotamer& rotamer);
      |   ^~~~~~~
[ 90%] Linking CXX executable ../bin/TEST/RotamerLibrary_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/RotamerLibrary_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/RotamerLibrary_test.dir/RotamerLibrary_test_autogen/mocs_compilation.cpp.o CMakeFiles/RotamerLibrary_test.dir/RotamerLibrary_test.C.o -o ../bin/TEST/RotamerLibrary_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 90%] Built target RotamerLibrary_test
make  -f test/CMakeFiles/ShiftModel_test_autogen.dir/build.make test/CMakeFiles/ShiftModel_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/ShiftModel_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target ShiftModel_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/ShiftModel_test_autogen.dir/build.make test/CMakeFiles/ShiftModel_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 90%] Automatic MOC for target ShiftModel_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/ShiftModel_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 90%] Built target ShiftModel_test_autogen
make  -f test/CMakeFiles/ShiftModel_test.dir/build.make test/CMakeFiles/ShiftModel_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/ShiftModel_test.dir/DependInfo.cmake --color=
Scanning dependencies of target ShiftModel_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/ShiftModel_test.dir/build.make test/CMakeFiles/ShiftModel_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 90%] Building CXX object test/CMakeFiles/ShiftModel_test.dir/ShiftModel_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/ShiftModel_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/ShiftModel_test.dir/ShiftModel_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/ShiftModel_test_autogen/mocs_compilation.cpp
[ 90%] Building CXX object test/CMakeFiles/ShiftModel_test.dir/ShiftModel_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/ShiftModel_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/ShiftModel_test.dir/ShiftModel_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ShiftModel_test.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/shiftModule.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/shiftModel.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ShiftModel_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/shiftModule.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/shiftModel.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ShiftModel_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/shiftModule.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/shiftModel.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ShiftModel_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/shiftModule.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/shiftModel.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ShiftModel_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/shiftModule.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/shiftModel.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ShiftModel_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/shiftModule.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/shiftModel.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ShiftModel_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 90%] Linking CXX executable ../bin/TEST/ShiftModel_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/ShiftModel_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/ShiftModel_test.dir/ShiftModel_test_autogen/mocs_compilation.cpp.o CMakeFiles/ShiftModel_test.dir/ShiftModel_test.C.o -o ../bin/TEST/ShiftModel_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 90%] Built target ShiftModel_test
make  -f test/CMakeFiles/Peak_test_autogen.dir/build.make test/CMakeFiles/Peak_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/Peak_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target Peak_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/Peak_test_autogen.dir/build.make test/CMakeFiles/Peak_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 90%] Automatic MOC for target Peak_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/Peak_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 90%] Built target Peak_test_autogen
make  -f test/CMakeFiles/Peak_test.dir/build.make test/CMakeFiles/Peak_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/Peak_test.dir/DependInfo.cmake --color=
Scanning dependencies of target Peak_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/Peak_test.dir/build.make test/CMakeFiles/Peak_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 90%] Building CXX object test/CMakeFiles/Peak_test.dir/Peak_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/Peak_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Peak_test.dir/Peak_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/Peak_test_autogen/mocs_compilation.cpp
[ 90%] Building CXX object test/CMakeFiles/Peak_test.dir/Peak_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/Peak_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Peak_test.dir/Peak_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Peak_test.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/secondaryStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBdefs.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Peak_test.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/peak.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Peak_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/secondaryStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBdefs.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Peak_test.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/peak.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Peak_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/secondaryStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBdefs.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Peak_test.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/peak.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Peak_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 90%] Linking CXX executable ../bin/TEST/Peak_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/Peak_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Peak_test.dir/Peak_test_autogen/mocs_compilation.cpp.o CMakeFiles/Peak_test.dir/Peak_test.C.o -o ../bin/TEST/Peak_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 90%] Built target Peak_test
make  -f test/CMakeFiles/File_test1_autogen.dir/build.make test/CMakeFiles/File_test1_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/File_test1_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target File_test1_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/File_test1_autogen.dir/build.make test/CMakeFiles/File_test1_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 90%] Automatic MOC for target File_test1
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/File_test1_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 90%] Built target File_test1_autogen
make  -f test/CMakeFiles/File_test1.dir/build.make test/CMakeFiles/File_test1.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/File_test1.dir/DependInfo.cmake --color=
Scanning dependencies of target File_test1
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/File_test1.dir/build.make test/CMakeFiles/File_test1.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 90%] Building CXX object test/CMakeFiles/File_test1.dir/File_test1_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/File_test1_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/File_test1.dir/File_test1_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/File_test1_autogen/mocs_compilation.cpp
[ 90%] Building CXX object test/CMakeFiles/File_test1.dir/File_test1.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/File_test1_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/File_test1.dir/File_test1.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/File_test1.C
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/File_test1.C: In function 'int main(int, char**)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/File_test1.C:41:8: warning: variable 'f2' set but not used [-Wunused-but-set-variable]
   41 |  File* f2;
      |        ^~
[ 90%] Linking CXX executable ../bin/TEST/File_test1
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/File_test1.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/File_test1.dir/File_test1_autogen/mocs_compilation.cpp.o CMakeFiles/File_test1.dir/File_test1.C.o -o ../bin/TEST/File_test1  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 90%] Built target File_test1
make  -f test/CMakeFiles/PeakList_test_autogen.dir/build.make test/CMakeFiles/PeakList_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/PeakList_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target PeakList_test_autogen
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[ 90%] Automatic MOC for target PeakList_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/PeakList_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
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make  -f test/CMakeFiles/PeakList_test.dir/build.make test/CMakeFiles/PeakList_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/PeakList_test.dir/DependInfo.cmake --color=
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make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 90%] Building CXX object test/CMakeFiles/PeakList_test.dir/PeakList_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/PeakList_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/PeakList_test.dir/PeakList_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/PeakList_test_autogen/mocs_compilation.cpp
[ 90%] Building CXX object test/CMakeFiles/PeakList_test.dir/PeakList_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/PeakList_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/PeakList_test.dir/PeakList_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/PeakList_test.C
[ 90%] Linking CXX executable ../bin/TEST/PeakList_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/PeakList_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/PeakList_test.dir/PeakList_test_autogen/mocs_compilation.cpp.o CMakeFiles/PeakList_test.dir/PeakList_test.C.o -o ../bin/TEST/PeakList_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 90%] Built target PeakList_test
make  -f test/CMakeFiles/System_test_autogen.dir/build.make test/CMakeFiles/System_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/System_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target System_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/System_test_autogen.dir/build.make test/CMakeFiles/System_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 90%] Automatic MOC for target System_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/System_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 90%] Built target System_test_autogen
make  -f test/CMakeFiles/System_test.dir/build.make test/CMakeFiles/System_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/System_test.dir/DependInfo.cmake --color=
Scanning dependencies of target System_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/System_test.dir/build.make test/CMakeFiles/System_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 90%] Building CXX object test/CMakeFiles/System_test.dir/System_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/System_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/System_test.dir/System_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/System_test_autogen/mocs_compilation.cpp
[ 90%] Building CXX object test/CMakeFiles/System_test.dir/System_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/System_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/System_test.dir/System_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/System_test.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/System_test.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/System_test.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/System_test.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/System_test.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/System_test.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/System_test.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 90%] Linking CXX executable ../bin/TEST/System_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/System_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/System_test.dir/System_test_autogen/mocs_compilation.cpp.o CMakeFiles/System_test.dir/System_test.C.o -o ../bin/TEST/System_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
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make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
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make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/HashGrid3DataIteratorTraits_test.dir/DependInfo.cmake --color=
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[ 90%] Building CXX object test/CMakeFiles/HashGrid3DataIteratorTraits_test.dir/HashGrid3DataIteratorTraits_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/HashGrid3DataIteratorTraits_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/HashGrid3DataIteratorTraits_test.dir/HashGrid3DataIteratorTraits_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/HashGrid3DataIteratorTraits_test_autogen/mocs_compilation.cpp
[ 90%] Building CXX object test/CMakeFiles/HashGrid3DataIteratorTraits_test.dir/HashGrid3DataIteratorTraits_test.C.o
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[ 90%] Linking CXX executable ../bin/TEST/HashGrid3DataIteratorTraits_test
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/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/HashGrid3DataIteratorTraits_test.dir/HashGrid3DataIteratorTraits_test_autogen/mocs_compilation.cpp.o CMakeFiles/HashGrid3DataIteratorTraits_test.dir/HashGrid3DataIteratorTraits_test.C.o -o ../bin/TEST/HashGrid3DataIteratorTraits_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
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[ 90%] Building CXX object test/CMakeFiles/BinaryFileAdaptor_test.dir/BinaryFileAdaptor_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/BinaryFileAdaptor_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/BinaryFileAdaptor_test.dir/BinaryFileAdaptor_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/BinaryFileAdaptor_test_autogen/mocs_compilation.cpp
[ 90%] Building CXX object test/CMakeFiles/BinaryFileAdaptor_test.dir/BinaryFileAdaptor_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/BinaryFileAdaptor_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/BinaryFileAdaptor_test.dir/BinaryFileAdaptor_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/BinaryFileAdaptor_test.C
[ 90%] Linking CXX executable ../bin/TEST/BinaryFileAdaptor_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/BinaryFileAdaptor_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/BinaryFileAdaptor_test.dir/BinaryFileAdaptor_test_autogen/mocs_compilation.cpp.o CMakeFiles/BinaryFileAdaptor_test.dir/BinaryFileAdaptor_test.C.o -o ../bin/TEST/BinaryFileAdaptor_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 90%] Built target BinaryFileAdaptor_test
make  -f test/CMakeFiles/Vector2_test_autogen.dir/build.make test/CMakeFiles/Vector2_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/Vector2_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target Vector2_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/Vector2_test_autogen.dir/build.make test/CMakeFiles/Vector2_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 90%] Automatic MOC for target Vector2_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/Vector2_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 90%] Built target Vector2_test_autogen
make  -f test/CMakeFiles/Vector2_test.dir/build.make test/CMakeFiles/Vector2_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/Vector2_test.dir/DependInfo.cmake --color=
Scanning dependencies of target Vector2_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/Vector2_test.dir/build.make test/CMakeFiles/Vector2_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 90%] Building CXX object test/CMakeFiles/Vector2_test.dir/Vector2_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/Vector2_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Vector2_test.dir/Vector2_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/Vector2_test_autogen/mocs_compilation.cpp
[ 90%] Building CXX object test/CMakeFiles/Vector2_test.dir/Vector2_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/Vector2_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Vector2_test.dir/Vector2_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Vector2_test.C
[ 90%] Linking CXX executable ../bin/TEST/Vector2_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/Vector2_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Vector2_test.dir/Vector2_test_autogen/mocs_compilation.cpp.o CMakeFiles/Vector2_test.dir/Vector2_test.C.o -o ../bin/TEST/Vector2_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 90%] Built target Vector2_test
make  -f test/CMakeFiles/Bruker1DFile_test_autogen.dir/build.make test/CMakeFiles/Bruker1DFile_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/Bruker1DFile_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target Bruker1DFile_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/Bruker1DFile_test_autogen.dir/build.make test/CMakeFiles/Bruker1DFile_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 90%] Automatic MOC for target Bruker1DFile_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/Bruker1DFile_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 90%] Built target Bruker1DFile_test_autogen
make  -f test/CMakeFiles/Bruker1DFile_test.dir/build.make test/CMakeFiles/Bruker1DFile_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/Bruker1DFile_test.dir/DependInfo.cmake --color=
Scanning dependencies of target Bruker1DFile_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/Bruker1DFile_test.dir/build.make test/CMakeFiles/Bruker1DFile_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 90%] Building CXX object test/CMakeFiles/Bruker1DFile_test.dir/Bruker1DFile_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/Bruker1DFile_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Bruker1DFile_test.dir/Bruker1DFile_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/Bruker1DFile_test_autogen/mocs_compilation.cpp
[ 90%] Building CXX object test/CMakeFiles/Bruker1DFile_test.dir/Bruker1DFile_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/Bruker1DFile_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Bruker1DFile_test.dir/Bruker1DFile_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Bruker1DFile_test.C
[ 90%] Linking CXX executable ../bin/TEST/Bruker1DFile_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/Bruker1DFile_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Bruker1DFile_test.dir/Bruker1DFile_test_autogen/mocs_compilation.cpp.o CMakeFiles/Bruker1DFile_test.dir/Bruker1DFile_test.C.o -o ../bin/TEST/Bruker1DFile_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 90%] Built target Bruker1DFile_test
make  -f test/CMakeFiles/HashGrid3NeighborBoxItem_test_autogen.dir/build.make test/CMakeFiles/HashGrid3NeighborBoxItem_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/HashGrid3NeighborBoxItem_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target HashGrid3NeighborBoxItem_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/HashGrid3NeighborBoxItem_test_autogen.dir/build.make test/CMakeFiles/HashGrid3NeighborBoxItem_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 90%] Automatic MOC for target HashGrid3NeighborBoxItem_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/HashGrid3NeighborBoxItem_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 90%] Built target HashGrid3NeighborBoxItem_test_autogen
make  -f test/CMakeFiles/HashGrid3NeighborBoxItem_test.dir/build.make test/CMakeFiles/HashGrid3NeighborBoxItem_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/HashGrid3NeighborBoxItem_test.dir/DependInfo.cmake --color=
Scanning dependencies of target HashGrid3NeighborBoxItem_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/HashGrid3NeighborBoxItem_test.dir/build.make test/CMakeFiles/HashGrid3NeighborBoxItem_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 90%] Building CXX object test/CMakeFiles/HashGrid3NeighborBoxItem_test.dir/HashGrid3NeighborBoxItem_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/HashGrid3NeighborBoxItem_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/HashGrid3NeighborBoxItem_test.dir/HashGrid3NeighborBoxItem_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/HashGrid3NeighborBoxItem_test_autogen/mocs_compilation.cpp
[ 90%] Building CXX object test/CMakeFiles/HashGrid3NeighborBoxItem_test.dir/HashGrid3NeighborBoxItem_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/HashGrid3NeighborBoxItem_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/HashGrid3NeighborBoxItem_test.dir/HashGrid3NeighborBoxItem_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/HashGrid3NeighborBoxItem_test.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/HashGrid3NeighborBoxItem_test.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h: In instantiation of 'BALL::Index BALL::HashGrid3<Item>::getIndex_(const BALL::HashGridBox3<Item>&) const [with Item = int; BALL::Index = int]':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:1516:17:   required from 'bool BALL::HashGrid3<Item>::getIndices(const BALL::HashGridBox3<Item>&, BALL::Position&, BALL::Position&, BALL::Position&) const [with Item = int; BALL::Position = unsigned int]'
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:563:21:   required from 'void BALL::HashGridBox3<Item>::getIndices(BALL::Position&, BALL::Position&, BALL::Position&) [with Item = int; BALL::Position = unsigned int]'
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:206:13:   required from 'BALL::HashGridBox3<Item>::BoxIteratorTraits::BoxIteratorTraits(const BALL::HashGridBox3<Item>&) [with Item = int]'
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/baseIterator.h:190:23:   required from 'BALL::BaseIterator<Container, DataType, Position, Traits>::BaseIterator(const Container&) [with Container = BALL::HashGridBox3<int>; DataType = BALL::HashGridBox3<int>; Position = unsigned int; Traits = BALL::HashGridBox3<int>::BoxIteratorTraits]'
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/forwardIterator.h:128:67:   required from 'BALL::ConstForwardIterator<Container, DataType, Position, Traits>::ConstForwardIterator(const Container&) [with Container = BALL::HashGridBox3<int>; DataType = BALL::HashGridBox3<int>; Position = unsigned int; Traits = BALL::HashGridBox3<int>::BoxIteratorTraits]'
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/forwardIterator.h:298:20:   required from 'BALL::ForwardIterator<Container, DataType, Position, Traits>::ForwardIterator(const Container&) [with Container = BALL::HashGridBox3<int>; DataType = BALL::HashGridBox3<int>; Position = unsigned int; Traits = BALL::HashGridBox3<int>::BoxIteratorTraits]'
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/forwardIterator.h:309:19:   required from 'static BALL::ForwardIterator<Container, DataType, Position, Traits> BALL::ForwardIterator<Container, DataType, Position, Traits>::begin(const Container&) [with Container = BALL::HashGridBox3<int>; DataType = BALL::HashGridBox3<int>; Position = unsigned int; Traits = BALL::HashGridBox3<int>::BoxIteratorTraits]'
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:332:29:   required from 'BALL::HashGridBox3<Item>::BoxIterator BALL::HashGridBox3<Item>::beginBox() [with Item = int; BALL::HashGridBox3<Item>::BoxIterator = BALL::ForwardIterator<BALL::HashGridBox3<int>, BALL::HashGridBox3<int>, unsigned int, BALL::HashGridBox3<int>::BoxIteratorTraits>]'
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/HashGrid3NeighborBoxItem_test.C:42:71:   required from here
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:1726:46: warning: comparison of integer expressions of different signedness: 'int' and 'BALL::Size' {aka 'unsigned int'} [-Wsign-compare]
 1726 |   if ((&box < &box_[0]) || (&box - &box_[0]  >= getSize()))
      |                            ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~
[ 90%] Linking CXX executable ../bin/TEST/HashGrid3NeighborBoxItem_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/HashGrid3NeighborBoxItem_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/HashGrid3NeighborBoxItem_test.dir/HashGrid3NeighborBoxItem_test_autogen/mocs_compilation.cpp.o CMakeFiles/HashGrid3NeighborBoxItem_test.dir/HashGrid3NeighborBoxItem_test.C.o -o ../bin/TEST/HashGrid3NeighborBoxItem_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 90%] Built target HashGrid3NeighborBoxItem_test
make  -f test/CMakeFiles/ShiftedLVMMMinimizer_test1_autogen.dir/build.make test/CMakeFiles/ShiftedLVMMMinimizer_test1_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/ShiftedLVMMMinimizer_test1_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target ShiftedLVMMMinimizer_test1_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/ShiftedLVMMMinimizer_test1_autogen.dir/build.make test/CMakeFiles/ShiftedLVMMMinimizer_test1_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 92%] Automatic MOC for target ShiftedLVMMMinimizer_test1
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/ShiftedLVMMMinimizer_test1_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 92%] Built target ShiftedLVMMMinimizer_test1_autogen
make  -f test/CMakeFiles/ShiftedLVMMMinimizer_test1.dir/build.make test/CMakeFiles/ShiftedLVMMMinimizer_test1.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/ShiftedLVMMMinimizer_test1.dir/DependInfo.cmake --color=
Scanning dependencies of target ShiftedLVMMMinimizer_test1
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/ShiftedLVMMMinimizer_test1.dir/build.make test/CMakeFiles/ShiftedLVMMMinimizer_test1.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 92%] Building CXX object test/CMakeFiles/ShiftedLVMMMinimizer_test1.dir/ShiftedLVMMMinimizer_test1_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/ShiftedLVMMMinimizer_test1_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/ShiftedLVMMMinimizer_test1.dir/ShiftedLVMMMinimizer_test1_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/ShiftedLVMMMinimizer_test1_autogen/mocs_compilation.cpp
[ 92%] Building CXX object test/CMakeFiles/ShiftedLVMMMinimizer_test1.dir/ShiftedLVMMMinimizer_test1.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/ShiftedLVMMMinimizer_test1_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/ShiftedLVMMMinimizer_test1.dir/ShiftedLVMMMinimizer_test1.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ShiftedLVMMMinimizer_test1.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceField.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/AMBER/amber.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ShiftedLVMMMinimizer_test1.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MINIMIZATION/energyMinimizer.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MINIMIZATION/shiftedLVMM.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ShiftedLVMMMinimizer_test1.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceField.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/AMBER/amber.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ShiftedLVMMMinimizer_test1.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MINIMIZATION/energyMinimizer.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MINIMIZATION/shiftedLVMM.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ShiftedLVMMMinimizer_test1.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceField.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/AMBER/amber.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ShiftedLVMMMinimizer_test1.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MINIMIZATION/energyMinimizer.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MINIMIZATION/shiftedLVMM.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ShiftedLVMMMinimizer_test1.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 92%] Linking CXX executable ../bin/TEST/ShiftedLVMMMinimizer_test1
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/ShiftedLVMMMinimizer_test1.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/ShiftedLVMMMinimizer_test1.dir/ShiftedLVMMMinimizer_test1_autogen/mocs_compilation.cpp.o CMakeFiles/ShiftedLVMMMinimizer_test1.dir/ShiftedLVMMMinimizer_test1.C.o -o ../bin/TEST/ShiftedLVMMMinimizer_test1  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 92%] Built target ShiftedLVMMMinimizer_test1
make  -f test/CMakeFiles/SDGenerator_test_autogen.dir/build.make test/CMakeFiles/SDGenerator_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/SDGenerator_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target SDGenerator_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/SDGenerator_test_autogen.dir/build.make test/CMakeFiles/SDGenerator_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 92%] Automatic MOC for target SDGenerator_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/SDGenerator_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 92%] Built target SDGenerator_test_autogen
make  -f test/CMakeFiles/SDGenerator_test.dir/build.make test/CMakeFiles/SDGenerator_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/SDGenerator_test.dir/DependInfo.cmake --color=
Scanning dependencies of target SDGenerator_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/SDGenerator_test.dir/build.make test/CMakeFiles/SDGenerator_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 92%] Building CXX object test/CMakeFiles/SDGenerator_test.dir/SDGenerator_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/SDGenerator_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/SDGenerator_test.dir/SDGenerator_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/SDGenerator_test_autogen/mocs_compilation.cpp
[ 92%] Building CXX object test/CMakeFiles/SDGenerator_test.dir/SDGenerator_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/SDGenerator_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/SDGenerator_test.dir/SDGenerator_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/SDGenerator_test.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/ringAnalyser.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/sdGenerator.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/SDGenerator_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/sdGenerator.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/SDGenerator_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/ringAnalyser.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/sdGenerator.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/SDGenerator_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/sdGenerator.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/SDGenerator_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/ringAnalyser.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/sdGenerator.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/SDGenerator_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/sdGenerator.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/SDGenerator_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 92%] Linking CXX executable ../bin/TEST/SDGenerator_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/SDGenerator_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/SDGenerator_test.dir/SDGenerator_test_autogen/mocs_compilation.cpp.o CMakeFiles/SDGenerator_test.dir/SDGenerator_test.C.o -o ../bin/TEST/SDGenerator_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 92%] Built target SDGenerator_test
make  -f test/CMakeFiles/INIFile_test1_autogen.dir/build.make test/CMakeFiles/INIFile_test1_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/INIFile_test1_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target INIFile_test1_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/INIFile_test1_autogen.dir/build.make test/CMakeFiles/INIFile_test1_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 92%] Automatic MOC for target INIFile_test1
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/INIFile_test1_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 92%] Built target INIFile_test1_autogen
make  -f test/CMakeFiles/INIFile_test1.dir/build.make test/CMakeFiles/INIFile_test1.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/INIFile_test1.dir/DependInfo.cmake --color=
Scanning dependencies of target INIFile_test1
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/INIFile_test1.dir/build.make test/CMakeFiles/INIFile_test1.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 92%] Building CXX object test/CMakeFiles/INIFile_test1.dir/INIFile_test1_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/INIFile_test1_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/INIFile_test1.dir/INIFile_test1_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/INIFile_test1_autogen/mocs_compilation.cpp
[ 92%] Building CXX object test/CMakeFiles/INIFile_test1.dir/INIFile_test1.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/INIFile_test1_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/INIFile_test1.dir/INIFile_test1.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/INIFile_test1.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ItemCollector.h:6,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/INIFile_test1.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ItemCollector.h:6,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/INIFile_test1.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ItemCollector.h:6,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/INIFile_test1.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ItemCollector.h:6,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/INIFile_test1.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ItemCollector.h:6,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/INIFile_test1.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ItemCollector.h:6,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/INIFile_test1.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 92%] Linking CXX executable ../bin/TEST/INIFile_test1
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/INIFile_test1.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/INIFile_test1.dir/INIFile_test1_autogen/mocs_compilation.cpp.o CMakeFiles/INIFile_test1.dir/INIFile_test1.C.o -o ../bin/TEST/INIFile_test1  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 92%] Built target INIFile_test1
make  -f test/CMakeFiles/KCFFile_test_autogen.dir/build.make test/CMakeFiles/KCFFile_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/KCFFile_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target KCFFile_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/KCFFile_test_autogen.dir/build.make test/CMakeFiles/KCFFile_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 92%] Automatic MOC for target KCFFile_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/KCFFile_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 92%] Built target KCFFile_test_autogen
make  -f test/CMakeFiles/KCFFile_test.dir/build.make test/CMakeFiles/KCFFile_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/KCFFile_test.dir/DependInfo.cmake --color=
Scanning dependencies of target KCFFile_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/KCFFile_test.dir/build.make test/CMakeFiles/KCFFile_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 92%] Building CXX object test/CMakeFiles/KCFFile_test.dir/KCFFile_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/KCFFile_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/KCFFile_test.dir/KCFFile_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/KCFFile_test_autogen/mocs_compilation.cpp
[ 92%] Building CXX object test/CMakeFiles/KCFFile_test.dir/KCFFile_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/KCFFile_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/KCFFile_test.dir/KCFFile_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/KCFFile_test.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/KCFFile_test.C:14:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/KCFFile.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/KCFFile_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/KCFFile_test.C:14:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/KCFFile.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/KCFFile_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/KCFFile_test.C:14:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/KCFFile.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/KCFFile_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 92%] Linking CXX executable ../bin/TEST/KCFFile_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/KCFFile_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/KCFFile_test.dir/KCFFile_test_autogen/mocs_compilation.cpp.o CMakeFiles/KCFFile_test.dir/KCFFile_test.C.o -o ../bin/TEST/KCFFile_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 92%] Built target KCFFile_test
make  -f test/CMakeFiles/ResourceFile_test_autogen.dir/build.make test/CMakeFiles/ResourceFile_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/ResourceFile_test_autogen.dir/DependInfo.cmake --color=
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[ 92%] Automatic MOC for target ResourceFile_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/ResourceFile_test_autogen.dir/AutogenInfo.json Release
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cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/ResourceFile_test.dir/DependInfo.cmake --color=
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[ 92%] Building CXX object test/CMakeFiles/ResourceFile_test.dir/ResourceFile_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/ResourceFile_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/ResourceFile_test.dir/ResourceFile_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/ResourceFile_test_autogen/mocs_compilation.cpp
[ 92%] Building CXX object test/CMakeFiles/ResourceFile_test.dir/ResourceFile_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/ResourceFile_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/ResourceFile_test.dir/ResourceFile_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ResourceFile_test.C
[ 92%] Linking CXX executable ../bin/TEST/ResourceFile_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/ResourceFile_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/ResourceFile_test.dir/ResourceFile_test_autogen/mocs_compilation.cpp.o CMakeFiles/ResourceFile_test.dir/ResourceFile_test.C.o -o ../bin/TEST/ResourceFile_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 92%] Built target ResourceFile_test
make  -f test/CMakeFiles/SideChainPlacementProcessor_test_autogen.dir/build.make test/CMakeFiles/SideChainPlacementProcessor_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/SideChainPlacementProcessor_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target SideChainPlacementProcessor_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/SideChainPlacementProcessor_test_autogen.dir/build.make test/CMakeFiles/SideChainPlacementProcessor_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 92%] Automatic MOC for target SideChainPlacementProcessor_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/SideChainPlacementProcessor_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 92%] Built target SideChainPlacementProcessor_test_autogen
make  -f test/CMakeFiles/SideChainPlacementProcessor_test.dir/build.make test/CMakeFiles/SideChainPlacementProcessor_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/SideChainPlacementProcessor_test.dir/DependInfo.cmake --color=
Scanning dependencies of target SideChainPlacementProcessor_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/SideChainPlacementProcessor_test.dir/build.make test/CMakeFiles/SideChainPlacementProcessor_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 92%] Building CXX object test/CMakeFiles/SideChainPlacementProcessor_test.dir/SideChainPlacementProcessor_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/SideChainPlacementProcessor_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/SideChainPlacementProcessor_test.dir/SideChainPlacementProcessor_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/SideChainPlacementProcessor_test_autogen/mocs_compilation.cpp
[ 92%] Building CXX object test/CMakeFiles/SideChainPlacementProcessor_test.dir/SideChainPlacementProcessor_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/SideChainPlacementProcessor_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/SideChainPlacementProcessor_test.dir/SideChainPlacementProcessor_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/SideChainPlacementProcessor_test.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/sideChainPlacementProcessor.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/SideChainPlacementProcessor_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/sideChainPlacementProcessor.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/SideChainPlacementProcessor_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/sideChainPlacementProcessor.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/SideChainPlacementProcessor_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/sideChainPlacementProcessor.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/SideChainPlacementProcessor_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/sideChainPlacementProcessor.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/SideChainPlacementProcessor_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/sideChainPlacementProcessor.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/SideChainPlacementProcessor_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/SideChainPlacementProcessor_test.C: In function 'int main(int, char**)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/SideChainPlacementProcessor_test.C:119:11: warning: unused variable 'prot' [-Wunused-variable]
  119 |  Protein* prot = sys.getProtein(0);
      |           ^~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/SideChainPlacementProcessor_test.C:128:9: warning: unused variable 'chain3' [-Wunused-variable]
  128 |  Chain* chain3 = (sys.getProtein(0)->getChain(2));
      |         ^~~~~~
[ 92%] Linking CXX executable ../bin/TEST/SideChainPlacementProcessor_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/SideChainPlacementProcessor_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/SideChainPlacementProcessor_test.dir/SideChainPlacementProcessor_test_autogen/mocs_compilation.cpp.o CMakeFiles/SideChainPlacementProcessor_test.dir/SideChainPlacementProcessor_test.C.o -o ../bin/TEST/SideChainPlacementProcessor_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 92%] Built target SideChainPlacementProcessor_test
make  -f test/CMakeFiles/BitVector_test1_autogen.dir/build.make test/CMakeFiles/BitVector_test1_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/BitVector_test1_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target BitVector_test1_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/BitVector_test1_autogen.dir/build.make test/CMakeFiles/BitVector_test1_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 92%] Automatic MOC for target BitVector_test1
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/BitVector_test1_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 92%] Built target BitVector_test1_autogen
make  -f test/CMakeFiles/BitVector_test1.dir/build.make test/CMakeFiles/BitVector_test1.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/BitVector_test1.dir/DependInfo.cmake --color=
Scanning dependencies of target BitVector_test1
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/BitVector_test1.dir/build.make test/CMakeFiles/BitVector_test1.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 92%] Building CXX object test/CMakeFiles/BitVector_test1.dir/BitVector_test1_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/BitVector_test1_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/BitVector_test1.dir/BitVector_test1_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/BitVector_test1_autogen/mocs_compilation.cpp
[ 92%] Building CXX object test/CMakeFiles/BitVector_test1.dir/BitVector_test1.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/BitVector_test1_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/BitVector_test1.dir/BitVector_test1.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/BitVector_test1.C
[ 92%] Linking CXX executable ../bin/TEST/BitVector_test1
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/BitVector_test1.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/BitVector_test1.dir/BitVector_test1_autogen/mocs_compilation.cpp.o CMakeFiles/BitVector_test1.dir/BitVector_test1.C.o -o ../bin/TEST/BitVector_test1  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 92%] Built target BitVector_test1
make  -f test/CMakeFiles/SmartsMatcher_test_autogen.dir/build.make test/CMakeFiles/SmartsMatcher_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/SmartsMatcher_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target SmartsMatcher_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/SmartsMatcher_test_autogen.dir/build.make test/CMakeFiles/SmartsMatcher_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 92%] Automatic MOC for target SmartsMatcher_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/SmartsMatcher_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 92%] Built target SmartsMatcher_test_autogen
make  -f test/CMakeFiles/SmartsMatcher_test.dir/build.make test/CMakeFiles/SmartsMatcher_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/SmartsMatcher_test.dir/DependInfo.cmake --color=
Scanning dependencies of target SmartsMatcher_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/SmartsMatcher_test.dir/build.make test/CMakeFiles/SmartsMatcher_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 92%] Building CXX object test/CMakeFiles/SmartsMatcher_test.dir/SmartsMatcher_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/SmartsMatcher_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/SmartsMatcher_test.dir/SmartsMatcher_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/SmartsMatcher_test_autogen/mocs_compilation.cpp
[ 92%] Building CXX object test/CMakeFiles/SmartsMatcher_test.dir/SmartsMatcher_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/SmartsMatcher_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/SmartsMatcher_test.dir/SmartsMatcher_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/SmartsMatcher_test.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/SmartsMatcher_test.C:12:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/MOLFile.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/SDFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/SmartsMatcher_test.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/SmartsMatcher_test.C:12:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/MOLFile.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/SDFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/SmartsMatcher_test.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/SmartsMatcher_test.C:12:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/MOLFile.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/SDFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/SmartsMatcher_test.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 92%] Linking CXX executable ../bin/TEST/SmartsMatcher_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/SmartsMatcher_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/SmartsMatcher_test.dir/SmartsMatcher_test_autogen/mocs_compilation.cpp.o CMakeFiles/SmartsMatcher_test.dir/SmartsMatcher_test.C.o -o ../bin/TEST/SmartsMatcher_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 92%] Built target SmartsMatcher_test
make  -f test/CMakeFiles/HINFile_test_autogen.dir/build.make test/CMakeFiles/HINFile_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/HINFile_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target HINFile_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/HINFile_test_autogen.dir/build.make test/CMakeFiles/HINFile_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 92%] Automatic MOC for target HINFile_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/HINFile_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 92%] Built target HINFile_test_autogen
make  -f test/CMakeFiles/HINFile_test.dir/build.make test/CMakeFiles/HINFile_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/HINFile_test.dir/DependInfo.cmake --color=
Scanning dependencies of target HINFile_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/HINFile_test.dir/build.make test/CMakeFiles/HINFile_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 92%] Building CXX object test/CMakeFiles/HINFile_test.dir/HINFile_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/HINFile_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/HINFile_test.dir/HINFile_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/HINFile_test_autogen/mocs_compilation.cpp
[ 92%] Building CXX object test/CMakeFiles/HINFile_test.dir/HINFile_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/HINFile_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/HINFile_test.dir/HINFile_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/HINFile_test.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/HINFile_test.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/simpleBox3.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/HINFile.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/HINFile_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/HINFile_test.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/simpleBox3.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/HINFile.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/HINFile_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/HINFile_test.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/simpleBox3.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/HINFile.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/HINFile_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 92%] Linking CXX executable ../bin/TEST/HINFile_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/HINFile_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/HINFile_test.dir/HINFile_test_autogen/mocs_compilation.cpp.o CMakeFiles/HINFile_test.dir/HINFile_test.C.o -o ../bin/TEST/HINFile_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 92%] Built target HINFile_test
make  -f test/CMakeFiles/Selector_test_autogen.dir/build.make test/CMakeFiles/Selector_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/Selector_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target Selector_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/Selector_test_autogen.dir/build.make test/CMakeFiles/Selector_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 92%] Automatic MOC for target Selector_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/Selector_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 92%] Built target Selector_test_autogen
make  -f test/CMakeFiles/Selector_test.dir/build.make test/CMakeFiles/Selector_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/Selector_test.dir/DependInfo.cmake --color=
Scanning dependencies of target Selector_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/Selector_test.dir/build.make test/CMakeFiles/Selector_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 92%] Building CXX object test/CMakeFiles/Selector_test.dir/Selector_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/Selector_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Selector_test.dir/Selector_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/Selector_test_autogen/mocs_compilation.cpp
[ 92%] Building CXX object test/CMakeFiles/Selector_test.dir/Selector_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/Selector_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Selector_test.dir/Selector_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Selector_test.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/moleculeIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Selector_test.C:13:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/expressionPredicate.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/expressionTree.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/expressionParser.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/expression.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/selector.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Selector_test.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/moleculeIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Selector_test.C:13:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/expressionPredicate.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/expressionTree.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/expressionParser.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/expression.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/selector.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Selector_test.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/moleculeIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Selector_test.C:13:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/expressionPredicate.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/expressionTree.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/expressionParser.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/expression.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/selector.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Selector_test.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 92%] Linking CXX executable ../bin/TEST/Selector_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/Selector_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Selector_test.dir/Selector_test_autogen/mocs_compilation.cpp.o CMakeFiles/Selector_test.dir/Selector_test.C.o -o ../bin/TEST/Selector_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 92%] Built target Selector_test
make  -f test/CMakeFiles/DCDFile_test_autogen.dir/build.make test/CMakeFiles/DCDFile_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/DCDFile_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target DCDFile_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/DCDFile_test_autogen.dir/build.make test/CMakeFiles/DCDFile_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 92%] Automatic MOC for target DCDFile_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/DCDFile_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 92%] Built target DCDFile_test_autogen
make  -f test/CMakeFiles/DCDFile_test.dir/build.make test/CMakeFiles/DCDFile_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/DCDFile_test.dir/DependInfo.cmake --color=
Scanning dependencies of target DCDFile_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/DCDFile_test.dir/build.make test/CMakeFiles/DCDFile_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 92%] Building CXX object test/CMakeFiles/DCDFile_test.dir/DCDFile_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/DCDFile_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/DCDFile_test.dir/DCDFile_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/DCDFile_test_autogen/mocs_compilation.cpp
[ 92%] Building CXX object test/CMakeFiles/DCDFile_test.dir/DCDFile_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/DCDFile_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/DCDFile_test.dir/DCDFile_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/DCDFile_test.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/secondaryStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBdefs.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/DCDFile_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/snapShot.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/trajectoryFile.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/DCDFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/DCDFile_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/secondaryStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBdefs.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/DCDFile_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/snapShot.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/trajectoryFile.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/DCDFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/DCDFile_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/secondaryStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBdefs.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/DCDFile_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/snapShot.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/trajectoryFile.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/DCDFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/DCDFile_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 92%] Linking CXX executable ../bin/TEST/DCDFile_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/DCDFile_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/DCDFile_test.dir/DCDFile_test_autogen/mocs_compilation.cpp.o CMakeFiles/DCDFile_test.dir/DCDFile_test.C.o -o ../bin/TEST/DCDFile_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 92%] Built target DCDFile_test
make  -f test/CMakeFiles/EnergyMinimizer_test_autogen.dir/build.make test/CMakeFiles/EnergyMinimizer_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/EnergyMinimizer_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target EnergyMinimizer_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/EnergyMinimizer_test_autogen.dir/build.make test/CMakeFiles/EnergyMinimizer_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 92%] Automatic MOC for target EnergyMinimizer_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/EnergyMinimizer_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 92%] Built target EnergyMinimizer_test_autogen
make  -f test/CMakeFiles/EnergyMinimizer_test.dir/build.make test/CMakeFiles/EnergyMinimizer_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/EnergyMinimizer_test.dir/DependInfo.cmake --color=
Scanning dependencies of target EnergyMinimizer_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/EnergyMinimizer_test.dir/build.make test/CMakeFiles/EnergyMinimizer_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 92%] Building CXX object test/CMakeFiles/EnergyMinimizer_test.dir/EnergyMinimizer_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/EnergyMinimizer_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/EnergyMinimizer_test.dir/EnergyMinimizer_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/EnergyMinimizer_test_autogen/mocs_compilation.cpp
[ 92%] Building CXX object test/CMakeFiles/EnergyMinimizer_test.dir/EnergyMinimizer_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/EnergyMinimizer_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/EnergyMinimizer_test.dir/EnergyMinimizer_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/EnergyMinimizer_test.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceField.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/AMBER/amber.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/EnergyMinimizer_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MINIMIZATION/energyMinimizer.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/EnergyMinimizer_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceField.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/AMBER/amber.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/EnergyMinimizer_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MINIMIZATION/energyMinimizer.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/EnergyMinimizer_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceField.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/AMBER/amber.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/EnergyMinimizer_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MINIMIZATION/energyMinimizer.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/EnergyMinimizer_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 92%] Linking CXX executable ../bin/TEST/EnergyMinimizer_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/EnergyMinimizer_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/EnergyMinimizer_test.dir/EnergyMinimizer_test_autogen/mocs_compilation.cpp.o CMakeFiles/EnergyMinimizer_test.dir/EnergyMinimizer_test.C.o -o ../bin/TEST/EnergyMinimizer_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 92%] Built target EnergyMinimizer_test
make  -f test/CMakeFiles/PDBRecords_test_autogen.dir/build.make test/CMakeFiles/PDBRecords_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/PDBRecords_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target PDBRecords_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/PDBRecords_test_autogen.dir/build.make test/CMakeFiles/PDBRecords_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 92%] Automatic MOC for target PDBRecords_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/PDBRecords_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 92%] Built target PDBRecords_test_autogen
make  -f test/CMakeFiles/PDBRecords_test.dir/build.make test/CMakeFiles/PDBRecords_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/PDBRecords_test.dir/DependInfo.cmake --color=
Scanning dependencies of target PDBRecords_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/PDBRecords_test.dir/build.make test/CMakeFiles/PDBRecords_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 92%] Building CXX object test/CMakeFiles/PDBRecords_test.dir/PDBRecords_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/PDBRecords_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/PDBRecords_test.dir/PDBRecords_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/PDBRecords_test_autogen/mocs_compilation.cpp
[ 92%] Building CXX object test/CMakeFiles/PDBRecords_test.dir/PDBRecords_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/PDBRecords_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/PDBRecords_test.dir/PDBRecords_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/PDBRecords_test.C
[ 92%] Linking CXX executable ../bin/TEST/PDBRecords_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/PDBRecords_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/PDBRecords_test.dir/PDBRecords_test_autogen/mocs_compilation.cpp.o CMakeFiles/PDBRecords_test.dir/PDBRecords_test.C.o -o ../bin/TEST/PDBRecords_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 92%] Built target PDBRecords_test
make  -f test/CMakeFiles/SurfaceModel_test_autogen.dir/build.make test/CMakeFiles/SurfaceModel_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/SurfaceModel_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target SurfaceModel_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/SurfaceModel_test_autogen.dir/build.make test/CMakeFiles/SurfaceModel_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 92%] Automatic MOC for target SurfaceModel_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/SurfaceModel_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 92%] Built target SurfaceModel_test_autogen
make  -f test/CMakeFiles/SurfaceModel_test.dir/build.make test/CMakeFiles/SurfaceModel_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/SurfaceModel_test.dir/DependInfo.cmake --color=
Scanning dependencies of target SurfaceModel_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/SurfaceModel_test.dir/build.make test/CMakeFiles/SurfaceModel_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 92%] Building CXX object test/CMakeFiles/SurfaceModel_test.dir/SurfaceModel_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/SurfaceModel_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/SurfaceModel_test.dir/SurfaceModel_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/SurfaceModel_test_autogen/mocs_compilation.cpp
[ 92%] Building CXX object test/CMakeFiles/SurfaceModel_test.dir/SurfaceModel_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/SurfaceModel_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/SurfaceModel_test.dir/SurfaceModel_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/SurfaceModel_test.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/secondaryStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBdefs.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/SurfaceModel_test.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/SurfaceModel_test.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/secondaryStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBdefs.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/SurfaceModel_test.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/SurfaceModel_test.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/secondaryStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBdefs.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/SurfaceModel_test.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/SurfaceModel_test.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/solventExcludedSurface.h:45,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/surfaceProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/MODELS/surfaceModel.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/SurfaceModel_test.C:13:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h: In instantiation of 'BALL::Index BALL::HashGrid3<Item>::getIndex_(const BALL::HashGridBox3<Item>&) const [with Item = int; BALL::Index = int]':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:1667:20:   required from 'void BALL::HashGrid3<Item>::dump(std::ostream&, BALL::Size) const [with Item = int; std::ostream = std::basic_ostream<char>; BALL::Size = unsigned int]'
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:1625:7:   required from here
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:1726:46: warning: comparison of integer expressions of different signedness: 'int' and 'BALL::Size' {aka 'unsigned int'} [-Wsign-compare]
 1726 |   if ((&box < &box_[0]) || (&box - &box_[0]  >= getSize()))
      |                            ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~
[ 92%] Linking CXX executable ../bin/TEST/SurfaceModel_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/SurfaceModel_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/SurfaceModel_test.dir/SurfaceModel_test_autogen/mocs_compilation.cpp.o CMakeFiles/SurfaceModel_test.dir/SurfaceModel_test.C.o -o ../bin/TEST/SurfaceModel_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libVIEW.so.1.5 -lpthread -lGLEW ../lib/libBALL.so.1.5 /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 -lpython3.9 -lpthread /usr/lib/i386-linux-gnu/libQt5OpenGL.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Test.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5WebEngineWidgets.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5PrintSupport.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Widgets.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5WebEngineCore.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Positioning.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Quick.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Gui.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5QmlModels.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5WebChannel.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Qml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lGL -lGLU 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 92%] Built target SurfaceModel_test
make  -f test/CMakeFiles/CCP4File_test_autogen.dir/build.make test/CMakeFiles/CCP4File_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/CCP4File_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target CCP4File_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
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[ 93%] Automatic MOC for target CCP4File_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/CCP4File_test_autogen.dir/AutogenInfo.json Release
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make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/CCP4File_test.dir/DependInfo.cmake --color=
Scanning dependencies of target CCP4File_test
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make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 93%] Building CXX object test/CMakeFiles/CCP4File_test.dir/CCP4File_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CCP4File_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/CCP4File_test.dir/CCP4File_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CCP4File_test_autogen/mocs_compilation.cpp
[ 93%] Building CXX object test/CMakeFiles/CCP4File_test.dir/CCP4File_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CCP4File_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/CCP4File_test.dir/CCP4File_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/CCP4File_test.C
[ 93%] Linking CXX executable ../bin/TEST/CCP4File_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/CCP4File_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/CCP4File_test.dir/CCP4File_test_autogen/mocs_compilation.cpp.o CMakeFiles/CCP4File_test.dir/CCP4File_test.C.o -o ../bin/TEST/CCP4File_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
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make  -f test/CMakeFiles/PDBInfo_test_autogen.dir/build.make test/CMakeFiles/PDBInfo_test_autogen.dir/depend
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cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/PDBInfo_test_autogen.dir/DependInfo.cmake --color=
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[ 93%] Automatic MOC for target PDBInfo_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/PDBInfo_test_autogen.dir/AutogenInfo.json Release
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cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/PDBInfo_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/PDBInfo_test.dir/PDBInfo_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/PDBInfo_test_autogen/mocs_compilation.cpp
[ 93%] Building CXX object test/CMakeFiles/PDBInfo_test.dir/PDBInfo_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/PDBInfo_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/PDBInfo_test.dir/PDBInfo_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/PDBInfo_test.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/secondaryStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBdefs.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBInfo.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/PDBInfo_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBRecords.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBInfo.h:12,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/PDBInfo_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/secondaryStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBdefs.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBInfo.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/PDBInfo_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBRecords.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBInfo.h:12,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/PDBInfo_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/secondaryStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBdefs.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBInfo.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/PDBInfo_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBRecords.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBInfo.h:12,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/PDBInfo_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 93%] Linking CXX executable ../bin/TEST/PDBInfo_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/PDBInfo_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/PDBInfo_test.dir/PDBInfo_test_autogen/mocs_compilation.cpp.o CMakeFiles/PDBInfo_test.dir/PDBInfo_test.C.o -o ../bin/TEST/PDBInfo_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 93%] Built target PDBInfo_test
make  -f test/CMakeFiles/OoiEnergy_test_autogen.dir/build.make test/CMakeFiles/OoiEnergy_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/OoiEnergy_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target OoiEnergy_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/OoiEnergy_test_autogen.dir/build.make test/CMakeFiles/OoiEnergy_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 93%] Automatic MOC for target OoiEnergy_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/OoiEnergy_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 93%] Built target OoiEnergy_test_autogen
make  -f test/CMakeFiles/OoiEnergy_test.dir/build.make test/CMakeFiles/OoiEnergy_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/OoiEnergy_test.dir/DependInfo.cmake --color=
Scanning dependencies of target OoiEnergy_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/OoiEnergy_test.dir/build.make test/CMakeFiles/OoiEnergy_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 93%] Building CXX object test/CMakeFiles/OoiEnergy_test.dir/OoiEnergy_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/OoiEnergy_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/OoiEnergy_test.dir/OoiEnergy_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/OoiEnergy_test_autogen/mocs_compilation.cpp
[ 93%] Building CXX object test/CMakeFiles/OoiEnergy_test.dir/OoiEnergy_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/OoiEnergy_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/OoiEnergy_test.dir/OoiEnergy_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/OoiEnergy_test.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/secondaryStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBdefs.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/OoiEnergy_test.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/expressionPredicate.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/expressionTree.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/expressionParser.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/expression.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/ruleEvaluator.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/ruleProcessor.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/typeRuleProcessor.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SOLVATION/ooiEnergy.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/OoiEnergy_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/secondaryStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBdefs.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/OoiEnergy_test.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/expressionPredicate.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/expressionTree.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/expressionParser.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/expression.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/ruleEvaluator.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/ruleProcessor.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/typeRuleProcessor.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SOLVATION/ooiEnergy.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/OoiEnergy_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/secondaryStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBdefs.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/OoiEnergy_test.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/expressionPredicate.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/expressionTree.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/expressionParser.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/expression.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/ruleEvaluator.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/ruleProcessor.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/typeRuleProcessor.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SOLVATION/ooiEnergy.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/OoiEnergy_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 93%] Linking CXX executable ../bin/TEST/OoiEnergy_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/OoiEnergy_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/OoiEnergy_test.dir/OoiEnergy_test_autogen/mocs_compilation.cpp.o CMakeFiles/OoiEnergy_test.dir/OoiEnergy_test.C.o -o ../bin/TEST/OoiEnergy_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 93%] Built target OoiEnergy_test
make  -f test/CMakeFiles/XYZFile_test_autogen.dir/build.make test/CMakeFiles/XYZFile_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/XYZFile_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target XYZFile_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/XYZFile_test_autogen.dir/build.make test/CMakeFiles/XYZFile_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 93%] Automatic MOC for target XYZFile_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/XYZFile_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 93%] Built target XYZFile_test_autogen
make  -f test/CMakeFiles/XYZFile_test.dir/build.make test/CMakeFiles/XYZFile_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/XYZFile_test.dir/DependInfo.cmake --color=
Scanning dependencies of target XYZFile_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/XYZFile_test.dir/build.make test/CMakeFiles/XYZFile_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 93%] Building CXX object test/CMakeFiles/XYZFile_test.dir/XYZFile_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/XYZFile_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/XYZFile_test.dir/XYZFile_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/XYZFile_test_autogen/mocs_compilation.cpp
[ 93%] Building CXX object test/CMakeFiles/XYZFile_test.dir/XYZFile_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/XYZFile_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/XYZFile_test.dir/XYZFile_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/XYZFile_test.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/XYZFile_test.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/XYZFile_test.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/XYZFile_test.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/XYZFile_test.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/XYZFile_test.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/XYZFile_test.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 93%] Linking CXX executable ../bin/TEST/XYZFile_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/XYZFile_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/XYZFile_test.dir/XYZFile_test_autogen/mocs_compilation.cpp.o CMakeFiles/XYZFile_test.dir/XYZFile_test.C.o -o ../bin/TEST/XYZFile_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 93%] Built target XYZFile_test
make  -f test/CMakeFiles/AnisotropyShiftProcessor_test_autogen.dir/build.make test/CMakeFiles/AnisotropyShiftProcessor_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/AnisotropyShiftProcessor_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target AnisotropyShiftProcessor_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/AnisotropyShiftProcessor_test_autogen.dir/build.make test/CMakeFiles/AnisotropyShiftProcessor_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 93%] Automatic MOC for target AnisotropyShiftProcessor_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/AnisotropyShiftProcessor_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 93%] Built target AnisotropyShiftProcessor_test_autogen
make  -f test/CMakeFiles/AnisotropyShiftProcessor_test.dir/build.make test/CMakeFiles/AnisotropyShiftProcessor_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/AnisotropyShiftProcessor_test.dir/DependInfo.cmake --color=
Scanning dependencies of target AnisotropyShiftProcessor_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/AnisotropyShiftProcessor_test.dir/build.make test/CMakeFiles/AnisotropyShiftProcessor_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 93%] Building CXX object test/CMakeFiles/AnisotropyShiftProcessor_test.dir/AnisotropyShiftProcessor_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/AnisotropyShiftProcessor_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/AnisotropyShiftProcessor_test.dir/AnisotropyShiftProcessor_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/AnisotropyShiftProcessor_test_autogen/mocs_compilation.cpp
[ 93%] Building CXX object test/CMakeFiles/AnisotropyShiftProcessor_test.dir/AnisotropyShiftProcessor_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/AnisotropyShiftProcessor_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/AnisotropyShiftProcessor_test.dir/AnisotropyShiftProcessor_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AnisotropyShiftProcessor_test.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/anisotropyShiftProcessor.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AnisotropyShiftProcessor_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/anisotropyShiftProcessor.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AnisotropyShiftProcessor_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/anisotropyShiftProcessor.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AnisotropyShiftProcessor_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/anisotropyShiftProcessor.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AnisotropyShiftProcessor_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/anisotropyShiftProcessor.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AnisotropyShiftProcessor_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/anisotropyShiftProcessor.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AnisotropyShiftProcessor_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 93%] Linking CXX executable ../bin/TEST/AnisotropyShiftProcessor_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/AnisotropyShiftProcessor_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/AnisotropyShiftProcessor_test.dir/AnisotropyShiftProcessor_test_autogen/mocs_compilation.cpp.o CMakeFiles/AnisotropyShiftProcessor_test.dir/AnisotropyShiftProcessor_test.C.o -o ../bin/TEST/AnisotropyShiftProcessor_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 93%] Built target AnisotropyShiftProcessor_test
make  -f test/CMakeFiles/ComposedEnergyProcessor_test_autogen.dir/build.make test/CMakeFiles/ComposedEnergyProcessor_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/ComposedEnergyProcessor_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target ComposedEnergyProcessor_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/ComposedEnergyProcessor_test_autogen.dir/build.make test/CMakeFiles/ComposedEnergyProcessor_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 93%] Automatic MOC for target ComposedEnergyProcessor_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/ComposedEnergyProcessor_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 93%] Built target ComposedEnergyProcessor_test_autogen
make  -f test/CMakeFiles/ComposedEnergyProcessor_test.dir/build.make test/CMakeFiles/ComposedEnergyProcessor_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/ComposedEnergyProcessor_test.dir/DependInfo.cmake --color=
Scanning dependencies of target ComposedEnergyProcessor_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/ComposedEnergyProcessor_test.dir/build.make test/CMakeFiles/ComposedEnergyProcessor_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 93%] Building CXX object test/CMakeFiles/ComposedEnergyProcessor_test.dir/ComposedEnergyProcessor_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/ComposedEnergyProcessor_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/ComposedEnergyProcessor_test.dir/ComposedEnergyProcessor_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/ComposedEnergyProcessor_test_autogen/mocs_compilation.cpp
[ 93%] Building CXX object test/CMakeFiles/ComposedEnergyProcessor_test.dir/ComposedEnergyProcessor_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/ComposedEnergyProcessor_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/ComposedEnergyProcessor_test.dir/ComposedEnergyProcessor_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ComposedEnergyProcessor_test.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/ENERGY/energyProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/ENERGY/composedEnergyProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ComposedEnergyProcessor_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/ENERGY/energyProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/ENERGY/composedEnergyProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ComposedEnergyProcessor_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/ENERGY/energyProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/ENERGY/composedEnergyProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ComposedEnergyProcessor_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/ENERGY/energyProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/ENERGY/composedEnergyProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ComposedEnergyProcessor_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/ENERGY/energyProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/ENERGY/composedEnergyProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ComposedEnergyProcessor_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/ENERGY/energyProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/ENERGY/composedEnergyProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ComposedEnergyProcessor_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 93%] Linking CXX executable ../bin/TEST/ComposedEnergyProcessor_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/ComposedEnergyProcessor_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/ComposedEnergyProcessor_test.dir/ComposedEnergyProcessor_test_autogen/mocs_compilation.cpp.o CMakeFiles/ComposedEnergyProcessor_test.dir/ComposedEnergyProcessor_test.C.o -o ../bin/TEST/ComposedEnergyProcessor_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 93%] Built target ComposedEnergyProcessor_test
make  -f test/CMakeFiles/EnergyProcessor_test_autogen.dir/build.make test/CMakeFiles/EnergyProcessor_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/EnergyProcessor_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target EnergyProcessor_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/EnergyProcessor_test_autogen.dir/build.make test/CMakeFiles/EnergyProcessor_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 93%] Automatic MOC for target EnergyProcessor_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/EnergyProcessor_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 93%] Built target EnergyProcessor_test_autogen
make  -f test/CMakeFiles/EnergyProcessor_test.dir/build.make test/CMakeFiles/EnergyProcessor_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/EnergyProcessor_test.dir/DependInfo.cmake --color=
Scanning dependencies of target EnergyProcessor_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/EnergyProcessor_test.dir/build.make test/CMakeFiles/EnergyProcessor_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 93%] Building CXX object test/CMakeFiles/EnergyProcessor_test.dir/EnergyProcessor_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/EnergyProcessor_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/EnergyProcessor_test.dir/EnergyProcessor_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/EnergyProcessor_test_autogen/mocs_compilation.cpp
[ 93%] Building CXX object test/CMakeFiles/EnergyProcessor_test.dir/EnergyProcessor_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/EnergyProcessor_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/EnergyProcessor_test.dir/EnergyProcessor_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/EnergyProcessor_test.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/EnergyProcessor_test.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/simpleBox3.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/HINFile.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/EnergyProcessor_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/EnergyProcessor_test.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/simpleBox3.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/HINFile.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/EnergyProcessor_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/EnergyProcessor_test.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/simpleBox3.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/HINFile.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/EnergyProcessor_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 93%] Linking CXX executable ../bin/TEST/EnergyProcessor_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/EnergyProcessor_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/EnergyProcessor_test.dir/EnergyProcessor_test_autogen/mocs_compilation.cpp.o CMakeFiles/EnergyProcessor_test.dir/EnergyProcessor_test.C.o -o ../bin/TEST/EnergyProcessor_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 93%] Built target EnergyProcessor_test
make  -f test/CMakeFiles/AssignBondOrderProcessor_test1_autogen.dir/build.make test/CMakeFiles/AssignBondOrderProcessor_test1_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/AssignBondOrderProcessor_test1_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target AssignBondOrderProcessor_test1_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/AssignBondOrderProcessor_test1_autogen.dir/build.make test/CMakeFiles/AssignBondOrderProcessor_test1_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 93%] Automatic MOC for target AssignBondOrderProcessor_test1
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/AssignBondOrderProcessor_test1_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 93%] Built target AssignBondOrderProcessor_test1_autogen
make  -f test/CMakeFiles/AssignBondOrderProcessor_test1.dir/build.make test/CMakeFiles/AssignBondOrderProcessor_test1.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/AssignBondOrderProcessor_test1.dir/DependInfo.cmake --color=
Scanning dependencies of target AssignBondOrderProcessor_test1
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/AssignBondOrderProcessor_test1.dir/build.make test/CMakeFiles/AssignBondOrderProcessor_test1.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 93%] Building CXX object test/CMakeFiles/AssignBondOrderProcessor_test1.dir/AssignBondOrderProcessor_test1_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/AssignBondOrderProcessor_test1_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/AssignBondOrderProcessor_test1.dir/AssignBondOrderProcessor_test1_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/AssignBondOrderProcessor_test1_autogen/mocs_compilation.cpp
[ 93%] Building CXX object test/CMakeFiles/AssignBondOrderProcessor_test1.dir/AssignBondOrderProcessor_test1.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/AssignBondOrderProcessor_test1_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/AssignBondOrderProcessor_test1.dir/AssignBondOrderProcessor_test1.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AssignBondOrderProcessor_test1.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/assignBondOrderProcessor.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AssignBondOrderProcessor_test1.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/assignBondOrderProcessor.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AssignBondOrderProcessor_test1.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/assignBondOrderProcessor.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AssignBondOrderProcessor_test1.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/assignBondOrderProcessor.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AssignBondOrderProcessor_test1.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/assignBondOrderProcessor.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AssignBondOrderProcessor_test1.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/assignBondOrderProcessor.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AssignBondOrderProcessor_test1.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AssignBondOrderProcessor_test1.C:17:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AssignBondOrderProcessor_test1.C: In function 'void storeBondOrders(BALL::System&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:108:49: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  108 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AssignBondOrderProcessor_test1.C:29:2: note: in expansion of macro 'BALL_FOREACH_BOND'
   29 |  BALL_FOREACH_BOND(sys, a_it, b_it)
      |  ^~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/assignBondOrderProcessor.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AssignBondOrderProcessor_test1.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AssignBondOrderProcessor_test1.C:17:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AssignBondOrderProcessor_test1.C: In function 'void storeBondOrders(BALL::System&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:108:49: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' first required here
  108 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AssignBondOrderProcessor_test1.C:29:2: note: in expansion of macro 'BALL_FOREACH_BOND'
   29 |  BALL_FOREACH_BOND(sys, a_it, b_it)
      |  ^~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:110:51: warning: implicitly-declared 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  110 |   for (bond_iterator = (*atom_iterator).beginBond(); \
      |                                                   ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AssignBondOrderProcessor_test1.C:29:2: note: in expansion of macro 'BALL_FOREACH_BOND'
   29 |  BALL_FOREACH_BOND(sys, a_it, b_it)
      |  ^~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/assignBondOrderProcessor.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AssignBondOrderProcessor_test1.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:437:15: note: because 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::RandomAccessIterator<Container, DataType, Position, Traits>::RandomAccessIterator(const BALL::RandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
  437 |   BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:413:8: warning: implicitly-declared 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  413 |  class RandomAccessIterator
      |        ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:47:15: note: because 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   47 |   BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:24:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   24 |  class ConstRandomAccessIterator
      |        ^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/assignBondOrderProcessor.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AssignBondOrderProcessor_test1.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/assignBondOrderProcessor.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AssignBondOrderProcessor_test1.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:413:8: note: synthesized method 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' first required here
  413 |  class RandomAccessIterator
      |        ^~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AssignBondOrderProcessor_test1.C:17:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AssignBondOrderProcessor_test1.C: In function 'void storeBondOrders(BALL::System&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:110:51: note: synthesized method 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' first required here
  110 |   for (bond_iterator = (*atom_iterator).beginBond(); \
      |                                                   ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AssignBondOrderProcessor_test1.C:29:2: note: in expansion of macro 'BALL_FOREACH_BOND'
   29 |  BALL_FOREACH_BOND(sys, a_it, b_it)
      |  ^~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AssignBondOrderProcessor_test1.C: In function 'bool compareBondOrder(BALL::System&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:108:49: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  108 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AssignBondOrderProcessor_test1.C:42:2: note: in expansion of macro 'BALL_FOREACH_BOND'
   42 |  BALL_FOREACH_BOND(sys, a_it, b_it)
      |  ^~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/assignBondOrderProcessor.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AssignBondOrderProcessor_test1.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AssignBondOrderProcessor_test1.C:17:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:110:51: warning: implicitly-declared 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  110 |   for (bond_iterator = (*atom_iterator).beginBond(); \
      |                                                   ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AssignBondOrderProcessor_test1.C:42:2: note: in expansion of macro 'BALL_FOREACH_BOND'
   42 |  BALL_FOREACH_BOND(sys, a_it, b_it)
      |  ^~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/assignBondOrderProcessor.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AssignBondOrderProcessor_test1.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:437:15: note: because 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::RandomAccessIterator<Container, DataType, Position, Traits>::RandomAccessIterator(const BALL::RandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
  437 |   BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~
[ 93%] Linking CXX executable ../bin/TEST/AssignBondOrderProcessor_test1
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/AssignBondOrderProcessor_test1.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/AssignBondOrderProcessor_test1.dir/AssignBondOrderProcessor_test1_autogen/mocs_compilation.cpp.o CMakeFiles/AssignBondOrderProcessor_test1.dir/AssignBondOrderProcessor_test1.C.o -o ../bin/TEST/AssignBondOrderProcessor_test1  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 93%] Built target AssignBondOrderProcessor_test1
make  -f test/CMakeFiles/RegularData3D_test2_autogen.dir/build.make test/CMakeFiles/RegularData3D_test2_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/RegularData3D_test2_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target RegularData3D_test2_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/RegularData3D_test2_autogen.dir/build.make test/CMakeFiles/RegularData3D_test2_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 93%] Automatic MOC for target RegularData3D_test2
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/RegularData3D_test2_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 93%] Built target RegularData3D_test2_autogen
make  -f test/CMakeFiles/RegularData3D_test2.dir/build.make test/CMakeFiles/RegularData3D_test2.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/RegularData3D_test2.dir/DependInfo.cmake --color=
Scanning dependencies of target RegularData3D_test2
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/RegularData3D_test2.dir/build.make test/CMakeFiles/RegularData3D_test2.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 93%] Building CXX object test/CMakeFiles/RegularData3D_test2.dir/RegularData3D_test2_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/RegularData3D_test2_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/RegularData3D_test2.dir/RegularData3D_test2_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/RegularData3D_test2_autogen/mocs_compilation.cpp
[ 93%] Building CXX object test/CMakeFiles/RegularData3D_test2.dir/RegularData3D_test2.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/RegularData3D_test2_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/RegularData3D_test2.dir/RegularData3D_test2.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/RegularData3D_test2.C
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/RegularData3D_test2.C: In function 'int main(int, char**)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/RegularData3D_test2.C:18:16: warning: unused variable 'grid' [-Wunused-variable]
   18 | RegularData3D* grid;
      |                ^~~~
[ 93%] Linking CXX executable ../bin/TEST/RegularData3D_test2
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/RegularData3D_test2.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/RegularData3D_test2.dir/RegularData3D_test2_autogen/mocs_compilation.cpp.o CMakeFiles/RegularData3D_test2.dir/RegularData3D_test2.C.o -o ../bin/TEST/RegularData3D_test2  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 93%] Built target RegularData3D_test2
make  -f test/CMakeFiles/AddHydrogenProcessor_test_autogen.dir/build.make test/CMakeFiles/AddHydrogenProcessor_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/AddHydrogenProcessor_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target AddHydrogenProcessor_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/AddHydrogenProcessor_test_autogen.dir/build.make test/CMakeFiles/AddHydrogenProcessor_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 93%] Automatic MOC for target AddHydrogenProcessor_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/AddHydrogenProcessor_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 93%] Built target AddHydrogenProcessor_test_autogen
make  -f test/CMakeFiles/AddHydrogenProcessor_test.dir/build.make test/CMakeFiles/AddHydrogenProcessor_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/AddHydrogenProcessor_test.dir/DependInfo.cmake --color=
Scanning dependencies of target AddHydrogenProcessor_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/AddHydrogenProcessor_test.dir/build.make test/CMakeFiles/AddHydrogenProcessor_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 93%] Building CXX object test/CMakeFiles/AddHydrogenProcessor_test.dir/AddHydrogenProcessor_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/AddHydrogenProcessor_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/AddHydrogenProcessor_test.dir/AddHydrogenProcessor_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/AddHydrogenProcessor_test_autogen/mocs_compilation.cpp
[ 93%] Building CXX object test/CMakeFiles/AddHydrogenProcessor_test.dir/AddHydrogenProcessor_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/AddHydrogenProcessor_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/AddHydrogenProcessor_test.dir/AddHydrogenProcessor_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AddHydrogenProcessor_test.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AddHydrogenProcessor_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AddHydrogenProcessor_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AddHydrogenProcessor_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AddHydrogenProcessor_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AddHydrogenProcessor_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AddHydrogenProcessor_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 93%] Linking CXX executable ../bin/TEST/AddHydrogenProcessor_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/AddHydrogenProcessor_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/AddHydrogenProcessor_test.dir/AddHydrogenProcessor_test_autogen/mocs_compilation.cpp.o CMakeFiles/AddHydrogenProcessor_test.dir/AddHydrogenProcessor_test.C.o -o ../bin/TEST/AddHydrogenProcessor_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 93%] Built target AddHydrogenProcessor_test
make  -f test/CMakeFiles/Circle3_test_autogen.dir/build.make test/CMakeFiles/Circle3_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/Circle3_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target Circle3_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/Circle3_test_autogen.dir/build.make test/CMakeFiles/Circle3_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 93%] Automatic MOC for target Circle3_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/Circle3_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 93%] Built target Circle3_test_autogen
make  -f test/CMakeFiles/Circle3_test.dir/build.make test/CMakeFiles/Circle3_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/Circle3_test.dir/DependInfo.cmake --color=
Scanning dependencies of target Circle3_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/Circle3_test.dir/build.make test/CMakeFiles/Circle3_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 93%] Building CXX object test/CMakeFiles/Circle3_test.dir/Circle3_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/Circle3_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Circle3_test.dir/Circle3_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/Circle3_test_autogen/mocs_compilation.cpp
[ 93%] Building CXX object test/CMakeFiles/Circle3_test.dir/Circle3_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/Circle3_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Circle3_test.dir/Circle3_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Circle3_test.C
[ 93%] Linking CXX executable ../bin/TEST/Circle3_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/Circle3_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Circle3_test.dir/Circle3_test_autogen/mocs_compilation.cpp.o CMakeFiles/Circle3_test.dir/Circle3_test.C.o -o ../bin/TEST/Circle3_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 93%] Built target Circle3_test
make  -f test/CMakeFiles/EnumeratorIndex_test_autogen.dir/build.make test/CMakeFiles/EnumeratorIndex_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/EnumeratorIndex_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target EnumeratorIndex_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/EnumeratorIndex_test_autogen.dir/build.make test/CMakeFiles/EnumeratorIndex_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 93%] Automatic MOC for target EnumeratorIndex_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/EnumeratorIndex_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 93%] Built target EnumeratorIndex_test_autogen
make  -f test/CMakeFiles/EnumeratorIndex_test.dir/build.make test/CMakeFiles/EnumeratorIndex_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/EnumeratorIndex_test.dir/DependInfo.cmake --color=
Scanning dependencies of target EnumeratorIndex_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/EnumeratorIndex_test.dir/build.make test/CMakeFiles/EnumeratorIndex_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 93%] Building CXX object test/CMakeFiles/EnumeratorIndex_test.dir/EnumeratorIndex_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/EnumeratorIndex_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/EnumeratorIndex_test.dir/EnumeratorIndex_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/EnumeratorIndex_test_autogen/mocs_compilation.cpp
[ 93%] Building CXX object test/CMakeFiles/EnumeratorIndex_test.dir/EnumeratorIndex_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/EnumeratorIndex_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/EnumeratorIndex_test.dir/EnumeratorIndex_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/EnumeratorIndex_test.C
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/EnumeratorIndex_test.C: In function 'int main(int, char**)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/EnumeratorIndex_test.C:222:24: warning: implicitly-declared 'BALL::EnumeratorIndex::EnumeratorIndex(const BALL::EnumeratorIndex&)' is deprecated [-Wdeprecated-copy]
  222 |  EnumeratorIndex ei2(ei);
      |                        ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/EnumeratorIndex_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/enumerator.h:91:26: note: because 'BALL::EnumeratorIndex' has user-provided 'const BALL::EnumeratorIndex& BALL::EnumeratorIndex::operator=(const BALL::EnumeratorIndex&)'
   91 |   const EnumeratorIndex& operator = (const EnumeratorIndex& rhs);
      |                          ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/EnumeratorIndex_test.C:280:24: warning: implicitly-declared 'BALL::EnumeratorIndex::EnumeratorIndex(const BALL::EnumeratorIndex&)' is deprecated [-Wdeprecated-copy]
  280 |  EnumeratorIndex ei2(ei);
      |                        ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/EnumeratorIndex_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/enumerator.h:91:26: note: because 'BALL::EnumeratorIndex' has user-provided 'const BALL::EnumeratorIndex& BALL::EnumeratorIndex::operator=(const BALL::EnumeratorIndex&)'
   91 |   const EnumeratorIndex& operator = (const EnumeratorIndex& rhs);
      |                          ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/EnumeratorIndex_test.C:336:28: warning: implicitly-declared 'BALL::EnumeratorIndex::EnumeratorIndex(const BALL::EnumeratorIndex&)' is deprecated [-Wdeprecated-copy]
  336 | EnumeratorIndex ei_equal(ei);
      |                            ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/EnumeratorIndex_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/enumerator.h:91:26: note: because 'BALL::EnumeratorIndex' has user-provided 'const BALL::EnumeratorIndex& BALL::EnumeratorIndex::operator=(const BALL::EnumeratorIndex&)'
   91 |   const EnumeratorIndex& operator = (const EnumeratorIndex& rhs);
      |                          ^~~~~~~~
[ 93%] Linking CXX executable ../bin/TEST/EnumeratorIndex_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/EnumeratorIndex_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/EnumeratorIndex_test.dir/EnumeratorIndex_test_autogen/mocs_compilation.cpp.o CMakeFiles/EnumeratorIndex_test.dir/EnumeratorIndex_test.C.o -o ../bin/TEST/EnumeratorIndex_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 93%] Built target EnumeratorIndex_test
make  -f test/CMakeFiles/AnalyticalSES_test_autogen.dir/build.make test/CMakeFiles/AnalyticalSES_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/AnalyticalSES_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target AnalyticalSES_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/AnalyticalSES_test_autogen.dir/build.make test/CMakeFiles/AnalyticalSES_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 93%] Automatic MOC for target AnalyticalSES_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/AnalyticalSES_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 93%] Built target AnalyticalSES_test_autogen
make  -f test/CMakeFiles/AnalyticalSES_test.dir/build.make test/CMakeFiles/AnalyticalSES_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/AnalyticalSES_test.dir/DependInfo.cmake --color=
Scanning dependencies of target AnalyticalSES_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/AnalyticalSES_test.dir/build.make test/CMakeFiles/AnalyticalSES_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 93%] Building CXX object test/CMakeFiles/AnalyticalSES_test.dir/AnalyticalSES_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/AnalyticalSES_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/AnalyticalSES_test.dir/AnalyticalSES_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/AnalyticalSES_test_autogen/mocs_compilation.cpp
[ 93%] Building CXX object test/CMakeFiles/AnalyticalSES_test.dir/AnalyticalSES_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/AnalyticalSES_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/AnalyticalSES_test.dir/AnalyticalSES_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AnalyticalSES_test.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AnalyticalSES_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AnalyticalSES_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AnalyticalSES_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AnalyticalSES_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AnalyticalSES_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/AnalyticalSES_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 93%] Linking CXX executable ../bin/TEST/AnalyticalSES_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/AnalyticalSES_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/AnalyticalSES_test.dir/AnalyticalSES_test_autogen/mocs_compilation.cpp.o CMakeFiles/AnalyticalSES_test.dir/AnalyticalSES_test.C.o -o ../bin/TEST/AnalyticalSES_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 93%] Built target AnalyticalSES_test
make  -f test/CMakeFiles/DisulfidBondProcessor_test_autogen.dir/build.make test/CMakeFiles/DisulfidBondProcessor_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/DisulfidBondProcessor_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target DisulfidBondProcessor_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/DisulfidBondProcessor_test_autogen.dir/build.make test/CMakeFiles/DisulfidBondProcessor_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 93%] Automatic MOC for target DisulfidBondProcessor_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/DisulfidBondProcessor_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 93%] Built target DisulfidBondProcessor_test_autogen
make  -f test/CMakeFiles/DisulfidBondProcessor_test.dir/build.make test/CMakeFiles/DisulfidBondProcessor_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/DisulfidBondProcessor_test.dir/DependInfo.cmake --color=
Scanning dependencies of target DisulfidBondProcessor_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/DisulfidBondProcessor_test.dir/build.make test/CMakeFiles/DisulfidBondProcessor_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 93%] Building CXX object test/CMakeFiles/DisulfidBondProcessor_test.dir/DisulfidBondProcessor_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/DisulfidBondProcessor_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/DisulfidBondProcessor_test.dir/DisulfidBondProcessor_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/DisulfidBondProcessor_test_autogen/mocs_compilation.cpp
[ 93%] Building CXX object test/CMakeFiles/DisulfidBondProcessor_test.dir/DisulfidBondProcessor_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/DisulfidBondProcessor_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/DisulfidBondProcessor_test.dir/DisulfidBondProcessor_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/DisulfidBondProcessor_test.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/disulfidBondProcessor.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/DisulfidBondProcessor_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/disulfidBondProcessor.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/DisulfidBondProcessor_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/disulfidBondProcessor.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/DisulfidBondProcessor_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/disulfidBondProcessor.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/DisulfidBondProcessor_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/disulfidBondProcessor.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/DisulfidBondProcessor_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/disulfidBondProcessor.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/DisulfidBondProcessor_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 93%] Linking CXX executable ../bin/TEST/DisulfidBondProcessor_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/DisulfidBondProcessor_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/DisulfidBondProcessor_test.dir/DisulfidBondProcessor_test_autogen/mocs_compilation.cpp.o CMakeFiles/DisulfidBondProcessor_test.dir/DisulfidBondProcessor_test.C.o -o ../bin/TEST/DisulfidBondProcessor_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 93%] Built target DisulfidBondProcessor_test
make  -f test/CMakeFiles/GeometricProperties_test_autogen.dir/build.make test/CMakeFiles/GeometricProperties_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/GeometricProperties_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target GeometricProperties_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/GeometricProperties_test_autogen.dir/build.make test/CMakeFiles/GeometricProperties_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 93%] Automatic MOC for target GeometricProperties_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/GeometricProperties_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 93%] Built target GeometricProperties_test_autogen
make  -f test/CMakeFiles/GeometricProperties_test.dir/build.make test/CMakeFiles/GeometricProperties_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/GeometricProperties_test.dir/DependInfo.cmake --color=
Scanning dependencies of target GeometricProperties_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/GeometricProperties_test.dir/build.make test/CMakeFiles/GeometricProperties_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 93%] Building CXX object test/CMakeFiles/GeometricProperties_test.dir/GeometricProperties_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/GeometricProperties_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/GeometricProperties_test.dir/GeometricProperties_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/GeometricProperties_test_autogen/mocs_compilation.cpp
[ 93%] Building CXX object test/CMakeFiles/GeometricProperties_test.dir/GeometricProperties_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/GeometricProperties_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/GeometricProperties_test.dir/GeometricProperties_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/GeometricProperties_test.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/geometricProperties.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/GeometricProperties_test.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/geometricProperties.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/GeometricProperties_test.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/geometricProperties.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/GeometricProperties_test.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/geometricProperties.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/GeometricProperties_test.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/geometricProperties.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/GeometricProperties_test.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/geometricProperties.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/GeometricProperties_test.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 93%] Linking CXX executable ../bin/TEST/GeometricProperties_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/GeometricProperties_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/GeometricProperties_test.dir/GeometricProperties_test_autogen/mocs_compilation.cpp.o CMakeFiles/GeometricProperties_test.dir/GeometricProperties_test.C.o -o ../bin/TEST/GeometricProperties_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 93%] Built target GeometricProperties_test
make  -f test/CMakeFiles/SimpleMolecularGraph_test_autogen.dir/build.make test/CMakeFiles/SimpleMolecularGraph_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/SimpleMolecularGraph_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target SimpleMolecularGraph_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/SimpleMolecularGraph_test_autogen.dir/build.make test/CMakeFiles/SimpleMolecularGraph_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 93%] Automatic MOC for target SimpleMolecularGraph_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/SimpleMolecularGraph_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 93%] Built target SimpleMolecularGraph_test_autogen
make  -f test/CMakeFiles/SimpleMolecularGraph_test.dir/build.make test/CMakeFiles/SimpleMolecularGraph_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/SimpleMolecularGraph_test.dir/DependInfo.cmake --color=
Scanning dependencies of target SimpleMolecularGraph_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/SimpleMolecularGraph_test.dir/build.make test/CMakeFiles/SimpleMolecularGraph_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 93%] Building CXX object test/CMakeFiles/SimpleMolecularGraph_test.dir/SimpleMolecularGraph_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/SimpleMolecularGraph_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/SimpleMolecularGraph_test.dir/SimpleMolecularGraph_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/SimpleMolecularGraph_test_autogen/mocs_compilation.cpp
[ 93%] Building CXX object test/CMakeFiles/SimpleMolecularGraph_test.dir/SimpleMolecularGraph_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/SimpleMolecularGraph_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/SimpleMolecularGraph_test.dir/SimpleMolecularGraph_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/SimpleMolecularGraph_test.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/simpleMolecularGraph.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/SimpleMolecularGraph_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/simpleMolecularGraph.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/SimpleMolecularGraph_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/simpleMolecularGraph.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/SimpleMolecularGraph_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/simpleMolecularGraph.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/SimpleMolecularGraph_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/simpleMolecularGraph.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/SimpleMolecularGraph_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/simpleMolecularGraph.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/SimpleMolecularGraph_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/SimpleMolecularGraph_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/simpleMolecularGraph.h: In instantiation of 'BALL::TSimpleMolecularGraph<Node, Edge>::TSimpleMolecularGraph(const BALL::Molecule&) [with Node = int; Edge = int]':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/SimpleMolecularGraph_test.C:55:27:   required from here
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/simpleMolecularGraph.h:228:11: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  228 |   for (ai = molecule.beginAtom(); +ai; ++ai)
      |        ~~~^~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/simpleMolecularGraph.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/SimpleMolecularGraph_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/SimpleMolecularGraph_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/simpleMolecularGraph.h:230:12: warning: implicitly-declared 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  230 |    for (bi = ai->beginBond(); +bi; ++bi)
      |         ~~~^~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/simpleMolecularGraph.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/SimpleMolecularGraph_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:47:15: note: because 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   47 |   BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:24:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   24 |  class ConstRandomAccessIterator
      |        ^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/simpleMolecularGraph.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/SimpleMolecularGraph_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/SimpleMolecularGraph_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/simpleMolecularGraph.h:230:12: note: synthesized method 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' first required here
  230 |    for (bi = ai->beginBond(); +bi; ++bi)
      |         ~~~^~~~~~~~~~~~~~~~~
[ 93%] Linking CXX executable ../bin/TEST/SimpleMolecularGraph_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/SimpleMolecularGraph_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/SimpleMolecularGraph_test.dir/SimpleMolecularGraph_test_autogen/mocs_compilation.cpp.o CMakeFiles/SimpleMolecularGraph_test.dir/SimpleMolecularGraph_test.C.o -o ../bin/TEST/SimpleMolecularGraph_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
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cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/NumericalSAS_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target NumericalSAS_test_autogen
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cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/NumericalSAS_test_autogen.dir/AutogenInfo.json Release
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make  -f test/CMakeFiles/NumericalSAS_test.dir/build.make test/CMakeFiles/NumericalSAS_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/NumericalSAS_test.dir/DependInfo.cmake --color=
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make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 93%] Building CXX object test/CMakeFiles/NumericalSAS_test.dir/NumericalSAS_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/NumericalSAS_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/NumericalSAS_test.dir/NumericalSAS_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/NumericalSAS_test_autogen/mocs_compilation.cpp
[ 93%] Building CXX object test/CMakeFiles/NumericalSAS_test.dir/NumericalSAS_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/NumericalSAS_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/NumericalSAS_test.dir/NumericalSAS_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/NumericalSAS_test.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/NumericalSAS_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/numericalSAS.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/NumericalSAS_test.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/NumericalSAS_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/numericalSAS.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/NumericalSAS_test.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/NumericalSAS_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/numericalSAS.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/NumericalSAS_test.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 93%] Linking CXX executable ../bin/TEST/NumericalSAS_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/NumericalSAS_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/NumericalSAS_test.dir/NumericalSAS_test_autogen/mocs_compilation.cpp.o CMakeFiles/NumericalSAS_test.dir/NumericalSAS_test.C.o -o ../bin/TEST/NumericalSAS_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 93%] Built target NumericalSAS_test
make  -f test/CMakeFiles/RegularData1D_test2_autogen.dir/build.make test/CMakeFiles/RegularData1D_test2_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/RegularData1D_test2_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target RegularData1D_test2_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/RegularData1D_test2_autogen.dir/build.make test/CMakeFiles/RegularData1D_test2_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 93%] Automatic MOC for target RegularData1D_test2
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/RegularData1D_test2_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 93%] Built target RegularData1D_test2_autogen
make  -f test/CMakeFiles/RegularData1D_test2.dir/build.make test/CMakeFiles/RegularData1D_test2.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/RegularData1D_test2.dir/DependInfo.cmake --color=
Scanning dependencies of target RegularData1D_test2
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/RegularData1D_test2.dir/build.make test/CMakeFiles/RegularData1D_test2.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 93%] Building CXX object test/CMakeFiles/RegularData1D_test2.dir/RegularData1D_test2_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/RegularData1D_test2_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/RegularData1D_test2.dir/RegularData1D_test2_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/RegularData1D_test2_autogen/mocs_compilation.cpp
[ 93%] Building CXX object test/CMakeFiles/RegularData1D_test2.dir/RegularData1D_test2.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/RegularData1D_test2_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/RegularData1D_test2.dir/RegularData1D_test2.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/RegularData1D_test2.C
[ 93%] Linking CXX executable ../bin/TEST/RegularData1D_test2
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/RegularData1D_test2.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/RegularData1D_test2.dir/RegularData1D_test2_autogen/mocs_compilation.cpp.o CMakeFiles/RegularData1D_test2.dir/RegularData1D_test2.C.o -o ../bin/TEST/RegularData1D_test2  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 93%] Built target RegularData1D_test2
make  -f test/CMakeFiles/String_test7_autogen.dir/build.make test/CMakeFiles/String_test7_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/String_test7_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target String_test7_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/String_test7_autogen.dir/build.make test/CMakeFiles/String_test7_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 93%] Automatic MOC for target String_test7
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/String_test7_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 93%] Built target String_test7_autogen
make  -f test/CMakeFiles/String_test7.dir/build.make test/CMakeFiles/String_test7.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/String_test7.dir/DependInfo.cmake --color=
Scanning dependencies of target String_test7
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/String_test7.dir/build.make test/CMakeFiles/String_test7.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 93%] Building CXX object test/CMakeFiles/String_test7.dir/String_test7_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/String_test7_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/String_test7.dir/String_test7_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/String_test7_autogen/mocs_compilation.cpp
[ 93%] Building CXX object test/CMakeFiles/String_test7.dir/String_test7.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/String_test7_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/String_test7.dir/String_test7.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/String_test7.C
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/String_test7.C: In function 'int main(int, char**)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/String_test7.C:22:9: warning: unused variable 's2' [-Wunused-variable]
   22 | String* s2;
      |         ^~
[ 93%] Linking CXX executable ../bin/TEST/String_test7
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/String_test7.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/String_test7.dir/String_test7_autogen/mocs_compilation.cpp.o CMakeFiles/String_test7.dir/String_test7.C.o -o ../bin/TEST/String_test7  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 93%] Built target String_test7
make  -f test/CMakeFiles/RadialDistributionFunction_test_autogen.dir/build.make test/CMakeFiles/RadialDistributionFunction_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/RadialDistributionFunction_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target RadialDistributionFunction_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/RadialDistributionFunction_test_autogen.dir/build.make test/CMakeFiles/RadialDistributionFunction_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 93%] Automatic MOC for target RadialDistributionFunction_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/RadialDistributionFunction_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 93%] Built target RadialDistributionFunction_test_autogen
make  -f test/CMakeFiles/RadialDistributionFunction_test.dir/build.make test/CMakeFiles/RadialDistributionFunction_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/RadialDistributionFunction_test.dir/DependInfo.cmake --color=
Scanning dependencies of target RadialDistributionFunction_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/RadialDistributionFunction_test.dir/build.make test/CMakeFiles/RadialDistributionFunction_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 93%] Building CXX object test/CMakeFiles/RadialDistributionFunction_test.dir/RadialDistributionFunction_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/RadialDistributionFunction_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/RadialDistributionFunction_test.dir/RadialDistributionFunction_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/RadialDistributionFunction_test_autogen/mocs_compilation.cpp
[ 93%] Building CXX object test/CMakeFiles/RadialDistributionFunction_test.dir/RadialDistributionFunction_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/RadialDistributionFunction_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/RadialDistributionFunction_test.dir/RadialDistributionFunction_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/RadialDistributionFunction_test.C
[ 93%] Linking CXX executable ../bin/TEST/RadialDistributionFunction_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/RadialDistributionFunction_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/RadialDistributionFunction_test.dir/RadialDistributionFunction_test_autogen/mocs_compilation.cpp.o CMakeFiles/RadialDistributionFunction_test.dir/RadialDistributionFunction_test.C.o -o ../bin/TEST/RadialDistributionFunction_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 93%] Built target RadialDistributionFunction_test
make  -f test/CMakeFiles/RDFParameter_test_autogen.dir/build.make test/CMakeFiles/RDFParameter_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/RDFParameter_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target RDFParameter_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/RDFParameter_test_autogen.dir/build.make test/CMakeFiles/RDFParameter_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 93%] Automatic MOC for target RDFParameter_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/RDFParameter_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 93%] Built target RDFParameter_test_autogen
make  -f test/CMakeFiles/RDFParameter_test.dir/build.make test/CMakeFiles/RDFParameter_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/RDFParameter_test.dir/DependInfo.cmake --color=
Scanning dependencies of target RDFParameter_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/RDFParameter_test.dir/build.make test/CMakeFiles/RDFParameter_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 93%] Building CXX object test/CMakeFiles/RDFParameter_test.dir/RDFParameter_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/RDFParameter_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/RDFParameter_test.dir/RDFParameter_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/RDFParameter_test_autogen/mocs_compilation.cpp
[ 93%] Building CXX object test/CMakeFiles/RDFParameter_test.dir/RDFParameter_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/RDFParameter_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/RDFParameter_test.dir/RDFParameter_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/RDFParameter_test.C
[ 93%] Linking CXX executable ../bin/TEST/RDFParameter_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/RDFParameter_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/RDFParameter_test.dir/RDFParameter_test_autogen/mocs_compilation.cpp.o CMakeFiles/RDFParameter_test.dir/RDFParameter_test.C.o -o ../bin/TEST/RDFParameter_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
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make  -f test/CMakeFiles/RDFSection_test_autogen.dir/build.make test/CMakeFiles/RDFSection_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/RDFSection_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target RDFSection_test_autogen
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make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 93%] Automatic MOC for target RDFSection_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/RDFSection_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 93%] Built target RDFSection_test_autogen
make  -f test/CMakeFiles/RDFSection_test.dir/build.make test/CMakeFiles/RDFSection_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/RDFSection_test.dir/DependInfo.cmake --color=
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[ 93%] Building CXX object test/CMakeFiles/RDFSection_test.dir/RDFSection_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/RDFSection_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/RDFSection_test.dir/RDFSection_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/RDFSection_test_autogen/mocs_compilation.cpp
[ 93%] Building CXX object test/CMakeFiles/RDFSection_test.dir/RDFSection_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/RDFSection_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/RDFSection_test.dir/RDFSection_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/RDFSection_test.C
[ 93%] Linking CXX executable ../bin/TEST/RDFSection_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/RDFSection_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/RDFSection_test.dir/RDFSection_test_autogen/mocs_compilation.cpp.o CMakeFiles/RDFSection_test.dir/RDFSection_test.C.o -o ../bin/TEST/RDFSection_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 93%] Built target RDFSection_test
make  -f test/CMakeFiles/RMSDMinimizer_test_autogen.dir/build.make test/CMakeFiles/RMSDMinimizer_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/RMSDMinimizer_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target RMSDMinimizer_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/RMSDMinimizer_test_autogen.dir/build.make test/CMakeFiles/RMSDMinimizer_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 93%] Automatic MOC for target RMSDMinimizer_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/RMSDMinimizer_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
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make  -f test/CMakeFiles/RMSDMinimizer_test.dir/build.make test/CMakeFiles/RMSDMinimizer_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/RMSDMinimizer_test.dir/DependInfo.cmake --color=
Scanning dependencies of target RMSDMinimizer_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/RMSDMinimizer_test.dir/build.make test/CMakeFiles/RMSDMinimizer_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 93%] Building CXX object test/CMakeFiles/RMSDMinimizer_test.dir/RMSDMinimizer_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/RMSDMinimizer_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/RMSDMinimizer_test.dir/RMSDMinimizer_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/RMSDMinimizer_test_autogen/mocs_compilation.cpp
[ 93%] Building CXX object test/CMakeFiles/RMSDMinimizer_test.dir/RMSDMinimizer_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/RMSDMinimizer_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/RMSDMinimizer_test.dir/RMSDMinimizer_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/RMSDMinimizer_test.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/atomBijection.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/RMSDMinimizer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/RMSDMinimizer_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/atomBijection.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/RMSDMinimizer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/RMSDMinimizer_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/atomBijection.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/RMSDMinimizer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/RMSDMinimizer_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/atomBijection.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/RMSDMinimizer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/RMSDMinimizer_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/atomBijection.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/RMSDMinimizer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/RMSDMinimizer_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/atomBijection.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/RMSDMinimizer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/RMSDMinimizer_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 93%] Linking CXX executable ../bin/TEST/RMSDMinimizer_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/RMSDMinimizer_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/RMSDMinimizer_test.dir/RMSDMinimizer_test_autogen/mocs_compilation.cpp.o CMakeFiles/RMSDMinimizer_test.dir/RMSDMinimizer_test.C.o -o ../bin/TEST/RMSDMinimizer_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 93%] Built target RMSDMinimizer_test
make  -f test/CMakeFiles/SmartsParser_test_autogen.dir/build.make test/CMakeFiles/SmartsParser_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/SmartsParser_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target SmartsParser_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/SmartsParser_test_autogen.dir/build.make test/CMakeFiles/SmartsParser_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 93%] Automatic MOC for target SmartsParser_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/SmartsParser_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 93%] Built target SmartsParser_test_autogen
make  -f test/CMakeFiles/SmartsParser_test.dir/build.make test/CMakeFiles/SmartsParser_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/SmartsParser_test.dir/DependInfo.cmake --color=
Scanning dependencies of target SmartsParser_test
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make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 93%] Building CXX object test/CMakeFiles/SmartsParser_test.dir/SmartsParser_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/SmartsParser_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/SmartsParser_test.dir/SmartsParser_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/SmartsParser_test_autogen/mocs_compilation.cpp
[ 93%] Building CXX object test/CMakeFiles/SmartsParser_test.dir/SmartsParser_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/SmartsParser_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/SmartsParser_test.dir/SmartsParser_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/SmartsParser_test.C
[ 94%] Linking CXX executable ../bin/TEST/SmartsParser_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/SmartsParser_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/SmartsParser_test.dir/SmartsParser_test_autogen/mocs_compilation.cpp.o CMakeFiles/SmartsParser_test.dir/SmartsParser_test.C.o -o ../bin/TEST/SmartsParser_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
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make  -f test/CMakeFiles/TransformationProcessor_test_autogen.dir/build.make test/CMakeFiles/TransformationProcessor_test_autogen.dir/depend
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cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/TransformationProcessor_test_autogen.dir/DependInfo.cmake --color=
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[ 94%] Automatic MOC for target TransformationProcessor_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/TransformationProcessor_test_autogen.dir/AutogenInfo.json Release
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make  -f test/CMakeFiles/TransformationProcessor_test.dir/build.make test/CMakeFiles/TransformationProcessor_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/TransformationProcessor_test.dir/DependInfo.cmake --color=
Scanning dependencies of target TransformationProcessor_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/TransformationProcessor_test.dir/build.make test/CMakeFiles/TransformationProcessor_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 94%] Building CXX object test/CMakeFiles/TransformationProcessor_test.dir/TransformationProcessor_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/TransformationProcessor_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/TransformationProcessor_test.dir/TransformationProcessor_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/TransformationProcessor_test_autogen/mocs_compilation.cpp
[ 94%] Building CXX object test/CMakeFiles/TransformationProcessor_test.dir/TransformationProcessor_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/TransformationProcessor_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/TransformationProcessor_test.dir/TransformationProcessor_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/TransformationProcessor_test.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/TransformationProcessor_test.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/geometricTransformations.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/TransformationProcessor_test.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/TransformationProcessor_test.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/geometricTransformations.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/TransformationProcessor_test.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/TransformationProcessor_test.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/geometricTransformations.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/TransformationProcessor_test.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 94%] Linking CXX executable ../bin/TEST/TransformationProcessor_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/TransformationProcessor_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/TransformationProcessor_test.dir/TransformationProcessor_test_autogen/mocs_compilation.cpp.o CMakeFiles/TransformationProcessor_test.dir/TransformationProcessor_test.C.o -o ../bin/TEST/TransformationProcessor_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 94%] Built target TransformationProcessor_test
make  -f test/CMakeFiles/TranslationProcessor_test_autogen.dir/build.make test/CMakeFiles/TranslationProcessor_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/TranslationProcessor_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target TranslationProcessor_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/TranslationProcessor_test_autogen.dir/build.make test/CMakeFiles/TranslationProcessor_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 94%] Automatic MOC for target TranslationProcessor_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/TranslationProcessor_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 94%] Built target TranslationProcessor_test_autogen
make  -f test/CMakeFiles/TranslationProcessor_test.dir/build.make test/CMakeFiles/TranslationProcessor_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/TranslationProcessor_test.dir/DependInfo.cmake --color=
Scanning dependencies of target TranslationProcessor_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/TranslationProcessor_test.dir/build.make test/CMakeFiles/TranslationProcessor_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 94%] Building CXX object test/CMakeFiles/TranslationProcessor_test.dir/TranslationProcessor_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/TranslationProcessor_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/TranslationProcessor_test.dir/TranslationProcessor_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/TranslationProcessor_test_autogen/mocs_compilation.cpp
[ 94%] Building CXX object test/CMakeFiles/TranslationProcessor_test.dir/TranslationProcessor_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/TranslationProcessor_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/TranslationProcessor_test.dir/TranslationProcessor_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/TranslationProcessor_test.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/TranslationProcessor_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/geometricTransformations.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/TranslationProcessor_test.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/TranslationProcessor_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/geometricTransformations.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/TranslationProcessor_test.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/TranslationProcessor_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/geometricTransformations.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/TranslationProcessor_test.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 94%] Linking CXX executable ../bin/TEST/TranslationProcessor_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/TranslationProcessor_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/TranslationProcessor_test.dir/TranslationProcessor_test_autogen/mocs_compilation.cpp.o CMakeFiles/TranslationProcessor_test.dir/TranslationProcessor_test.C.o -o ../bin/TEST/TranslationProcessor_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 94%] Built target TranslationProcessor_test
make  -f test/CMakeFiles/CompositeCompositeIteratorTraits_test_autogen.dir/build.make test/CMakeFiles/CompositeCompositeIteratorTraits_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/CompositeCompositeIteratorTraits_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target CompositeCompositeIteratorTraits_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/CompositeCompositeIteratorTraits_test_autogen.dir/build.make test/CMakeFiles/CompositeCompositeIteratorTraits_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 94%] Automatic MOC for target CompositeCompositeIteratorTraits_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/CompositeCompositeIteratorTraits_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 94%] Built target CompositeCompositeIteratorTraits_test_autogen
make  -f test/CMakeFiles/CompositeCompositeIteratorTraits_test.dir/build.make test/CMakeFiles/CompositeCompositeIteratorTraits_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/CompositeCompositeIteratorTraits_test.dir/DependInfo.cmake --color=
Scanning dependencies of target CompositeCompositeIteratorTraits_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/CompositeCompositeIteratorTraits_test.dir/build.make test/CMakeFiles/CompositeCompositeIteratorTraits_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 94%] Building CXX object test/CMakeFiles/CompositeCompositeIteratorTraits_test.dir/CompositeCompositeIteratorTraits_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CompositeCompositeIteratorTraits_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/CompositeCompositeIteratorTraits_test.dir/CompositeCompositeIteratorTraits_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CompositeCompositeIteratorTraits_test_autogen/mocs_compilation.cpp
[ 94%] Building CXX object test/CMakeFiles/CompositeCompositeIteratorTraits_test.dir/CompositeCompositeIteratorTraits_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CompositeCompositeIteratorTraits_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/CompositeCompositeIteratorTraits_test.dir/CompositeCompositeIteratorTraits_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/CompositeCompositeIteratorTraits_test.C
[ 94%] Linking CXX executable ../bin/TEST/CompositeCompositeIteratorTraits_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/CompositeCompositeIteratorTraits_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/CompositeCompositeIteratorTraits_test.dir/CompositeCompositeIteratorTraits_test_autogen/mocs_compilation.cpp.o CMakeFiles/CompositeCompositeIteratorTraits_test.dir/CompositeCompositeIteratorTraits_test.C.o -o ../bin/TEST/CompositeCompositeIteratorTraits_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 94%] Built target CompositeCompositeIteratorTraits_test
make  -f test/CMakeFiles/Composite_test3_autogen.dir/build.make test/CMakeFiles/Composite_test3_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/Composite_test3_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target Composite_test3_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/Composite_test3_autogen.dir/build.make test/CMakeFiles/Composite_test3_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 94%] Automatic MOC for target Composite_test3
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/Composite_test3_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 94%] Built target Composite_test3_autogen
make  -f test/CMakeFiles/Composite_test3.dir/build.make test/CMakeFiles/Composite_test3.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/Composite_test3.dir/DependInfo.cmake --color=
Scanning dependencies of target Composite_test3
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/Composite_test3.dir/build.make test/CMakeFiles/Composite_test3.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 94%] Building CXX object test/CMakeFiles/Composite_test3.dir/Composite_test3_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/Composite_test3_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Composite_test3.dir/Composite_test3_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/Composite_test3_autogen/mocs_compilation.cpp
[ 94%] Building CXX object test/CMakeFiles/Composite_test3.dir/Composite_test3.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/Composite_test3_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Composite_test3.dir/Composite_test3.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Composite_test3.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chain.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chainIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/protein.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Composite_test3.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Composite_test3.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chain.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chainIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/protein.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Composite_test3.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Composite_test3.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chain.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chainIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/protein.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Composite_test3.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Composite_test3.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 94%] Linking CXX executable ../bin/TEST/Composite_test3
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/Composite_test3.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Composite_test3.dir/Composite_test3_autogen/mocs_compilation.cpp.o CMakeFiles/Composite_test3.dir/Composite_test3.C.o -o ../bin/TEST/Composite_test3  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 94%] Built target Composite_test3
make  -f test/CMakeFiles/Contour_test_autogen.dir/build.make test/CMakeFiles/Contour_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/Contour_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target Contour_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/Contour_test_autogen.dir/build.make test/CMakeFiles/Contour_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 94%] Automatic MOC for target Contour_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/Contour_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 94%] Built target Contour_test_autogen
make  -f test/CMakeFiles/Contour_test.dir/build.make test/CMakeFiles/Contour_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/Contour_test.dir/DependInfo.cmake --color=
Scanning dependencies of target Contour_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/Contour_test.dir/build.make test/CMakeFiles/Contour_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 94%] Building CXX object test/CMakeFiles/Contour_test.dir/Contour_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/Contour_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Contour_test.dir/Contour_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/Contour_test_autogen/mocs_compilation.cpp
[ 94%] Building CXX object test/CMakeFiles/Contour_test.dir/Contour_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/Contour_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Contour_test.dir/Contour_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/Contour_test.C
[ 94%] Linking CXX executable ../bin/TEST/Contour_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/Contour_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Contour_test.dir/Contour_test_autogen/mocs_compilation.cpp.o CMakeFiles/Contour_test.dir/Contour_test.C.o -o ../bin/TEST/Contour_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 94%] Built target Contour_test
make  -f test/CMakeFiles/SurfaceProcessor_test_autogen.dir/build.make test/CMakeFiles/SurfaceProcessor_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/SurfaceProcessor_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target SurfaceProcessor_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/SurfaceProcessor_test_autogen.dir/build.make test/CMakeFiles/SurfaceProcessor_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 94%] Automatic MOC for target SurfaceProcessor_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/SurfaceProcessor_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 94%] Built target SurfaceProcessor_test_autogen
make  -f test/CMakeFiles/SurfaceProcessor_test.dir/build.make test/CMakeFiles/SurfaceProcessor_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/SurfaceProcessor_test.dir/DependInfo.cmake --color=
Scanning dependencies of target SurfaceProcessor_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/SurfaceProcessor_test.dir/build.make test/CMakeFiles/SurfaceProcessor_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 94%] Building CXX object test/CMakeFiles/SurfaceProcessor_test.dir/SurfaceProcessor_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/SurfaceProcessor_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/SurfaceProcessor_test.dir/SurfaceProcessor_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/SurfaceProcessor_test_autogen/mocs_compilation.cpp
[ 94%] Building CXX object test/CMakeFiles/SurfaceProcessor_test.dir/SurfaceProcessor_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/SurfaceProcessor_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/SurfaceProcessor_test.dir/SurfaceProcessor_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/SurfaceProcessor_test.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/moleculeIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/SurfaceProcessor_test.C:12:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/simpleBox3.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/reducedSurface.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/surfaceProcessor.h:12,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/SurfaceProcessor_test.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/moleculeIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/SurfaceProcessor_test.C:12:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/simpleBox3.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/reducedSurface.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/surfaceProcessor.h:12,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/SurfaceProcessor_test.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/moleculeIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/SurfaceProcessor_test.C:12:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/simpleBox3.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/reducedSurface.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/surfaceProcessor.h:12,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/SurfaceProcessor_test.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/solventExcludedSurface.h:45,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/surfaceProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/SurfaceProcessor_test.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h: In instantiation of 'BALL::Index BALL::HashGrid3<Item>::getIndex_(const BALL::HashGridBox3<Item>&) const [with Item = int; BALL::Index = int]':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:1667:20:   required from 'void BALL::HashGrid3<Item>::dump(std::ostream&, BALL::Size) const [with Item = int; std::ostream = std::basic_ostream<char>; BALL::Size = unsigned int]'
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:1625:7:   required from here
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:1726:46: warning: comparison of integer expressions of different signedness: 'int' and 'BALL::Size' {aka 'unsigned int'} [-Wsign-compare]
 1726 |   if ((&box < &box_[0]) || (&box - &box_[0]  >= getSize()))
      |                            ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~
[ 94%] Linking CXX executable ../bin/TEST/SurfaceProcessor_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/SurfaceProcessor_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/SurfaceProcessor_test.dir/SurfaceProcessor_test_autogen/mocs_compilation.cpp.o CMakeFiles/SurfaceProcessor_test.dir/SurfaceProcessor_test.C.o -o ../bin/TEST/SurfaceProcessor_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 94%] Built target SurfaceProcessor_test
make  -f test/CMakeFiles/UCK_test_autogen.dir/build.make test/CMakeFiles/UCK_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/UCK_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target UCK_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/UCK_test_autogen.dir/build.make test/CMakeFiles/UCK_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 94%] Automatic MOC for target UCK_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/UCK_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 94%] Built target UCK_test_autogen
make  -f test/CMakeFiles/UCK_test.dir/build.make test/CMakeFiles/UCK_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/UCK_test.dir/DependInfo.cmake --color=
Scanning dependencies of target UCK_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/UCK_test.dir/build.make test/CMakeFiles/UCK_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 94%] Building CXX object test/CMakeFiles/UCK_test.dir/UCK_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/UCK_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/UCK_test.dir/UCK_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/UCK_test_autogen/mocs_compilation.cpp
[ 96%] Building CXX object test/CMakeFiles/UCK_test.dir/UCK_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/UCK_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/UCK_test.dir/UCK_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/UCK_test.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/molecule.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/UCK_test.C:13:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/MOLFile.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/SDFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/UCK_test.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/molecule.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/UCK_test.C:13:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/MOLFile.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/SDFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/UCK_test.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/molecule.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/UCK_test.C:13:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/MOLFile.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/SDFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/UCK_test.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 96%] Linking CXX executable ../bin/TEST/UCK_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/UCK_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/UCK_test.dir/UCK_test_autogen/mocs_compilation.cpp.o CMakeFiles/UCK_test.dir/UCK_test.C.o -o ../bin/TEST/UCK_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 96%] Built target UCK_test
make  -f test/CMakeFiles/RegularData3D_test1_autogen.dir/build.make test/CMakeFiles/RegularData3D_test1_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/RegularData3D_test1_autogen.dir/DependInfo.cmake --color=
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[ 96%] Automatic MOC for target RegularData3D_test1
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/RegularData3D_test1_autogen.dir/AutogenInfo.json Release
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cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/RegularData3D_test1.dir/DependInfo.cmake --color=
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[ 96%] Building CXX object test/CMakeFiles/RegularData3D_test1.dir/RegularData3D_test1_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/RegularData3D_test1_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/RegularData3D_test1.dir/RegularData3D_test1_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/RegularData3D_test1_autogen/mocs_compilation.cpp
[ 96%] Building CXX object test/CMakeFiles/RegularData3D_test1.dir/RegularData3D_test1.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/RegularData3D_test1_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/RegularData3D_test1.dir/RegularData3D_test1.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/RegularData3D_test1.C
[ 97%] Linking CXX executable ../bin/TEST/RegularData3D_test1
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/RegularData3D_test1.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/RegularData3D_test1.dir/RegularData3D_test1_autogen/mocs_compilation.cpp.o CMakeFiles/RegularData3D_test1.dir/RegularData3D_test1.C.o -o ../bin/TEST/RegularData3D_test1  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 97%] Built target RegularData3D_test1
make  -f test/CMakeFiles/BuildBondsProcessor_test_autogen.dir/build.make test/CMakeFiles/BuildBondsProcessor_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/BuildBondsProcessor_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target BuildBondsProcessor_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/BuildBondsProcessor_test_autogen.dir/build.make test/CMakeFiles/BuildBondsProcessor_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 97%] Automatic MOC for target BuildBondsProcessor_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/BuildBondsProcessor_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 97%] Built target BuildBondsProcessor_test_autogen
make  -f test/CMakeFiles/BuildBondsProcessor_test.dir/build.make test/CMakeFiles/BuildBondsProcessor_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/BuildBondsProcessor_test.dir/DependInfo.cmake --color=
Scanning dependencies of target BuildBondsProcessor_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/BuildBondsProcessor_test.dir/build.make test/CMakeFiles/BuildBondsProcessor_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 97%] Building CXX object test/CMakeFiles/BuildBondsProcessor_test.dir/BuildBondsProcessor_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/BuildBondsProcessor_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/BuildBondsProcessor_test.dir/BuildBondsProcessor_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/BuildBondsProcessor_test_autogen/mocs_compilation.cpp
[ 97%] Building CXX object test/CMakeFiles/BuildBondsProcessor_test.dir/BuildBondsProcessor_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/BuildBondsProcessor_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/BuildBondsProcessor_test.dir/BuildBondsProcessor_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/BuildBondsProcessor_test.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/buildBondsProcessor.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/BuildBondsProcessor_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/buildBondsProcessor.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/BuildBondsProcessor_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/buildBondsProcessor.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/BuildBondsProcessor_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/buildBondsProcessor.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/BuildBondsProcessor_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/buildBondsProcessor.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/BuildBondsProcessor_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/buildBondsProcessor.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/BuildBondsProcessor_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/BuildBondsProcessor_test.C:12:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/BuildBondsProcessor_test.C: In function 'int main(int, char**)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:108:49: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  108 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/BuildBondsProcessor_test.C:91:3: note: in expansion of macro 'BALL_FOREACH_BOND'
   91 |   BALL_FOREACH_BOND(*mit, ait, bit)
      |   ^~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/buildBondsProcessor.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/BuildBondsProcessor_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/BuildBondsProcessor_test.C:12:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/BuildBondsProcessor_test.C: In function 'int main(int, char**)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:108:49: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' first required here
  108 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/BuildBondsProcessor_test.C:91:3: note: in expansion of macro 'BALL_FOREACH_BOND'
   91 |   BALL_FOREACH_BOND(*mit, ait, bit)
      |   ^~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:110:51: warning: implicitly-declared 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  110 |   for (bond_iterator = (*atom_iterator).beginBond(); \
      |                                                   ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/BuildBondsProcessor_test.C:91:3: note: in expansion of macro 'BALL_FOREACH_BOND'
   91 |   BALL_FOREACH_BOND(*mit, ait, bit)
      |   ^~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/buildBondsProcessor.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/BuildBondsProcessor_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:437:15: note: because 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::RandomAccessIterator<Container, DataType, Position, Traits>::RandomAccessIterator(const BALL::RandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
  437 |   BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:413:8: warning: implicitly-declared 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  413 |  class RandomAccessIterator
      |        ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:47:15: note: because 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   47 |   BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:24:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   24 |  class ConstRandomAccessIterator
      |        ^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/buildBondsProcessor.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/BuildBondsProcessor_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/buildBondsProcessor.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/BuildBondsProcessor_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:413:8: note: synthesized method 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' first required here
  413 |  class RandomAccessIterator
      |        ^~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/BuildBondsProcessor_test.C:12:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/BuildBondsProcessor_test.C: In function 'int main(int, char**)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:110:51: note: synthesized method 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' first required here
  110 |   for (bond_iterator = (*atom_iterator).beginBond(); \
      |                                                   ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/BuildBondsProcessor_test.C:91:3: note: in expansion of macro 'BALL_FOREACH_BOND'
   91 |   BALL_FOREACH_BOND(*mit, ait, bit)
      |   ^~~~~~~~~~~~~~~~~
[ 97%] Linking CXX executable ../bin/TEST/BuildBondsProcessor_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/BuildBondsProcessor_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/BuildBondsProcessor_test.dir/BuildBondsProcessor_test_autogen/mocs_compilation.cpp.o CMakeFiles/BuildBondsProcessor_test.dir/BuildBondsProcessor_test.C.o -o ../bin/TEST/BuildBondsProcessor_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 97%] Built target BuildBondsProcessor_test
make  -f test/CMakeFiles/RingAnalyser_test_autogen.dir/build.make test/CMakeFiles/RingAnalyser_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/RingAnalyser_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target RingAnalyser_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/RingAnalyser_test_autogen.dir/build.make test/CMakeFiles/RingAnalyser_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 97%] Automatic MOC for target RingAnalyser_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/RingAnalyser_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 97%] Built target RingAnalyser_test_autogen
make  -f test/CMakeFiles/RingAnalyser_test.dir/build.make test/CMakeFiles/RingAnalyser_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/RingAnalyser_test.dir/DependInfo.cmake --color=
Scanning dependencies of target RingAnalyser_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/RingAnalyser_test.dir/build.make test/CMakeFiles/RingAnalyser_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 97%] Building CXX object test/CMakeFiles/RingAnalyser_test.dir/RingAnalyser_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/RingAnalyser_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/RingAnalyser_test.dir/RingAnalyser_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/RingAnalyser_test_autogen/mocs_compilation.cpp
[ 97%] Building CXX object test/CMakeFiles/RingAnalyser_test.dir/RingAnalyser_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/RingAnalyser_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/RingAnalyser_test.dir/RingAnalyser_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/RingAnalyser_test.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/ringAnalyser.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/RingAnalyser_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/ringAnalyser.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/RingAnalyser_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/ringAnalyser.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/RingAnalyser_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/ringAnalyser.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/RingAnalyser_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/ringAnalyser.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/RingAnalyser_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/ringAnalyser.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/RingAnalyser_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 97%] Linking CXX executable ../bin/TEST/RingAnalyser_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/RingAnalyser_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/RingAnalyser_test.dir/RingAnalyser_test_autogen/mocs_compilation.cpp.o CMakeFiles/RingAnalyser_test.dir/RingAnalyser_test.C.o -o ../bin/TEST/RingAnalyser_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 97%] Built target RingAnalyser_test
make  -f test/CMakeFiles/ResidueRotamerSet_test_autogen.dir/build.make test/CMakeFiles/ResidueRotamerSet_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/ResidueRotamerSet_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target ResidueRotamerSet_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/ResidueRotamerSet_test_autogen.dir/build.make test/CMakeFiles/ResidueRotamerSet_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 97%] Automatic MOC for target ResidueRotamerSet_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/ResidueRotamerSet_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 97%] Built target ResidueRotamerSet_test_autogen
make  -f test/CMakeFiles/ResidueRotamerSet_test.dir/build.make test/CMakeFiles/ResidueRotamerSet_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/ResidueRotamerSet_test.dir/DependInfo.cmake --color=
Scanning dependencies of target ResidueRotamerSet_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/ResidueRotamerSet_test.dir/build.make test/CMakeFiles/ResidueRotamerSet_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 97%] Building CXX object test/CMakeFiles/ResidueRotamerSet_test.dir/ResidueRotamerSet_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/ResidueRotamerSet_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/ResidueRotamerSet_test.dir/ResidueRotamerSet_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/ResidueRotamerSet_test_autogen/mocs_compilation.cpp
[ 97%] Building CXX object test/CMakeFiles/ResidueRotamerSet_test.dir/ResidueRotamerSet_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/ResidueRotamerSet_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/ResidueRotamerSet_test.dir/ResidueRotamerSet_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ResidueRotamerSet_test.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ResidueRotamerSet_test.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/residueRotamerSet.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ResidueRotamerSet_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ResidueRotamerSet_test.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/residueRotamerSet.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ResidueRotamerSet_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ResidueRotamerSet_test.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/residueRotamerSet.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ResidueRotamerSet_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 97%] Linking CXX executable ../bin/TEST/ResidueRotamerSet_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/ResidueRotamerSet_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/ResidueRotamerSet_test.dir/ResidueRotamerSet_test_autogen/mocs_compilation.cpp.o CMakeFiles/ResidueRotamerSet_test.dir/ResidueRotamerSet_test.C.o -o ../bin/TEST/ResidueRotamerSet_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 97%] Built target ResidueRotamerSet_test
make  -f test/CMakeFiles/PoissonBoltzmann_test_autogen.dir/build.make test/CMakeFiles/PoissonBoltzmann_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/PoissonBoltzmann_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target PoissonBoltzmann_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/PoissonBoltzmann_test_autogen.dir/build.make test/CMakeFiles/PoissonBoltzmann_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 97%] Automatic MOC for target PoissonBoltzmann_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/PoissonBoltzmann_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 97%] Built target PoissonBoltzmann_test_autogen
make  -f test/CMakeFiles/PoissonBoltzmann_test.dir/build.make test/CMakeFiles/PoissonBoltzmann_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/PoissonBoltzmann_test.dir/DependInfo.cmake --color=
Scanning dependencies of target PoissonBoltzmann_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/PoissonBoltzmann_test.dir/build.make test/CMakeFiles/PoissonBoltzmann_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 98%] Building CXX object test/CMakeFiles/PoissonBoltzmann_test.dir/PoissonBoltzmann_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/PoissonBoltzmann_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/PoissonBoltzmann_test.dir/PoissonBoltzmann_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/PoissonBoltzmann_test_autogen/mocs_compilation.cpp
[ 98%] Building CXX object test/CMakeFiles/PoissonBoltzmann_test.dir/PoissonBoltzmann_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/PoissonBoltzmann_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/PoissonBoltzmann_test.dir/PoissonBoltzmann_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/PoissonBoltzmann_test.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SOLVATION/poissonBoltzmann.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/PoissonBoltzmann_test.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/regularData3D.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SOLVATION/poissonBoltzmann.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/PoissonBoltzmann_test.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SOLVATION/poissonBoltzmann.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/PoissonBoltzmann_test.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/regularData3D.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SOLVATION/poissonBoltzmann.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/PoissonBoltzmann_test.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SOLVATION/poissonBoltzmann.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/PoissonBoltzmann_test.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/regularData3D.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SOLVATION/poissonBoltzmann.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/PoissonBoltzmann_test.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 98%] Linking CXX executable ../bin/TEST/PoissonBoltzmann_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/PoissonBoltzmann_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/PoissonBoltzmann_test.dir/PoissonBoltzmann_test_autogen/mocs_compilation.cpp.o CMakeFiles/PoissonBoltzmann_test.dir/PoissonBoltzmann_test.C.o -o ../bin/TEST/PoissonBoltzmann_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 98%] Built target PoissonBoltzmann_test
make  -f test/CMakeFiles/NucleicAcid_test_autogen.dir/build.make test/CMakeFiles/NucleicAcid_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/NucleicAcid_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target NucleicAcid_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/NucleicAcid_test_autogen.dir/build.make test/CMakeFiles/NucleicAcid_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 98%] Automatic MOC for target NucleicAcid_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/NucleicAcid_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 98%] Built target NucleicAcid_test_autogen
make  -f test/CMakeFiles/NucleicAcid_test.dir/build.make test/CMakeFiles/NucleicAcid_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/NucleicAcid_test.dir/DependInfo.cmake --color=
Scanning dependencies of target NucleicAcid_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/NucleicAcid_test.dir/build.make test/CMakeFiles/NucleicAcid_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 98%] Building CXX object test/CMakeFiles/NucleicAcid_test.dir/NucleicAcid_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/NucleicAcid_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/NucleicAcid_test.dir/NucleicAcid_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/NucleicAcid_test_autogen/mocs_compilation.cpp
[ 98%] Building CXX object test/CMakeFiles/NucleicAcid_test.dir/NucleicAcid_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/NucleicAcid_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/NucleicAcid_test.dir/NucleicAcid_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/NucleicAcid_test.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/molecule.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/nucleicAcid.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/NucleicAcid_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/molecule.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/nucleicAcid.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/NucleicAcid_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/molecule.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/nucleicAcid.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/NucleicAcid_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/molecule.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/nucleicAcid.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/NucleicAcid_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/molecule.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/nucleicAcid.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/NucleicAcid_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/molecule.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/nucleicAcid.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/NucleicAcid_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 98%] Linking CXX executable ../bin/TEST/NucleicAcid_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/NucleicAcid_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/NucleicAcid_test.dir/NucleicAcid_test_autogen/mocs_compilation.cpp.o CMakeFiles/NucleicAcid_test.dir/NucleicAcid_test.C.o -o ../bin/TEST/NucleicAcid_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 98%] Built target NucleicAcid_test
make  -f test/CMakeFiles/ReconstructFragmentProcessor_test_autogen.dir/build.make test/CMakeFiles/ReconstructFragmentProcessor_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/ReconstructFragmentProcessor_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target ReconstructFragmentProcessor_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/ReconstructFragmentProcessor_test_autogen.dir/build.make test/CMakeFiles/ReconstructFragmentProcessor_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 98%] Automatic MOC for target ReconstructFragmentProcessor_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/ReconstructFragmentProcessor_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 98%] Built target ReconstructFragmentProcessor_test_autogen
make  -f test/CMakeFiles/ReconstructFragmentProcessor_test.dir/build.make test/CMakeFiles/ReconstructFragmentProcessor_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/ReconstructFragmentProcessor_test.dir/DependInfo.cmake --color=
Scanning dependencies of target ReconstructFragmentProcessor_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/ReconstructFragmentProcessor_test.dir/build.make test/CMakeFiles/ReconstructFragmentProcessor_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 98%] Building CXX object test/CMakeFiles/ReconstructFragmentProcessor_test.dir/ReconstructFragmentProcessor_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/ReconstructFragmentProcessor_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/ReconstructFragmentProcessor_test.dir/ReconstructFragmentProcessor_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/ReconstructFragmentProcessor_test_autogen/mocs_compilation.cpp
[ 98%] Building CXX object test/CMakeFiles/ReconstructFragmentProcessor_test.dir/ReconstructFragmentProcessor_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/ReconstructFragmentProcessor_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/ReconstructFragmentProcessor_test.dir/ReconstructFragmentProcessor_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ReconstructFragmentProcessor_test.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/reconstructFragmentProcessor.h:23,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ReconstructFragmentProcessor_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/matrix44.h:23,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/reconstructFragmentProcessor.h:19,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ReconstructFragmentProcessor_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/reconstructFragmentProcessor.h:23,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ReconstructFragmentProcessor_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/matrix44.h:23,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/reconstructFragmentProcessor.h:19,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ReconstructFragmentProcessor_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/reconstructFragmentProcessor.h:23,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ReconstructFragmentProcessor_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/matrix44.h:23,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/reconstructFragmentProcessor.h:19,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/ReconstructFragmentProcessor_test.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 98%] Linking CXX executable ../bin/TEST/ReconstructFragmentProcessor_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/ReconstructFragmentProcessor_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/ReconstructFragmentProcessor_test.dir/ReconstructFragmentProcessor_test_autogen/mocs_compilation.cpp.o CMakeFiles/ReconstructFragmentProcessor_test.dir/ReconstructFragmentProcessor_test.C.o -o ../bin/TEST/ReconstructFragmentProcessor_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 98%] Built target ReconstructFragmentProcessor_test
make  -f test/CMakeFiles/SolventDescriptor_test_autogen.dir/build.make test/CMakeFiles/SolventDescriptor_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/SolventDescriptor_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target SolventDescriptor_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/SolventDescriptor_test_autogen.dir/build.make test/CMakeFiles/SolventDescriptor_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 98%] Automatic MOC for target SolventDescriptor_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/SolventDescriptor_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
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make  -f test/CMakeFiles/SolventDescriptor_test.dir/build.make test/CMakeFiles/SolventDescriptor_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/SolventDescriptor_test.dir/DependInfo.cmake --color=
Scanning dependencies of target SolventDescriptor_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
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make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 98%] Building CXX object test/CMakeFiles/SolventDescriptor_test.dir/SolventDescriptor_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/SolventDescriptor_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/SolventDescriptor_test.dir/SolventDescriptor_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/SolventDescriptor_test_autogen/mocs_compilation.cpp
[ 98%] Building CXX object test/CMakeFiles/SolventDescriptor_test.dir/SolventDescriptor_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/SolventDescriptor_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/SolventDescriptor_test.dir/SolventDescriptor_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/SolventDescriptor_test.C
[ 98%] Linking CXX executable ../bin/TEST/SolventDescriptor_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/SolventDescriptor_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/SolventDescriptor_test.dir/SolventDescriptor_test_autogen/mocs_compilation.cpp.o CMakeFiles/SolventDescriptor_test.dir/SolventDescriptor_test.C.o -o ../bin/TEST/SolventDescriptor_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
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cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/BallAndStickModel_test_autogen.dir/DependInfo.cmake --color=
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make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 98%] Building CXX object test/CMakeFiles/BallAndStickModel_test.dir/BallAndStickModel_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/BallAndStickModel_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/BallAndStickModel_test.dir/BallAndStickModel_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/BallAndStickModel_test_autogen/mocs_compilation.cpp
[ 98%] Building CXX object test/CMakeFiles/BallAndStickModel_test.dir/BallAndStickModel_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/BallAndStickModel_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/BallAndStickModel_test.dir/BallAndStickModel_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/BallAndStickModel_test.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/secondaryStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBdefs.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/BallAndStickModel_test.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/BallAndStickModel_test.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/secondaryStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBdefs.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/BallAndStickModel_test.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/BallAndStickModel_test.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/secondaryStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBdefs.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/BallAndStickModel_test.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/BallAndStickModel_test.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/BallAndStickModel_test.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/BallAndStickModel_test.C: In function 'int main(int, char**)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:141:49: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  141 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/BallAndStickModel_test.C:117:1: note: in expansion of macro 'BALL_FOREACH_INTRABOND'
  117 | BALL_FOREACH_INTRABOND(system, ait, abit)
      | ^~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/BallAndStickModel_test.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/BallAndStickModel_test.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/BallAndStickModel_test.C: In function 'int main(int, char**)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:141:49: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' first required here
  141 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/BallAndStickModel_test.C:117:1: note: in expansion of macro 'BALL_FOREACH_INTRABOND'
  117 | BALL_FOREACH_INTRABOND(system, ait, abit)
      | ^~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:143:51: warning: implicitly-declared 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  143 |   for (bond_iterator = (*atom_iterator).beginBond(); \
      |                                                   ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/BallAndStickModel_test.C:117:1: note: in expansion of macro 'BALL_FOREACH_INTRABOND'
  117 | BALL_FOREACH_INTRABOND(system, ait, abit)
      | ^~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBdefs.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/BallAndStickModel_test.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:437:15: note: because 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::RandomAccessIterator<Container, DataType, Position, Traits>::RandomAccessIterator(const BALL::RandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
  437 |   BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:413:8: warning: implicitly-declared 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  413 |  class RandomAccessIterator
      |        ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:47:15: note: because 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   47 |   BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:24:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   24 |  class ConstRandomAccessIterator
      |        ^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/BallAndStickModel_test.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBdefs.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/BallAndStickModel_test.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:413:8: note: synthesized method 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' first required here
  413 |  class RandomAccessIterator
      |        ^~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/BallAndStickModel_test.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/BallAndStickModel_test.C: In function 'int main(int, char**)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:143:51: note: synthesized method 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' first required here
  143 |   for (bond_iterator = (*atom_iterator).beginBond(); \
      |                                                   ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/BallAndStickModel_test.C:117:1: note: in expansion of macro 'BALL_FOREACH_INTRABOND'
  117 | BALL_FOREACH_INTRABOND(system, ait, abit)
      | ^~~~~~~~~~~~~~~~~~~~~~
[ 98%] Linking CXX executable ../bin/TEST/BallAndStickModel_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/BallAndStickModel_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/BallAndStickModel_test.dir/BallAndStickModel_test_autogen/mocs_compilation.cpp.o CMakeFiles/BallAndStickModel_test.dir/BallAndStickModel_test.C.o -o ../bin/TEST/BallAndStickModel_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libVIEW.so.1.5 -lpthread -lGLEW ../lib/libBALL.so.1.5 /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 -lpython3.9 -lpthread /usr/lib/i386-linux-gnu/libQt5OpenGL.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Test.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5WebEngineWidgets.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5PrintSupport.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Widgets.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5WebEngineCore.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Positioning.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Quick.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Gui.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5QmlModels.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5WebChannel.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Qml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lGL -lGLU 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 98%] Built target BallAndStickModel_test
make  -f test/CMakeFiles/JCAMPFile_test_autogen.dir/build.make test/CMakeFiles/JCAMPFile_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/JCAMPFile_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target JCAMPFile_test_autogen
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make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 98%] Automatic MOC for target JCAMPFile_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/JCAMPFile_test_autogen.dir/AutogenInfo.json Release
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[ 98%] Built target JCAMPFile_test_autogen
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cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/JCAMPFile_test.dir/DependInfo.cmake --color=
Scanning dependencies of target JCAMPFile_test
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make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[100%] Building CXX object test/CMakeFiles/JCAMPFile_test.dir/JCAMPFile_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/JCAMPFile_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/JCAMPFile_test.dir/JCAMPFile_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/JCAMPFile_test_autogen/mocs_compilation.cpp
[100%] Building CXX object test/CMakeFiles/JCAMPFile_test.dir/JCAMPFile_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/JCAMPFile_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/JCAMPFile_test.dir/JCAMPFile_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/JCAMPFile_test.C
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/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/JCAMPFile_test.dir/JCAMPFile_test_autogen/mocs_compilation.cpp.o CMakeFiles/JCAMPFile_test.dir/JCAMPFile_test.C.o -o ../bin/TEST/JCAMPFile_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
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cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/PeptideCapProcessor_test_autogen.dir/DependInfo.cmake --color=
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make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[100%] Automatic MOC for target PeptideCapProcessor_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/PeptideCapProcessor_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[100%] Built target PeptideCapProcessor_test_autogen
make  -f test/CMakeFiles/PeptideCapProcessor_test.dir/build.make test/CMakeFiles/PeptideCapProcessor_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/PeptideCapProcessor_test.dir/DependInfo.cmake --color=
Scanning dependencies of target PeptideCapProcessor_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/PeptideCapProcessor_test.dir/build.make test/CMakeFiles/PeptideCapProcessor_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[100%] Building CXX object test/CMakeFiles/PeptideCapProcessor_test.dir/PeptideCapProcessor_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/PeptideCapProcessor_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/PeptideCapProcessor_test.dir/PeptideCapProcessor_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/PeptideCapProcessor_test_autogen/mocs_compilation.cpp
[100%] Building CXX object test/CMakeFiles/PeptideCapProcessor_test.dir/PeptideCapProcessor_test.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/PeptideCapProcessor_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/PeptideCapProcessor_test.dir/PeptideCapProcessor_test.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/PeptideCapProcessor_test.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/peptideCapProcessor.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/PeptideCapProcessor_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/peptideCapProcessor.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/PeptideCapProcessor_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/peptideCapProcessor.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/PeptideCapProcessor_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/peptideCapProcessor.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/PeptideCapProcessor_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/peptideCapProcessor.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/PeptideCapProcessor_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/peptideCapProcessor.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test/PeptideCapProcessor_test.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[100%] Linking CXX executable ../bin/TEST/PeptideCapProcessor_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/PeptideCapProcessor_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/PeptideCapProcessor_test.dir/PeptideCapProcessor_test_autogen/mocs_compilation.cpp.o CMakeFiles/PeptideCapProcessor_test.dir/PeptideCapProcessor_test.C.o -o ../bin/TEST/PeptideCapProcessor_test  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[100%] Built target PeptideCapProcessor_test
make  -f test/CMakeFiles/ClaverieParameter_test_autogen.dir/build.make test/CMakeFiles/ClaverieParameter_test_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/ClaverieParameter_test_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target ClaverieParameter_test_autogen
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/ClaverieParameter_test_autogen.dir/build.make test/CMakeFiles/ClaverieParameter_test_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[100%] Automatic MOC for target ClaverieParameter_test
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/ClaverieParameter_test_autogen.dir/AutogenInfo.json Release
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[100%] Built target ClaverieParameter_test_autogen
make  -f test/CMakeFiles/ClaverieParameter_test.dir/build.make test/CMakeFiles/ClaverieParameter_test.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/CMakeFiles/ClaverieParameter_test.dir/DependInfo.cmake --color=
Scanning dependencies of target ClaverieParameter_test
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f test/CMakeFiles/ClaverieParameter_test.dir/build.make test/CMakeFiles/ClaverieParameter_test.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[100%] Building CXX object test/CMakeFiles/ClaverieParameter_test.dir/ClaverieParameter_test_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/ClaverieParameter_test_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/ClaverieParameter_test.dir/ClaverieParameter_test_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/test/ClaverieParameter_test_autogen/mocs_compilation.cpp
[100%] Building CXX object test/CMakeFiles/ClaverieParameter_test.dir/ClaverieParameter_test.C.o
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cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/InputReader_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/InputReader.dir/InputReader_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/InputReader_autogen/mocs_compilation.cpp
[ 60%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/InputReader.dir/InputReader.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/InputReader_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/InputReader.dir/InputReader.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/InputReader.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/modelFactory.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/registry.h:5,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/InputReader.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/commandlineParser.h:4,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/InputReader.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/modelFactory.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/registry.h:5,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/InputReader.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/commandlineParser.h:4,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/InputReader.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/modelFactory.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/registry.h:5,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/InputReader.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/commandlineParser.h:4,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/InputReader.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 60%] Linking CXX executable ../../../bin/TOOLS/InputReader
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_link_script CMakeFiles/InputReader.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/InputReader.dir/InputReader_autogen/mocs_compilation.cpp.o CMakeFiles/InputReader.dir/InputReader.C.o -o ../../../bin/TOOLS/InputReader  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../../../lib/libBALL.so.1.5 /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 60%] Built target InputReader
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/InputPartitioner_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/InputPartitioner_autogen.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/InputPartitioner_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target InputPartitioner_autogen
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/InputPartitioner_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/InputPartitioner_autogen.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 60%] Automatic MOC for target InputPartitioner
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/InputPartitioner_autogen.dir/AutogenInfo.json Release
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 60%] Built target InputPartitioner_autogen
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/InputPartitioner.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/InputPartitioner.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/InputPartitioner.dir/DependInfo.cmake --color=
Scanning dependencies of target InputPartitioner
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/InputPartitioner.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/InputPartitioner.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 60%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/InputPartitioner.dir/InputPartitioner_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/InputPartitioner_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/InputPartitioner.dir/InputPartitioner_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/InputPartitioner_autogen/mocs_compilation.cpp
[ 60%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/InputPartitioner.dir/InputPartitioner.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/InputPartitioner_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/InputPartitioner.dir/InputPartitioner.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/InputPartitioner.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/modelFactory.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/registry.h:5,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/InputPartitioner.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/commandlineParser.h:4,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/InputPartitioner.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/modelFactory.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/registry.h:5,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/InputPartitioner.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/commandlineParser.h:4,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/InputPartitioner.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/modelFactory.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/registry.h:5,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/InputPartitioner.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/commandlineParser.h:4,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/InputPartitioner.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 60%] Linking CXX executable ../../../bin/TOOLS/InputPartitioner
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_link_script CMakeFiles/InputPartitioner.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/InputPartitioner.dir/InputPartitioner_autogen/mocs_compilation.cpp.o CMakeFiles/InputPartitioner.dir/InputPartitioner.C.o -o ../../../bin/TOOLS/InputPartitioner  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../../../lib/libBALL.so.1.5 /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 60%] Built target InputPartitioner
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/PartialChargesCopy_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/PartialChargesCopy_autogen.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/PartialChargesCopy_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target PartialChargesCopy_autogen
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/PartialChargesCopy_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/PartialChargesCopy_autogen.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 60%] Automatic MOC for target PartialChargesCopy
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/PartialChargesCopy_autogen.dir/AutogenInfo.json Release
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 60%] Built target PartialChargesCopy_autogen
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/PartialChargesCopy.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/PartialChargesCopy.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/PartialChargesCopy.dir/DependInfo.cmake --color=
Scanning dependencies of target PartialChargesCopy
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/PartialChargesCopy.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/PartialChargesCopy.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 60%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/PartialChargesCopy.dir/PartialChargesCopy_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/PartialChargesCopy_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/PartialChargesCopy.dir/PartialChargesCopy_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/PartialChargesCopy_autogen/mocs_compilation.cpp
[ 60%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/PartialChargesCopy.dir/PartialChargesCopy.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/PartialChargesCopy_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/PartialChargesCopy.dir/PartialChargesCopy.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/PartialChargesCopy.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/molecule.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/PartialChargesCopy.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/commandlineParser.h:4,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/PartialChargesCopy.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/molecule.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/PartialChargesCopy.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/commandlineParser.h:4,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/PartialChargesCopy.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/molecule.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/PartialChargesCopy.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/commandlineParser.h:4,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/PartialChargesCopy.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 60%] Linking CXX executable ../../../bin/TOOLS/PartialChargesCopy
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_link_script CMakeFiles/PartialChargesCopy.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/PartialChargesCopy.dir/PartialChargesCopy_autogen/mocs_compilation.cpp.o CMakeFiles/PartialChargesCopy.dir/PartialChargesCopy.C.o -o ../../../bin/TOOLS/PartialChargesCopy  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../../../lib/libBALL.so.1.5 /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 60%] Built target PartialChargesCopy
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/ExtractProteinSequence_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/ExtractProteinSequence_autogen.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/ExtractProteinSequence_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target ExtractProteinSequence_autogen
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/ExtractProteinSequence_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/ExtractProteinSequence_autogen.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 60%] Automatic MOC for target ExtractProteinSequence
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/ExtractProteinSequence_autogen.dir/AutogenInfo.json Release
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 60%] Built target ExtractProteinSequence_autogen
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/ExtractProteinSequence.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/ExtractProteinSequence.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/ExtractProteinSequence.dir/DependInfo.cmake --color=
Scanning dependencies of target ExtractProteinSequence
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/ExtractProteinSequence.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/ExtractProteinSequence.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 60%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/ExtractProteinSequence.dir/ExtractProteinSequence_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/ExtractProteinSequence_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/ExtractProteinSequence.dir/ExtractProteinSequence_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/ExtractProteinSequence_autogen/mocs_compilation.cpp
[ 60%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/ExtractProteinSequence.dir/ExtractProteinSequence.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/ExtractProteinSequence_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/ExtractProteinSequence.dir/ExtractProteinSequence.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/ExtractProteinSequence.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/secondaryStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBdefs.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/ExtractProteinSequence.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/ExtractProteinSequence.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/secondaryStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBdefs.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/ExtractProteinSequence.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/ExtractProteinSequence.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/secondaryStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBdefs.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/ExtractProteinSequence.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/ExtractProteinSequence.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 60%] Linking CXX executable ../../../bin/TOOLS/ExtractProteinSequence
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_link_script CMakeFiles/ExtractProteinSequence.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/ExtractProteinSequence.dir/ExtractProteinSequence_autogen/mocs_compilation.cpp.o CMakeFiles/ExtractProteinSequence.dir/ExtractProteinSequence.C.o -o ../../../bin/TOOLS/ExtractProteinSequence  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../../../lib/libBALL.so.1.5 /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 60%] Built target ExtractProteinSequence
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/IMGDock_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/IMGDock_autogen.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/IMGDock_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target IMGDock_autogen
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/IMGDock_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/IMGDock_autogen.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 60%] Automatic MOC for target IMGDock
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/IMGDock_autogen.dir/AutogenInfo.json Release
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 60%] Built target IMGDock_autogen
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/IMGDock.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/IMGDock.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/IMGDock.dir/DependInfo.cmake --color=
Scanning dependencies of target IMGDock
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/IMGDock.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/IMGDock.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 60%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/IMGDock.dir/IMGDock_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/IMGDock_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/IMGDock.dir/IMGDock_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/IMGDock_autogen/mocs_compilation.cpp
[ 62%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/IMGDock.dir/IMGDock.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/IMGDock_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/IMGDock.dir/IMGDock.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/IMGDock.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/secondaryStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBdefs.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/IMGDock.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/IMGDock.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/secondaryStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBdefs.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/IMGDock.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/IMGDock.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/secondaryStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBdefs.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/IMGDock.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/IMGDock.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 62%] Linking CXX executable ../../../bin/TOOLS/IMGDock
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_link_script CMakeFiles/IMGDock.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/IMGDock.dir/IMGDock_autogen/mocs_compilation.cpp.o CMakeFiles/IMGDock.dir/IMGDock.C.o -o ../../../bin/TOOLS/IMGDock  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../../../lib/libBALL.so.1.5 /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 62%] Built target IMGDock
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/LigandFileSplitter_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/LigandFileSplitter_autogen.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/LigandFileSplitter_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target LigandFileSplitter_autogen
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/LigandFileSplitter_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/LigandFileSplitter_autogen.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 62%] Automatic MOC for target LigandFileSplitter
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/LigandFileSplitter_autogen.dir/AutogenInfo.json Release
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 62%] Built target LigandFileSplitter_autogen
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/LigandFileSplitter.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/LigandFileSplitter.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/LigandFileSplitter.dir/DependInfo.cmake --color=
Scanning dependencies of target LigandFileSplitter
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/LigandFileSplitter.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/LigandFileSplitter.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 62%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/LigandFileSplitter.dir/LigandFileSplitter_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/LigandFileSplitter_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/LigandFileSplitter.dir/LigandFileSplitter_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/LigandFileSplitter_autogen/mocs_compilation.cpp
[ 62%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/LigandFileSplitter.dir/LigandFileSplitter.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/LigandFileSplitter_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/LigandFileSplitter.dir/LigandFileSplitter.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/LigandFileSplitter.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/secondaryStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBdefs.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/dockResultFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/LigandFileSplitter.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/dockResultFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/LigandFileSplitter.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/secondaryStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBdefs.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/dockResultFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/LigandFileSplitter.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/dockResultFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/LigandFileSplitter.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/secondaryStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBdefs.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/dockResultFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/LigandFileSplitter.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/dockResultFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/LigandFileSplitter.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 62%] Linking CXX executable ../../../bin/TOOLS/LigandFileSplitter
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_link_script CMakeFiles/LigandFileSplitter.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/LigandFileSplitter.dir/LigandFileSplitter_autogen/mocs_compilation.cpp.o CMakeFiles/LigandFileSplitter.dir/LigandFileSplitter.C.o -o ../../../bin/TOOLS/LigandFileSplitter  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../../../lib/libBALL.so.1.5 /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 62%] Built target LigandFileSplitter
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/SimilarityAnalyzer_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/SimilarityAnalyzer_autogen.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/SimilarityAnalyzer_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target SimilarityAnalyzer_autogen
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/SimilarityAnalyzer_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/SimilarityAnalyzer_autogen.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 62%] Automatic MOC for target SimilarityAnalyzer
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/SimilarityAnalyzer_autogen.dir/AutogenInfo.json Release
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 62%] Built target SimilarityAnalyzer_autogen
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/SimilarityAnalyzer.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/SimilarityAnalyzer.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/SimilarityAnalyzer.dir/DependInfo.cmake --color=
Scanning dependencies of target SimilarityAnalyzer
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/SimilarityAnalyzer.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/SimilarityAnalyzer.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 62%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/SimilarityAnalyzer.dir/SimilarityAnalyzer_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/SimilarityAnalyzer_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/SimilarityAnalyzer.dir/SimilarityAnalyzer_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/SimilarityAnalyzer_autogen/mocs_compilation.cpp
[ 62%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/SimilarityAnalyzer.dir/SimilarityAnalyzer.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/SimilarityAnalyzer_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/SimilarityAnalyzer.dir/SimilarityAnalyzer.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/SimilarityAnalyzer.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/molecule.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/SimilarityAnalyzer.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/commandlineParser.h:4,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/SimilarityAnalyzer.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/molecule.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/SimilarityAnalyzer.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/commandlineParser.h:4,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/SimilarityAnalyzer.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/molecule.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/SimilarityAnalyzer.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/commandlineParser.h:4,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/SimilarityAnalyzer.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 62%] Linking CXX executable ../../../bin/TOOLS/SimilarityAnalyzer
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_link_script CMakeFiles/SimilarityAnalyzer.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/SimilarityAnalyzer.dir/SimilarityAnalyzer_autogen/mocs_compilation.cpp.o CMakeFiles/SimilarityAnalyzer.dir/SimilarityAnalyzer.C.o -o ../../../bin/TOOLS/SimilarityAnalyzer  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../../../lib/libBALL.so.1.5 /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 62%] Built target SimilarityAnalyzer
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/DockResultMerger_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/DockResultMerger_autogen.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/DockResultMerger_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target DockResultMerger_autogen
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/DockResultMerger_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/DockResultMerger_autogen.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 62%] Automatic MOC for target DockResultMerger
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/DockResultMerger_autogen.dir/AutogenInfo.json Release
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 62%] Built target DockResultMerger_autogen
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/DockResultMerger.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/DockResultMerger.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/DockResultMerger.dir/DependInfo.cmake --color=
Scanning dependencies of target DockResultMerger
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/DockResultMerger.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/DockResultMerger.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 62%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/DockResultMerger.dir/DockResultMerger_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/DockResultMerger_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/DockResultMerger.dir/DockResultMerger_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/DockResultMerger_autogen/mocs_compilation.cpp
[ 62%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/DockResultMerger.dir/DockResultMerger.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/DockResultMerger_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/DockResultMerger.dir/DockResultMerger.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/DockResultMerger.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/conformation.h:8,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/DockResultMerger.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/conformation.h:8,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/DockResultMerger.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/conformation.h:8,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/DockResultMerger.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/conformation.h:8,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/DockResultMerger.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/conformation.h:8,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/DockResultMerger.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/conformation.h:8,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/DockResultMerger.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 62%] Linking CXX executable ../../../bin/TOOLS/DockResultMerger
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_link_script CMakeFiles/DockResultMerger.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/DockResultMerger.dir/DockResultMerger_autogen/mocs_compilation.cpp.o CMakeFiles/DockResultMerger.dir/DockResultMerger.C.o -o ../../../bin/TOOLS/DockResultMerger  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../../../lib/libBALL.so.1.5 /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 62%] Built target DockResultMerger
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/LigCheck_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/LigCheck_autogen.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/LigCheck_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target LigCheck_autogen
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/LigCheck_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/LigCheck_autogen.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 62%] Automatic MOC for target LigCheck
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/LigCheck_autogen.dir/AutogenInfo.json Release
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 62%] Built target LigCheck_autogen
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/LigCheck.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/LigCheck.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/LigCheck.dir/DependInfo.cmake --color=
Scanning dependencies of target LigCheck
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/LigCheck.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/LigCheck.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 62%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/LigCheck.dir/LigCheck_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/LigCheck_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/LigCheck.dir/LigCheck_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/LigCheck_autogen/mocs_compilation.cpp
[ 62%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/LigCheck.dir/LigCheck.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/LigCheck_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/LigCheck.dir/LigCheck.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/LigCheck.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/secondaryStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBdefs.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/dockResultFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/LigCheck.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/dockResultFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/LigCheck.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/secondaryStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBdefs.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/dockResultFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/LigCheck.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/dockResultFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/LigCheck.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/secondaryStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBdefs.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/dockResultFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/LigCheck.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/dockResultFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/LigCheck.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/LigCheck.C: In function 'int main(int, char**)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/LigCheck.C:245:43: warning: catching polymorphic type 'class BALL::Exception::GeneralException' by value [-Wcatch-value=]
  245 |   catch(BALL::Exception::GeneralException e)
      |                                           ^
[ 62%] Linking CXX executable ../../../bin/TOOLS/LigCheck
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_link_script CMakeFiles/LigCheck.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/LigCheck.dir/LigCheck_autogen/mocs_compilation.cpp.o CMakeFiles/LigCheck.dir/LigCheck.C.o -o ../../../bin/TOOLS/LigCheck  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../../../lib/libBALL.so.1.5 /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 62%] Built target LigCheck
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/CombiLibGenerator_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/CombiLibGenerator_autogen.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/CombiLibGenerator_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target CombiLibGenerator_autogen
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/CombiLibGenerator_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/CombiLibGenerator_autogen.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 62%] Automatic MOC for target CombiLibGenerator
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/CombiLibGenerator_autogen.dir/AutogenInfo.json Release
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 62%] Built target CombiLibGenerator_autogen
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/CombiLibGenerator.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/CombiLibGenerator.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/CombiLibGenerator.dir/DependInfo.cmake --color=
Scanning dependencies of target CombiLibGenerator
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/CombiLibGenerator.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/CombiLibGenerator.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 62%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/CombiLibGenerator.dir/CombiLibGenerator_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CombiLibGenerator_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/CombiLibGenerator.dir/CombiLibGenerator_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CombiLibGenerator_autogen/mocs_compilation.cpp
[ 62%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/CombiLibGenerator.dir/CombiLibGenerator.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CombiLibGenerator_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/CombiLibGenerator.dir/CombiLibGenerator.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/CombiLibGenerator.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/smilesParser.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/rGroupAssembler.h:12,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/CombiLibGenerator.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/smilesParser.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/rGroupAssembler.h:12,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/CombiLibGenerator.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/smilesParser.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/rGroupAssembler.h:12,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/CombiLibGenerator.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/smilesParser.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/rGroupAssembler.h:12,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/CombiLibGenerator.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/smilesParser.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/rGroupAssembler.h:12,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/CombiLibGenerator.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/smilesParser.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/rGroupAssembler.h:12,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/CombiLibGenerator.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/CombiLibGenerator.C: In function 'void readFile(BALL::String)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/CombiLibGenerator.C:104:5: warning: this statement may fall through [-Wimplicit-fallthrough=]
  104 |     }
      |     ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/CombiLibGenerator.C:105:4: note: here
  105 |    default:
      |    ^~~~~~~
[ 64%] Linking CXX executable ../../../bin/TOOLS/CombiLibGenerator
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_link_script CMakeFiles/CombiLibGenerator.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/CombiLibGenerator.dir/CombiLibGenerator_autogen/mocs_compilation.cpp.o CMakeFiles/CombiLibGenerator.dir/CombiLibGenerator.C.o -o ../../../bin/TOOLS/CombiLibGenerator  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../../../lib/libBALL.so.1.5 /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 64%] Built target CombiLibGenerator
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/AntitargetRescorer_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/AntitargetRescorer_autogen.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/AntitargetRescorer_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target AntitargetRescorer_autogen
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/AntitargetRescorer_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/AntitargetRescorer_autogen.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 64%] Automatic MOC for target AntitargetRescorer
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/AntitargetRescorer_autogen.dir/AutogenInfo.json Release
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 64%] Built target AntitargetRescorer_autogen
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/AntitargetRescorer.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/AntitargetRescorer.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/AntitargetRescorer.dir/DependInfo.cmake --color=
Scanning dependencies of target AntitargetRescorer
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make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 64%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/AntitargetRescorer.dir/AntitargetRescorer_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/AntitargetRescorer_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/AntitargetRescorer.dir/AntitargetRescorer_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/AntitargetRescorer_autogen/mocs_compilation.cpp
[ 64%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/AntitargetRescorer.dir/AntitargetRescorer.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/AntitargetRescorer_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/AntitargetRescorer.dir/AntitargetRescorer.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/AntitargetRescorer.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/molecule.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/AntitargetRescorer.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/molecule.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/AntitargetRescorer.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/molecule.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/AntitargetRescorer.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/molecule.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/AntitargetRescorer.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/molecule.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/AntitargetRescorer.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/molecule.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/AntitargetRescorer.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 64%] Linking CXX executable ../../../bin/TOOLS/AntitargetRescorer
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_link_script CMakeFiles/AntitargetRescorer.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/AntitargetRescorer.dir/AntitargetRescorer_autogen/mocs_compilation.cpp.o CMakeFiles/AntitargetRescorer.dir/AntitargetRescorer.C.o -o ../../../bin/TOOLS/AntitargetRescorer  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../../../lib/libBALL.so.1.5 /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 64%] Built target AntitargetRescorer
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/Validator_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/Validator_autogen.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/Validator_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target Validator_autogen
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/Validator_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/Validator_autogen.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 64%] Automatic MOC for target Validator
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/Validator_autogen.dir/AutogenInfo.json Release
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 64%] Built target Validator_autogen
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/Validator.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/Validator.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/Validator.dir/DependInfo.cmake --color=
Scanning dependencies of target Validator
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make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 64%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/Validator.dir/Validator_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/Validator_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/Validator.dir/Validator_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/Validator_autogen/mocs_compilation.cpp
[ 66%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/Validator.dir/Validator.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/Validator_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/Validator.dir/Validator.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/Validator.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/modelFactory.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/registry.h:5,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/Validator.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/commandlineParser.h:4,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/Validator.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/modelFactory.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/registry.h:5,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/Validator.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/commandlineParser.h:4,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/Validator.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/modelFactory.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/registry.h:5,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/Validator.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/commandlineParser.h:4,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/Validator.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 66%] Linking CXX executable ../../../bin/TOOLS/Validator
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_link_script CMakeFiles/Validator.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Validator.dir/Validator_autogen/mocs_compilation.cpp.o CMakeFiles/Validator.dir/Validator.C.o -o ../../../bin/TOOLS/Validator  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../../../lib/libBALL.so.1.5 /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 66%] Built target Validator
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/BindingDBCleaner_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/BindingDBCleaner_autogen.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/BindingDBCleaner_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target BindingDBCleaner_autogen
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/BindingDBCleaner_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/BindingDBCleaner_autogen.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 66%] Automatic MOC for target BindingDBCleaner
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/BindingDBCleaner_autogen.dir/AutogenInfo.json Release
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 66%] Built target BindingDBCleaner_autogen
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/BindingDBCleaner.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/BindingDBCleaner.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/BindingDBCleaner.dir/DependInfo.cmake --color=
Scanning dependencies of target BindingDBCleaner
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/BindingDBCleaner.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/BindingDBCleaner.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 67%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/BindingDBCleaner.dir/BindingDBCleaner_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/BindingDBCleaner_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/BindingDBCleaner.dir/BindingDBCleaner_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/BindingDBCleaner_autogen/mocs_compilation.cpp
[ 67%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/BindingDBCleaner.dir/BindingDBCleaner.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/BindingDBCleaner_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/BindingDBCleaner.dir/BindingDBCleaner.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/BindingDBCleaner.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/molecule.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/BindingDBCleaner.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/molecule.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/BindingDBCleaner.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/molecule.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/BindingDBCleaner.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/molecule.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/BindingDBCleaner.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/molecule.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/BindingDBCleaner.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/molecule.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/BindingDBCleaner.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 67%] Linking CXX executable ../../../bin/TOOLS/BindingDBCleaner
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_link_script CMakeFiles/BindingDBCleaner.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/BindingDBCleaner.dir/BindingDBCleaner_autogen/mocs_compilation.cpp.o CMakeFiles/BindingDBCleaner.dir/BindingDBCleaner.C.o -o ../../../bin/TOOLS/BindingDBCleaner  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../../../lib/libBALL.so.1.5 /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 67%] Built target BindingDBCleaner
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/ProteinCheck_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/ProteinCheck_autogen.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/ProteinCheck_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target ProteinCheck_autogen
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/ProteinCheck_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/ProteinCheck_autogen.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 67%] Automatic MOC for target ProteinCheck
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/ProteinCheck_autogen.dir/AutogenInfo.json Release
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 67%] Built target ProteinCheck_autogen
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/ProteinCheck.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/ProteinCheck.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/ProteinCheck.dir/DependInfo.cmake --color=
Scanning dependencies of target ProteinCheck
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/ProteinCheck.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/ProteinCheck.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 67%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/ProteinCheck.dir/ProteinCheck_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/ProteinCheck_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/ProteinCheck.dir/ProteinCheck_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/ProteinCheck_autogen/mocs_compilation.cpp
[ 67%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/ProteinCheck.dir/ProteinCheck.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/ProteinCheck_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/ProteinCheck.dir/ProteinCheck.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/ProteinCheck.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/secondaryStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBdefs.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/ProteinCheck.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/ProteinCheck.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/secondaryStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBdefs.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/ProteinCheck.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/ProteinCheck.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/secondaryStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBdefs.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/ProteinCheck.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/ProteinCheck.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/ProteinCheck.C: In function 'bool checkProtein(BALL::Protein*, bool)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/ProteinCheck.C:275:44: warning: catching polymorphic type 'class BALL::Exception::GeneralException' by value [-Wcatch-value=]
  275 |    catch(BALL::Exception::GeneralException e) {}
      |                                            ^
[ 67%] Linking CXX executable ../../../bin/TOOLS/ProteinCheck
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_link_script CMakeFiles/ProteinCheck.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/ProteinCheck.dir/ProteinCheck_autogen/mocs_compilation.cpp.o CMakeFiles/ProteinCheck.dir/ProteinCheck.C.o -o ../../../bin/TOOLS/ProteinCheck  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../../../lib/libBALL.so.1.5 /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 67%] Built target ProteinCheck
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/AutoModel_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/AutoModel_autogen.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/AutoModel_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target AutoModel_autogen
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/AutoModel_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/AutoModel_autogen.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 67%] Automatic MOC for target AutoModel
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/AutoModel_autogen.dir/AutogenInfo.json Release
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 67%] Built target AutoModel_autogen
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/AutoModel.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/AutoModel.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/AutoModel.dir/DependInfo.cmake --color=
Scanning dependencies of target AutoModel
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/AutoModel.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/AutoModel.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 67%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/AutoModel.dir/AutoModel_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/AutoModel_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/AutoModel.dir/AutoModel_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/AutoModel_autogen/mocs_compilation.cpp
[ 67%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/AutoModel.dir/AutoModel.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/AutoModel_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/AutoModel.dir/AutoModel.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/AutoModel.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/automaticModelCreator.h:2,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/AutoModel.C:2:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/commandlineParser.h:4,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/AutoModel.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/automaticModelCreator.h:2,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/AutoModel.C:2:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/commandlineParser.h:4,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/AutoModel.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/automaticModelCreator.h:2,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/AutoModel.C:2:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/commandlineParser.h:4,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/AutoModel.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 67%] Linking CXX executable ../../../bin/TOOLS/AutoModel
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_link_script CMakeFiles/AutoModel.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/AutoModel.dir/AutoModel_autogen/mocs_compilation.cpp.o CMakeFiles/AutoModel.dir/AutoModel.C.o -o ../../../bin/TOOLS/AutoModel  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../../../lib/libBALL.so.1.5 /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 67%] Built target AutoModel
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/CrystalGenerator_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/CrystalGenerator_autogen.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/CrystalGenerator_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target CrystalGenerator_autogen
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/CrystalGenerator_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/CrystalGenerator_autogen.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 69%] Automatic MOC for target CrystalGenerator
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/CrystalGenerator_autogen.dir/AutogenInfo.json Release
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 69%] Built target CrystalGenerator_autogen
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/CrystalGenerator.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/CrystalGenerator.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/CrystalGenerator.dir/DependInfo.cmake --color=
Scanning dependencies of target CrystalGenerator
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
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make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 69%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/CrystalGenerator.dir/CrystalGenerator_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CrystalGenerator_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/CrystalGenerator.dir/CrystalGenerator_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CrystalGenerator_autogen/mocs_compilation.cpp
[ 69%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/CrystalGenerator.dir/CrystalGenerator.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CrystalGenerator_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/CrystalGenerator.dir/CrystalGenerator.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/CrystalGenerator.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/XRAY/crystalGenerator.h:8,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/CrystalGenerator.C:14:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/XRAY/crystalGenerator.h:8,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/CrystalGenerator.C:14:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/XRAY/crystalGenerator.h:8,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/CrystalGenerator.C:14:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/XRAY/crystalGenerator.h:8,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/CrystalGenerator.C:14:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/XRAY/crystalGenerator.h:8,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/CrystalGenerator.C:14:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/XRAY/crystalGenerator.h:8,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/CrystalGenerator.C:14:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 69%] Linking CXX executable ../../../bin/TOOLS/CrystalGenerator
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_link_script CMakeFiles/CrystalGenerator.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/CrystalGenerator.dir/CrystalGenerator_autogen/mocs_compilation.cpp.o CMakeFiles/CrystalGenerator.dir/CrystalGenerator.C.o -o ../../../bin/TOOLS/CrystalGenerator  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../../../lib/libBALL.so.1.5 /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 69%] Built target CrystalGenerator
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/BondOrderAssigner_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/BondOrderAssigner_autogen.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/BondOrderAssigner_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target BondOrderAssigner_autogen
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/BondOrderAssigner_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/BondOrderAssigner_autogen.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 71%] Automatic MOC for target BondOrderAssigner
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/BondOrderAssigner_autogen.dir/AutogenInfo.json Release
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 71%] Built target BondOrderAssigner_autogen
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/BondOrderAssigner.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/BondOrderAssigner.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/BondOrderAssigner.dir/DependInfo.cmake --color=
Scanning dependencies of target BondOrderAssigner
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/BondOrderAssigner.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/BondOrderAssigner.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 71%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/BondOrderAssigner.dir/BondOrderAssigner_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/BondOrderAssigner_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/BondOrderAssigner.dir/BondOrderAssigner_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/BondOrderAssigner_autogen/mocs_compilation.cpp
[ 71%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/BondOrderAssigner.dir/BondOrderAssigner.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/BondOrderAssigner_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/BondOrderAssigner.dir/BondOrderAssigner.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/BondOrderAssigner.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/assignBondOrderProcessor.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/BondOrderAssigner.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/assignBondOrderProcessor.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/BondOrderAssigner.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/assignBondOrderProcessor.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/BondOrderAssigner.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/assignBondOrderProcessor.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/BondOrderAssigner.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/assignBondOrderProcessor.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/BondOrderAssigner.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/assignBondOrderProcessor.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/BondOrderAssigner.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 71%] Linking CXX executable ../../../bin/TOOLS/BondOrderAssigner
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_link_script CMakeFiles/BondOrderAssigner.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/BondOrderAssigner.dir/BondOrderAssigner_autogen/mocs_compilation.cpp.o CMakeFiles/BondOrderAssigner.dir/BondOrderAssigner.C.o -o ../../../bin/TOOLS/BondOrderAssigner  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../../../lib/libBALL.so.1.5 /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 71%] Built target BondOrderAssigner
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/ConstraintsFinder_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/ConstraintsFinder_autogen.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/ConstraintsFinder_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target ConstraintsFinder_autogen
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/ConstraintsFinder_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/ConstraintsFinder_autogen.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 71%] Automatic MOC for target ConstraintsFinder
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/ConstraintsFinder_autogen.dir/AutogenInfo.json Release
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 71%] Built target ConstraintsFinder_autogen
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/ConstraintsFinder.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/ConstraintsFinder.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/ConstraintsFinder.dir/DependInfo.cmake --color=
Scanning dependencies of target ConstraintsFinder
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/ConstraintsFinder.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/ConstraintsFinder.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 71%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/ConstraintsFinder.dir/ConstraintsFinder_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/ConstraintsFinder_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/ConstraintsFinder.dir/ConstraintsFinder_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/ConstraintsFinder_autogen/mocs_compilation.cpp
[ 71%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/ConstraintsFinder.dir/ConstraintsFinder.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/ConstraintsFinder_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/ConstraintsFinder.dir/ConstraintsFinder.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/ConstraintsFinder.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/secondaryStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBdefs.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/ConstraintsFinder.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/ConstraintsFinder.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/secondaryStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBdefs.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/ConstraintsFinder.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/ConstraintsFinder.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/secondaryStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBdefs.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/ConstraintsFinder.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/ConstraintsFinder.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/ConstraintsFinder.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94ParametersBase::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:43:3: note: in expansion of macro 'BALL_CREATE'
   43 |   BALL_CREATE(MMFF94ParametersBase)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/PLPScoring.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/ConstraintsFinder.C:15:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/ConstraintsFinder.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:3: note: in expansion of macro 'BALL_CREATE'
  217 |   BALL_CREATE(MMFF94StretchParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/PLPScoring.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/ConstraintsFinder.C:15:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:226:34: note: because 'BALL::MMFF94StretchParameters' has user-provided 'const BALL::MMFF94StretchParameters& BALL::MMFF94StretchParameters::operator=(const BALL::MMFF94StretchParameters&)'
  226 |   const MMFF94StretchParameters& operator = (const MMFF94StretchParameters& param)
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:185:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  185 |  class BALL_EXPORT MMFF94StretchParameters:
      |                    ^~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/ConstraintsFinder.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:3: note: in expansion of macro 'BALL_CREATE'
  217 |   BALL_CREATE(MMFF94StretchParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94BendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:3: note: in expansion of macro 'BALL_CREATE'
  271 |   BALL_CREATE(MMFF94BendParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/PLPScoring.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/ConstraintsFinder.C:15:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:280:31: note: because 'BALL::MMFF94BendParameters' has user-provided 'const BALL::MMFF94BendParameters& BALL::MMFF94BendParameters::operator=(const BALL::MMFF94BendParameters&)'
  280 |   const MMFF94BendParameters& operator = (const MMFF94BendParameters& param)
      |                               ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:263:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  263 |  class BALL_EXPORT MMFF94BendParameters
      |                    ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/ConstraintsFinder.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94BendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:3: note: in expansion of macro 'BALL_CREATE'
  271 |   BALL_CREATE(MMFF94BendParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:3: note: in expansion of macro 'BALL_CREATE'
  318 |   BALL_CREATE(MMFF94StretchBendParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/PLPScoring.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/ConstraintsFinder.C:15:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:327:38: note: because 'BALL::MMFF94StretchBendParameters' has user-provided 'const BALL::MMFF94StretchBendParameters& BALL::MMFF94StretchBendParameters::operator=(const BALL::MMFF94StretchBendParameters&)'
  327 |   const MMFF94StretchBendParameters& operator = (const MMFF94StretchBendParameters& param)
      |                                      ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:310:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  310 |  class BALL_EXPORT MMFF94StretchBendParameters
      |                    ^~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/ConstraintsFinder.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:3: note: in expansion of macro 'BALL_CREATE'
  318 |   BALL_CREATE(MMFF94StretchBendParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:3: note: in expansion of macro 'BALL_CREATE'
  374 |   BALL_CREATE(MMFF94TorsionParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/PLPScoring.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/ConstraintsFinder.C:15:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:383:34: note: because 'BALL::MMFF94TorsionParameters' has user-provided 'const BALL::MMFF94TorsionParameters& BALL::MMFF94TorsionParameters::operator=(const BALL::MMFF94TorsionParameters&)'
  383 |   const MMFF94TorsionParameters& operator = (const MMFF94TorsionParameters& param)
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:366:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  366 |  class BALL_EXPORT MMFF94TorsionParameters
      |                    ^~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/ConstraintsFinder.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:3: note: in expansion of macro 'BALL_CREATE'
  374 |   BALL_CREATE(MMFF94TorsionParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:3: note: in expansion of macro 'BALL_CREATE'
  422 |   BALL_CREATE(MMFF94PlaneParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/PLPScoring.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/ConstraintsFinder.C:15:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:431:32: note: because 'BALL::MMFF94PlaneParameters' has user-provided 'const BALL::MMFF94PlaneParameters& BALL::MMFF94PlaneParameters::operator=(const BALL::MMFF94PlaneParameters&)'
  431 |   const MMFF94PlaneParameters& operator = (const MMFF94PlaneParameters& param)
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:414:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  414 |  class BALL_EXPORT MMFF94PlaneParameters
      |                    ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/ConstraintsFinder.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:3: note: in expansion of macro 'BALL_CREATE'
  422 |   BALL_CREATE(MMFF94PlaneParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:3: note: in expansion of macro 'BALL_CREATE'
  473 |   BALL_CREATE(MMFF94VDWParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/PLPScoring.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/ConstraintsFinder.C:15:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:482:30: note: because 'BALL::MMFF94VDWParameters' has user-provided 'const BALL::MMFF94VDWParameters& BALL::MMFF94VDWParameters::operator=(const BALL::MMFF94VDWParameters&)'
  482 |   const MMFF94VDWParameters& operator = (const MMFF94VDWParameters& param)
      |                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:458:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  458 |  class BALL_EXPORT MMFF94VDWParameters
      |                    ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/ConstraintsFinder.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:3: note: in expansion of macro 'BALL_CREATE'
  473 |   BALL_CREATE(MMFF94VDWParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94ESParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:3: note: in expansion of macro 'BALL_CREATE'
  530 |   BALL_CREATE(MMFF94ESParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/PLPScoring.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/ConstraintsFinder.C:15:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:539:29: note: because 'BALL::MMFF94ESParameters' has user-provided 'const BALL::MMFF94ESParameters& BALL::MMFF94ESParameters::operator=(const BALL::MMFF94ESParameters&)'
  539 |   const MMFF94ESParameters& operator = (const MMFF94ESParameters& param)
      |                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:525:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  525 |  class BALL_EXPORT MMFF94ESParameters
      |                    ^~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/ConstraintsFinder.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94ESParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:3: note: in expansion of macro 'BALL_CREATE'
  530 |   BALL_CREATE(MMFF94ESParameters)
      |   ^~~~~~~~~~~
[ 71%] Linking CXX executable ../../../bin/TOOLS/ConstraintsFinder
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_link_script CMakeFiles/ConstraintsFinder.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/ConstraintsFinder.dir/ConstraintsFinder_autogen/mocs_compilation.cpp.o CMakeFiles/ConstraintsFinder.dir/ConstraintsFinder.C.o -o ../../../bin/TOOLS/ConstraintsFinder  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../../../lib/libBALL.so.1.5 /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 71%] Built target ConstraintsFinder
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/ModelCreator_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/ModelCreator_autogen.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/ModelCreator_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target ModelCreator_autogen
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/ModelCreator_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/ModelCreator_autogen.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 71%] Automatic MOC for target ModelCreator
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/ModelCreator_autogen.dir/AutogenInfo.json Release
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 71%] Built target ModelCreator_autogen
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/ModelCreator.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/ModelCreator.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/ModelCreator.dir/DependInfo.cmake --color=
Scanning dependencies of target ModelCreator
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/ModelCreator.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/ModelCreator.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 71%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/ModelCreator.dir/ModelCreator_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/ModelCreator_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/ModelCreator.dir/ModelCreator_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/ModelCreator_autogen/mocs_compilation.cpp
[ 71%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/ModelCreator.dir/ModelCreator.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/ModelCreator_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/ModelCreator.dir/ModelCreator.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/ModelCreator.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/modelFactory.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/registry.h:5,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/ModelCreator.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/commandlineParser.h:4,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/ModelCreator.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/modelFactory.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/registry.h:5,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/ModelCreator.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/commandlineParser.h:4,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/ModelCreator.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/modelFactory.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/registry.h:5,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/ModelCreator.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/commandlineParser.h:4,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/ModelCreator.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/ModelCreator.C: In function 'void startModelCreation(BALL::QSAR::ModelConfiguration&, BALL::QSAR::QSARData*, BALL::String*)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/ModelCreator.C:101:43: warning: catching polymorphic type 'class BALL::Exception::GeneralException' by value [-Wcatch-value=]
  101 |   catch(BALL::Exception::GeneralException e)
      |                                           ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/ModelCreator.C: In function 'int main(int, char**)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/ModelCreator.C:156:42: warning: catching polymorphic type 'class BALL::Exception::GeneralException' by value [-Wcatch-value=]
  156 |  catch(BALL::Exception::GeneralException e)
      |                                          ^
[ 71%] Linking CXX executable ../../../bin/TOOLS/ModelCreator
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_link_script CMakeFiles/ModelCreator.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/ModelCreator.dir/ModelCreator_autogen/mocs_compilation.cpp.o CMakeFiles/ModelCreator.dir/ModelCreator.C.o -o ../../../bin/TOOLS/ModelCreator  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../../../lib/libBALL.so.1.5 /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 71%] Built target ModelCreator
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/PeptideBuilder_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/PeptideBuilder_autogen.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/PeptideBuilder_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target PeptideBuilder_autogen
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/PeptideBuilder_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/PeptideBuilder_autogen.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 71%] Automatic MOC for target PeptideBuilder
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/PeptideBuilder_autogen.dir/AutogenInfo.json Release
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 71%] Built target PeptideBuilder_autogen
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/PeptideBuilder.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/PeptideBuilder.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/PeptideBuilder.dir/DependInfo.cmake --color=
Scanning dependencies of target PeptideBuilder
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/PeptideBuilder.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/PeptideBuilder.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 71%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/PeptideBuilder.dir/PeptideBuilder_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/PeptideBuilder_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/PeptideBuilder.dir/PeptideBuilder_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/PeptideBuilder_autogen/mocs_compilation.cpp
[ 73%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/PeptideBuilder.dir/PeptideBuilder.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/PeptideBuilder_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/PeptideBuilder.dir/PeptideBuilder.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/PeptideBuilder.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/secondaryStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBdefs.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/PeptideBuilder.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/PeptideBuilder.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/secondaryStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBdefs.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/PeptideBuilder.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/PeptideBuilder.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/secondaryStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBdefs.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/PeptideBuilder.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/PeptideBuilder.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 73%] Linking CXX executable ../../../bin/TOOLS/PeptideBuilder
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_link_script CMakeFiles/PeptideBuilder.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/PeptideBuilder.dir/PeptideBuilder_autogen/mocs_compilation.cpp.o CMakeFiles/PeptideBuilder.dir/PeptideBuilder.C.o -o ../../../bin/TOOLS/PeptideBuilder  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../../../lib/libBALL.so.1.5 /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 73%] Built target PeptideBuilder
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/FeatureSelector_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/FeatureSelector_autogen.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/FeatureSelector_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target FeatureSelector_autogen
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/FeatureSelector_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/FeatureSelector_autogen.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 73%] Automatic MOC for target FeatureSelector
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/FeatureSelector_autogen.dir/AutogenInfo.json Release
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 73%] Built target FeatureSelector_autogen
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/FeatureSelector.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/FeatureSelector.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/FeatureSelector.dir/DependInfo.cmake --color=
Scanning dependencies of target FeatureSelector
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/FeatureSelector.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/FeatureSelector.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 75%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/FeatureSelector.dir/FeatureSelector_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/FeatureSelector_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/FeatureSelector.dir/FeatureSelector_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/FeatureSelector_autogen/mocs_compilation.cpp
[ 75%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/FeatureSelector.dir/FeatureSelector.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/FeatureSelector_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/FeatureSelector.dir/FeatureSelector.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/FeatureSelector.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/modelFactory.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/registry.h:5,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/FeatureSelector.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/commandlineParser.h:4,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/FeatureSelector.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/modelFactory.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/registry.h:5,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/FeatureSelector.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/commandlineParser.h:4,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/FeatureSelector.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/modelFactory.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/registry.h:5,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/FeatureSelector.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/commandlineParser.h:4,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/FeatureSelector.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/FeatureSelector.C: In function 'void startFeatureSelection(BALL::QSAR::FeatureSelectionConfiguration&, BALL::QSAR::QSARData*, BALL::String*)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/FeatureSelector.C:122:43: warning: catching polymorphic type 'class BALL::Exception::GeneralException' by value [-Wcatch-value=]
  122 |   catch(BALL::Exception::GeneralException e)
      |                                           ^
[ 75%] Linking CXX executable ../../../bin/TOOLS/FeatureSelector
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_link_script CMakeFiles/FeatureSelector.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/FeatureSelector.dir/FeatureSelector_autogen/mocs_compilation.cpp.o CMakeFiles/FeatureSelector.dir/FeatureSelector.C.o -o ../../../bin/TOOLS/FeatureSelector  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../../../lib/libBALL.so.1.5 /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 75%] Built target FeatureSelector
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/SimpleRescorer_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/SimpleRescorer_autogen.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/SimpleRescorer_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target SimpleRescorer_autogen
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/SimpleRescorer_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/SimpleRescorer_autogen.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 75%] Automatic MOC for target SimpleRescorer
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/SimpleRescorer_autogen.dir/AutogenInfo.json Release
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 75%] Built target SimpleRescorer_autogen
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/SimpleRescorer.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/SimpleRescorer.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/SimpleRescorer.dir/DependInfo.cmake --color=
Scanning dependencies of target SimpleRescorer
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/SimpleRescorer.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/SimpleRescorer.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 75%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/SimpleRescorer.dir/SimpleRescorer_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/SimpleRescorer_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/SimpleRescorer.dir/SimpleRescorer_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/SimpleRescorer_autogen/mocs_compilation.cpp
[ 75%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/SimpleRescorer.dir/SimpleRescorer.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/SimpleRescorer_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/SimpleRescorer.dir/SimpleRescorer.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/SimpleRescorer.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/secondaryStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBdefs.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/dockResultFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/SimpleRescorer.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/dockResultFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/SimpleRescorer.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/secondaryStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBdefs.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/dockResultFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/SimpleRescorer.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/dockResultFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/SimpleRescorer.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/secondaryStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBdefs.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/dockResultFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/SimpleRescorer.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/dockResultFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/SimpleRescorer.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/string.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SYSTEM/file.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/molFileFactory.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/SimpleRescorer.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94ParametersBase::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:43:3: note: in expansion of macro 'BALL_CREATE'
   43 |   BALL_CREATE(MMFF94ParametersBase)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/gridedPLP.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/SimpleRescorer.C:13:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/string.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SYSTEM/file.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/molFileFactory.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/SimpleRescorer.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:3: note: in expansion of macro 'BALL_CREATE'
  217 |   BALL_CREATE(MMFF94StretchParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/gridedPLP.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/SimpleRescorer.C:13:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:226:34: note: because 'BALL::MMFF94StretchParameters' has user-provided 'const BALL::MMFF94StretchParameters& BALL::MMFF94StretchParameters::operator=(const BALL::MMFF94StretchParameters&)'
  226 |   const MMFF94StretchParameters& operator = (const MMFF94StretchParameters& param)
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:185:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  185 |  class BALL_EXPORT MMFF94StretchParameters:
      |                    ^~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/string.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SYSTEM/file.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/molFileFactory.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/SimpleRescorer.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:3: note: in expansion of macro 'BALL_CREATE'
  217 |   BALL_CREATE(MMFF94StretchParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94BendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:3: note: in expansion of macro 'BALL_CREATE'
  271 |   BALL_CREATE(MMFF94BendParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/gridedPLP.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/SimpleRescorer.C:13:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:280:31: note: because 'BALL::MMFF94BendParameters' has user-provided 'const BALL::MMFF94BendParameters& BALL::MMFF94BendParameters::operator=(const BALL::MMFF94BendParameters&)'
  280 |   const MMFF94BendParameters& operator = (const MMFF94BendParameters& param)
      |                               ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:263:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  263 |  class BALL_EXPORT MMFF94BendParameters
      |                    ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/string.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SYSTEM/file.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/molFileFactory.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/SimpleRescorer.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94BendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:3: note: in expansion of macro 'BALL_CREATE'
  271 |   BALL_CREATE(MMFF94BendParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:3: note: in expansion of macro 'BALL_CREATE'
  318 |   BALL_CREATE(MMFF94StretchBendParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/gridedPLP.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/SimpleRescorer.C:13:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:327:38: note: because 'BALL::MMFF94StretchBendParameters' has user-provided 'const BALL::MMFF94StretchBendParameters& BALL::MMFF94StretchBendParameters::operator=(const BALL::MMFF94StretchBendParameters&)'
  327 |   const MMFF94StretchBendParameters& operator = (const MMFF94StretchBendParameters& param)
      |                                      ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:310:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  310 |  class BALL_EXPORT MMFF94StretchBendParameters
      |                    ^~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/string.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SYSTEM/file.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/molFileFactory.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/SimpleRescorer.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:3: note: in expansion of macro 'BALL_CREATE'
  318 |   BALL_CREATE(MMFF94StretchBendParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:3: note: in expansion of macro 'BALL_CREATE'
  374 |   BALL_CREATE(MMFF94TorsionParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/gridedPLP.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/SimpleRescorer.C:13:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:383:34: note: because 'BALL::MMFF94TorsionParameters' has user-provided 'const BALL::MMFF94TorsionParameters& BALL::MMFF94TorsionParameters::operator=(const BALL::MMFF94TorsionParameters&)'
  383 |   const MMFF94TorsionParameters& operator = (const MMFF94TorsionParameters& param)
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:366:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  366 |  class BALL_EXPORT MMFF94TorsionParameters
      |                    ^~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/string.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SYSTEM/file.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/molFileFactory.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/SimpleRescorer.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:3: note: in expansion of macro 'BALL_CREATE'
  374 |   BALL_CREATE(MMFF94TorsionParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:3: note: in expansion of macro 'BALL_CREATE'
  422 |   BALL_CREATE(MMFF94PlaneParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/gridedPLP.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/SimpleRescorer.C:13:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:431:32: note: because 'BALL::MMFF94PlaneParameters' has user-provided 'const BALL::MMFF94PlaneParameters& BALL::MMFF94PlaneParameters::operator=(const BALL::MMFF94PlaneParameters&)'
  431 |   const MMFF94PlaneParameters& operator = (const MMFF94PlaneParameters& param)
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:414:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  414 |  class BALL_EXPORT MMFF94PlaneParameters
      |                    ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/string.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SYSTEM/file.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/molFileFactory.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/SimpleRescorer.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:3: note: in expansion of macro 'BALL_CREATE'
  422 |   BALL_CREATE(MMFF94PlaneParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:3: note: in expansion of macro 'BALL_CREATE'
  473 |   BALL_CREATE(MMFF94VDWParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/gridedPLP.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/SimpleRescorer.C:13:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:482:30: note: because 'BALL::MMFF94VDWParameters' has user-provided 'const BALL::MMFF94VDWParameters& BALL::MMFF94VDWParameters::operator=(const BALL::MMFF94VDWParameters&)'
  482 |   const MMFF94VDWParameters& operator = (const MMFF94VDWParameters& param)
      |                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:458:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  458 |  class BALL_EXPORT MMFF94VDWParameters
      |                    ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/string.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SYSTEM/file.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/molFileFactory.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/SimpleRescorer.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:3: note: in expansion of macro 'BALL_CREATE'
  473 |   BALL_CREATE(MMFF94VDWParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94ESParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:3: note: in expansion of macro 'BALL_CREATE'
  530 |   BALL_CREATE(MMFF94ESParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/gridedPLP.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/SimpleRescorer.C:13:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:539:29: note: because 'BALL::MMFF94ESParameters' has user-provided 'const BALL::MMFF94ESParameters& BALL::MMFF94ESParameters::operator=(const BALL::MMFF94ESParameters&)'
  539 |   const MMFF94ESParameters& operator = (const MMFF94ESParameters& param)
      |                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:525:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  525 |  class BALL_EXPORT MMFF94ESParameters
      |                    ^~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/string.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SYSTEM/file.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/molFileFactory.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/SimpleRescorer.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94ESParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:3: note: in expansion of macro 'BALL_CREATE'
  530 |   BALL_CREATE(MMFF94ESParameters)
      |   ^~~~~~~~~~~
[ 75%] Linking CXX executable ../../../bin/TOOLS/SimpleRescorer
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_link_script CMakeFiles/SimpleRescorer.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/SimpleRescorer.dir/SimpleRescorer_autogen/mocs_compilation.cpp.o CMakeFiles/SimpleRescorer.dir/SimpleRescorer.C.o -o ../../../bin/TOOLS/SimpleRescorer  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../../../lib/libBALL.so.1.5 /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 75%] Built target SimpleRescorer
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/CalculateBindingFreeEnergy_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/CalculateBindingFreeEnergy_autogen.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/CalculateBindingFreeEnergy_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target CalculateBindingFreeEnergy_autogen
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/CalculateBindingFreeEnergy_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/CalculateBindingFreeEnergy_autogen.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 75%] Automatic MOC for target CalculateBindingFreeEnergy
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/CalculateBindingFreeEnergy_autogen.dir/AutogenInfo.json Release
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 75%] Built target CalculateBindingFreeEnergy_autogen
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/CalculateBindingFreeEnergy.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/CalculateBindingFreeEnergy.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/CalculateBindingFreeEnergy.dir/DependInfo.cmake --color=
Scanning dependencies of target CalculateBindingFreeEnergy
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/CalculateBindingFreeEnergy.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/CalculateBindingFreeEnergy.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 75%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/CalculateBindingFreeEnergy.dir/CalculateBindingFreeEnergy_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CalculateBindingFreeEnergy_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/CalculateBindingFreeEnergy.dir/CalculateBindingFreeEnergy_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CalculateBindingFreeEnergy_autogen/mocs_compilation.cpp
[ 75%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/CalculateBindingFreeEnergy.dir/CalculateBindingFreeEnergy.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CalculateBindingFreeEnergy_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/CalculateBindingFreeEnergy.dir/CalculateBindingFreeEnergy.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/CalculateBindingFreeEnergy.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceField.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/AMBER/amber.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/CalculateBindingFreeEnergy.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceField.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/AMBER/amber.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/CalculateBindingFreeEnergy.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceField.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/AMBER/amber.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/CalculateBindingFreeEnergy.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceField.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/AMBER/amber.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/CalculateBindingFreeEnergy.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceField.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/AMBER/amber.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/CalculateBindingFreeEnergy.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceField.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/AMBER/amber.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/CalculateBindingFreeEnergy.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 75%] Linking CXX executable ../../../bin/TOOLS/CalculateBindingFreeEnergy
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_link_script CMakeFiles/CalculateBindingFreeEnergy.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/CalculateBindingFreeEnergy.dir/CalculateBindingFreeEnergy_autogen/mocs_compilation.cpp.o CMakeFiles/CalculateBindingFreeEnergy.dir/CalculateBindingFreeEnergy.C.o -o ../../../bin/TOOLS/CalculateBindingFreeEnergy  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../../../lib/libBALL.so.1.5 /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 75%] Built target CalculateBindingFreeEnergy
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/PDBCutter_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/PDBCutter_autogen.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/PDBCutter_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target PDBCutter_autogen
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/PDBCutter_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/PDBCutter_autogen.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 75%] Automatic MOC for target PDBCutter
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/PDBCutter_autogen.dir/AutogenInfo.json Release
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 75%] Built target PDBCutter_autogen
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/PDBCutter.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/PDBCutter.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/PDBCutter.dir/DependInfo.cmake --color=
Scanning dependencies of target PDBCutter
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/PDBCutter.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/PDBCutter.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 75%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/PDBCutter.dir/PDBCutter_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/PDBCutter_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/PDBCutter.dir/PDBCutter_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/PDBCutter_autogen/mocs_compilation.cpp
[ 75%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/PDBCutter.dir/PDBCutter.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/PDBCutter_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/PDBCutter.dir/PDBCutter.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/PDBCutter.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/secondaryStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBdefs.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/PDBCutter.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/PDBCutter.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/secondaryStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBdefs.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/PDBCutter.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/PDBCutter.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/secondaryStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBdefs.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/PDBCutter.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/PDBCutter.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 75%] Linking CXX executable ../../../bin/TOOLS/PDBCutter
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_link_script CMakeFiles/PDBCutter.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/PDBCutter.dir/PDBCutter_autogen/mocs_compilation.cpp.o CMakeFiles/PDBCutter.dir/PDBCutter.C.o -o ../../../bin/TOOLS/PDBCutter  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../../../lib/libBALL.so.1.5 /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 75%] Built target PDBCutter
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/InteractionConstraintDefiner_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/InteractionConstraintDefiner_autogen.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/InteractionConstraintDefiner_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target InteractionConstraintDefiner_autogen
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/InteractionConstraintDefiner_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/InteractionConstraintDefiner_autogen.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 75%] Automatic MOC for target InteractionConstraintDefiner
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/InteractionConstraintDefiner_autogen.dir/AutogenInfo.json Release
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 75%] Built target InteractionConstraintDefiner_autogen
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/InteractionConstraintDefiner.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/InteractionConstraintDefiner.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/InteractionConstraintDefiner.dir/DependInfo.cmake --color=
Scanning dependencies of target InteractionConstraintDefiner
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/InteractionConstraintDefiner.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/InteractionConstraintDefiner.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 75%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/InteractionConstraintDefiner.dir/InteractionConstraintDefiner_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/InteractionConstraintDefiner_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/InteractionConstraintDefiner.dir/InteractionConstraintDefiner_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/InteractionConstraintDefiner_autogen/mocs_compilation.cpp
[ 75%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/InteractionConstraintDefiner.dir/InteractionConstraintDefiner.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/InteractionConstraintDefiner_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/InteractionConstraintDefiner.dir/InteractionConstraintDefiner.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/InteractionConstraintDefiner.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/constraints.h:22,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/InteractionConstraintDefiner.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/commandlineParser.h:4,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/InteractionConstraintDefiner.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/constraints.h:22,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/InteractionConstraintDefiner.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/commandlineParser.h:4,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/InteractionConstraintDefiner.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/constraints.h:22,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/InteractionConstraintDefiner.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/commandlineParser.h:4,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/InteractionConstraintDefiner.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 75%] Linking CXX executable ../../../bin/TOOLS/InteractionConstraintDefiner
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_link_script CMakeFiles/InteractionConstraintDefiner.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/InteractionConstraintDefiner.dir/InteractionConstraintDefiner_autogen/mocs_compilation.cpp.o CMakeFiles/InteractionConstraintDefiner.dir/InteractionConstraintDefiner.C.o -o ../../../bin/TOOLS/InteractionConstraintDefiner  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../../../lib/libBALL.so.1.5 /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 75%] Built target InteractionConstraintDefiner
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/EvenSplit_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/EvenSplit_autogen.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/EvenSplit_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target EvenSplit_autogen
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/EvenSplit_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/EvenSplit_autogen.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 75%] Automatic MOC for target EvenSplit
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/EvenSplit_autogen.dir/AutogenInfo.json Release
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 75%] Built target EvenSplit_autogen
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/EvenSplit.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/EvenSplit.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/EvenSplit.dir/DependInfo.cmake --color=
Scanning dependencies of target EvenSplit
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/EvenSplit.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/EvenSplit.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 75%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/EvenSplit.dir/EvenSplit_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/EvenSplit_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/EvenSplit.dir/EvenSplit_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/EvenSplit_autogen/mocs_compilation.cpp
[ 75%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/EvenSplit.dir/EvenSplit.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/EvenSplit_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/EvenSplit.dir/EvenSplit.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/EvenSplit.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/molecule.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/EvenSplit.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/commandlineParser.h:4,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/EvenSplit.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/molecule.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/EvenSplit.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/commandlineParser.h:4,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/EvenSplit.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/molecule.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/EvenSplit.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/commandlineParser.h:4,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/EvenSplit.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 75%] Linking CXX executable ../../../bin/TOOLS/EvenSplit
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_link_script CMakeFiles/EvenSplit.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/EvenSplit.dir/EvenSplit_autogen/mocs_compilation.cpp.o CMakeFiles/EvenSplit.dir/EvenSplit.C.o -o ../../../bin/TOOLS/EvenSplit  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../../../lib/libBALL.so.1.5 /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 75%] Built target EvenSplit
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/CalculateSolvationFreeEnergy_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/CalculateSolvationFreeEnergy_autogen.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/CalculateSolvationFreeEnergy_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target CalculateSolvationFreeEnergy_autogen
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/CalculateSolvationFreeEnergy_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/CalculateSolvationFreeEnergy_autogen.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 75%] Automatic MOC for target CalculateSolvationFreeEnergy
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/CalculateSolvationFreeEnergy_autogen.dir/AutogenInfo.json Release
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 75%] Built target CalculateSolvationFreeEnergy_autogen
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/CalculateSolvationFreeEnergy.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/CalculateSolvationFreeEnergy.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/CalculateSolvationFreeEnergy.dir/DependInfo.cmake --color=
Scanning dependencies of target CalculateSolvationFreeEnergy
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/CalculateSolvationFreeEnergy.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/CalculateSolvationFreeEnergy.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 75%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/CalculateSolvationFreeEnergy.dir/CalculateSolvationFreeEnergy_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CalculateSolvationFreeEnergy_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/CalculateSolvationFreeEnergy.dir/CalculateSolvationFreeEnergy_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CalculateSolvationFreeEnergy_autogen/mocs_compilation.cpp
[ 75%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/CalculateSolvationFreeEnergy.dir/CalculateSolvationFreeEnergy.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CalculateSolvationFreeEnergy_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/CalculateSolvationFreeEnergy.dir/CalculateSolvationFreeEnergy.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/CalculateSolvationFreeEnergy.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceField.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/AMBER/amber.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/CalculateSolvationFreeEnergy.C:4:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceField.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/AMBER/amber.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/CalculateSolvationFreeEnergy.C:4:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceField.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/AMBER/amber.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/CalculateSolvationFreeEnergy.C:4:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceField.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/AMBER/amber.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/CalculateSolvationFreeEnergy.C:4:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceField.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/AMBER/amber.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/CalculateSolvationFreeEnergy.C:4:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceField.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/AMBER/amber.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/CalculateSolvationFreeEnergy.C:4:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/CalculateSolvationFreeEnergy.C: In function 'int main(int, char**)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/CalculateSolvationFreeEnergy.C:64:8: warning: unused variable 'total_energy' [-Wunused-variable]
   64 |  float total_energy = FF.updateEnergy();
      |        ^~~~~~~~~~~~
[ 75%] Linking CXX executable ../../../bin/TOOLS/CalculateSolvationFreeEnergy
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_link_script CMakeFiles/CalculateSolvationFreeEnergy.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/CalculateSolvationFreeEnergy.dir/CalculateSolvationFreeEnergy_autogen/mocs_compilation.cpp.o CMakeFiles/CalculateSolvationFreeEnergy.dir/CalculateSolvationFreeEnergy.C.o -o ../../../bin/TOOLS/CalculateSolvationFreeEnergy  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../../../lib/libBALL.so.1.5 /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 75%] Built target CalculateSolvationFreeEnergy
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/AddMissingAtoms_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/AddMissingAtoms_autogen.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/AddMissingAtoms_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target AddMissingAtoms_autogen
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make  -f source/APPLICATIONS/TOOLS/CMakeFiles/AddMissingAtoms_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/AddMissingAtoms_autogen.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 75%] Automatic MOC for target AddMissingAtoms
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/AddMissingAtoms_autogen.dir/AutogenInfo.json Release
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 75%] Built target AddMissingAtoms_autogen
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/AddMissingAtoms.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/AddMissingAtoms.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/AddMissingAtoms.dir/DependInfo.cmake --color=
Scanning dependencies of target AddMissingAtoms
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make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 75%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/AddMissingAtoms.dir/AddMissingAtoms_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/AddMissingAtoms_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/AddMissingAtoms.dir/AddMissingAtoms_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/AddMissingAtoms_autogen/mocs_compilation.cpp
[ 75%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/AddMissingAtoms.dir/AddMissingAtoms.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/AddMissingAtoms_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/AddMissingAtoms.dir/AddMissingAtoms.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/AddMissingAtoms.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/secondaryStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBdefs.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/AddMissingAtoms.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/commandlineParser.h:4,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/AddMissingAtoms.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/secondaryStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBdefs.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/AddMissingAtoms.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/commandlineParser.h:4,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/AddMissingAtoms.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/secondaryStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBdefs.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/AddMissingAtoms.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/commandlineParser.h:4,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/AddMissingAtoms.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 75%] Linking CXX executable ../../../bin/TOOLS/AddMissingAtoms
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_link_script CMakeFiles/AddMissingAtoms.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/AddMissingAtoms.dir/AddMissingAtoms_autogen/mocs_compilation.cpp.o CMakeFiles/AddMissingAtoms.dir/AddMissingAtoms.C.o -o ../../../bin/TOOLS/AddMissingAtoms  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../../../lib/libBALL.so.1.5 /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 75%] Built target AddMissingAtoms
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/RemoveWater_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/RemoveWater_autogen.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/RemoveWater_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target RemoveWater_autogen
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/RemoveWater_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/RemoveWater_autogen.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 75%] Automatic MOC for target RemoveWater
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/RemoveWater_autogen.dir/AutogenInfo.json Release
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 75%] Built target RemoveWater_autogen
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/RemoveWater.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/RemoveWater.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/RemoveWater.dir/DependInfo.cmake --color=
Scanning dependencies of target RemoveWater
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make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 75%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/RemoveWater.dir/RemoveWater_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/RemoveWater_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/RemoveWater.dir/RemoveWater_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/RemoveWater_autogen/mocs_compilation.cpp
[ 75%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/RemoveWater.dir/RemoveWater.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/RemoveWater_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/RemoveWater.dir/RemoveWater.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/RemoveWater.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/secondaryStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBdefs.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/RemoveWater.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/RemoveWater.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/secondaryStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBdefs.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/RemoveWater.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/RemoveWater.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/secondaryStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBdefs.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/RemoveWater.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/RemoveWater.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 75%] Linking CXX executable ../../../bin/TOOLS/RemoveWater
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_link_script CMakeFiles/RemoveWater.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/RemoveWater.dir/RemoveWater_autogen/mocs_compilation.cpp.o CMakeFiles/RemoveWater.dir/RemoveWater.C.o -o ../../../bin/TOOLS/RemoveWater  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../../../lib/libBALL.so.1.5 /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 75%] Built target RemoveWater
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/CalculateEnergy_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/CalculateEnergy_autogen.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/CalculateEnergy_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target CalculateEnergy_autogen
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/CalculateEnergy_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/CalculateEnergy_autogen.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 75%] Automatic MOC for target CalculateEnergy
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/CalculateEnergy_autogen.dir/AutogenInfo.json Release
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 75%] Built target CalculateEnergy_autogen
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/CalculateEnergy.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/CalculateEnergy.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/CalculateEnergy.dir/DependInfo.cmake --color=
Scanning dependencies of target CalculateEnergy
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make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 75%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/CalculateEnergy.dir/CalculateEnergy_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CalculateEnergy_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/CalculateEnergy.dir/CalculateEnergy_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CalculateEnergy_autogen/mocs_compilation.cpp
[ 75%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/CalculateEnergy.dir/CalculateEnergy.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CalculateEnergy_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/CalculateEnergy.dir/CalculateEnergy.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/CalculateEnergy.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceField.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/AMBER/amber.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/CalculateEnergy.C:4:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceField.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/AMBER/amber.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/CalculateEnergy.C:4:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceField.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/AMBER/amber.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/CalculateEnergy.C:4:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceField.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/AMBER/amber.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/CalculateEnergy.C:4:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceField.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/AMBER/amber.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/CalculateEnergy.C:4:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceField.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/AMBER/amber.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/CalculateEnergy.C:4:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/AMBER/amber.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/CalculateEnergy.C:4:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94ParametersBase::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:43:3: note: in expansion of macro 'BALL_CREATE'
   43 |   BALL_CREATE(MMFF94ParametersBase)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/CalculateEnergy.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/AMBER/amber.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/CalculateEnergy.C:4:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:3: note: in expansion of macro 'BALL_CREATE'
  217 |   BALL_CREATE(MMFF94StretchParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/CalculateEnergy.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:226:34: note: because 'BALL::MMFF94StretchParameters' has user-provided 'const BALL::MMFF94StretchParameters& BALL::MMFF94StretchParameters::operator=(const BALL::MMFF94StretchParameters&)'
  226 |   const MMFF94StretchParameters& operator = (const MMFF94StretchParameters& param)
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:185:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  185 |  class BALL_EXPORT MMFF94StretchParameters:
      |                    ^~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/AMBER/amber.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/CalculateEnergy.C:4:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:3: note: in expansion of macro 'BALL_CREATE'
  217 |   BALL_CREATE(MMFF94StretchParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94BendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:3: note: in expansion of macro 'BALL_CREATE'
  271 |   BALL_CREATE(MMFF94BendParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/CalculateEnergy.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:280:31: note: because 'BALL::MMFF94BendParameters' has user-provided 'const BALL::MMFF94BendParameters& BALL::MMFF94BendParameters::operator=(const BALL::MMFF94BendParameters&)'
  280 |   const MMFF94BendParameters& operator = (const MMFF94BendParameters& param)
      |                               ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:263:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  263 |  class BALL_EXPORT MMFF94BendParameters
      |                    ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/AMBER/amber.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/CalculateEnergy.C:4:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94BendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:3: note: in expansion of macro 'BALL_CREATE'
  271 |   BALL_CREATE(MMFF94BendParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:3: note: in expansion of macro 'BALL_CREATE'
  318 |   BALL_CREATE(MMFF94StretchBendParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/CalculateEnergy.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:327:38: note: because 'BALL::MMFF94StretchBendParameters' has user-provided 'const BALL::MMFF94StretchBendParameters& BALL::MMFF94StretchBendParameters::operator=(const BALL::MMFF94StretchBendParameters&)'
  327 |   const MMFF94StretchBendParameters& operator = (const MMFF94StretchBendParameters& param)
      |                                      ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:310:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  310 |  class BALL_EXPORT MMFF94StretchBendParameters
      |                    ^~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/AMBER/amber.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/CalculateEnergy.C:4:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:3: note: in expansion of macro 'BALL_CREATE'
  318 |   BALL_CREATE(MMFF94StretchBendParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:3: note: in expansion of macro 'BALL_CREATE'
  374 |   BALL_CREATE(MMFF94TorsionParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/CalculateEnergy.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:383:34: note: because 'BALL::MMFF94TorsionParameters' has user-provided 'const BALL::MMFF94TorsionParameters& BALL::MMFF94TorsionParameters::operator=(const BALL::MMFF94TorsionParameters&)'
  383 |   const MMFF94TorsionParameters& operator = (const MMFF94TorsionParameters& param)
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:366:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  366 |  class BALL_EXPORT MMFF94TorsionParameters
      |                    ^~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/AMBER/amber.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/CalculateEnergy.C:4:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:3: note: in expansion of macro 'BALL_CREATE'
  374 |   BALL_CREATE(MMFF94TorsionParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:3: note: in expansion of macro 'BALL_CREATE'
  422 |   BALL_CREATE(MMFF94PlaneParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/CalculateEnergy.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:431:32: note: because 'BALL::MMFF94PlaneParameters' has user-provided 'const BALL::MMFF94PlaneParameters& BALL::MMFF94PlaneParameters::operator=(const BALL::MMFF94PlaneParameters&)'
  431 |   const MMFF94PlaneParameters& operator = (const MMFF94PlaneParameters& param)
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:414:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  414 |  class BALL_EXPORT MMFF94PlaneParameters
      |                    ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/AMBER/amber.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/CalculateEnergy.C:4:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:3: note: in expansion of macro 'BALL_CREATE'
  422 |   BALL_CREATE(MMFF94PlaneParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:3: note: in expansion of macro 'BALL_CREATE'
  473 |   BALL_CREATE(MMFF94VDWParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/CalculateEnergy.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:482:30: note: because 'BALL::MMFF94VDWParameters' has user-provided 'const BALL::MMFF94VDWParameters& BALL::MMFF94VDWParameters::operator=(const BALL::MMFF94VDWParameters&)'
  482 |   const MMFF94VDWParameters& operator = (const MMFF94VDWParameters& param)
      |                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:458:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  458 |  class BALL_EXPORT MMFF94VDWParameters
      |                    ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/AMBER/amber.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/CalculateEnergy.C:4:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:3: note: in expansion of macro 'BALL_CREATE'
  473 |   BALL_CREATE(MMFF94VDWParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94ESParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:3: note: in expansion of macro 'BALL_CREATE'
  530 |   BALL_CREATE(MMFF94ESParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/CalculateEnergy.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:539:29: note: because 'BALL::MMFF94ESParameters' has user-provided 'const BALL::MMFF94ESParameters& BALL::MMFF94ESParameters::operator=(const BALL::MMFF94ESParameters&)'
  539 |   const MMFF94ESParameters& operator = (const MMFF94ESParameters& param)
      |                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:525:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  525 |  class BALL_EXPORT MMFF94ESParameters
      |                    ^~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/AMBER/amber.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/CalculateEnergy.C:4:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94ESParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:3: note: in expansion of macro 'BALL_CREATE'
  530 |   BALL_CREATE(MMFF94ESParameters)
      |   ^~~~~~~~~~~
[ 75%] Linking CXX executable ../../../bin/TOOLS/CalculateEnergy
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_link_script CMakeFiles/CalculateEnergy.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/CalculateEnergy.dir/CalculateEnergy_autogen/mocs_compilation.cpp.o CMakeFiles/CalculateEnergy.dir/CalculateEnergy.C.o -o ../../../bin/TOOLS/CalculateEnergy  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../../../lib/libBALL.so.1.5 /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 75%] Built target CalculateEnergy
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/Converter_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/Converter_autogen.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/Converter_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target Converter_autogen
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/Converter_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/Converter_autogen.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 75%] Automatic MOC for target Converter
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/Converter_autogen.dir/AutogenInfo.json Release
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 75%] Built target Converter_autogen
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/Converter.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/Converter.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/Converter.dir/DependInfo.cmake --color=
Scanning dependencies of target Converter
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/Converter.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/Converter.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 75%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/Converter.dir/Converter_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/Converter_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/Converter.dir/Converter_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/Converter_autogen/mocs_compilation.cpp
[ 75%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/Converter.dir/Converter.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/Converter_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/Converter.dir/Converter.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/Converter.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/secondaryStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBdefs.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/dockResultFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/Converter.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/dockResultFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/Converter.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/secondaryStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBdefs.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/dockResultFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/Converter.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/dockResultFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/Converter.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/secondaryStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBdefs.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/dockResultFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/Converter.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/dockResultFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/Converter.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 75%] Linking CXX executable ../../../bin/TOOLS/Converter
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_link_script CMakeFiles/Converter.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Converter.dir/Converter_autogen/mocs_compilation.cpp.o CMakeFiles/Converter.dir/Converter.C.o -o ../../../bin/TOOLS/Converter  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../../../lib/libBALL.so.1.5 /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 75%] Built target Converter
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/ScoreAnalyzer_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/ScoreAnalyzer_autogen.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/ScoreAnalyzer_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target ScoreAnalyzer_autogen
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/ScoreAnalyzer_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/ScoreAnalyzer_autogen.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 75%] Automatic MOC for target ScoreAnalyzer
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/ScoreAnalyzer_autogen.dir/AutogenInfo.json Release
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 75%] Built target ScoreAnalyzer_autogen
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/ScoreAnalyzer.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/ScoreAnalyzer.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/ScoreAnalyzer.dir/DependInfo.cmake --color=
Scanning dependencies of target ScoreAnalyzer
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/ScoreAnalyzer.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/ScoreAnalyzer.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 75%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/ScoreAnalyzer.dir/ScoreAnalyzer_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/ScoreAnalyzer_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/ScoreAnalyzer.dir/ScoreAnalyzer_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/ScoreAnalyzer_autogen/mocs_compilation.cpp
[ 75%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/ScoreAnalyzer.dir/ScoreAnalyzer.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/ScoreAnalyzer_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/ScoreAnalyzer.dir/ScoreAnalyzer.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/ScoreAnalyzer.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/molecule.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/ScoreAnalyzer.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/commandlineParser.h:4,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/ScoreAnalyzer.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/molecule.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/ScoreAnalyzer.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/commandlineParser.h:4,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/ScoreAnalyzer.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/molecule.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/ScoreAnalyzer.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/commandlineParser.h:4,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/ScoreAnalyzer.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 75%] Linking CXX executable ../../../bin/TOOLS/ScoreAnalyzer
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_link_script CMakeFiles/ScoreAnalyzer.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/ScoreAnalyzer.dir/ScoreAnalyzer_autogen/mocs_compilation.cpp.o CMakeFiles/ScoreAnalyzer.dir/ScoreAnalyzer.C.o -o ../../../bin/TOOLS/ScoreAnalyzer  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../../../lib/libBALL.so.1.5 /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 75%] Built target ScoreAnalyzer
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/MolPredictor_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/MolPredictor_autogen.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/MolPredictor_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target MolPredictor_autogen
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/MolPredictor_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/MolPredictor_autogen.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 75%] Automatic MOC for target MolPredictor
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/MolPredictor_autogen.dir/AutogenInfo.json Release
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 75%] Built target MolPredictor_autogen
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/MolPredictor.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/MolPredictor.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/MolPredictor.dir/DependInfo.cmake --color=
Scanning dependencies of target MolPredictor
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/MolPredictor.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/MolPredictor.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 75%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/MolPredictor.dir/MolPredictor_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/MolPredictor_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/MolPredictor.dir/MolPredictor_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/MolPredictor_autogen/mocs_compilation.cpp
[ 77%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/MolPredictor.dir/MolPredictor.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/MolPredictor_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/MolPredictor.dir/MolPredictor.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/MolPredictor.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/modelFactory.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/registry.h:5,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/MolPredictor.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/commandlineParser.h:4,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/MolPredictor.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/modelFactory.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/registry.h:5,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/MolPredictor.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/commandlineParser.h:4,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/MolPredictor.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/modelFactory.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/registry.h:5,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/MolPredictor.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/commandlineParser.h:4,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/MolPredictor.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 77%] Linking CXX executable ../../../bin/TOOLS/MolPredictor
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_link_script CMakeFiles/MolPredictor.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/MolPredictor.dir/MolPredictor_autogen/mocs_compilation.cpp.o CMakeFiles/MolPredictor.dir/MolPredictor.C.o -o ../../../bin/TOOLS/MolPredictor  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../../../lib/libBALL.so.1.5 /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 77%] Built target MolPredictor
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/ResidueChecker_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/ResidueChecker_autogen.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/ResidueChecker_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target ResidueChecker_autogen
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/ResidueChecker_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/ResidueChecker_autogen.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 77%] Automatic MOC for target ResidueChecker
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/ResidueChecker_autogen.dir/AutogenInfo.json Release
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 77%] Built target ResidueChecker_autogen
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/ResidueChecker.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/ResidueChecker.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/ResidueChecker.dir/DependInfo.cmake --color=
Scanning dependencies of target ResidueChecker
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
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make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 77%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/ResidueChecker.dir/ResidueChecker_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/ResidueChecker_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/ResidueChecker.dir/ResidueChecker_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/ResidueChecker_autogen/mocs_compilation.cpp
[ 77%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/ResidueChecker.dir/ResidueChecker.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/ResidueChecker_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/ResidueChecker.dir/ResidueChecker.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/ResidueChecker.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/secondaryStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBdefs.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/ResidueChecker.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/ResidueChecker.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/secondaryStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBdefs.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/ResidueChecker.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/ResidueChecker.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/secondaryStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBdefs.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/ResidueChecker.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/ResidueChecker.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 77%] Linking CXX executable ../../../bin/TOOLS/ResidueChecker
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_link_script CMakeFiles/ResidueChecker.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/ResidueChecker.dir/ResidueChecker_autogen/mocs_compilation.cpp.o CMakeFiles/ResidueChecker.dir/ResidueChecker.C.o -o ../../../bin/TOOLS/ResidueChecker  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../../../lib/libBALL.so.1.5 /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 77%] Built target ResidueChecker
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/FingerprintSimilaritySearch_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/FingerprintSimilaritySearch_autogen.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/FingerprintSimilaritySearch_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target FingerprintSimilaritySearch_autogen
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/FingerprintSimilaritySearch_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/FingerprintSimilaritySearch_autogen.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 77%] Automatic MOC for target FingerprintSimilaritySearch
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/FingerprintSimilaritySearch_autogen.dir/AutogenInfo.json Release
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 77%] Built target FingerprintSimilaritySearch_autogen
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/FingerprintSimilaritySearch.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/FingerprintSimilaritySearch.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/FingerprintSimilaritySearch.dir/DependInfo.cmake --color=
Scanning dependencies of target FingerprintSimilaritySearch
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/FingerprintSimilaritySearch.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/FingerprintSimilaritySearch.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 77%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/FingerprintSimilaritySearch.dir/FingerprintSimilaritySearch_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/FingerprintSimilaritySearch_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/FingerprintSimilaritySearch.dir/FingerprintSimilaritySearch_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/FingerprintSimilaritySearch_autogen/mocs_compilation.cpp
[ 77%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/FingerprintSimilaritySearch.dir/FingerprintSimilaritySearch.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/FingerprintSimilaritySearch_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/FingerprintSimilaritySearch.dir/FingerprintSimilaritySearch.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/FingerprintSimilaritySearch.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/molecule.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/FingerprintSimilaritySearch.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/commandlineParser.h:4,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/FingerprintSimilaritySearch.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/molecule.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/FingerprintSimilaritySearch.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/commandlineParser.h:4,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/FingerprintSimilaritySearch.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/molecule.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/FingerprintSimilaritySearch.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/commandlineParser.h:4,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/FingerprintSimilaritySearch.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 77%] Linking CXX executable ../../../bin/TOOLS/FingerprintSimilaritySearch
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_link_script CMakeFiles/FingerprintSimilaritySearch.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/FingerprintSimilaritySearch.dir/FingerprintSimilaritySearch_autogen/mocs_compilation.cpp.o CMakeFiles/FingerprintSimilaritySearch.dir/FingerprintSimilaritySearch.C.o -o ../../../bin/TOOLS/FingerprintSimilaritySearch  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../../../lib/libBALL.so.1.5 /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 77%] Built target FingerprintSimilaritySearch
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/PDBDownload_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/PDBDownload_autogen.dir/depend
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cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/PDBDownload_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target PDBDownload_autogen
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[ 77%] Automatic MOC for target PDBDownload
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/PDBDownload_autogen.dir/AutogenInfo.json Release
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make  -f source/APPLICATIONS/TOOLS/CMakeFiles/PDBDownload.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/PDBDownload.dir/depend
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cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/PDBDownload.dir/DependInfo.cmake --color=
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[ 77%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/PDBDownload.dir/PDBDownload_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/PDBDownload_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/PDBDownload.dir/PDBDownload_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/PDBDownload_autogen/mocs_compilation.cpp
[ 77%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/PDBDownload.dir/PDBDownload.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/PDBDownload_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/PDBDownload.dir/PDBDownload.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/PDBDownload.C
[ 77%] Linking CXX executable ../../../bin/TOOLS/PDBDownload
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_link_script CMakeFiles/PDBDownload.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/PDBDownload.dir/PDBDownload_autogen/mocs_compilation.cpp.o CMakeFiles/PDBDownload.dir/PDBDownload.C.o -o ../../../bin/TOOLS/PDBDownload  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../../../lib/libBALL.so.1.5 /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 77%] Built target PDBDownload
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/PoseIndices2PDB_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/PoseIndices2PDB_autogen.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/PoseIndices2PDB_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target PoseIndices2PDB_autogen
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/PoseIndices2PDB_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/PoseIndices2PDB_autogen.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 77%] Automatic MOC for target PoseIndices2PDB
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/PoseIndices2PDB_autogen.dir/AutogenInfo.json Release
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 77%] Built target PoseIndices2PDB_autogen
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/PoseIndices2PDB.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/PoseIndices2PDB.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/PoseIndices2PDB.dir/DependInfo.cmake --color=
Scanning dependencies of target PoseIndices2PDB
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/PoseIndices2PDB.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/PoseIndices2PDB.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 77%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/PoseIndices2PDB.dir/PoseIndices2PDB_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/PoseIndices2PDB_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/PoseIndices2PDB.dir/PoseIndices2PDB_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/PoseIndices2PDB_autogen/mocs_compilation.cpp
[ 77%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/PoseIndices2PDB.dir/PoseIndices2PDB.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/PoseIndices2PDB_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/PoseIndices2PDB.dir/PoseIndices2PDB.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/PoseIndices2PDB.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/PoseIndices2PDB.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/PoseIndices2PDB.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/PoseIndices2PDB.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/PoseIndices2PDB.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/PoseIndices2PDB.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/PoseIndices2PDB.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 77%] Linking CXX executable ../../../bin/TOOLS/PoseIndices2PDB
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_link_script CMakeFiles/PoseIndices2PDB.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/PoseIndices2PDB.dir/PoseIndices2PDB_autogen/mocs_compilation.cpp.o CMakeFiles/PoseIndices2PDB.dir/PoseIndices2PDB.C.o -o ../../../bin/TOOLS/PoseIndices2PDB  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../../../lib/libBALL.so.1.5 /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 77%] Built target PoseIndices2PDB
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/MolCombine_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/MolCombine_autogen.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/MolCombine_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target MolCombine_autogen
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/MolCombine_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/MolCombine_autogen.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 77%] Automatic MOC for target MolCombine
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/MolCombine_autogen.dir/AutogenInfo.json Release
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 77%] Built target MolCombine_autogen
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/MolCombine.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/MolCombine.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/MolCombine.dir/DependInfo.cmake --color=
Scanning dependencies of target MolCombine
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/MolCombine.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/MolCombine.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 77%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/MolCombine.dir/MolCombine_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/MolCombine_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/MolCombine.dir/MolCombine_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/MolCombine_autogen/mocs_compilation.cpp
[ 77%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/MolCombine.dir/MolCombine.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/MolCombine_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/MolCombine.dir/MolCombine.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/MolCombine.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/molecule.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/MolCombine.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/commandlineParser.h:4,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/MolCombine.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/molecule.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/MolCombine.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/commandlineParser.h:4,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/MolCombine.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/molecule.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/MolCombine.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/commandlineParser.h:4,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/MolCombine.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 77%] Linking CXX executable ../../../bin/TOOLS/MolCombine
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_link_script CMakeFiles/MolCombine.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/MolCombine.dir/MolCombine_autogen/mocs_compilation.cpp.o CMakeFiles/MolCombine.dir/MolCombine.C.o -o ../../../bin/TOOLS/MolCombine  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../../../lib/libBALL.so.1.5 /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 77%] Built target MolCombine
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/DockPoseClustering_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/DockPoseClustering_autogen.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/DockPoseClustering_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target DockPoseClustering_autogen
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/DockPoseClustering_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/DockPoseClustering_autogen.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 77%] Automatic MOC for target DockPoseClustering
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/DockPoseClustering_autogen.dir/AutogenInfo.json Release
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 77%] Built target DockPoseClustering_autogen
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/DockPoseClustering.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/DockPoseClustering.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/DockPoseClustering.dir/DependInfo.cmake --color=
Scanning dependencies of target DockPoseClustering
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/DockPoseClustering.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/DockPoseClustering.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 77%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/DockPoseClustering.dir/DockPoseClustering_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/DockPoseClustering_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/DockPoseClustering.dir/DockPoseClustering_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/DockPoseClustering_autogen/mocs_compilation.cpp
[ 77%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/DockPoseClustering.dir/DockPoseClustering.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/DockPoseClustering_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/DockPoseClustering.dir/DockPoseClustering.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/DockPoseClustering.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/conformationSet.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/poseClustering.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/DockPoseClustering.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/poseClustering.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/DockPoseClustering.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/conformationSet.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/poseClustering.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/DockPoseClustering.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/poseClustering.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/DockPoseClustering.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/conformationSet.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/poseClustering.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/DockPoseClustering.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/poseClustering.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/DockPoseClustering.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 77%] Linking CXX executable ../../../bin/TOOLS/DockPoseClustering
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_link_script CMakeFiles/DockPoseClustering.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/DockPoseClustering.dir/DockPoseClustering_autogen/mocs_compilation.cpp.o CMakeFiles/DockPoseClustering.dir/DockPoseClustering.C.o -o ../../../bin/TOOLS/DockPoseClustering  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../../../lib/libBALL.so.1.5 /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 77%] Built target DockPoseClustering
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/PropertyModifier_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/PropertyModifier_autogen.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/PropertyModifier_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target PropertyModifier_autogen
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/PropertyModifier_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/PropertyModifier_autogen.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 77%] Automatic MOC for target PropertyModifier
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/PropertyModifier_autogen.dir/AutogenInfo.json Release
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 77%] Built target PropertyModifier_autogen
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/PropertyModifier.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/PropertyModifier.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/PropertyModifier.dir/DependInfo.cmake --color=
Scanning dependencies of target PropertyModifier
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/PropertyModifier.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/PropertyModifier.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 77%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/PropertyModifier.dir/PropertyModifier_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/PropertyModifier_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/PropertyModifier.dir/PropertyModifier_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/PropertyModifier_autogen/mocs_compilation.cpp
[ 77%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/PropertyModifier.dir/PropertyModifier.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/PropertyModifier_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/PropertyModifier.dir/PropertyModifier.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/PropertyModifier.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/molecule.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/PropertyModifier.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/commandlineParser.h:4,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/PropertyModifier.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/molecule.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/PropertyModifier.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/commandlineParser.h:4,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/PropertyModifier.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/molecule.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/PropertyModifier.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/commandlineParser.h:4,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/PropertyModifier.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 77%] Linking CXX executable ../../../bin/TOOLS/PropertyModifier
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_link_script CMakeFiles/PropertyModifier.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/PropertyModifier.dir/PropertyModifier_autogen/mocs_compilation.cpp.o CMakeFiles/PropertyModifier.dir/PropertyModifier.C.o -o ../../../bin/TOOLS/PropertyModifier  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../../../lib/libBALL.so.1.5 /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 77%] Built target PropertyModifier
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/PropertyPlotter_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/PropertyPlotter_autogen.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/PropertyPlotter_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target PropertyPlotter_autogen
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/PropertyPlotter_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/PropertyPlotter_autogen.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 77%] Automatic MOC for target PropertyPlotter
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/PropertyPlotter_autogen.dir/AutogenInfo.json Release
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 77%] Built target PropertyPlotter_autogen
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/PropertyPlotter.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/PropertyPlotter.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/PropertyPlotter.dir/DependInfo.cmake --color=
Scanning dependencies of target PropertyPlotter
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/PropertyPlotter.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/PropertyPlotter.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 77%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/PropertyPlotter.dir/PropertyPlotter_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/PropertyPlotter_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/PropertyPlotter.dir/PropertyPlotter_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/PropertyPlotter_autogen/mocs_compilation.cpp
[ 77%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/PropertyPlotter.dir/PropertyPlotter.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/PropertyPlotter_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/PropertyPlotter.dir/PropertyPlotter.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/PropertyPlotter.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/molecule.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/PropertyPlotter.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/commandlineParser.h:4,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/PropertyPlotter.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/molecule.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/PropertyPlotter.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/commandlineParser.h:4,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/PropertyPlotter.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/molecule.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/PropertyPlotter.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/commandlineParser.h:4,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/PropertyPlotter.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 77%] Linking CXX executable ../../../bin/TOOLS/PropertyPlotter
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_link_script CMakeFiles/PropertyPlotter.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/PropertyPlotter.dir/PropertyPlotter_autogen/mocs_compilation.cpp.o CMakeFiles/PropertyPlotter.dir/PropertyPlotter.C.o -o ../../../bin/TOOLS/PropertyPlotter  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../../../lib/libBALL.so.1.5 /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 77%] Built target PropertyPlotter
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/PDBRMSDCalculator_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/PDBRMSDCalculator_autogen.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/PDBRMSDCalculator_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target PDBRMSDCalculator_autogen
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/PDBRMSDCalculator_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/PDBRMSDCalculator_autogen.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 79%] Automatic MOC for target PDBRMSDCalculator
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/PDBRMSDCalculator_autogen.dir/AutogenInfo.json Release
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 79%] Built target PDBRMSDCalculator_autogen
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/PDBRMSDCalculator.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/PDBRMSDCalculator.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/PDBRMSDCalculator.dir/DependInfo.cmake --color=
Scanning dependencies of target PDBRMSDCalculator
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/PDBRMSDCalculator.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/PDBRMSDCalculator.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 79%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/PDBRMSDCalculator.dir/PDBRMSDCalculator_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/PDBRMSDCalculator_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/PDBRMSDCalculator.dir/PDBRMSDCalculator_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/PDBRMSDCalculator_autogen/mocs_compilation.cpp
[ 79%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/PDBRMSDCalculator.dir/PDBRMSDCalculator.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/PDBRMSDCalculator_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/PDBRMSDCalculator.dir/PDBRMSDCalculator.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/PDBRMSDCalculator.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/conformationSet.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/poseClustering.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/PDBRMSDCalculator.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/poseClustering.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/PDBRMSDCalculator.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/conformationSet.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/poseClustering.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/PDBRMSDCalculator.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/poseClustering.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/PDBRMSDCalculator.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/conformationSet.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/poseClustering.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/PDBRMSDCalculator.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/poseClustering.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/PDBRMSDCalculator.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 79%] Linking CXX executable ../../../bin/TOOLS/PDBRMSDCalculator
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_link_script CMakeFiles/PDBRMSDCalculator.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/PDBRMSDCalculator.dir/PDBRMSDCalculator_autogen/mocs_compilation.cpp.o CMakeFiles/PDBRMSDCalculator.dir/PDBRMSDCalculator.C.o -o ../../../bin/TOOLS/PDBRMSDCalculator  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../../../lib/libBALL.so.1.5 /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 79%] Built target PDBRMSDCalculator
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/WaterFinder_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/WaterFinder_autogen.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/WaterFinder_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target WaterFinder_autogen
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/WaterFinder_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/WaterFinder_autogen.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 79%] Automatic MOC for target WaterFinder
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/WaterFinder_autogen.dir/AutogenInfo.json Release
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 79%] Built target WaterFinder_autogen
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/WaterFinder.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/WaterFinder.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/WaterFinder.dir/DependInfo.cmake --color=
Scanning dependencies of target WaterFinder
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
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make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 79%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/WaterFinder.dir/WaterFinder_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/WaterFinder_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/WaterFinder.dir/WaterFinder_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/WaterFinder_autogen/mocs_compilation.cpp
[ 79%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/WaterFinder.dir/WaterFinder.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/WaterFinder_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/WaterFinder.dir/WaterFinder.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/WaterFinder.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/secondaryStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBdefs.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/WaterFinder.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/WaterFinder.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/secondaryStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBdefs.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/WaterFinder.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/WaterFinder.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/secondaryStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBdefs.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/WaterFinder.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/WaterFinder.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/WaterFinder.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94ParametersBase::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:43:3: note: in expansion of macro 'BALL_CREATE'
   43 |   BALL_CREATE(MMFF94ParametersBase)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/PLPScoring.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/WaterFinder.C:15:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/WaterFinder.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:3: note: in expansion of macro 'BALL_CREATE'
  217 |   BALL_CREATE(MMFF94StretchParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/PLPScoring.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/WaterFinder.C:15:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:226:34: note: because 'BALL::MMFF94StretchParameters' has user-provided 'const BALL::MMFF94StretchParameters& BALL::MMFF94StretchParameters::operator=(const BALL::MMFF94StretchParameters&)'
  226 |   const MMFF94StretchParameters& operator = (const MMFF94StretchParameters& param)
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:185:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  185 |  class BALL_EXPORT MMFF94StretchParameters:
      |                    ^~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/WaterFinder.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:3: note: in expansion of macro 'BALL_CREATE'
  217 |   BALL_CREATE(MMFF94StretchParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94BendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:3: note: in expansion of macro 'BALL_CREATE'
  271 |   BALL_CREATE(MMFF94BendParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/PLPScoring.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/WaterFinder.C:15:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:280:31: note: because 'BALL::MMFF94BendParameters' has user-provided 'const BALL::MMFF94BendParameters& BALL::MMFF94BendParameters::operator=(const BALL::MMFF94BendParameters&)'
  280 |   const MMFF94BendParameters& operator = (const MMFF94BendParameters& param)
      |                               ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:263:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  263 |  class BALL_EXPORT MMFF94BendParameters
      |                    ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/WaterFinder.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94BendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:3: note: in expansion of macro 'BALL_CREATE'
  271 |   BALL_CREATE(MMFF94BendParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:3: note: in expansion of macro 'BALL_CREATE'
  318 |   BALL_CREATE(MMFF94StretchBendParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/PLPScoring.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/WaterFinder.C:15:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:327:38: note: because 'BALL::MMFF94StretchBendParameters' has user-provided 'const BALL::MMFF94StretchBendParameters& BALL::MMFF94StretchBendParameters::operator=(const BALL::MMFF94StretchBendParameters&)'
  327 |   const MMFF94StretchBendParameters& operator = (const MMFF94StretchBendParameters& param)
      |                                      ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:310:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  310 |  class BALL_EXPORT MMFF94StretchBendParameters
      |                    ^~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/WaterFinder.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:3: note: in expansion of macro 'BALL_CREATE'
  318 |   BALL_CREATE(MMFF94StretchBendParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:3: note: in expansion of macro 'BALL_CREATE'
  374 |   BALL_CREATE(MMFF94TorsionParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/PLPScoring.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/WaterFinder.C:15:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:383:34: note: because 'BALL::MMFF94TorsionParameters' has user-provided 'const BALL::MMFF94TorsionParameters& BALL::MMFF94TorsionParameters::operator=(const BALL::MMFF94TorsionParameters&)'
  383 |   const MMFF94TorsionParameters& operator = (const MMFF94TorsionParameters& param)
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:366:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  366 |  class BALL_EXPORT MMFF94TorsionParameters
      |                    ^~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/WaterFinder.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:3: note: in expansion of macro 'BALL_CREATE'
  374 |   BALL_CREATE(MMFF94TorsionParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:3: note: in expansion of macro 'BALL_CREATE'
  422 |   BALL_CREATE(MMFF94PlaneParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/PLPScoring.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/WaterFinder.C:15:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:431:32: note: because 'BALL::MMFF94PlaneParameters' has user-provided 'const BALL::MMFF94PlaneParameters& BALL::MMFF94PlaneParameters::operator=(const BALL::MMFF94PlaneParameters&)'
  431 |   const MMFF94PlaneParameters& operator = (const MMFF94PlaneParameters& param)
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:414:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  414 |  class BALL_EXPORT MMFF94PlaneParameters
      |                    ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/WaterFinder.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:3: note: in expansion of macro 'BALL_CREATE'
  422 |   BALL_CREATE(MMFF94PlaneParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:3: note: in expansion of macro 'BALL_CREATE'
  473 |   BALL_CREATE(MMFF94VDWParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/PLPScoring.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/WaterFinder.C:15:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:482:30: note: because 'BALL::MMFF94VDWParameters' has user-provided 'const BALL::MMFF94VDWParameters& BALL::MMFF94VDWParameters::operator=(const BALL::MMFF94VDWParameters&)'
  482 |   const MMFF94VDWParameters& operator = (const MMFF94VDWParameters& param)
      |                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:458:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  458 |  class BALL_EXPORT MMFF94VDWParameters
      |                    ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/WaterFinder.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:3: note: in expansion of macro 'BALL_CREATE'
  473 |   BALL_CREATE(MMFF94VDWParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94ESParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:3: note: in expansion of macro 'BALL_CREATE'
  530 |   BALL_CREATE(MMFF94ESParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/PLPScoring.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/WaterFinder.C:15:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:539:29: note: because 'BALL::MMFF94ESParameters' has user-provided 'const BALL::MMFF94ESParameters& BALL::MMFF94ESParameters::operator=(const BALL::MMFF94ESParameters&)'
  539 |   const MMFF94ESParameters& operator = (const MMFF94ESParameters& param)
      |                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:525:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  525 |  class BALL_EXPORT MMFF94ESParameters
      |                    ^~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/WaterFinder.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94ESParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:3: note: in expansion of macro 'BALL_CREATE'
  530 |   BALL_CREATE(MMFF94ESParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/WaterFinder.C: In function 'void removeUnboundWaterNetworks(BALL::Chain*, BALL::System&, BALL::Options&, const double&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/WaterFinder.C:300:14: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  300 |    res_it2 = next_res2;
      |              ^~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/WaterFinder.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Residue; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::ResidueIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Residue; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::ResidueIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/WaterFinder.C: In function 'void removeUnboundWaterNetworks(BALL::Chain*, BALL::System&, BALL::Options&, const double&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/WaterFinder.C:300:14: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>&)' first required here
  300 |    res_it2 = next_res2;
      |              ^~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/WaterFinder.C:349:13: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  349 |   res_it1 = next_res1;
      |             ^~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/WaterFinder.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Residue; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::ResidueIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/WaterFinder.C:387:13: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  387 |    res_it = tmp_it;
      |             ^~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/WaterFinder.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Residue; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::ResidueIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/WaterFinder.C: In function 'int main(int, char**)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/WaterFinder.C:562:9: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  562 |    it = tmp_it;
      |         ^~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/WaterFinder.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Residue; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::ResidueIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/WaterFinder.C:665:9: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  665 |    it = tmp_it;
      |         ^~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/WaterFinder.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Residue; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::ResidueIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/WaterFinder.C:691:8: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  691 |   it = tmp_it;
      |        ^~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/WaterFinder.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Residue; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::ResidueIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 79%] Linking CXX executable ../../../bin/TOOLS/WaterFinder
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_link_script CMakeFiles/WaterFinder.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/WaterFinder.dir/WaterFinder_autogen/mocs_compilation.cpp.o CMakeFiles/WaterFinder.dir/WaterFinder.C.o -o ../../../bin/TOOLS/WaterFinder  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../../../lib/libBALL.so.1.5 /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 79%] Built target WaterFinder
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/PocketDetector_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/PocketDetector_autogen.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/PocketDetector_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target PocketDetector_autogen
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/PocketDetector_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/PocketDetector_autogen.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 79%] Automatic MOC for target PocketDetector
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/PocketDetector_autogen.dir/AutogenInfo.json Release
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 79%] Built target PocketDetector_autogen
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/PocketDetector.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/PocketDetector.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/PocketDetector.dir/DependInfo.cmake --color=
Scanning dependencies of target PocketDetector
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/PocketDetector.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/PocketDetector.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 79%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/PocketDetector.dir/PocketDetector_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/PocketDetector_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/PocketDetector.dir/PocketDetector_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/PocketDetector_autogen/mocs_compilation.cpp
[ 79%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/PocketDetector.dir/PocketDetector.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/PocketDetector_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/PocketDetector.dir/PocketDetector.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/PocketDetector.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/bindingPocketProcessor.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/PocketDetector.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/bindingPocketProcessor.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/PocketDetector.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/bindingPocketProcessor.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/PocketDetector.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/bindingPocketProcessor.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/PocketDetector.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/bindingPocketProcessor.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/PocketDetector.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/bindingPocketProcessor.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/PocketDetector.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/bindingPocketProcessor.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/PocketDetector.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h: In instantiation of 'BALL::Index BALL::HashGrid3<Item>::getIndex_(const BALL::HashGridBox3<Item>&) const [with Item = BALL::TVector3<float>; BALL::Index = int]':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:1516:17:   required from 'bool BALL::HashGrid3<Item>::getIndices(const BALL::HashGridBox3<Item>&, BALL::Position&, BALL::Position&, BALL::Position&) const [with Item = BALL::TVector3<float>; BALL::Position = unsigned int]'
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/PocketDetector.C:55:40:   required from here
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:1726:46: warning: comparison of integer expressions of different signedness: 'int' and 'BALL::Size' {aka 'unsigned int'} [-Wsign-compare]
 1726 |   if ((&box < &box_[0]) || (&box - &box_[0]  >= getSize()))
      |                            ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~
[ 79%] Linking CXX executable ../../../bin/TOOLS/PocketDetector
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_link_script CMakeFiles/PocketDetector.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/PocketDetector.dir/PocketDetector_autogen/mocs_compilation.cpp.o CMakeFiles/PocketDetector.dir/PocketDetector.C.o -o ../../../bin/TOOLS/PocketDetector  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../../../lib/libBALL.so.1.5 /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 79%] Built target PocketDetector
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/Predictor_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/Predictor_autogen.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/Predictor_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target Predictor_autogen
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/Predictor_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/Predictor_autogen.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 79%] Automatic MOC for target Predictor
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/Predictor_autogen.dir/AutogenInfo.json Release
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 79%] Built target Predictor_autogen
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/Predictor.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/Predictor.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/Predictor.dir/DependInfo.cmake --color=
Scanning dependencies of target Predictor
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/Predictor.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/Predictor.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 81%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/Predictor.dir/Predictor_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/Predictor_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/Predictor.dir/Predictor_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/Predictor_autogen/mocs_compilation.cpp
[ 81%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/Predictor.dir/Predictor.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/Predictor_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/Predictor.dir/Predictor.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/Predictor.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/modelFactory.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/registry.h:5,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/Predictor.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/commandlineParser.h:4,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/Predictor.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/modelFactory.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/registry.h:5,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/Predictor.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/commandlineParser.h:4,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/Predictor.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/modelFactory.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/registry.h:5,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/Predictor.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/commandlineParser.h:4,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/Predictor.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 81%] Linking CXX executable ../../../bin/TOOLS/Predictor
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_link_script CMakeFiles/Predictor.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Predictor.dir/Predictor_autogen/mocs_compilation.cpp.o CMakeFiles/Predictor.dir/Predictor.C.o -o ../../../bin/TOOLS/Predictor  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../../../lib/libBALL.so.1.5 /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 81%] Built target Predictor
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/RMSDCalculator_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/RMSDCalculator_autogen.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/RMSDCalculator_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target RMSDCalculator_autogen
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/RMSDCalculator_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/RMSDCalculator_autogen.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 83%] Automatic MOC for target RMSDCalculator
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/RMSDCalculator_autogen.dir/AutogenInfo.json Release
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 83%] Built target RMSDCalculator_autogen
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/RMSDCalculator.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/RMSDCalculator.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/RMSDCalculator.dir/DependInfo.cmake --color=
Scanning dependencies of target RMSDCalculator
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/RMSDCalculator.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/RMSDCalculator.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 83%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/RMSDCalculator.dir/RMSDCalculator_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/RMSDCalculator_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/RMSDCalculator.dir/RMSDCalculator_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/RMSDCalculator_autogen/mocs_compilation.cpp
[ 83%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/RMSDCalculator.dir/RMSDCalculator.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/RMSDCalculator_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/RMSDCalculator.dir/RMSDCalculator.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/RMSDCalculator.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/secondaryStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBdefs.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/RMSDCalculator.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/RMSDCalculator.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/secondaryStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBdefs.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/RMSDCalculator.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/RMSDCalculator.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/secondaryStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBdefs.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/RMSDCalculator.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/RMSDCalculator.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 83%] Linking CXX executable ../../../bin/TOOLS/RMSDCalculator
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_link_script CMakeFiles/RMSDCalculator.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/RMSDCalculator.dir/RMSDCalculator_autogen/mocs_compilation.cpp.o CMakeFiles/RMSDCalculator.dir/RMSDCalculator.C.o -o ../../../bin/TOOLS/RMSDCalculator  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../../../lib/libBALL.so.1.5 /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 83%] Built target RMSDCalculator
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/SeparateMolecules_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/SeparateMolecules_autogen.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/SeparateMolecules_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target SeparateMolecules_autogen
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/SeparateMolecules_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/SeparateMolecules_autogen.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 83%] Automatic MOC for target SeparateMolecules
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/SeparateMolecules_autogen.dir/AutogenInfo.json Release
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 83%] Built target SeparateMolecules_autogen
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/SeparateMolecules.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/SeparateMolecules.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/SeparateMolecules.dir/DependInfo.cmake --color=
Scanning dependencies of target SeparateMolecules
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/SeparateMolecules.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/SeparateMolecules.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 83%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/SeparateMolecules.dir/SeparateMolecules_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/SeparateMolecules_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/SeparateMolecules.dir/SeparateMolecules_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/SeparateMolecules_autogen/mocs_compilation.cpp
[ 83%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/SeparateMolecules.dir/SeparateMolecules.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/SeparateMolecules_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/SeparateMolecules.dir/SeparateMolecules.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/SeparateMolecules.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/MOL2File.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/SeparateMolecules.C:25:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/MOL2File.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/SeparateMolecules.C:25:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/MOL2File.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/SeparateMolecules.C:25:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/MOL2File.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/SeparateMolecules.C:25:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/MOL2File.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/SeparateMolecules.C:25:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/MOL2File.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/SeparateMolecules.C:25:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 83%] Linking CXX executable ../../../bin/TOOLS/SeparateMolecules
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_link_script CMakeFiles/SeparateMolecules.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/SeparateMolecules.dir/SeparateMolecules_autogen/mocs_compilation.cpp.o CMakeFiles/SeparateMolecules.dir/SeparateMolecules.C.o -o ../../../bin/TOOLS/SeparateMolecules  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../../../lib/libBALL.so.1.5 /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 83%] Built target SeparateMolecules
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/SideChainGridBuilder_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/SideChainGridBuilder_autogen.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/SideChainGridBuilder_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target SideChainGridBuilder_autogen
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/SideChainGridBuilder_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/SideChainGridBuilder_autogen.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 83%] Automatic MOC for target SideChainGridBuilder
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/SideChainGridBuilder_autogen.dir/AutogenInfo.json Release
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 83%] Built target SideChainGridBuilder_autogen
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/SideChainGridBuilder.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/SideChainGridBuilder.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/SideChainGridBuilder.dir/DependInfo.cmake --color=
Scanning dependencies of target SideChainGridBuilder
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/SideChainGridBuilder.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/SideChainGridBuilder.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 83%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/SideChainGridBuilder.dir/SideChainGridBuilder_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/SideChainGridBuilder_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/SideChainGridBuilder.dir/SideChainGridBuilder_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/SideChainGridBuilder_autogen/mocs_compilation.cpp
[ 83%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/SideChainGridBuilder.dir/SideChainGridBuilder.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/SideChainGridBuilder_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/SideChainGridBuilder.dir/SideChainGridBuilder.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/SideChainGridBuilder.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/secondaryStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBdefs.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/SideChainGridBuilder.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/SideChainGridBuilder.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/secondaryStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBdefs.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/SideChainGridBuilder.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/SideChainGridBuilder.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/secondaryStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBdefs.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/SideChainGridBuilder.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/SideChainGridBuilder.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/SideChainGridBuilder.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94ParametersBase::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:43:3: note: in expansion of macro 'BALL_CREATE'
   43 |   BALL_CREATE(MMFF94ParametersBase)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/gridedPLP.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/SideChainGridBuilder.C:13:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/SideChainGridBuilder.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:3: note: in expansion of macro 'BALL_CREATE'
  217 |   BALL_CREATE(MMFF94StretchParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/gridedPLP.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/SideChainGridBuilder.C:13:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:226:34: note: because 'BALL::MMFF94StretchParameters' has user-provided 'const BALL::MMFF94StretchParameters& BALL::MMFF94StretchParameters::operator=(const BALL::MMFF94StretchParameters&)'
  226 |   const MMFF94StretchParameters& operator = (const MMFF94StretchParameters& param)
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:185:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  185 |  class BALL_EXPORT MMFF94StretchParameters:
      |                    ^~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/SideChainGridBuilder.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:3: note: in expansion of macro 'BALL_CREATE'
  217 |   BALL_CREATE(MMFF94StretchParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94BendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:3: note: in expansion of macro 'BALL_CREATE'
  271 |   BALL_CREATE(MMFF94BendParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/gridedPLP.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/SideChainGridBuilder.C:13:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:280:31: note: because 'BALL::MMFF94BendParameters' has user-provided 'const BALL::MMFF94BendParameters& BALL::MMFF94BendParameters::operator=(const BALL::MMFF94BendParameters&)'
  280 |   const MMFF94BendParameters& operator = (const MMFF94BendParameters& param)
      |                               ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:263:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  263 |  class BALL_EXPORT MMFF94BendParameters
      |                    ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/SideChainGridBuilder.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94BendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:3: note: in expansion of macro 'BALL_CREATE'
  271 |   BALL_CREATE(MMFF94BendParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:3: note: in expansion of macro 'BALL_CREATE'
  318 |   BALL_CREATE(MMFF94StretchBendParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/gridedPLP.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/SideChainGridBuilder.C:13:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:327:38: note: because 'BALL::MMFF94StretchBendParameters' has user-provided 'const BALL::MMFF94StretchBendParameters& BALL::MMFF94StretchBendParameters::operator=(const BALL::MMFF94StretchBendParameters&)'
  327 |   const MMFF94StretchBendParameters& operator = (const MMFF94StretchBendParameters& param)
      |                                      ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:310:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  310 |  class BALL_EXPORT MMFF94StretchBendParameters
      |                    ^~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/SideChainGridBuilder.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:3: note: in expansion of macro 'BALL_CREATE'
  318 |   BALL_CREATE(MMFF94StretchBendParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:3: note: in expansion of macro 'BALL_CREATE'
  374 |   BALL_CREATE(MMFF94TorsionParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/gridedPLP.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/SideChainGridBuilder.C:13:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:383:34: note: because 'BALL::MMFF94TorsionParameters' has user-provided 'const BALL::MMFF94TorsionParameters& BALL::MMFF94TorsionParameters::operator=(const BALL::MMFF94TorsionParameters&)'
  383 |   const MMFF94TorsionParameters& operator = (const MMFF94TorsionParameters& param)
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:366:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  366 |  class BALL_EXPORT MMFF94TorsionParameters
      |                    ^~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/SideChainGridBuilder.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:3: note: in expansion of macro 'BALL_CREATE'
  374 |   BALL_CREATE(MMFF94TorsionParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:3: note: in expansion of macro 'BALL_CREATE'
  422 |   BALL_CREATE(MMFF94PlaneParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/gridedPLP.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/SideChainGridBuilder.C:13:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:431:32: note: because 'BALL::MMFF94PlaneParameters' has user-provided 'const BALL::MMFF94PlaneParameters& BALL::MMFF94PlaneParameters::operator=(const BALL::MMFF94PlaneParameters&)'
  431 |   const MMFF94PlaneParameters& operator = (const MMFF94PlaneParameters& param)
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:414:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  414 |  class BALL_EXPORT MMFF94PlaneParameters
      |                    ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/SideChainGridBuilder.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:3: note: in expansion of macro 'BALL_CREATE'
  422 |   BALL_CREATE(MMFF94PlaneParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:3: note: in expansion of macro 'BALL_CREATE'
  473 |   BALL_CREATE(MMFF94VDWParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/gridedPLP.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/SideChainGridBuilder.C:13:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:482:30: note: because 'BALL::MMFF94VDWParameters' has user-provided 'const BALL::MMFF94VDWParameters& BALL::MMFF94VDWParameters::operator=(const BALL::MMFF94VDWParameters&)'
  482 |   const MMFF94VDWParameters& operator = (const MMFF94VDWParameters& param)
      |                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:458:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  458 |  class BALL_EXPORT MMFF94VDWParameters
      |                    ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/SideChainGridBuilder.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:3: note: in expansion of macro 'BALL_CREATE'
  473 |   BALL_CREATE(MMFF94VDWParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94ESParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:3: note: in expansion of macro 'BALL_CREATE'
  530 |   BALL_CREATE(MMFF94ESParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/gridedPLP.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/SideChainGridBuilder.C:13:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:539:29: note: because 'BALL::MMFF94ESParameters' has user-provided 'const BALL::MMFF94ESParameters& BALL::MMFF94ESParameters::operator=(const BALL::MMFF94ESParameters&)'
  539 |   const MMFF94ESParameters& operator = (const MMFF94ESParameters& param)
      |                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:525:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  525 |  class BALL_EXPORT MMFF94ESParameters
      |                    ^~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/SideChainGridBuilder.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94ESParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:3: note: in expansion of macro 'BALL_CREATE'
  530 |   BALL_CREATE(MMFF94ESParameters)
      |   ^~~~~~~~~~~
[ 83%] Linking CXX executable ../../../bin/TOOLS/SideChainGridBuilder
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_link_script CMakeFiles/SideChainGridBuilder.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/SideChainGridBuilder.dir/SideChainGridBuilder_autogen/mocs_compilation.cpp.o CMakeFiles/SideChainGridBuilder.dir/SideChainGridBuilder.C.o -o ../../../bin/TOOLS/SideChainGridBuilder  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../../../lib/libBALL.so.1.5 /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 83%] Built target SideChainGridBuilder
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/ExtractClustersFromWardTree_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/ExtractClustersFromWardTree_autogen.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/ExtractClustersFromWardTree_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target ExtractClustersFromWardTree_autogen
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/ExtractClustersFromWardTree_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/ExtractClustersFromWardTree_autogen.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 83%] Automatic MOC for target ExtractClustersFromWardTree
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/ExtractClustersFromWardTree_autogen.dir/AutogenInfo.json Release
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 83%] Built target ExtractClustersFromWardTree_autogen
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/ExtractClustersFromWardTree.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/ExtractClustersFromWardTree.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/ExtractClustersFromWardTree.dir/DependInfo.cmake --color=
Scanning dependencies of target ExtractClustersFromWardTree
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/ExtractClustersFromWardTree.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/ExtractClustersFromWardTree.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 83%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/ExtractClustersFromWardTree.dir/ExtractClustersFromWardTree_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/ExtractClustersFromWardTree_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/ExtractClustersFromWardTree.dir/ExtractClustersFromWardTree_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/ExtractClustersFromWardTree_autogen/mocs_compilation.cpp
[ 84%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/ExtractClustersFromWardTree.dir/ExtractClustersFromWardTree.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/ExtractClustersFromWardTree_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/ExtractClustersFromWardTree.dir/ExtractClustersFromWardTree.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/ExtractClustersFromWardTree.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/conformationSet.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/poseClustering.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/ExtractClustersFromWardTree.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/poseClustering.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/ExtractClustersFromWardTree.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/conformationSet.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/poseClustering.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/ExtractClustersFromWardTree.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/poseClustering.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/ExtractClustersFromWardTree.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/conformationSet.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/poseClustering.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/ExtractClustersFromWardTree.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/poseClustering.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/ExtractClustersFromWardTree.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 84%] Linking CXX executable ../../../bin/TOOLS/ExtractClustersFromWardTree
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_link_script CMakeFiles/ExtractClustersFromWardTree.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/ExtractClustersFromWardTree.dir/ExtractClustersFromWardTree_autogen/mocs_compilation.cpp.o CMakeFiles/ExtractClustersFromWardTree.dir/ExtractClustersFromWardTree.C.o -o ../../../bin/TOOLS/ExtractClustersFromWardTree  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../../../lib/libBALL.so.1.5 /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 84%] Built target ExtractClustersFromWardTree
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/MolFilter_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/MolFilter_autogen.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/MolFilter_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target MolFilter_autogen
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/MolFilter_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/MolFilter_autogen.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 84%] Automatic MOC for target MolFilter
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/MolFilter_autogen.dir/AutogenInfo.json Release
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 84%] Built target MolFilter_autogen
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/MolFilter.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/MolFilter.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/MolFilter.dir/DependInfo.cmake --color=
Scanning dependencies of target MolFilter
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/MolFilter.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/MolFilter.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 84%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/MolFilter.dir/MolFilter_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/MolFilter_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/MolFilter.dir/MolFilter_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/MolFilter_autogen/mocs_compilation.cpp
[ 84%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/MolFilter.dir/MolFilter.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/MolFilter_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/MolFilter.dir/MolFilter.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/MolFilter.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/molecule.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/MolFilter.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/molecule.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/MolFilter.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/molecule.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/MolFilter.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/molecule.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/MolFilter.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/molecule.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/MolFilter.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/molecule.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/MolFilter.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/MolFilter.C: In function 'int main(int, char**)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/MolFilter.C:44:9: warning: variable 'min_logP' set but not used [-Wunused-but-set-variable]
   44 |  double min_logP = 0;
      |         ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/MolFilter.C:45:9: warning: variable 'max_logP' set but not used [-Wunused-but-set-variable]
   45 |  double max_logP = 20;
      |         ^~~~~~~~
[ 84%] Linking CXX executable ../../../bin/TOOLS/MolFilter
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_link_script CMakeFiles/MolFilter.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/MolFilter.dir/MolFilter_autogen/mocs_compilation.cpp.o CMakeFiles/MolFilter.dir/MolFilter.C.o -o ../../../bin/TOOLS/MolFilter  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../../../lib/libBALL.so.1.5 /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 84%] Built target MolFilter
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/SLICK_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/SLICK_autogen.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/SLICK_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target SLICK_autogen
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/SLICK_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/SLICK_autogen.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 84%] Automatic MOC for target SLICK
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/SLICK_autogen.dir/AutogenInfo.json Release
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 84%] Built target SLICK_autogen
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/SLICK.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/SLICK.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/SLICK.dir/DependInfo.cmake --color=
Scanning dependencies of target SLICK
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/SLICK.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/SLICK.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 86%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/SLICK.dir/SLICK_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/SLICK_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/SLICK.dir/SLICK_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/SLICK_autogen/mocs_compilation.cpp
[ 86%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/SLICK.dir/SLICK.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/SLICK_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/SLICK.dir/SLICK.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/SLICK.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/slickEnergy.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/SLICK.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/slickEnergy.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/SLICK.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/slickEnergy.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/SLICK.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/slickEnergy.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/SLICK.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/slickEnergy.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/SLICK.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/slickEnergy.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/SLICK.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/SLICK.C: In function 'int main(int, char**)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/SLICK.C:216:29: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  216 |  for (it = system.beginAtom(); +it; ++it)
      |                             ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/slickEnergy.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/SLICK.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/SLICK.C: In function 'int main(int, char**)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/SLICK.C:216:29: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' first required here
  216 |  for (it = system.beginAtom(); +it; ++it)
      |                             ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/SLICK.C:237:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  237 |   for (it = protein->beginAtom(); +it; ++it)
      |                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/slickEnergy.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/SLICK.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/SLICK.C:249:31: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  249 |   for (it = ligand->beginAtom(); +it; ++it)
      |                               ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/slickEnergy.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/SLICK.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 86%] Linking CXX executable ../../../bin/TOOLS/SLICK
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_link_script CMakeFiles/SLICK.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/SLICK.dir/SLICK_autogen/mocs_compilation.cpp.o CMakeFiles/SLICK.dir/SLICK.C.o -o ../../../bin/TOOLS/SLICK  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../../../lib/libBALL.so.1.5 /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 86%] Built target SLICK
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/SpatialConstraintDefiner_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/SpatialConstraintDefiner_autogen.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/SpatialConstraintDefiner_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target SpatialConstraintDefiner_autogen
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/SpatialConstraintDefiner_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/SpatialConstraintDefiner_autogen.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 86%] Automatic MOC for target SpatialConstraintDefiner
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/SpatialConstraintDefiner_autogen.dir/AutogenInfo.json Release
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 86%] Built target SpatialConstraintDefiner_autogen
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/SpatialConstraintDefiner.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/SpatialConstraintDefiner.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/SpatialConstraintDefiner.dir/DependInfo.cmake --color=
Scanning dependencies of target SpatialConstraintDefiner
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/SpatialConstraintDefiner.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/SpatialConstraintDefiner.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 86%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/SpatialConstraintDefiner.dir/SpatialConstraintDefiner_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/SpatialConstraintDefiner_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/SpatialConstraintDefiner.dir/SpatialConstraintDefiner_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/SpatialConstraintDefiner_autogen/mocs_compilation.cpp
[ 86%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/SpatialConstraintDefiner.dir/SpatialConstraintDefiner.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/SpatialConstraintDefiner_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/SpatialConstraintDefiner.dir/SpatialConstraintDefiner.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/SpatialConstraintDefiner.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/constraints.h:22,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/SpatialConstraintDefiner.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/commandlineParser.h:4,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/SpatialConstraintDefiner.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/constraints.h:22,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/SpatialConstraintDefiner.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/commandlineParser.h:4,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/SpatialConstraintDefiner.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/constraints.h:22,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/SpatialConstraintDefiner.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/commandlineParser.h:4,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/SpatialConstraintDefiner.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 86%] Linking CXX executable ../../../bin/TOOLS/SpatialConstraintDefiner
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_link_script CMakeFiles/SpatialConstraintDefiner.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/SpatialConstraintDefiner.dir/SpatialConstraintDefiner_autogen/mocs_compilation.cpp.o CMakeFiles/SpatialConstraintDefiner.dir/SpatialConstraintDefiner.C.o -o ../../../bin/TOOLS/SpatialConstraintDefiner  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../../../lib/libBALL.so.1.5 /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 86%] Built target SpatialConstraintDefiner
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/FingerprintSimilarityClustering_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/FingerprintSimilarityClustering_autogen.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/FingerprintSimilarityClustering_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target FingerprintSimilarityClustering_autogen
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/FingerprintSimilarityClustering_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/FingerprintSimilarityClustering_autogen.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 86%] Automatic MOC for target FingerprintSimilarityClustering
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/FingerprintSimilarityClustering_autogen.dir/AutogenInfo.json Release
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 86%] Built target FingerprintSimilarityClustering_autogen
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/FingerprintSimilarityClustering.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/FingerprintSimilarityClustering.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/FingerprintSimilarityClustering.dir/DependInfo.cmake --color=
Scanning dependencies of target FingerprintSimilarityClustering
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/FingerprintSimilarityClustering.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/FingerprintSimilarityClustering.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 86%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/FingerprintSimilarityClustering.dir/FingerprintSimilarityClustering_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/FingerprintSimilarityClustering_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/FingerprintSimilarityClustering.dir/FingerprintSimilarityClustering_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/FingerprintSimilarityClustering_autogen/mocs_compilation.cpp
[ 86%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/FingerprintSimilarityClustering.dir/FingerprintSimilarityClustering.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/FingerprintSimilarityClustering_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/FingerprintSimilarityClustering.dir/FingerprintSimilarityClustering.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/FingerprintSimilarityClustering.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/molecule.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/FingerprintSimilarityClustering.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/commandlineParser.h:4,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/FingerprintSimilarityClustering.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/molecule.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/FingerprintSimilarityClustering.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/commandlineParser.h:4,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/FingerprintSimilarityClustering.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/molecule.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/FingerprintSimilarityClustering.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/commandlineParser.h:4,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/FingerprintSimilarityClustering.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 86%] Linking CXX executable ../../../bin/TOOLS/FingerprintSimilarityClustering
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_link_script CMakeFiles/FingerprintSimilarityClustering.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/FingerprintSimilarityClustering.dir/FingerprintSimilarityClustering_autogen/mocs_compilation.cpp.o CMakeFiles/FingerprintSimilarityClustering.dir/FingerprintSimilarityClustering.C.o -o ../../../bin/TOOLS/FingerprintSimilarityClustering  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../../../lib/libBALL.so.1.5 /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 86%] Built target FingerprintSimilarityClustering
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/ExtractProteinChains_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/ExtractProteinChains_autogen.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/ExtractProteinChains_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target ExtractProteinChains_autogen
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/ExtractProteinChains_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/ExtractProteinChains_autogen.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 86%] Automatic MOC for target ExtractProteinChains
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/ExtractProteinChains_autogen.dir/AutogenInfo.json Release
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 86%] Built target ExtractProteinChains_autogen
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/ExtractProteinChains.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/ExtractProteinChains.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/ExtractProteinChains.dir/DependInfo.cmake --color=
Scanning dependencies of target ExtractProteinChains
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/ExtractProteinChains.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/ExtractProteinChains.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 86%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/ExtractProteinChains.dir/ExtractProteinChains_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/ExtractProteinChains_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/ExtractProteinChains.dir/ExtractProteinChains_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/ExtractProteinChains_autogen/mocs_compilation.cpp
[ 86%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/ExtractProteinChains.dir/ExtractProteinChains.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/ExtractProteinChains_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/ExtractProteinChains.dir/ExtractProteinChains.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/ExtractProteinChains.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/secondaryStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBdefs.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/ExtractProteinChains.C:4:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/ExtractProteinChains.C:4:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/secondaryStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBdefs.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/ExtractProteinChains.C:4:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/ExtractProteinChains.C:4:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/secondaryStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBdefs.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/ExtractProteinChains.C:4:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/ExtractProteinChains.C:4:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 86%] Linking CXX executable ../../../bin/TOOLS/ExtractProteinChains
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_link_script CMakeFiles/ExtractProteinChains.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/ExtractProteinChains.dir/ExtractProteinChains_autogen/mocs_compilation.cpp.o CMakeFiles/ExtractProteinChains.dir/ExtractProteinChains.C.o -o ../../../bin/TOOLS/ExtractProteinChains  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../../../lib/libBALL.so.1.5 /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 86%] Built target ExtractProteinChains
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/TaGRes_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/TaGRes_autogen.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/TaGRes_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target TaGRes_autogen
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/TaGRes_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/TaGRes_autogen.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 86%] Automatic MOC for target TaGRes
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/TaGRes_autogen.dir/AutogenInfo.json Release
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 86%] Built target TaGRes_autogen
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/TaGRes.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/TaGRes.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/TaGRes.dir/DependInfo.cmake --color=
Scanning dependencies of target TaGRes
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/TaGRes.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/TaGRes.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 86%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/TaGRes.dir/TaGRes_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/TaGRes_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/TaGRes.dir/TaGRes_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/TaGRes_autogen/mocs_compilation.cpp
[ 86%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/TaGRes.dir/TaGRes.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/TaGRes_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/TaGRes.dir/TaGRes.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/TaGRes.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/secondaryStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBdefs.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/dockResultFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/TaGRes.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/dockResultFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/TaGRes.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/secondaryStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBdefs.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/dockResultFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/TaGRes.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/dockResultFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/TaGRes.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/secondaryStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBdefs.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/dockResultFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/TaGRes.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/dockResultFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/TaGRes.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/string.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SYSTEM/file.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/molFileFactory.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/TaGRes.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94ParametersBase::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:43:3: note: in expansion of macro 'BALL_CREATE'
   43 |   BALL_CREATE(MMFF94ParametersBase)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/gridedPLP.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/TaGRes.C:13:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/string.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SYSTEM/file.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/molFileFactory.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/TaGRes.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:3: note: in expansion of macro 'BALL_CREATE'
  217 |   BALL_CREATE(MMFF94StretchParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/gridedPLP.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/TaGRes.C:13:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:226:34: note: because 'BALL::MMFF94StretchParameters' has user-provided 'const BALL::MMFF94StretchParameters& BALL::MMFF94StretchParameters::operator=(const BALL::MMFF94StretchParameters&)'
  226 |   const MMFF94StretchParameters& operator = (const MMFF94StretchParameters& param)
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:185:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  185 |  class BALL_EXPORT MMFF94StretchParameters:
      |                    ^~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/string.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SYSTEM/file.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/molFileFactory.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/TaGRes.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:3: note: in expansion of macro 'BALL_CREATE'
  217 |   BALL_CREATE(MMFF94StretchParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94BendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:3: note: in expansion of macro 'BALL_CREATE'
  271 |   BALL_CREATE(MMFF94BendParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/gridedPLP.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/TaGRes.C:13:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:280:31: note: because 'BALL::MMFF94BendParameters' has user-provided 'const BALL::MMFF94BendParameters& BALL::MMFF94BendParameters::operator=(const BALL::MMFF94BendParameters&)'
  280 |   const MMFF94BendParameters& operator = (const MMFF94BendParameters& param)
      |                               ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:263:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  263 |  class BALL_EXPORT MMFF94BendParameters
      |                    ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/string.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SYSTEM/file.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/molFileFactory.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/TaGRes.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94BendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:3: note: in expansion of macro 'BALL_CREATE'
  271 |   BALL_CREATE(MMFF94BendParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:3: note: in expansion of macro 'BALL_CREATE'
  318 |   BALL_CREATE(MMFF94StretchBendParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/gridedPLP.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/TaGRes.C:13:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:327:38: note: because 'BALL::MMFF94StretchBendParameters' has user-provided 'const BALL::MMFF94StretchBendParameters& BALL::MMFF94StretchBendParameters::operator=(const BALL::MMFF94StretchBendParameters&)'
  327 |   const MMFF94StretchBendParameters& operator = (const MMFF94StretchBendParameters& param)
      |                                      ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:310:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  310 |  class BALL_EXPORT MMFF94StretchBendParameters
      |                    ^~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/string.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SYSTEM/file.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/molFileFactory.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/TaGRes.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:3: note: in expansion of macro 'BALL_CREATE'
  318 |   BALL_CREATE(MMFF94StretchBendParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:3: note: in expansion of macro 'BALL_CREATE'
  374 |   BALL_CREATE(MMFF94TorsionParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/gridedPLP.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/TaGRes.C:13:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:383:34: note: because 'BALL::MMFF94TorsionParameters' has user-provided 'const BALL::MMFF94TorsionParameters& BALL::MMFF94TorsionParameters::operator=(const BALL::MMFF94TorsionParameters&)'
  383 |   const MMFF94TorsionParameters& operator = (const MMFF94TorsionParameters& param)
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:366:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  366 |  class BALL_EXPORT MMFF94TorsionParameters
      |                    ^~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/string.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SYSTEM/file.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/molFileFactory.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/TaGRes.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:3: note: in expansion of macro 'BALL_CREATE'
  374 |   BALL_CREATE(MMFF94TorsionParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:3: note: in expansion of macro 'BALL_CREATE'
  422 |   BALL_CREATE(MMFF94PlaneParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/gridedPLP.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/TaGRes.C:13:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:431:32: note: because 'BALL::MMFF94PlaneParameters' has user-provided 'const BALL::MMFF94PlaneParameters& BALL::MMFF94PlaneParameters::operator=(const BALL::MMFF94PlaneParameters&)'
  431 |   const MMFF94PlaneParameters& operator = (const MMFF94PlaneParameters& param)
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:414:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  414 |  class BALL_EXPORT MMFF94PlaneParameters
      |                    ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/string.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SYSTEM/file.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/molFileFactory.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/TaGRes.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:3: note: in expansion of macro 'BALL_CREATE'
  422 |   BALL_CREATE(MMFF94PlaneParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:3: note: in expansion of macro 'BALL_CREATE'
  473 |   BALL_CREATE(MMFF94VDWParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/gridedPLP.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/TaGRes.C:13:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:482:30: note: because 'BALL::MMFF94VDWParameters' has user-provided 'const BALL::MMFF94VDWParameters& BALL::MMFF94VDWParameters::operator=(const BALL::MMFF94VDWParameters&)'
  482 |   const MMFF94VDWParameters& operator = (const MMFF94VDWParameters& param)
      |                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:458:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  458 |  class BALL_EXPORT MMFF94VDWParameters
      |                    ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/string.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SYSTEM/file.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/molFileFactory.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/TaGRes.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:3: note: in expansion of macro 'BALL_CREATE'
  473 |   BALL_CREATE(MMFF94VDWParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94ESParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:3: note: in expansion of macro 'BALL_CREATE'
  530 |   BALL_CREATE(MMFF94ESParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/gridedPLP.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/TaGRes.C:13:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:539:29: note: because 'BALL::MMFF94ESParameters' has user-provided 'const BALL::MMFF94ESParameters& BALL::MMFF94ESParameters::operator=(const BALL::MMFF94ESParameters&)'
  539 |   const MMFF94ESParameters& operator = (const MMFF94ESParameters& param)
      |                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:525:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  525 |  class BALL_EXPORT MMFF94ESParameters
      |                    ^~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/string.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SYSTEM/file.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/molFileFactory.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/TaGRes.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94ESParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:3: note: in expansion of macro 'BALL_CREATE'
  530 |   BALL_CREATE(MMFF94ESParameters)
      |   ^~~~~~~~~~~
[ 88%] Linking CXX executable ../../../bin/TOOLS/TaGRes
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_link_script CMakeFiles/TaGRes.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/TaGRes.dir/TaGRes_autogen/mocs_compilation.cpp.o CMakeFiles/TaGRes.dir/TaGRes.C.o -o ../../../bin/TOOLS/TaGRes  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../../../lib/libBALL.so.1.5 /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 88%] Built target TaGRes
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/GridBuilder_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/GridBuilder_autogen.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/GridBuilder_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target GridBuilder_autogen
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/GridBuilder_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/GridBuilder_autogen.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 88%] Automatic MOC for target GridBuilder
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/GridBuilder_autogen.dir/AutogenInfo.json Release
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 88%] Built target GridBuilder_autogen
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/GridBuilder.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/GridBuilder.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/GridBuilder.dir/DependInfo.cmake --color=
Scanning dependencies of target GridBuilder
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/GridBuilder.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/GridBuilder.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 88%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/GridBuilder.dir/GridBuilder_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/GridBuilder_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/GridBuilder.dir/GridBuilder_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/GridBuilder_autogen/mocs_compilation.cpp
[ 88%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/GridBuilder.dir/GridBuilder.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/GridBuilder_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/GridBuilder.dir/GridBuilder.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/GridBuilder.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/secondaryStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBdefs.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/GridBuilder.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/GridBuilder.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/secondaryStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBdefs.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/GridBuilder.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/GridBuilder.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/secondaryStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBdefs.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/GridBuilder.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/GridBuilder.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/GridBuilder.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94ParametersBase::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:43:3: note: in expansion of macro 'BALL_CREATE'
   43 |   BALL_CREATE(MMFF94ParametersBase)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/gridedPLP.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/GridBuilder.C:13:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/GridBuilder.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:3: note: in expansion of macro 'BALL_CREATE'
  217 |   BALL_CREATE(MMFF94StretchParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/gridedPLP.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/GridBuilder.C:13:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:226:34: note: because 'BALL::MMFF94StretchParameters' has user-provided 'const BALL::MMFF94StretchParameters& BALL::MMFF94StretchParameters::operator=(const BALL::MMFF94StretchParameters&)'
  226 |   const MMFF94StretchParameters& operator = (const MMFF94StretchParameters& param)
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:185:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  185 |  class BALL_EXPORT MMFF94StretchParameters:
      |                    ^~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/GridBuilder.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:3: note: in expansion of macro 'BALL_CREATE'
  217 |   BALL_CREATE(MMFF94StretchParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94BendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:3: note: in expansion of macro 'BALL_CREATE'
  271 |   BALL_CREATE(MMFF94BendParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/gridedPLP.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/GridBuilder.C:13:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:280:31: note: because 'BALL::MMFF94BendParameters' has user-provided 'const BALL::MMFF94BendParameters& BALL::MMFF94BendParameters::operator=(const BALL::MMFF94BendParameters&)'
  280 |   const MMFF94BendParameters& operator = (const MMFF94BendParameters& param)
      |                               ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:263:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  263 |  class BALL_EXPORT MMFF94BendParameters
      |                    ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/GridBuilder.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94BendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:3: note: in expansion of macro 'BALL_CREATE'
  271 |   BALL_CREATE(MMFF94BendParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:3: note: in expansion of macro 'BALL_CREATE'
  318 |   BALL_CREATE(MMFF94StretchBendParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/gridedPLP.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/GridBuilder.C:13:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:327:38: note: because 'BALL::MMFF94StretchBendParameters' has user-provided 'const BALL::MMFF94StretchBendParameters& BALL::MMFF94StretchBendParameters::operator=(const BALL::MMFF94StretchBendParameters&)'
  327 |   const MMFF94StretchBendParameters& operator = (const MMFF94StretchBendParameters& param)
      |                                      ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:310:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  310 |  class BALL_EXPORT MMFF94StretchBendParameters
      |                    ^~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/GridBuilder.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:3: note: in expansion of macro 'BALL_CREATE'
  318 |   BALL_CREATE(MMFF94StretchBendParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:3: note: in expansion of macro 'BALL_CREATE'
  374 |   BALL_CREATE(MMFF94TorsionParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/gridedPLP.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/GridBuilder.C:13:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:383:34: note: because 'BALL::MMFF94TorsionParameters' has user-provided 'const BALL::MMFF94TorsionParameters& BALL::MMFF94TorsionParameters::operator=(const BALL::MMFF94TorsionParameters&)'
  383 |   const MMFF94TorsionParameters& operator = (const MMFF94TorsionParameters& param)
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:366:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  366 |  class BALL_EXPORT MMFF94TorsionParameters
      |                    ^~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/GridBuilder.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:3: note: in expansion of macro 'BALL_CREATE'
  374 |   BALL_CREATE(MMFF94TorsionParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:3: note: in expansion of macro 'BALL_CREATE'
  422 |   BALL_CREATE(MMFF94PlaneParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/gridedPLP.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/GridBuilder.C:13:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:431:32: note: because 'BALL::MMFF94PlaneParameters' has user-provided 'const BALL::MMFF94PlaneParameters& BALL::MMFF94PlaneParameters::operator=(const BALL::MMFF94PlaneParameters&)'
  431 |   const MMFF94PlaneParameters& operator = (const MMFF94PlaneParameters& param)
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:414:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  414 |  class BALL_EXPORT MMFF94PlaneParameters
      |                    ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/GridBuilder.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:3: note: in expansion of macro 'BALL_CREATE'
  422 |   BALL_CREATE(MMFF94PlaneParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:3: note: in expansion of macro 'BALL_CREATE'
  473 |   BALL_CREATE(MMFF94VDWParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/gridedPLP.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/GridBuilder.C:13:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:482:30: note: because 'BALL::MMFF94VDWParameters' has user-provided 'const BALL::MMFF94VDWParameters& BALL::MMFF94VDWParameters::operator=(const BALL::MMFF94VDWParameters&)'
  482 |   const MMFF94VDWParameters& operator = (const MMFF94VDWParameters& param)
      |                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:458:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  458 |  class BALL_EXPORT MMFF94VDWParameters
      |                    ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/GridBuilder.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:3: note: in expansion of macro 'BALL_CREATE'
  473 |   BALL_CREATE(MMFF94VDWParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94ESParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:3: note: in expansion of macro 'BALL_CREATE'
  530 |   BALL_CREATE(MMFF94ESParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/gridedPLP.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/GridBuilder.C:13:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:539:29: note: because 'BALL::MMFF94ESParameters' has user-provided 'const BALL::MMFF94ESParameters& BALL::MMFF94ESParameters::operator=(const BALL::MMFF94ESParameters&)'
  539 |   const MMFF94ESParameters& operator = (const MMFF94ESParameters& param)
      |                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:525:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  525 |  class BALL_EXPORT MMFF94ESParameters
      |                    ^~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/GridBuilder.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94ESParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:3: note: in expansion of macro 'BALL_CREATE'
  530 |   BALL_CREATE(MMFF94ESParameters)
      |   ^~~~~~~~~~~
[ 88%] Linking CXX executable ../../../bin/TOOLS/GridBuilder
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_link_script CMakeFiles/GridBuilder.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/GridBuilder.dir/GridBuilder_autogen/mocs_compilation.cpp.o CMakeFiles/GridBuilder.dir/GridBuilder.C.o -o ../../../bin/TOOLS/GridBuilder  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../../../lib/libBALL.so.1.5 /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 88%] Built target GridBuilder
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/TaGRes-train_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/TaGRes-train_autogen.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/TaGRes-train_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target TaGRes-train_autogen
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/TaGRes-train_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/TaGRes-train_autogen.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 88%] Automatic MOC for target TaGRes-train
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/TaGRes-train_autogen.dir/AutogenInfo.json Release
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 88%] Built target TaGRes-train_autogen
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/TaGRes-train.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/TaGRes-train.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/TaGRes-train.dir/DependInfo.cmake --color=
Scanning dependencies of target TaGRes-train
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/TaGRes-train.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/TaGRes-train.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 88%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/TaGRes-train.dir/TaGRes-train_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/TaGRes-train_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/TaGRes-train.dir/TaGRes-train_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/TaGRes-train_autogen/mocs_compilation.cpp
[ 88%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/TaGRes-train.dir/TaGRes-train.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/TaGRes-train_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/TaGRes-train.dir/TaGRes-train.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/TaGRes-train.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/secondaryStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBdefs.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/dockResultFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/TaGRes-train.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/dockResultFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/TaGRes-train.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/secondaryStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBdefs.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/dockResultFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/TaGRes-train.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/dockResultFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/TaGRes-train.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/secondaryStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBdefs.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/dockResultFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/TaGRes-train.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/dockResultFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/TaGRes-train.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/string.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SYSTEM/file.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/molFileFactory.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/TaGRes-train.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94ParametersBase::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:43:3: note: in expansion of macro 'BALL_CREATE'
   43 |   BALL_CREATE(MMFF94ParametersBase)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/gridedPLP.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/TaGRes-train.C:13:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/string.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SYSTEM/file.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/molFileFactory.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/TaGRes-train.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:3: note: in expansion of macro 'BALL_CREATE'
  217 |   BALL_CREATE(MMFF94StretchParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/gridedPLP.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/TaGRes-train.C:13:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:226:34: note: because 'BALL::MMFF94StretchParameters' has user-provided 'const BALL::MMFF94StretchParameters& BALL::MMFF94StretchParameters::operator=(const BALL::MMFF94StretchParameters&)'
  226 |   const MMFF94StretchParameters& operator = (const MMFF94StretchParameters& param)
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:185:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  185 |  class BALL_EXPORT MMFF94StretchParameters:
      |                    ^~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/string.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SYSTEM/file.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/molFileFactory.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/TaGRes-train.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:3: note: in expansion of macro 'BALL_CREATE'
  217 |   BALL_CREATE(MMFF94StretchParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94BendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:3: note: in expansion of macro 'BALL_CREATE'
  271 |   BALL_CREATE(MMFF94BendParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/gridedPLP.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/TaGRes-train.C:13:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:280:31: note: because 'BALL::MMFF94BendParameters' has user-provided 'const BALL::MMFF94BendParameters& BALL::MMFF94BendParameters::operator=(const BALL::MMFF94BendParameters&)'
  280 |   const MMFF94BendParameters& operator = (const MMFF94BendParameters& param)
      |                               ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:263:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  263 |  class BALL_EXPORT MMFF94BendParameters
      |                    ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/string.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SYSTEM/file.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/molFileFactory.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/TaGRes-train.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94BendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:3: note: in expansion of macro 'BALL_CREATE'
  271 |   BALL_CREATE(MMFF94BendParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:3: note: in expansion of macro 'BALL_CREATE'
  318 |   BALL_CREATE(MMFF94StretchBendParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/gridedPLP.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/TaGRes-train.C:13:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:327:38: note: because 'BALL::MMFF94StretchBendParameters' has user-provided 'const BALL::MMFF94StretchBendParameters& BALL::MMFF94StretchBendParameters::operator=(const BALL::MMFF94StretchBendParameters&)'
  327 |   const MMFF94StretchBendParameters& operator = (const MMFF94StretchBendParameters& param)
      |                                      ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:310:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  310 |  class BALL_EXPORT MMFF94StretchBendParameters
      |                    ^~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/string.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SYSTEM/file.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/molFileFactory.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/TaGRes-train.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:3: note: in expansion of macro 'BALL_CREATE'
  318 |   BALL_CREATE(MMFF94StretchBendParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:3: note: in expansion of macro 'BALL_CREATE'
  374 |   BALL_CREATE(MMFF94TorsionParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/gridedPLP.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/TaGRes-train.C:13:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:383:34: note: because 'BALL::MMFF94TorsionParameters' has user-provided 'const BALL::MMFF94TorsionParameters& BALL::MMFF94TorsionParameters::operator=(const BALL::MMFF94TorsionParameters&)'
  383 |   const MMFF94TorsionParameters& operator = (const MMFF94TorsionParameters& param)
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:366:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  366 |  class BALL_EXPORT MMFF94TorsionParameters
      |                    ^~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/string.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SYSTEM/file.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/molFileFactory.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/TaGRes-train.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:3: note: in expansion of macro 'BALL_CREATE'
  374 |   BALL_CREATE(MMFF94TorsionParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:3: note: in expansion of macro 'BALL_CREATE'
  422 |   BALL_CREATE(MMFF94PlaneParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/gridedPLP.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/TaGRes-train.C:13:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:431:32: note: because 'BALL::MMFF94PlaneParameters' has user-provided 'const BALL::MMFF94PlaneParameters& BALL::MMFF94PlaneParameters::operator=(const BALL::MMFF94PlaneParameters&)'
  431 |   const MMFF94PlaneParameters& operator = (const MMFF94PlaneParameters& param)
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:414:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  414 |  class BALL_EXPORT MMFF94PlaneParameters
      |                    ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/string.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SYSTEM/file.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/molFileFactory.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/TaGRes-train.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:3: note: in expansion of macro 'BALL_CREATE'
  422 |   BALL_CREATE(MMFF94PlaneParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:3: note: in expansion of macro 'BALL_CREATE'
  473 |   BALL_CREATE(MMFF94VDWParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/gridedPLP.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/TaGRes-train.C:13:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:482:30: note: because 'BALL::MMFF94VDWParameters' has user-provided 'const BALL::MMFF94VDWParameters& BALL::MMFF94VDWParameters::operator=(const BALL::MMFF94VDWParameters&)'
  482 |   const MMFF94VDWParameters& operator = (const MMFF94VDWParameters& param)
      |                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:458:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  458 |  class BALL_EXPORT MMFF94VDWParameters
      |                    ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/string.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SYSTEM/file.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/molFileFactory.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/TaGRes-train.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:3: note: in expansion of macro 'BALL_CREATE'
  473 |   BALL_CREATE(MMFF94VDWParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94ESParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:3: note: in expansion of macro 'BALL_CREATE'
  530 |   BALL_CREATE(MMFF94ESParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/gridedPLP.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/TaGRes-train.C:13:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:539:29: note: because 'BALL::MMFF94ESParameters' has user-provided 'const BALL::MMFF94ESParameters& BALL::MMFF94ESParameters::operator=(const BALL::MMFF94ESParameters&)'
  539 |   const MMFF94ESParameters& operator = (const MMFF94ESParameters& param)
      |                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:525:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  525 |  class BALL_EXPORT MMFF94ESParameters
      |                    ^~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/string.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SYSTEM/file.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/molFileFactory.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/TaGRes-train.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94ESParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:3: note: in expansion of macro 'BALL_CREATE'
  530 |   BALL_CREATE(MMFF94ESParameters)
      |   ^~~~~~~~~~~
[ 88%] Linking CXX executable ../../../bin/TOOLS/TaGRes-train
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_link_script CMakeFiles/TaGRes-train.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/TaGRes-train.dir/TaGRes-train_autogen/mocs_compilation.cpp.o CMakeFiles/TaGRes-train.dir/TaGRes-train.C.o -o ../../../bin/TOOLS/TaGRes-train  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../../../lib/libBALL.so.1.5 /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 88%] Built target TaGRes-train
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/TrajectoryFile2PDBSplitter_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/TrajectoryFile2PDBSplitter_autogen.dir/depend
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cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/TrajectoryFile2PDBSplitter_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target TrajectoryFile2PDBSplitter_autogen
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[ 88%] Automatic MOC for target TrajectoryFile2PDBSplitter
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/TrajectoryFile2PDBSplitter_autogen.dir/AutogenInfo.json Release
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 88%] Built target TrajectoryFile2PDBSplitter_autogen
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cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/TrajectoryFile2PDBSplitter.dir/DependInfo.cmake --color=
Scanning dependencies of target TrajectoryFile2PDBSplitter
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/TrajectoryFile2PDBSplitter.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/TrajectoryFile2PDBSplitter.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 88%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/TrajectoryFile2PDBSplitter.dir/TrajectoryFile2PDBSplitter_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/TrajectoryFile2PDBSplitter_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/TrajectoryFile2PDBSplitter.dir/TrajectoryFile2PDBSplitter_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/TrajectoryFile2PDBSplitter_autogen/mocs_compilation.cpp
[ 88%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/TrajectoryFile2PDBSplitter.dir/TrajectoryFile2PDBSplitter.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/TrajectoryFile2PDBSplitter_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/TrajectoryFile2PDBSplitter.dir/TrajectoryFile2PDBSplitter.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/TrajectoryFile2PDBSplitter.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/TrajectoryFile2PDBSplitter.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/TrajectoryFile2PDBSplitter.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/TrajectoryFile2PDBSplitter.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/TrajectoryFile2PDBSplitter.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/TrajectoryFile2PDBSplitter.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/TrajectoryFile2PDBSplitter.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 90%] Linking CXX executable ../../../bin/TOOLS/TrajectoryFile2PDBSplitter
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_link_script CMakeFiles/TrajectoryFile2PDBSplitter.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/TrajectoryFile2PDBSplitter.dir/TrajectoryFile2PDBSplitter_autogen/mocs_compilation.cpp.o CMakeFiles/TrajectoryFile2PDBSplitter.dir/TrajectoryFile2PDBSplitter.C.o -o ../../../bin/TOOLS/TrajectoryFile2PDBSplitter  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../../../lib/libBALL.so.1.5 /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 90%] Built target TrajectoryFile2PDBSplitter
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/Trajectory2RigidTransformation_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/Trajectory2RigidTransformation_autogen.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/Trajectory2RigidTransformation_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target Trajectory2RigidTransformation_autogen
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/Trajectory2RigidTransformation_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/Trajectory2RigidTransformation_autogen.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 90%] Automatic MOC for target Trajectory2RigidTransformation
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/Trajectory2RigidTransformation_autogen.dir/AutogenInfo.json Release
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 90%] Built target Trajectory2RigidTransformation_autogen
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/Trajectory2RigidTransformation.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/Trajectory2RigidTransformation.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/Trajectory2RigidTransformation.dir/DependInfo.cmake --color=
Scanning dependencies of target Trajectory2RigidTransformation
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/Trajectory2RigidTransformation.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/Trajectory2RigidTransformation.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 90%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/Trajectory2RigidTransformation.dir/Trajectory2RigidTransformation_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/Trajectory2RigidTransformation_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/Trajectory2RigidTransformation.dir/Trajectory2RigidTransformation_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/Trajectory2RigidTransformation_autogen/mocs_compilation.cpp
[ 90%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/Trajectory2RigidTransformation.dir/Trajectory2RigidTransformation.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/Trajectory2RigidTransformation_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/Trajectory2RigidTransformation.dir/Trajectory2RigidTransformation.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/Trajectory2RigidTransformation.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/Trajectory2RigidTransformation.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/Trajectory2RigidTransformation.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/Trajectory2RigidTransformation.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/Trajectory2RigidTransformation.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/Trajectory2RigidTransformation.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS/Trajectory2RigidTransformation.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 90%] Linking CXX executable ../../../bin/TOOLS/Trajectory2RigidTransformation
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_link_script CMakeFiles/Trajectory2RigidTransformation.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Trajectory2RigidTransformation.dir/Trajectory2RigidTransformation_autogen/mocs_compilation.cpp.o CMakeFiles/Trajectory2RigidTransformation.dir/Trajectory2RigidTransformation.C.o -o ../../../bin/TOOLS/Trajectory2RigidTransformation  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../../../lib/libBALL.so.1.5 /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 90%] Built target Trajectory2RigidTransformation
make  -f source/APPLICATIONS/UTILITIES/CMakeFiles/solvent_accessibility_autogen.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/solvent_accessibility_autogen.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES/CMakeFiles/solvent_accessibility_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target solvent_accessibility_autogen
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/UTILITIES/CMakeFiles/solvent_accessibility_autogen.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/solvent_accessibility_autogen.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 90%] Automatic MOC for target solvent_accessibility
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES/CMakeFiles/solvent_accessibility_autogen.dir/AutogenInfo.json Release
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 90%] Built target solvent_accessibility_autogen
make  -f source/APPLICATIONS/UTILITIES/CMakeFiles/solvent_accessibility.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/solvent_accessibility.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES/CMakeFiles/solvent_accessibility.dir/DependInfo.cmake --color=
Scanning dependencies of target solvent_accessibility
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/UTILITIES/CMakeFiles/solvent_accessibility.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/solvent_accessibility.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 90%] Building CXX object source/APPLICATIONS/UTILITIES/CMakeFiles/solvent_accessibility.dir/solvent_accessibility_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES/solvent_accessibility_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/solvent_accessibility.dir/solvent_accessibility_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES/solvent_accessibility_autogen/mocs_compilation.cpp
[ 90%] Building CXX object source/APPLICATIONS/UTILITIES/CMakeFiles/solvent_accessibility.dir/solvent_accessibility.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES/solvent_accessibility_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/solvent_accessibility.dir/solvent_accessibility.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES/solvent_accessibility.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES/solvent_accessibility.C:15:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES/solvent_accessibility.C:15:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES/solvent_accessibility.C:15:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES/solvent_accessibility.C:15:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES/solvent_accessibility.C:15:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES/solvent_accessibility.C:15:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 90%] Linking CXX executable ../../../bin/UTILITIES/solvent_accessibility
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES && /usr/bin/cmake -E cmake_link_script CMakeFiles/solvent_accessibility.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/solvent_accessibility.dir/solvent_accessibility_autogen/mocs_compilation.cpp.o CMakeFiles/solvent_accessibility.dir/solvent_accessibility.C.o -o ../../../bin/UTILITIES/solvent_accessibility  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../../../lib/libBALL.so.1.5 /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 90%] Built target solvent_accessibility
make  -f source/APPLICATIONS/UTILITIES/CMakeFiles/reconstruct_fragment_autogen.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/reconstruct_fragment_autogen.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES/CMakeFiles/reconstruct_fragment_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target reconstruct_fragment_autogen
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/UTILITIES/CMakeFiles/reconstruct_fragment_autogen.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/reconstruct_fragment_autogen.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 90%] Automatic MOC for target reconstruct_fragment
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES/CMakeFiles/reconstruct_fragment_autogen.dir/AutogenInfo.json Release
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 90%] Built target reconstruct_fragment_autogen
make  -f source/APPLICATIONS/UTILITIES/CMakeFiles/reconstruct_fragment.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/reconstruct_fragment.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES/CMakeFiles/reconstruct_fragment.dir/DependInfo.cmake --color=
Scanning dependencies of target reconstruct_fragment
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/UTILITIES/CMakeFiles/reconstruct_fragment.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/reconstruct_fragment.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 90%] Building CXX object source/APPLICATIONS/UTILITIES/CMakeFiles/reconstruct_fragment.dir/reconstruct_fragment_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES/reconstruct_fragment_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/reconstruct_fragment.dir/reconstruct_fragment_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES/reconstruct_fragment_autogen/mocs_compilation.cpp
[ 90%] Building CXX object source/APPLICATIONS/UTILITIES/CMakeFiles/reconstruct_fragment.dir/reconstruct_fragment.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES/reconstruct_fragment_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/reconstruct_fragment.dir/reconstruct_fragment.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES/reconstruct_fragment.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/secondaryStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBdefs.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES/reconstruct_fragment.C:14:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES/reconstruct_fragment.C:14:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/secondaryStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBdefs.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES/reconstruct_fragment.C:14:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES/reconstruct_fragment.C:14:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/secondaryStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBdefs.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES/reconstruct_fragment.C:14:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES/reconstruct_fragment.C:14:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 90%] Linking CXX executable ../../../bin/UTILITIES/reconstruct_fragment
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES && /usr/bin/cmake -E cmake_link_script CMakeFiles/reconstruct_fragment.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/reconstruct_fragment.dir/reconstruct_fragment_autogen/mocs_compilation.cpp.o CMakeFiles/reconstruct_fragment.dir/reconstruct_fragment.C.o -o ../../../bin/UTILITIES/reconstruct_fragment  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../../../lib/libBALL.so.1.5 /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 90%] Built target reconstruct_fragment
make  -f source/APPLICATIONS/UTILITIES/CMakeFiles/pdb2hin_autogen.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/pdb2hin_autogen.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES/CMakeFiles/pdb2hin_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target pdb2hin_autogen
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/UTILITIES/CMakeFiles/pdb2hin_autogen.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/pdb2hin_autogen.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 90%] Automatic MOC for target pdb2hin
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES/CMakeFiles/pdb2hin_autogen.dir/AutogenInfo.json Release
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 90%] Built target pdb2hin_autogen
make  -f source/APPLICATIONS/UTILITIES/CMakeFiles/pdb2hin.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/pdb2hin.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES/CMakeFiles/pdb2hin.dir/DependInfo.cmake --color=
Scanning dependencies of target pdb2hin
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/UTILITIES/CMakeFiles/pdb2hin.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/pdb2hin.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 90%] Building CXX object source/APPLICATIONS/UTILITIES/CMakeFiles/pdb2hin.dir/pdb2hin_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES/pdb2hin_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/pdb2hin.dir/pdb2hin_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES/pdb2hin_autogen/mocs_compilation.cpp
[ 90%] Building CXX object source/APPLICATIONS/UTILITIES/CMakeFiles/pdb2hin.dir/pdb2hin.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES/pdb2hin_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/pdb2hin.dir/pdb2hin.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES/pdb2hin.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES/pdb2hin.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES/pdb2hin.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES/pdb2hin.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES/pdb2hin.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES/pdb2hin.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES/pdb2hin.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 90%] Linking CXX executable ../../../bin/UTILITIES/pdb2hin
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES && /usr/bin/cmake -E cmake_link_script CMakeFiles/pdb2hin.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/pdb2hin.dir/pdb2hin_autogen/mocs_compilation.cpp.o CMakeFiles/pdb2hin.dir/pdb2hin.C.o -o ../../../bin/UTILITIES/pdb2hin  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../../../lib/libBALL.so.1.5 /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 90%] Built target pdb2hin
make  -f source/APPLICATIONS/UTILITIES/CMakeFiles/pdb2dcd_autogen.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/pdb2dcd_autogen.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES/CMakeFiles/pdb2dcd_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target pdb2dcd_autogen
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/UTILITIES/CMakeFiles/pdb2dcd_autogen.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/pdb2dcd_autogen.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 90%] Automatic MOC for target pdb2dcd
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES/CMakeFiles/pdb2dcd_autogen.dir/AutogenInfo.json Release
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 90%] Built target pdb2dcd_autogen
make  -f source/APPLICATIONS/UTILITIES/CMakeFiles/pdb2dcd.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/pdb2dcd.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES/CMakeFiles/pdb2dcd.dir/DependInfo.cmake --color=
Scanning dependencies of target pdb2dcd
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/UTILITIES/CMakeFiles/pdb2dcd.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/pdb2dcd.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 90%] Building CXX object source/APPLICATIONS/UTILITIES/CMakeFiles/pdb2dcd.dir/pdb2dcd_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES/pdb2dcd_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/pdb2dcd.dir/pdb2dcd_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES/pdb2dcd_autogen/mocs_compilation.cpp
[ 90%] Building CXX object source/APPLICATIONS/UTILITIES/CMakeFiles/pdb2dcd.dir/pdb2dcd.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES/pdb2dcd_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/pdb2dcd.dir/pdb2dcd.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES/pdb2dcd.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES/pdb2dcd.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES/pdb2dcd.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES/pdb2dcd.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES/pdb2dcd.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES/pdb2dcd.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES/pdb2dcd.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 90%] Linking CXX executable ../../../bin/UTILITIES/pdb2dcd
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES && /usr/bin/cmake -E cmake_link_script CMakeFiles/pdb2dcd.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/pdb2dcd.dir/pdb2dcd_autogen/mocs_compilation.cpp.o CMakeFiles/pdb2dcd.dir/pdb2dcd.C.o -o ../../../bin/UTILITIES/pdb2dcd  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../../../lib/libBALL.so.1.5 /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 90%] Built target pdb2dcd
make  -f source/APPLICATIONS/UTILITIES/CMakeFiles/pdb2amber_naming_autogen.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/pdb2amber_naming_autogen.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES/CMakeFiles/pdb2amber_naming_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target pdb2amber_naming_autogen
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/UTILITIES/CMakeFiles/pdb2amber_naming_autogen.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/pdb2amber_naming_autogen.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 90%] Automatic MOC for target pdb2amber_naming
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES/CMakeFiles/pdb2amber_naming_autogen.dir/AutogenInfo.json Release
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 90%] Built target pdb2amber_naming_autogen
make  -f source/APPLICATIONS/UTILITIES/CMakeFiles/pdb2amber_naming.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/pdb2amber_naming.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES/CMakeFiles/pdb2amber_naming.dir/DependInfo.cmake --color=
Scanning dependencies of target pdb2amber_naming
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/UTILITIES/CMakeFiles/pdb2amber_naming.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/pdb2amber_naming.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 90%] Building CXX object source/APPLICATIONS/UTILITIES/CMakeFiles/pdb2amber_naming.dir/pdb2amber_naming_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES/pdb2amber_naming_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/pdb2amber_naming.dir/pdb2amber_naming_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES/pdb2amber_naming_autogen/mocs_compilation.cpp
[ 90%] Building CXX object source/APPLICATIONS/UTILITIES/CMakeFiles/pdb2amber_naming.dir/pdb2amber_naming.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES/pdb2amber_naming_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/pdb2amber_naming.dir/pdb2amber_naming.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES/pdb2amber_naming.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES/pdb2amber_naming.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES/pdb2amber_naming.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES/pdb2amber_naming.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES/pdb2amber_naming.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES/pdb2amber_naming.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES/pdb2amber_naming.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 90%] Linking CXX executable ../../../bin/UTILITIES/pdb2amber_naming
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES && /usr/bin/cmake -E cmake_link_script CMakeFiles/pdb2amber_naming.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/pdb2amber_naming.dir/pdb2amber_naming_autogen/mocs_compilation.cpp.o CMakeFiles/pdb2amber_naming.dir/pdb2amber_naming.C.o -o ../../../bin/UTILITIES/pdb2amber_naming  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../../../lib/libBALL.so.1.5 /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 90%] Built target pdb2amber_naming
make  -f source/APPLICATIONS/UTILITIES/CMakeFiles/add_hydrogens_autogen.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/add_hydrogens_autogen.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES/CMakeFiles/add_hydrogens_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target add_hydrogens_autogen
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/UTILITIES/CMakeFiles/add_hydrogens_autogen.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/add_hydrogens_autogen.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 90%] Automatic MOC for target add_hydrogens
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES/CMakeFiles/add_hydrogens_autogen.dir/AutogenInfo.json Release
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 90%] Built target add_hydrogens_autogen
make  -f source/APPLICATIONS/UTILITIES/CMakeFiles/add_hydrogens.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/add_hydrogens.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES/CMakeFiles/add_hydrogens.dir/DependInfo.cmake --color=
Scanning dependencies of target add_hydrogens
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/UTILITIES/CMakeFiles/add_hydrogens.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/add_hydrogens.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 90%] Building CXX object source/APPLICATIONS/UTILITIES/CMakeFiles/add_hydrogens.dir/add_hydrogens_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES/add_hydrogens_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/add_hydrogens.dir/add_hydrogens_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES/add_hydrogens_autogen/mocs_compilation.cpp
[ 90%] Building CXX object source/APPLICATIONS/UTILITIES/CMakeFiles/add_hydrogens.dir/add_hydrogens.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES/add_hydrogens_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/add_hydrogens.dir/add_hydrogens.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES/add_hydrogens.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES/add_hydrogens.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES/add_hydrogens.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES/add_hydrogens.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES/add_hydrogens.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES/add_hydrogens.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES/add_hydrogens.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 90%] Linking CXX executable ../../../bin/UTILITIES/add_hydrogens
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES && /usr/bin/cmake -E cmake_link_script CMakeFiles/add_hydrogens.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/add_hydrogens.dir/add_hydrogens_autogen/mocs_compilation.cpp.o CMakeFiles/add_hydrogens.dir/add_hydrogens.C.o -o ../../../bin/UTILITIES/add_hydrogens  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../../../lib/libBALL.so.1.5 /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 90%] Built target add_hydrogens
make  -f source/APPLICATIONS/UTILITIES/CMakeFiles/hin2mol2_autogen.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/hin2mol2_autogen.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES/CMakeFiles/hin2mol2_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target hin2mol2_autogen
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/UTILITIES/CMakeFiles/hin2mol2_autogen.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/hin2mol2_autogen.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 90%] Automatic MOC for target hin2mol2
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES/CMakeFiles/hin2mol2_autogen.dir/AutogenInfo.json Release
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 90%] Built target hin2mol2_autogen
make  -f source/APPLICATIONS/UTILITIES/CMakeFiles/hin2mol2.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/hin2mol2.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES/CMakeFiles/hin2mol2.dir/DependInfo.cmake --color=
Scanning dependencies of target hin2mol2
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/UTILITIES/CMakeFiles/hin2mol2.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/hin2mol2.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 90%] Building CXX object source/APPLICATIONS/UTILITIES/CMakeFiles/hin2mol2.dir/hin2mol2_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES/hin2mol2_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/hin2mol2.dir/hin2mol2_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES/hin2mol2_autogen/mocs_compilation.cpp
[ 90%] Building CXX object source/APPLICATIONS/UTILITIES/CMakeFiles/hin2mol2.dir/hin2mol2.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES/hin2mol2_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/hin2mol2.dir/hin2mol2.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES/hin2mol2.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES/hin2mol2.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES/hin2mol2.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES/hin2mol2.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES/hin2mol2.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES/hin2mol2.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES/hin2mol2.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 92%] Linking CXX executable ../../../bin/UTILITIES/hin2mol2
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES && /usr/bin/cmake -E cmake_link_script CMakeFiles/hin2mol2.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/hin2mol2.dir/hin2mol2_autogen/mocs_compilation.cpp.o CMakeFiles/hin2mol2.dir/hin2mol2.C.o -o ../../../bin/UTILITIES/hin2mol2  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../../../lib/libBALL.so.1.5 /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 92%] Built target hin2mol2
make  -f source/APPLICATIONS/UTILITIES/CMakeFiles/assign_bond_orders_autogen.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/assign_bond_orders_autogen.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES/CMakeFiles/assign_bond_orders_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target assign_bond_orders_autogen
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/UTILITIES/CMakeFiles/assign_bond_orders_autogen.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/assign_bond_orders_autogen.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 92%] Automatic MOC for target assign_bond_orders
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES/CMakeFiles/assign_bond_orders_autogen.dir/AutogenInfo.json Release
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 92%] Built target assign_bond_orders_autogen
make  -f source/APPLICATIONS/UTILITIES/CMakeFiles/assign_bond_orders.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/assign_bond_orders.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES/CMakeFiles/assign_bond_orders.dir/DependInfo.cmake --color=
Scanning dependencies of target assign_bond_orders
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/UTILITIES/CMakeFiles/assign_bond_orders.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/assign_bond_orders.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 92%] Building CXX object source/APPLICATIONS/UTILITIES/CMakeFiles/assign_bond_orders.dir/assign_bond_orders_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES/assign_bond_orders_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/assign_bond_orders.dir/assign_bond_orders_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES/assign_bond_orders_autogen/mocs_compilation.cpp
[ 92%] Building CXX object source/APPLICATIONS/UTILITIES/CMakeFiles/assign_bond_orders.dir/assign_bond_orders.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES/assign_bond_orders_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/assign_bond_orders.dir/assign_bond_orders.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES/assign_bond_orders.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES/assign_bond_orders.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES/assign_bond_orders.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES/assign_bond_orders.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES/assign_bond_orders.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES/assign_bond_orders.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES/assign_bond_orders.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 92%] Linking CXX executable ../../../bin/UTILITIES/assign_bond_orders
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES && /usr/bin/cmake -E cmake_link_script CMakeFiles/assign_bond_orders.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/assign_bond_orders.dir/assign_bond_orders_autogen/mocs_compilation.cpp.o CMakeFiles/assign_bond_orders.dir/assign_bond_orders.C.o -o ../../../bin/UTILITIES/assign_bond_orders  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../../../lib/libBALL.so.1.5 /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 92%] Built target assign_bond_orders
make  -f source/APPLICATIONS/UTILITIES/CMakeFiles/assign_positions_from_template_autogen.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/assign_positions_from_template_autogen.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES/CMakeFiles/assign_positions_from_template_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target assign_positions_from_template_autogen
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/UTILITIES/CMakeFiles/assign_positions_from_template_autogen.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/assign_positions_from_template_autogen.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 92%] Automatic MOC for target assign_positions_from_template
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES/CMakeFiles/assign_positions_from_template_autogen.dir/AutogenInfo.json Release
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 92%] Built target assign_positions_from_template_autogen
make  -f source/APPLICATIONS/UTILITIES/CMakeFiles/assign_positions_from_template.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/assign_positions_from_template.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES/CMakeFiles/assign_positions_from_template.dir/DependInfo.cmake --color=
Scanning dependencies of target assign_positions_from_template
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/UTILITIES/CMakeFiles/assign_positions_from_template.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/assign_positions_from_template.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 92%] Building CXX object source/APPLICATIONS/UTILITIES/CMakeFiles/assign_positions_from_template.dir/assign_positions_from_template_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES/assign_positions_from_template_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/assign_positions_from_template.dir/assign_positions_from_template_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES/assign_positions_from_template_autogen/mocs_compilation.cpp
[ 92%] Building CXX object source/APPLICATIONS/UTILITIES/CMakeFiles/assign_positions_from_template.dir/assign_positions_from_template.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES/assign_positions_from_template_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/assign_positions_from_template.dir/assign_positions_from_template.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES/assign_positions_from_template.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES/assign_positions_from_template.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES/assign_positions_from_template.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES/assign_positions_from_template.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES/assign_positions_from_template.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES/assign_positions_from_template.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES/assign_positions_from_template.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES/assign_positions_from_template.C: In function 'int main(int, char**)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES/assign_positions_from_template.C:75:37: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Chain, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ChainIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Chain, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ChainIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Chain, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ChainIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   75 |  ch_it = template_system.beginChain();
      |                                     ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES/assign_positions_from_template.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Chain, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ChainIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Chain; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::ChainIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Chain, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ChainIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Chain, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ChainIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Chain, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ChainIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Chain, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ChainIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Chain, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ChainIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Chain, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ChainIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Chain, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ChainIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Chain; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::ChainIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES/assign_positions_from_template.C: In function 'int main(int, char**)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES/assign_positions_from_template.C:75:37: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Chain, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ChainIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Chain, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ChainIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Chain, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ChainIteratorTraits>&)' first required here
   75 |  ch_it = template_system.beginChain();
      |                                     ^
[ 92%] Linking CXX executable ../../../bin/UTILITIES/assign_positions_from_template
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES && /usr/bin/cmake -E cmake_link_script CMakeFiles/assign_positions_from_template.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/assign_positions_from_template.dir/assign_positions_from_template_autogen/mocs_compilation.cpp.o CMakeFiles/assign_positions_from_template.dir/assign_positions_from_template.C.o -o ../../../bin/UTILITIES/assign_positions_from_template  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../../../lib/libBALL.so.1.5 /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 92%] Built target assign_positions_from_template
make  -f source/APPLICATIONS/UTILITIES/CMakeFiles/calculate_RMSD_autogen.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/calculate_RMSD_autogen.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES/CMakeFiles/calculate_RMSD_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target calculate_RMSD_autogen
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/UTILITIES/CMakeFiles/calculate_RMSD_autogen.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/calculate_RMSD_autogen.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 92%] Automatic MOC for target calculate_RMSD
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES/CMakeFiles/calculate_RMSD_autogen.dir/AutogenInfo.json Release
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 92%] Built target calculate_RMSD_autogen
make  -f source/APPLICATIONS/UTILITIES/CMakeFiles/calculate_RMSD.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/calculate_RMSD.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES/CMakeFiles/calculate_RMSD.dir/DependInfo.cmake --color=
Scanning dependencies of target calculate_RMSD
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/UTILITIES/CMakeFiles/calculate_RMSD.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/calculate_RMSD.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 92%] Building CXX object source/APPLICATIONS/UTILITIES/CMakeFiles/calculate_RMSD.dir/calculate_RMSD_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES/calculate_RMSD_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/calculate_RMSD.dir/calculate_RMSD_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES/calculate_RMSD_autogen/mocs_compilation.cpp
[ 92%] Building CXX object source/APPLICATIONS/UTILITIES/CMakeFiles/calculate_RMSD.dir/calculate_RMSD.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES/calculate_RMSD_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/calculate_RMSD.dir/calculate_RMSD.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES/calculate_RMSD.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/secondaryStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBdefs.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES/calculate_RMSD.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES/calculate_RMSD.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/secondaryStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBdefs.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES/calculate_RMSD.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES/calculate_RMSD.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/secondaryStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBdefs.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES/calculate_RMSD.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES/calculate_RMSD.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 92%] Linking CXX executable ../../../bin/UTILITIES/calculate_RMSD
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES && /usr/bin/cmake -E cmake_link_script CMakeFiles/calculate_RMSD.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/calculate_RMSD.dir/calculate_RMSD_autogen/mocs_compilation.cpp.o CMakeFiles/calculate_RMSD.dir/calculate_RMSD.C.o -o ../../../bin/UTILITIES/calculate_RMSD  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../../../lib/libBALL.so.1.5 /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 92%] Built target calculate_RMSD
make  -f source/APPLICATIONS/UTILITIES/CMakeFiles/atomtyper_autogen.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/atomtyper_autogen.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES/CMakeFiles/atomtyper_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target atomtyper_autogen
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/UTILITIES/CMakeFiles/atomtyper_autogen.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/atomtyper_autogen.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 92%] Automatic MOC for target atomtyper
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES/CMakeFiles/atomtyper_autogen.dir/AutogenInfo.json Release
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 92%] Built target atomtyper_autogen
make  -f source/APPLICATIONS/UTILITIES/CMakeFiles/atomtyper.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/atomtyper.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES/CMakeFiles/atomtyper.dir/DependInfo.cmake --color=
Scanning dependencies of target atomtyper
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/UTILITIES/CMakeFiles/atomtyper.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/atomtyper.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 92%] Building CXX object source/APPLICATIONS/UTILITIES/CMakeFiles/atomtyper.dir/atomtyper_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES/atomtyper_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/atomtyper.dir/atomtyper_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES/atomtyper_autogen/mocs_compilation.cpp
[ 92%] Building CXX object source/APPLICATIONS/UTILITIES/CMakeFiles/atomtyper.dir/atomtyper.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES/atomtyper_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/atomtyper.dir/atomtyper.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES/atomtyper.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES/atomtyper.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES/atomtyper.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES/atomtyper.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES/atomtyper.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES/atomtyper.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES/atomtyper.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 92%] Linking CXX executable ../../../bin/UTILITIES/atomtyper
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES && /usr/bin/cmake -E cmake_link_script CMakeFiles/atomtyper.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/atomtyper.dir/atomtyper_autogen/mocs_compilation.cpp.o CMakeFiles/atomtyper.dir/atomtyper.C.o -o ../../../bin/UTILITIES/atomtyper  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../../../lib/libBALL.so.1.5 /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 92%] Built target atomtyper
make  -f source/APPLICATIONS/UTILITIES/CMakeFiles/assign_charges_from_rules_autogen.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/assign_charges_from_rules_autogen.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES/CMakeFiles/assign_charges_from_rules_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target assign_charges_from_rules_autogen
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/UTILITIES/CMakeFiles/assign_charges_from_rules_autogen.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/assign_charges_from_rules_autogen.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 92%] Automatic MOC for target assign_charges_from_rules
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES/CMakeFiles/assign_charges_from_rules_autogen.dir/AutogenInfo.json Release
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 92%] Built target assign_charges_from_rules_autogen
make  -f source/APPLICATIONS/UTILITIES/CMakeFiles/assign_charges_from_rules.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/assign_charges_from_rules.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES/CMakeFiles/assign_charges_from_rules.dir/DependInfo.cmake --color=
Scanning dependencies of target assign_charges_from_rules
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/UTILITIES/CMakeFiles/assign_charges_from_rules.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/assign_charges_from_rules.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 92%] Building CXX object source/APPLICATIONS/UTILITIES/CMakeFiles/assign_charges_from_rules.dir/assign_charges_from_rules_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES/assign_charges_from_rules_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/assign_charges_from_rules.dir/assign_charges_from_rules_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES/assign_charges_from_rules_autogen/mocs_compilation.cpp
[ 92%] Building CXX object source/APPLICATIONS/UTILITIES/CMakeFiles/assign_charges_from_rules.dir/assign_charges_from_rules.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES/assign_charges_from_rules_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/assign_charges_from_rules.dir/assign_charges_from_rules.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES/assign_charges_from_rules.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES/assign_charges_from_rules.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES/assign_charges_from_rules.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES/assign_charges_from_rules.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES/assign_charges_from_rules.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES/assign_charges_from_rules.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES/assign_charges_from_rules.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 92%] Linking CXX executable ../../../bin/UTILITIES/assign_charges_from_rules
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES && /usr/bin/cmake -E cmake_link_script CMakeFiles/assign_charges_from_rules.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/assign_charges_from_rules.dir/assign_charges_from_rules_autogen/mocs_compilation.cpp.o CMakeFiles/assign_charges_from_rules.dir/assign_charges_from_rules.C.o -o ../../../bin/UTILITIES/assign_charges_from_rules  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../../../lib/libBALL.so.1.5 /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 92%] Built target assign_charges_from_rules
make  -f source/APPLICATIONS/UTILITIES/CMakeFiles/clip_protein_around_ligand_autogen.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/clip_protein_around_ligand_autogen.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES/CMakeFiles/clip_protein_around_ligand_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target clip_protein_around_ligand_autogen
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/UTILITIES/CMakeFiles/clip_protein_around_ligand_autogen.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/clip_protein_around_ligand_autogen.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 92%] Automatic MOC for target clip_protein_around_ligand
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES/CMakeFiles/clip_protein_around_ligand_autogen.dir/AutogenInfo.json Release
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 92%] Built target clip_protein_around_ligand_autogen
make  -f source/APPLICATIONS/UTILITIES/CMakeFiles/clip_protein_around_ligand.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/clip_protein_around_ligand.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES/CMakeFiles/clip_protein_around_ligand.dir/DependInfo.cmake --color=
Scanning dependencies of target clip_protein_around_ligand
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/UTILITIES/CMakeFiles/clip_protein_around_ligand.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/clip_protein_around_ligand.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 92%] Building CXX object source/APPLICATIONS/UTILITIES/CMakeFiles/clip_protein_around_ligand.dir/clip_protein_around_ligand_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES/clip_protein_around_ligand_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/clip_protein_around_ligand.dir/clip_protein_around_ligand_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES/clip_protein_around_ligand_autogen/mocs_compilation.cpp
[ 92%] Building CXX object source/APPLICATIONS/UTILITIES/CMakeFiles/clip_protein_around_ligand.dir/clip_protein_around_ligand.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES/clip_protein_around_ligand_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/clip_protein_around_ligand.dir/clip_protein_around_ligand.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES/clip_protein_around_ligand.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/secondaryStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBdefs.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES/clip_protein_around_ligand.C:13:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/simpleBox3.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/HINFile.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES/clip_protein_around_ligand.C:12:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/secondaryStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBdefs.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES/clip_protein_around_ligand.C:13:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/simpleBox3.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/HINFile.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES/clip_protein_around_ligand.C:12:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/secondaryStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBdefs.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES/clip_protein_around_ligand.C:13:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/simpleBox3.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/HINFile.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES/clip_protein_around_ligand.C:12:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES/clip_protein_around_ligand.C: In function 'int main(int, char**)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES/clip_protein_around_ligand.C:354:33: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  354 |   res_it = protein.beginResidue();
      |                                 ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/simpleBox3.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/HINFile.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES/clip_protein_around_ligand.C:12:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Residue; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::ResidueIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Residue; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::ResidueIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES/clip_protein_around_ligand.C: In function 'int main(int, char**)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES/clip_protein_around_ligand.C:354:33: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>&)' first required here
  354 |   res_it = protein.beginResidue();
      |                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES/clip_protein_around_ligand.C:358:35: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::PDBAtom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::PDBAtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::PDBAtom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::PDBAtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::PDBAtom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::PDBAtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  358 |    atom_it = res_it->beginPDBAtom();
      |                                   ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/simpleBox3.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/HINFile.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES/clip_protein_around_ligand.C:12:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::PDBAtom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::PDBAtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::PDBAtom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::PDBAtomIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::PDBAtom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::PDBAtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::PDBAtom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::PDBAtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::PDBAtom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::PDBAtomIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::PDBAtom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::PDBAtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::PDBAtom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::PDBAtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::PDBAtom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::PDBAtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::PDBAtom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::PDBAtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::PDBAtom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::PDBAtomIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES/clip_protein_around_ligand.C: In function 'int main(int, char**)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES/clip_protein_around_ligand.C:358:35: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::PDBAtom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::PDBAtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::PDBAtom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::PDBAtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::PDBAtom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::PDBAtomIteratorTraits>&)' first required here
  358 |    atom_it = res_it->beginPDBAtom();
      |                                   ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES/clip_protein_around_ligand.C:363:31: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  363 |     lig_it = ligand.beginAtom();
      |                               ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/simpleBox3.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/HINFile.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES/clip_protein_around_ligand.C:12:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES/clip_protein_around_ligand.C:419:22: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  419 |         tmp_res_it = res_it;
      |                      ^~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/simpleBox3.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/HINFile.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES/clip_protein_around_ligand.C:12:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Residue; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::ResidueIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES/clip_protein_around_ligand.C:490:40: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  490 |   for (res_it = chain_it->beginResidue(); +res_it; ++res_it)
      |                                        ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/simpleBox3.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/HINFile.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES/clip_protein_around_ligand.C:12:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Residue; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::ResidueIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES/clip_protein_around_ligand.C:542:20: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  542 |       tmp_res_it = res_it;
      |                    ^~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/simpleBox3.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/HINFile.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES/clip_protein_around_ligand.C:12:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Residue; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::ResidueIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES/clip_protein_around_ligand.C:652:42: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  652 |  for (res_it = cut_protein->beginResidue(); +res_it; ++res_it)
      |                                          ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/simpleBox3.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/HINFile.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES/clip_protein_around_ligand.C:12:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Residue; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::ResidueIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 92%] Linking CXX executable ../../../bin/UTILITIES/clip_protein_around_ligand
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES && /usr/bin/cmake -E cmake_link_script CMakeFiles/clip_protein_around_ligand.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/clip_protein_around_ligand.dir/clip_protein_around_ligand_autogen/mocs_compilation.cpp.o CMakeFiles/clip_protein_around_ligand.dir/clip_protein_around_ligand.C.o -o ../../../bin/UTILITIES/clip_protein_around_ligand  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../../../lib/libBALL.so.1.5 /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 92%] Built target clip_protein_around_ligand
make  -f source/APPLICATIONS/UTILITIES/CMakeFiles/compute_docking_RMSD_autogen.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/compute_docking_RMSD_autogen.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES/CMakeFiles/compute_docking_RMSD_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target compute_docking_RMSD_autogen
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/UTILITIES/CMakeFiles/compute_docking_RMSD_autogen.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/compute_docking_RMSD_autogen.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 92%] Automatic MOC for target compute_docking_RMSD
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES/CMakeFiles/compute_docking_RMSD_autogen.dir/AutogenInfo.json Release
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 92%] Built target compute_docking_RMSD_autogen
make  -f source/APPLICATIONS/UTILITIES/CMakeFiles/compute_docking_RMSD.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/compute_docking_RMSD.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES/CMakeFiles/compute_docking_RMSD.dir/DependInfo.cmake --color=
Scanning dependencies of target compute_docking_RMSD
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/UTILITIES/CMakeFiles/compute_docking_RMSD.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/compute_docking_RMSD.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 92%] Building CXX object source/APPLICATIONS/UTILITIES/CMakeFiles/compute_docking_RMSD.dir/compute_docking_RMSD_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES/compute_docking_RMSD_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/compute_docking_RMSD.dir/compute_docking_RMSD_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES/compute_docking_RMSD_autogen/mocs_compilation.cpp
[ 92%] Building CXX object source/APPLICATIONS/UTILITIES/CMakeFiles/compute_docking_RMSD.dir/compute_docking_RMSD.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES/compute_docking_RMSD_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/compute_docking_RMSD.dir/compute_docking_RMSD.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES/compute_docking_RMSD.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chain.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chainIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/protein.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES/compute_docking_RMSD.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chain.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chainIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/protein.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES/compute_docking_RMSD.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chain.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chainIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/protein.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES/compute_docking_RMSD.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chain.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chainIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/protein.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES/compute_docking_RMSD.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chain.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chainIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/protein.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES/compute_docking_RMSD.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chain.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chainIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/protein.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES/compute_docking_RMSD.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES/compute_docking_RMSD.C: In function 'int main(int, char**)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES/compute_docking_RMSD.C:86:30: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Chain, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ChainIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Chain, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ChainIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Chain, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ChainIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   86 |  for (pi = docked.beginChain(); +pi; ++pi)
      |                              ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chain.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chainIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/protein.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES/compute_docking_RMSD.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Chain, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ChainIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Chain; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::ChainIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Chain, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ChainIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Chain, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ChainIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Chain, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ChainIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Chain, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ChainIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Chain, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ChainIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Chain, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ChainIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Chain, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ChainIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Chain; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::ChainIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES/compute_docking_RMSD.C: In function 'int main(int, char**)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES/compute_docking_RMSD.C:86:30: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Chain, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ChainIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Chain, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ChainIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Chain, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ChainIteratorTraits>&)' first required here
   86 |  for (pi = docked.beginChain(); +pi; ++pi)
      |                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES/compute_docking_RMSD.C:153:31: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Chain, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ChainIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Chain, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ChainIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Chain, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ChainIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  153 |   for (pi = docked.beginChain(); +pi; ++pi)
      |                               ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chain.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chainIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/protein.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES/compute_docking_RMSD.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Chain, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ChainIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Chain; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::ChainIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES/compute_docking_RMSD.C:187:39: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  187 |   docked_atom=static_docked.beginAtom(), reference_atom=static_reference.beginAtom();
      |                                       ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chain.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chainIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/protein.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES/compute_docking_RMSD.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES/compute_docking_RMSD.C: In function 'int main(int, char**)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES/compute_docking_RMSD.C:187:39: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' first required here
  187 |   docked_atom=static_docked.beginAtom(), reference_atom=static_reference.beginAtom();
      |                                       ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES/compute_docking_RMSD.C:187:84: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  187 |   docked_atom=static_docked.beginAtom(), reference_atom=static_reference.beginAtom();
      |                                                                                    ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chain.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chainIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/protein.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES/compute_docking_RMSD.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 92%] Linking CXX executable ../../../bin/UTILITIES/compute_docking_RMSD
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES && /usr/bin/cmake -E cmake_link_script CMakeFiles/compute_docking_RMSD.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/compute_docking_RMSD.dir/compute_docking_RMSD_autogen/mocs_compilation.cpp.o CMakeFiles/compute_docking_RMSD.dir/compute_docking_RMSD.C.o -o ../../../bin/UTILITIES/compute_docking_RMSD  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../../../lib/libBALL.so.1.5 /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 92%] Built target compute_docking_RMSD
make  -f source/APPLICATIONS/UTILITIES/CMakeFiles/assign_radii_from_rules_autogen.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/assign_radii_from_rules_autogen.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES/CMakeFiles/assign_radii_from_rules_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target assign_radii_from_rules_autogen
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/UTILITIES/CMakeFiles/assign_radii_from_rules_autogen.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/assign_radii_from_rules_autogen.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 92%] Automatic MOC for target assign_radii_from_rules
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES/CMakeFiles/assign_radii_from_rules_autogen.dir/AutogenInfo.json Release
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 92%] Built target assign_radii_from_rules_autogen
make  -f source/APPLICATIONS/UTILITIES/CMakeFiles/assign_radii_from_rules.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/assign_radii_from_rules.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES/CMakeFiles/assign_radii_from_rules.dir/DependInfo.cmake --color=
Scanning dependencies of target assign_radii_from_rules
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/UTILITIES/CMakeFiles/assign_radii_from_rules.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/assign_radii_from_rules.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 94%] Building CXX object source/APPLICATIONS/UTILITIES/CMakeFiles/assign_radii_from_rules.dir/assign_radii_from_rules_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES/assign_radii_from_rules_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/assign_radii_from_rules.dir/assign_radii_from_rules_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES/assign_radii_from_rules_autogen/mocs_compilation.cpp
[ 94%] Building CXX object source/APPLICATIONS/UTILITIES/CMakeFiles/assign_radii_from_rules.dir/assign_radii_from_rules.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES/assign_radii_from_rules_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/assign_radii_from_rules.dir/assign_radii_from_rules.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES/assign_radii_from_rules.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES/assign_radii_from_rules.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES/assign_radii_from_rules.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES/assign_radii_from_rules.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES/assign_radii_from_rules.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES/assign_radii_from_rules.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES/assign_radii_from_rules.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 94%] Linking CXX executable ../../../bin/UTILITIES/assign_radii_from_rules
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES && /usr/bin/cmake -E cmake_link_script CMakeFiles/assign_radii_from_rules.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/assign_radii_from_rules.dir/assign_radii_from_rules_autogen/mocs_compilation.cpp.o CMakeFiles/assign_radii_from_rules.dir/assign_radii_from_rules.C.o -o ../../../bin/UTILITIES/assign_radii_from_rules  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../../../lib/libBALL.so.1.5 /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 94%] Built target assign_radii_from_rules
make  -f source/APPLICATIONS/UTILITIES/CMakeFiles/assign_typenames_from_rules_autogen.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/assign_typenames_from_rules_autogen.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES/CMakeFiles/assign_typenames_from_rules_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target assign_typenames_from_rules_autogen
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/UTILITIES/CMakeFiles/assign_typenames_from_rules_autogen.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/assign_typenames_from_rules_autogen.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 94%] Automatic MOC for target assign_typenames_from_rules
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES/CMakeFiles/assign_typenames_from_rules_autogen.dir/AutogenInfo.json Release
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 94%] Built target assign_typenames_from_rules_autogen
make  -f source/APPLICATIONS/UTILITIES/CMakeFiles/assign_typenames_from_rules.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/assign_typenames_from_rules.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES/CMakeFiles/assign_typenames_from_rules.dir/DependInfo.cmake --color=
Scanning dependencies of target assign_typenames_from_rules
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/UTILITIES/CMakeFiles/assign_typenames_from_rules.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/assign_typenames_from_rules.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 94%] Building CXX object source/APPLICATIONS/UTILITIES/CMakeFiles/assign_typenames_from_rules.dir/assign_typenames_from_rules_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES/assign_typenames_from_rules_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/assign_typenames_from_rules.dir/assign_typenames_from_rules_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES/assign_typenames_from_rules_autogen/mocs_compilation.cpp
[ 94%] Building CXX object source/APPLICATIONS/UTILITIES/CMakeFiles/assign_typenames_from_rules.dir/assign_typenames_from_rules.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES/assign_typenames_from_rules_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/assign_typenames_from_rules.dir/assign_typenames_from_rules.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES/assign_typenames_from_rules.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES/assign_typenames_from_rules.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES/assign_typenames_from_rules.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES/assign_typenames_from_rules.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES/assign_typenames_from_rules.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES/assign_typenames_from_rules.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES/assign_typenames_from_rules.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 94%] Linking CXX executable ../../../bin/UTILITIES/assign_typenames_from_rules
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES && /usr/bin/cmake -E cmake_link_script CMakeFiles/assign_typenames_from_rules.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/assign_typenames_from_rules.dir/assign_typenames_from_rules_autogen/mocs_compilation.cpp.o CMakeFiles/assign_typenames_from_rules.dir/assign_typenames_from_rules.C.o -o ../../../bin/UTILITIES/assign_typenames_from_rules  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../../../lib/libBALL.so.1.5 /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 94%] Built target assign_typenames_from_rules
make  -f source/APPLICATIONS/UTILITIES/CMakeFiles/dcd2dcd_autogen.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/dcd2dcd_autogen.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES/CMakeFiles/dcd2dcd_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target dcd2dcd_autogen
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/UTILITIES/CMakeFiles/dcd2dcd_autogen.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/dcd2dcd_autogen.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 94%] Automatic MOC for target dcd2dcd
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES/CMakeFiles/dcd2dcd_autogen.dir/AutogenInfo.json Release
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 94%] Built target dcd2dcd_autogen
make  -f source/APPLICATIONS/UTILITIES/CMakeFiles/dcd2dcd.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/dcd2dcd.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES/CMakeFiles/dcd2dcd.dir/DependInfo.cmake --color=
Scanning dependencies of target dcd2dcd
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/UTILITIES/CMakeFiles/dcd2dcd.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/dcd2dcd.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 94%] Building CXX object source/APPLICATIONS/UTILITIES/CMakeFiles/dcd2dcd.dir/dcd2dcd_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES/dcd2dcd_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/dcd2dcd.dir/dcd2dcd_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES/dcd2dcd_autogen/mocs_compilation.cpp
[ 94%] Building CXX object source/APPLICATIONS/UTILITIES/CMakeFiles/dcd2dcd.dir/dcd2dcd.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES/dcd2dcd_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/dcd2dcd.dir/dcd2dcd.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES/dcd2dcd.C
[ 94%] Linking CXX executable ../../../bin/UTILITIES/dcd2dcd
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES && /usr/bin/cmake -E cmake_link_script CMakeFiles/dcd2dcd.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/dcd2dcd.dir/dcd2dcd_autogen/mocs_compilation.cpp.o CMakeFiles/dcd2dcd.dir/dcd2dcd.C.o -o ../../../bin/UTILITIES/dcd2dcd  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../../../lib/libBALL.so.1.5 /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 94%] Built target dcd2dcd
make  -f source/APPLICATIONS/UTILITIES/CMakeFiles/export_fragment_autogen.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/export_fragment_autogen.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES/CMakeFiles/export_fragment_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target export_fragment_autogen
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/UTILITIES/CMakeFiles/export_fragment_autogen.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/export_fragment_autogen.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 94%] Automatic MOC for target export_fragment
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES/CMakeFiles/export_fragment_autogen.dir/AutogenInfo.json Release
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 94%] Built target export_fragment_autogen
make  -f source/APPLICATIONS/UTILITIES/CMakeFiles/export_fragment.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/export_fragment.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES/CMakeFiles/export_fragment.dir/DependInfo.cmake --color=
Scanning dependencies of target export_fragment
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/UTILITIES/CMakeFiles/export_fragment.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/export_fragment.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 94%] Building CXX object source/APPLICATIONS/UTILITIES/CMakeFiles/export_fragment.dir/export_fragment_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES/export_fragment_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/export_fragment.dir/export_fragment_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES/export_fragment_autogen/mocs_compilation.cpp
[ 94%] Building CXX object source/APPLICATIONS/UTILITIES/CMakeFiles/export_fragment.dir/export_fragment.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES/export_fragment_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/export_fragment.dir/export_fragment.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES/export_fragment.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES/export_fragment.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES/export_fragment.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES/export_fragment.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES/export_fragment.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES/export_fragment.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES/export_fragment.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES/export_fragment.C:12:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES/export_fragment.C: In function 'int main(int, char**)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:108:49: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  108 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES/export_fragment.C:92:2: note: in expansion of macro 'BALL_FOREACH_BOND'
   92 |  BALL_FOREACH_BOND(system, atom_it, bond_it)
      |  ^~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES/export_fragment.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES/export_fragment.C:12:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:110:51: warning: implicitly-declared 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  110 |   for (bond_iterator = (*atom_iterator).beginBond(); \
      |                                                   ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES/export_fragment.C:92:2: note: in expansion of macro 'BALL_FOREACH_BOND'
   92 |  BALL_FOREACH_BOND(system, atom_it, bond_it)
      |  ^~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES/export_fragment.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:47:15: note: because 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   47 |   BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:24:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   24 |  class ConstRandomAccessIterator
      |        ^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES/export_fragment.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES/export_fragment.C:12:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES/export_fragment.C: In function 'int main(int, char**)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:110:51: note: synthesized method 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' first required here
  110 |   for (bond_iterator = (*atom_iterator).beginBond(); \
      |                                                   ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES/export_fragment.C:92:2: note: in expansion of macro 'BALL_FOREACH_BOND'
   92 |  BALL_FOREACH_BOND(system, atom_it, bond_it)
      |  ^~~~~~~~~~~~~~~~~
[ 94%] Linking CXX executable ../../../bin/UTILITIES/export_fragment
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES && /usr/bin/cmake -E cmake_link_script CMakeFiles/export_fragment.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/export_fragment.dir/export_fragment_autogen/mocs_compilation.cpp.o CMakeFiles/export_fragment.dir/export_fragment.C.o -o ../../../bin/UTILITIES/export_fragment  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../../../lib/libBALL.so.1.5 /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 94%] Built target export_fragment
make  -f source/APPLICATIONS/UTILITIES/CMakeFiles/file_converter_autogen.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/file_converter_autogen.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES/CMakeFiles/file_converter_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target file_converter_autogen
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/UTILITIES/CMakeFiles/file_converter_autogen.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/file_converter_autogen.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 94%] Automatic MOC for target file_converter
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES/CMakeFiles/file_converter_autogen.dir/AutogenInfo.json Release
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 94%] Built target file_converter_autogen
make  -f source/APPLICATIONS/UTILITIES/CMakeFiles/file_converter.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/file_converter.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES/CMakeFiles/file_converter.dir/DependInfo.cmake --color=
Scanning dependencies of target file_converter
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/UTILITIES/CMakeFiles/file_converter.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/file_converter.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 94%] Building CXX object source/APPLICATIONS/UTILITIES/CMakeFiles/file_converter.dir/file_converter_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES/file_converter_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/file_converter.dir/file_converter_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES/file_converter_autogen/mocs_compilation.cpp
[ 94%] Building CXX object source/APPLICATIONS/UTILITIES/CMakeFiles/file_converter.dir/file_converter.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES/file_converter_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/file_converter.dir/file_converter.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES/file_converter.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES/file_converter.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES/file_converter.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES/file_converter.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES/file_converter.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES/file_converter.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES/file_converter.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 94%] Linking CXX executable ../../../bin/UTILITIES/file_converter
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES && /usr/bin/cmake -E cmake_link_script CMakeFiles/file_converter.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/file_converter.dir/file_converter_autogen/mocs_compilation.cpp.o CMakeFiles/file_converter.dir/file_converter.C.o -o ../../../bin/UTILITIES/file_converter  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../../../lib/libBALL.so.1.5 /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 94%] Built target file_converter
make  -f source/EXTENSIONS/PRESENTABALL/CMakeFiles/pluginPresentaBALL_autogen.dir/build.make source/EXTENSIONS/PRESENTABALL/CMakeFiles/pluginPresentaBALL_autogen.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/EXTENSIONS/PRESENTABALL /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/EXTENSIONS/PRESENTABALL /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/EXTENSIONS/PRESENTABALL/CMakeFiles/pluginPresentaBALL_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target pluginPresentaBALL_autogen
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/EXTENSIONS/PRESENTABALL/CMakeFiles/pluginPresentaBALL_autogen.dir/build.make source/EXTENSIONS/PRESENTABALL/CMakeFiles/pluginPresentaBALL_autogen.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 94%] Automatic MOC for target pluginPresentaBALL
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/EXTENSIONS/PRESENTABALL && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/EXTENSIONS/PRESENTABALL/CMakeFiles/pluginPresentaBALL_autogen.dir/AutogenInfo.json Release
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 94%] Built target pluginPresentaBALL_autogen
make  -f source/EXTENSIONS/PRESENTABALL/CMakeFiles/pluginPresentaBALL.dir/build.make source/EXTENSIONS/PRESENTABALL/CMakeFiles/pluginPresentaBALL.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 94%] Generating ui_PresentaBALLSettings.h
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/EXTENSIONS/PRESENTABALL && /usr/lib/qt5/bin/uic -o /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/EXTENSIONS/PRESENTABALL/ui_PresentaBALLSettings.h /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/EXTENSIONS/PRESENTABALL/source/PresentaBALLSettings.ui
[ 94%] Generating include/moc_PresentaBALLPlugin.cpp
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/EXTENSIONS/PRESENTABALL/include && /usr/lib/qt5/bin/moc @/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/EXTENSIONS/PRESENTABALL/include/moc_PresentaBALLPlugin.cpp_parameters
[ 94%] Generating include/moc_PresentaBALLSettings.cpp
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/EXTENSIONS/PRESENTABALL/include && /usr/lib/qt5/bin/moc @/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/EXTENSIONS/PRESENTABALL/include/moc_PresentaBALLSettings.cpp_parameters
[ 94%] Generating include/moc_PresentaBALLView.cpp
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/EXTENSIONS/PRESENTABALL/include && /usr/lib/qt5/bin/moc @/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/EXTENSIONS/PRESENTABALL/include/moc_PresentaBALLView.cpp_parameters
[ 94%] Generating qrc_logo.cpp
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/EXTENSIONS/PRESENTABALL && /usr/lib/qt5/bin/rcc --name logo --output /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/EXTENSIONS/PRESENTABALL/qrc_logo.cpp /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/EXTENSIONS/PRESENTABALL/source/logo.qrc
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/EXTENSIONS/PRESENTABALL /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/EXTENSIONS/PRESENTABALL /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/EXTENSIONS/PRESENTABALL/CMakeFiles/pluginPresentaBALL.dir/DependInfo.cmake --color=
Scanning dependencies of target pluginPresentaBALL
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/EXTENSIONS/PRESENTABALL/CMakeFiles/pluginPresentaBALL.dir/build.make source/EXTENSIONS/PRESENTABALL/CMakeFiles/pluginPresentaBALL.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 94%] Building CXX object source/EXTENSIONS/PRESENTABALL/CMakeFiles/pluginPresentaBALL.dir/pluginPresentaBALL_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/EXTENSIONS/PRESENTABALL && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SHARED -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DpluginPresentaBALL_EXPORTS -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/EXTENSIONS/PRESENTABALL/pluginPresentaBALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/EXTENSIONS/PRESENTABALL/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/EXTENSIONS/PRESENTABALL -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/pluginPresentaBALL.dir/pluginPresentaBALL_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/EXTENSIONS/PRESENTABALL/pluginPresentaBALL_autogen/mocs_compilation.cpp
[ 94%] Building CXX object source/EXTENSIONS/PRESENTABALL/CMakeFiles/pluginPresentaBALL.dir/source/PresentaBALLPlugin.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/EXTENSIONS/PRESENTABALL && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SHARED -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DpluginPresentaBALL_EXPORTS -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/EXTENSIONS/PRESENTABALL/pluginPresentaBALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/EXTENSIONS/PRESENTABALL/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/EXTENSIONS/PRESENTABALL -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/pluginPresentaBALL.dir/source/PresentaBALLPlugin.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/EXTENSIONS/PRESENTABALL/source/PresentaBALLPlugin.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:49,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/EXTENSIONS/PRESENTABALL/source/PresentaBALLPlugin.C:3:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/representation.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/representationManager.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/EXTENSIONS/PRESENTABALL/source/PresentaBALLPlugin.C:3:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:49,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/EXTENSIONS/PRESENTABALL/source/PresentaBALLPlugin.C:3:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/representation.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/representationManager.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/EXTENSIONS/PRESENTABALL/source/PresentaBALLPlugin.C:3:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:49,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/EXTENSIONS/PRESENTABALL/source/PresentaBALLPlugin.C:3:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/representation.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/representationManager.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/EXTENSIONS/PRESENTABALL/source/PresentaBALLPlugin.C:3:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 94%] Building CXX object source/EXTENSIONS/PRESENTABALL/CMakeFiles/pluginPresentaBALL.dir/source/PresentaBALLSettings.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/EXTENSIONS/PRESENTABALL && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SHARED -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DpluginPresentaBALL_EXPORTS -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/EXTENSIONS/PRESENTABALL/pluginPresentaBALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/EXTENSIONS/PRESENTABALL/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/EXTENSIONS/PRESENTABALL -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/pluginPresentaBALL.dir/source/PresentaBALLSettings.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/EXTENSIONS/PRESENTABALL/source/PresentaBALLSettings.C
[ 94%] Building CXX object source/EXTENSIONS/PRESENTABALL/CMakeFiles/pluginPresentaBALL.dir/source/PresentaBALLView.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/EXTENSIONS/PRESENTABALL && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SHARED -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DpluginPresentaBALL_EXPORTS -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/EXTENSIONS/PRESENTABALL/pluginPresentaBALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/EXTENSIONS/PRESENTABALL/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/EXTENSIONS/PRESENTABALL -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/pluginPresentaBALL.dir/source/PresentaBALLView.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/EXTENSIONS/PRESENTABALL/source/PresentaBALLView.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:49,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/EXTENSIONS/PRESENTABALL/source/PresentaBALLView.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/common.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/EXTENSIONS/PRESENTABALL/source/PresentaBALLView.C:4:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:49,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/EXTENSIONS/PRESENTABALL/source/PresentaBALLView.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/common.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/EXTENSIONS/PRESENTABALL/source/PresentaBALLView.C:4:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:49,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/EXTENSIONS/PRESENTABALL/source/PresentaBALLView.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/common.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/EXTENSIONS/PRESENTABALL/source/PresentaBALLView.C:4:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/EXTENSIONS/PRESENTABALL/source/PresentaBALLView.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/message.h: In member function 'void BALL::VIEW::SceneMessage::setStage(BALL::VIEW::Stage)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/message.h:409:15: warning: implicitly-declared 'BALL::VIEW::Stage& BALL::VIEW::Stage::operator=(const BALL::VIEW::Stage&)' is deprecated [-Wdeprecated-copy]
  409 |    { stage_ = stage;}
      |               ^~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/message.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/EXTENSIONS/PRESENTABALL/source/PresentaBALLView.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/stage.h:301:4: note: because 'BALL::VIEW::Stage' has user-provided 'BALL::VIEW::Stage::Stage(const BALL::VIEW::Stage&)'
  301 |    Stage(const Stage& stage);
      |    ^~~~~
[ 94%] Building CXX object source/EXTENSIONS/PRESENTABALL/CMakeFiles/pluginPresentaBALL.dir/include/moc_PresentaBALLPlugin.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/EXTENSIONS/PRESENTABALL && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SHARED -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DpluginPresentaBALL_EXPORTS -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/EXTENSIONS/PRESENTABALL/pluginPresentaBALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/EXTENSIONS/PRESENTABALL/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/EXTENSIONS/PRESENTABALL -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/pluginPresentaBALL.dir/include/moc_PresentaBALLPlugin.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/EXTENSIONS/PRESENTABALL/include/moc_PresentaBALLPlugin.cpp
[ 94%] Building CXX object source/EXTENSIONS/PRESENTABALL/CMakeFiles/pluginPresentaBALL.dir/include/moc_PresentaBALLSettings.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/EXTENSIONS/PRESENTABALL && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SHARED -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DpluginPresentaBALL_EXPORTS -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/EXTENSIONS/PRESENTABALL/pluginPresentaBALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/EXTENSIONS/PRESENTABALL/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/EXTENSIONS/PRESENTABALL -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/pluginPresentaBALL.dir/include/moc_PresentaBALLSettings.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/EXTENSIONS/PRESENTABALL/include/moc_PresentaBALLSettings.cpp
[ 94%] Building CXX object source/EXTENSIONS/PRESENTABALL/CMakeFiles/pluginPresentaBALL.dir/include/moc_PresentaBALLView.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/EXTENSIONS/PRESENTABALL && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SHARED -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DpluginPresentaBALL_EXPORTS -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/EXTENSIONS/PRESENTABALL/pluginPresentaBALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/EXTENSIONS/PRESENTABALL/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/EXTENSIONS/PRESENTABALL -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/pluginPresentaBALL.dir/include/moc_PresentaBALLView.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/EXTENSIONS/PRESENTABALL/include/moc_PresentaBALLView.cpp
[ 94%] Building CXX object source/EXTENSIONS/PRESENTABALL/CMakeFiles/pluginPresentaBALL.dir/qrc_logo.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/EXTENSIONS/PRESENTABALL && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SHARED -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DpluginPresentaBALL_EXPORTS -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/EXTENSIONS/PRESENTABALL/pluginPresentaBALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/EXTENSIONS/PRESENTABALL/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/EXTENSIONS/PRESENTABALL -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/pluginPresentaBALL.dir/qrc_logo.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/EXTENSIONS/PRESENTABALL/qrc_logo.cpp
[ 94%] Linking CXX shared library ../../../lib/pluginPresentaBALL.so
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/EXTENSIONS/PRESENTABALL && /usr/bin/cmake -E cmake_link_script CMakeFiles/pluginPresentaBALL.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,pluginPresentaBALL.so -o ../../../lib/pluginPresentaBALL.so CMakeFiles/pluginPresentaBALL.dir/pluginPresentaBALL_autogen/mocs_compilation.cpp.o CMakeFiles/pluginPresentaBALL.dir/source/PresentaBALLPlugin.C.o CMakeFiles/pluginPresentaBALL.dir/source/PresentaBALLSettings.C.o CMakeFiles/pluginPresentaBALL.dir/source/PresentaBALLView.C.o CMakeFiles/pluginPresentaBALL.dir/include/moc_PresentaBALLPlugin.cpp.o CMakeFiles/pluginPresentaBALL.dir/include/moc_PresentaBALLSettings.cpp.o CMakeFiles/pluginPresentaBALL.dir/include/moc_PresentaBALLView.cpp.o CMakeFiles/pluginPresentaBALL.dir/qrc_logo.cpp.o  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib: ../../../lib/libVIEW.so.1.5 /usr/lib/i386-linux-gnu/libQt5WebEngineWidgets.so.5.15.2 ../../../lib/libBALL.so.1.5 /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 -lpython3.9 -lpthread /usr/lib/i386-linux-gnu/libQt5WebEngineCore.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Positioning.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Quick.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5QmlModels.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5WebChannel.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Qml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5OpenGL.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5PrintSupport.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Test.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Widgets.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Gui.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lGL -lGLU 
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 94%] Built target pluginPresentaBALL
make  -f source/EXTENSIONS/BALLAXY/CMakeFiles/pluginBALLaxy_autogen.dir/build.make source/EXTENSIONS/BALLAXY/CMakeFiles/pluginBALLaxy_autogen.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/EXTENSIONS/BALLAXY /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/EXTENSIONS/BALLAXY /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/EXTENSIONS/BALLAXY/CMakeFiles/pluginBALLaxy_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target pluginBALLaxy_autogen
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/EXTENSIONS/BALLAXY/CMakeFiles/pluginBALLaxy_autogen.dir/build.make source/EXTENSIONS/BALLAXY/CMakeFiles/pluginBALLaxy_autogen.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 94%] Automatic MOC for target pluginBALLaxy
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/EXTENSIONS/BALLAXY && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/EXTENSIONS/BALLAXY/CMakeFiles/pluginBALLaxy_autogen.dir/AutogenInfo.json Release
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 94%] Built target pluginBALLaxy_autogen
make  -f source/EXTENSIONS/BALLAXY/CMakeFiles/pluginBALLaxy.dir/build.make source/EXTENSIONS/BALLAXY/CMakeFiles/pluginBALLaxy.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 94%] Generating ui_BALLaxyInterfacePreferences.h
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/EXTENSIONS/BALLAXY && /usr/lib/qt5/bin/uic -o /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/EXTENSIONS/BALLAXY/ui_BALLaxyInterfacePreferences.h /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/EXTENSIONS/BALLAXY/source/BALLaxyInterfacePreferences.ui
[ 94%] Generating include/moc_BALLaxyPlugin.cpp
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/EXTENSIONS/BALLAXY/include && /usr/lib/qt5/bin/moc @/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/EXTENSIONS/BALLAXY/include/moc_BALLaxyPlugin.cpp_parameters
[ 94%] Generating include/moc_BALLaxyInterface.cpp
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/EXTENSIONS/BALLAXY/include && /usr/lib/qt5/bin/moc @/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/EXTENSIONS/BALLAXY/include/moc_BALLaxyInterface.cpp_parameters
[ 94%] Generating include/moc_BALLaxyInterfacePreferences.cpp
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/EXTENSIONS/BALLAXY/include && /usr/lib/qt5/bin/moc @/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/EXTENSIONS/BALLAXY/include/moc_BALLaxyInterfacePreferences.cpp_parameters
[ 94%] Generating qrc_logo.cpp
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/EXTENSIONS/BALLAXY && /usr/lib/qt5/bin/rcc --name logo --output /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/EXTENSIONS/BALLAXY/qrc_logo.cpp /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/EXTENSIONS/BALLAXY/source/logo.qrc
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/EXTENSIONS/BALLAXY /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/EXTENSIONS/BALLAXY /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/EXTENSIONS/BALLAXY/CMakeFiles/pluginBALLaxy.dir/DependInfo.cmake --color=
Scanning dependencies of target pluginBALLaxy
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/EXTENSIONS/BALLAXY/CMakeFiles/pluginBALLaxy.dir/build.make source/EXTENSIONS/BALLAXY/CMakeFiles/pluginBALLaxy.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 94%] Building CXX object source/EXTENSIONS/BALLAXY/CMakeFiles/pluginBALLaxy.dir/pluginBALLaxy_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/EXTENSIONS/BALLAXY && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SHARED -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DpluginBALLaxy_EXPORTS -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/EXTENSIONS/BALLAXY/pluginBALLaxy_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/EXTENSIONS/BALLAXY/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/EXTENSIONS/BALLAXY -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/pluginBALLaxy.dir/pluginBALLaxy_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/EXTENSIONS/BALLAXY/pluginBALLaxy_autogen/mocs_compilation.cpp
[ 94%] Building CXX object source/EXTENSIONS/BALLAXY/CMakeFiles/pluginBALLaxy.dir/source/BALLaxyPlugin.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/EXTENSIONS/BALLAXY && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SHARED -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DpluginBALLaxy_EXPORTS -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/EXTENSIONS/BALLAXY/pluginBALLaxy_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/EXTENSIONS/BALLAXY/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/EXTENSIONS/BALLAXY -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/pluginBALLaxy.dir/source/BALLaxyPlugin.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/EXTENSIONS/BALLAXY/source/BALLaxyPlugin.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:49,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/EXTENSIONS/BALLAXY/source/BALLaxyPlugin.C:3:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/representation.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/representationManager.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/EXTENSIONS/BALLAXY/source/BALLaxyPlugin.C:3:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:49,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/EXTENSIONS/BALLAXY/source/BALLaxyPlugin.C:3:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/representation.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/representationManager.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/EXTENSIONS/BALLAXY/source/BALLaxyPlugin.C:3:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:49,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/EXTENSIONS/BALLAXY/source/BALLaxyPlugin.C:3:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/representation.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/representationManager.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/mainControl.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/EXTENSIONS/BALLAXY/source/BALLaxyPlugin.C:3:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 94%] Building CXX object source/EXTENSIONS/BALLAXY/CMakeFiles/pluginBALLaxy.dir/source/BALLaxyInterface.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/EXTENSIONS/BALLAXY && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SHARED -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DpluginBALLaxy_EXPORTS -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/EXTENSIONS/BALLAXY/pluginBALLaxy_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/EXTENSIONS/BALLAXY/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/EXTENSIONS/BALLAXY -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/pluginBALLaxy.dir/source/BALLaxyInterface.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/EXTENSIONS/BALLAXY/source/BALLaxyInterface.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/EXTENSIONS/BALLAXY/source/BALLaxyInterface.C:3:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/EXTENSIONS/BALLAXY/source/BALLaxyInterface.C:3:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/EXTENSIONS/BALLAXY/source/BALLaxyInterface.C:3:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/EXTENSIONS/BALLAXY/source/BALLaxyInterface.C:3:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/EXTENSIONS/BALLAXY/source/BALLaxyInterface.C:3:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/EXTENSIONS/BALLAXY/source/BALLaxyInterface.C:3:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/EXTENSIONS/BALLAXY/source/BALLaxyInterface.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/message.h: In member function 'void BALL::VIEW::SceneMessage::setStage(BALL::VIEW::Stage)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/message.h:409:15: warning: implicitly-declared 'BALL::VIEW::Stage& BALL::VIEW::Stage::operator=(const BALL::VIEW::Stage&)' is deprecated [-Wdeprecated-copy]
  409 |    { stage_ = stage;}
      |               ^~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/message.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/EXTENSIONS/BALLAXY/source/BALLaxyInterface.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/stage.h:301:4: note: because 'BALL::VIEW::Stage' has user-provided 'BALL::VIEW::Stage::Stage(const BALL::VIEW::Stage&)'
  301 |    Stage(const Stage& stage);
      |    ^~~~~
[ 94%] Building CXX object source/EXTENSIONS/BALLAXY/CMakeFiles/pluginBALLaxy.dir/source/BALLaxyInterfacePreferences.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/EXTENSIONS/BALLAXY && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SHARED -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DpluginBALLaxy_EXPORTS -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/EXTENSIONS/BALLAXY/pluginBALLaxy_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/EXTENSIONS/BALLAXY/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/EXTENSIONS/BALLAXY -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/pluginBALLaxy.dir/source/BALLaxyInterfacePreferences.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/EXTENSIONS/BALLAXY/source/BALLaxyInterfacePreferences.C
[ 94%] Building CXX object source/EXTENSIONS/BALLAXY/CMakeFiles/pluginBALLaxy.dir/include/moc_BALLaxyPlugin.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/EXTENSIONS/BALLAXY && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SHARED -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DpluginBALLaxy_EXPORTS -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/EXTENSIONS/BALLAXY/pluginBALLaxy_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/EXTENSIONS/BALLAXY/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/EXTENSIONS/BALLAXY -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/pluginBALLaxy.dir/include/moc_BALLaxyPlugin.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/EXTENSIONS/BALLAXY/include/moc_BALLaxyPlugin.cpp
[ 96%] Building CXX object source/EXTENSIONS/BALLAXY/CMakeFiles/pluginBALLaxy.dir/include/moc_BALLaxyInterface.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/EXTENSIONS/BALLAXY && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SHARED -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DpluginBALLaxy_EXPORTS -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/EXTENSIONS/BALLAXY/pluginBALLaxy_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/EXTENSIONS/BALLAXY/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/EXTENSIONS/BALLAXY -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/pluginBALLaxy.dir/include/moc_BALLaxyInterface.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/EXTENSIONS/BALLAXY/include/moc_BALLaxyInterface.cpp
[ 96%] Building CXX object source/EXTENSIONS/BALLAXY/CMakeFiles/pluginBALLaxy.dir/include/moc_BALLaxyInterfacePreferences.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/EXTENSIONS/BALLAXY && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SHARED -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DpluginBALLaxy_EXPORTS -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/EXTENSIONS/BALLAXY/pluginBALLaxy_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/EXTENSIONS/BALLAXY/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/EXTENSIONS/BALLAXY -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/pluginBALLaxy.dir/include/moc_BALLaxyInterfacePreferences.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/EXTENSIONS/BALLAXY/include/moc_BALLaxyInterfacePreferences.cpp
[ 96%] Building CXX object source/EXTENSIONS/BALLAXY/CMakeFiles/pluginBALLaxy.dir/qrc_logo.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/EXTENSIONS/BALLAXY && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_SHARED -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DpluginBALLaxy_EXPORTS -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/EXTENSIONS/BALLAXY/pluginBALLaxy_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/EXTENSIONS/BALLAXY/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/EXTENSIONS/BALLAXY -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/i386-linux-gnu/qt5/QtTest -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtWebEngineCore -isystem /usr/include/i386-linux-gnu/qt5/QtQuick -isystem /usr/include/i386-linux-gnu/qt5/QtQmlModels -isystem /usr/include/i386-linux-gnu/qt5/QtQml -isystem /usr/include/i386-linux-gnu/qt5/QtWebChannel -isystem /usr/include/i386-linux-gnu/qt5/QtPositioning -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/pluginBALLaxy.dir/qrc_logo.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/EXTENSIONS/BALLAXY/qrc_logo.cpp
[ 96%] Linking CXX shared library ../../../lib/pluginBALLaxy.so
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/EXTENSIONS/BALLAXY && /usr/bin/cmake -E cmake_link_script CMakeFiles/pluginBALLaxy.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,pluginBALLaxy.so -o ../../../lib/pluginBALLaxy.so CMakeFiles/pluginBALLaxy.dir/pluginBALLaxy_autogen/mocs_compilation.cpp.o CMakeFiles/pluginBALLaxy.dir/source/BALLaxyPlugin.C.o CMakeFiles/pluginBALLaxy.dir/source/BALLaxyInterface.C.o CMakeFiles/pluginBALLaxy.dir/source/BALLaxyInterfacePreferences.C.o CMakeFiles/pluginBALLaxy.dir/include/moc_BALLaxyPlugin.cpp.o CMakeFiles/pluginBALLaxy.dir/include/moc_BALLaxyInterface.cpp.o CMakeFiles/pluginBALLaxy.dir/include/moc_BALLaxyInterfacePreferences.cpp.o CMakeFiles/pluginBALLaxy.dir/qrc_logo.cpp.o  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib: ../../../lib/libVIEW.so.1.5 ../../../lib/libBALL.so.1.5 /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 -lpython3.9 -lpthread /usr/lib/i386-linux-gnu/libQt5OpenGL.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Test.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5WebEngineWidgets.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5PrintSupport.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Widgets.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5WebEngineCore.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Positioning.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Quick.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Gui.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5QmlModels.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5WebChannel.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Qml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lGL -lGLU 
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 96%] Built target pluginBALLaxy
make  -f source/APPLICATIONS/BALLVIEW/CMakeFiles/BALLView_autogen.dir/build.make source/APPLICATIONS/BALLVIEW/CMakeFiles/BALLView_autogen.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/BALLVIEW /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/BALLVIEW /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/BALLVIEW/CMakeFiles/BALLView_autogen.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/BALLVIEW/CMakeFiles/BALLView_autogen.dir/build.make source/APPLICATIONS/BALLVIEW/CMakeFiles/BALLView_autogen.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 96%] Automatic MOC for target BALLView
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/BALLVIEW && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/BALLVIEW/CMakeFiles/BALLView_autogen.dir/AutogenInfo.json Release
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 96%] Built target BALLView_autogen
make  -f source/APPLICATIONS/BALLVIEW/CMakeFiles/BALLView.dir/build.make source/APPLICATIONS/BALLVIEW/CMakeFiles/BALLView.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/BALLVIEW /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/BALLVIEW /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/BALLVIEW/CMakeFiles/BALLView.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/BALLVIEW/CMakeFiles/BALLView.dir/build.make source/APPLICATIONS/BALLVIEW/CMakeFiles/BALLView.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make[4]: Nothing to be done for 'source/APPLICATIONS/BALLVIEW/CMakeFiles/BALLView.dir/build'.
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 96%] Built target BALLView
make  -f source/APPLICATIONS/MMFF94/CMakeFiles/testKekulizer_autogen.dir/build.make source/APPLICATIONS/MMFF94/CMakeFiles/testKekulizer_autogen.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/MMFF94 /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/MMFF94 /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/MMFF94/CMakeFiles/testKekulizer_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target testKekulizer_autogen
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/MMFF94/CMakeFiles/testKekulizer_autogen.dir/build.make source/APPLICATIONS/MMFF94/CMakeFiles/testKekulizer_autogen.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 96%] Automatic MOC for target testKekulizer
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/MMFF94 && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/MMFF94/CMakeFiles/testKekulizer_autogen.dir/AutogenInfo.json Release
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 96%] Built target testKekulizer_autogen
make  -f source/APPLICATIONS/MMFF94/CMakeFiles/testKekulizer.dir/build.make source/APPLICATIONS/MMFF94/CMakeFiles/testKekulizer.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/MMFF94 /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/MMFF94 /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/MMFF94/CMakeFiles/testKekulizer.dir/DependInfo.cmake --color=
Scanning dependencies of target testKekulizer
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/MMFF94/CMakeFiles/testKekulizer.dir/build.make source/APPLICATIONS/MMFF94/CMakeFiles/testKekulizer.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 96%] Building CXX object source/APPLICATIONS/MMFF94/CMakeFiles/testKekulizer.dir/testKekulizer_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/MMFF94 && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/MMFF94/testKekulizer_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/testKekulizer.dir/testKekulizer_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/MMFF94/testKekulizer_autogen/mocs_compilation.cpp
[ 96%] Building CXX object source/APPLICATIONS/MMFF94/CMakeFiles/testKekulizer.dir/testKekulizer.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/MMFF94 && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/MMFF94/testKekulizer_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/testKekulizer.dir/testKekulizer.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/MMFF94/testKekulizer.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/MMFF94/testKekulizer.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/MMFF94/testKekulizer.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/MMFF94/testKekulizer.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/MMFF94/testKekulizer.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/MMFF94/testKekulizer.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/MMFF94/testKekulizer.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/MMFF94/testKekulizer.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94ParametersBase::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:43:3: note: in expansion of macro 'BALL_CREATE'
   43 |   BALL_CREATE(MMFF94ParametersBase)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/MMFF94/testKekulizer.C:20:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/MMFF94/testKekulizer.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:3: note: in expansion of macro 'BALL_CREATE'
  217 |   BALL_CREATE(MMFF94StretchParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/MMFF94/testKekulizer.C:20:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:226:34: note: because 'BALL::MMFF94StretchParameters' has user-provided 'const BALL::MMFF94StretchParameters& BALL::MMFF94StretchParameters::operator=(const BALL::MMFF94StretchParameters&)'
  226 |   const MMFF94StretchParameters& operator = (const MMFF94StretchParameters& param)
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:185:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  185 |  class BALL_EXPORT MMFF94StretchParameters:
      |                    ^~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/MMFF94/testKekulizer.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:3: note: in expansion of macro 'BALL_CREATE'
  217 |   BALL_CREATE(MMFF94StretchParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94BendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:3: note: in expansion of macro 'BALL_CREATE'
  271 |   BALL_CREATE(MMFF94BendParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/MMFF94/testKekulizer.C:20:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:280:31: note: because 'BALL::MMFF94BendParameters' has user-provided 'const BALL::MMFF94BendParameters& BALL::MMFF94BendParameters::operator=(const BALL::MMFF94BendParameters&)'
  280 |   const MMFF94BendParameters& operator = (const MMFF94BendParameters& param)
      |                               ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:263:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  263 |  class BALL_EXPORT MMFF94BendParameters
      |                    ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/MMFF94/testKekulizer.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94BendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:3: note: in expansion of macro 'BALL_CREATE'
  271 |   BALL_CREATE(MMFF94BendParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:3: note: in expansion of macro 'BALL_CREATE'
  318 |   BALL_CREATE(MMFF94StretchBendParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/MMFF94/testKekulizer.C:20:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:327:38: note: because 'BALL::MMFF94StretchBendParameters' has user-provided 'const BALL::MMFF94StretchBendParameters& BALL::MMFF94StretchBendParameters::operator=(const BALL::MMFF94StretchBendParameters&)'
  327 |   const MMFF94StretchBendParameters& operator = (const MMFF94StretchBendParameters& param)
      |                                      ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:310:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  310 |  class BALL_EXPORT MMFF94StretchBendParameters
      |                    ^~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/MMFF94/testKekulizer.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:3: note: in expansion of macro 'BALL_CREATE'
  318 |   BALL_CREATE(MMFF94StretchBendParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:3: note: in expansion of macro 'BALL_CREATE'
  374 |   BALL_CREATE(MMFF94TorsionParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/MMFF94/testKekulizer.C:20:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:383:34: note: because 'BALL::MMFF94TorsionParameters' has user-provided 'const BALL::MMFF94TorsionParameters& BALL::MMFF94TorsionParameters::operator=(const BALL::MMFF94TorsionParameters&)'
  383 |   const MMFF94TorsionParameters& operator = (const MMFF94TorsionParameters& param)
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:366:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  366 |  class BALL_EXPORT MMFF94TorsionParameters
      |                    ^~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/MMFF94/testKekulizer.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:3: note: in expansion of macro 'BALL_CREATE'
  374 |   BALL_CREATE(MMFF94TorsionParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:3: note: in expansion of macro 'BALL_CREATE'
  422 |   BALL_CREATE(MMFF94PlaneParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/MMFF94/testKekulizer.C:20:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:431:32: note: because 'BALL::MMFF94PlaneParameters' has user-provided 'const BALL::MMFF94PlaneParameters& BALL::MMFF94PlaneParameters::operator=(const BALL::MMFF94PlaneParameters&)'
  431 |   const MMFF94PlaneParameters& operator = (const MMFF94PlaneParameters& param)
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:414:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  414 |  class BALL_EXPORT MMFF94PlaneParameters
      |                    ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/MMFF94/testKekulizer.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:3: note: in expansion of macro 'BALL_CREATE'
  422 |   BALL_CREATE(MMFF94PlaneParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:3: note: in expansion of macro 'BALL_CREATE'
  473 |   BALL_CREATE(MMFF94VDWParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/MMFF94/testKekulizer.C:20:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:482:30: note: because 'BALL::MMFF94VDWParameters' has user-provided 'const BALL::MMFF94VDWParameters& BALL::MMFF94VDWParameters::operator=(const BALL::MMFF94VDWParameters&)'
  482 |   const MMFF94VDWParameters& operator = (const MMFF94VDWParameters& param)
      |                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:458:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  458 |  class BALL_EXPORT MMFF94VDWParameters
      |                    ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/MMFF94/testKekulizer.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:3: note: in expansion of macro 'BALL_CREATE'
  473 |   BALL_CREATE(MMFF94VDWParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94ESParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:3: note: in expansion of macro 'BALL_CREATE'
  530 |   BALL_CREATE(MMFF94ESParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/MMFF94/testKekulizer.C:20:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:539:29: note: because 'BALL::MMFF94ESParameters' has user-provided 'const BALL::MMFF94ESParameters& BALL::MMFF94ESParameters::operator=(const BALL::MMFF94ESParameters&)'
  539 |   const MMFF94ESParameters& operator = (const MMFF94ESParameters& param)
      |                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:525:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  525 |  class BALL_EXPORT MMFF94ESParameters
      |                    ^~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/MMFF94/testKekulizer.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94ESParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:3: note: in expansion of macro 'BALL_CREATE'
  530 |   BALL_CREATE(MMFF94ESParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/MMFF94/testKekulizer.C:18:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/MMFF94/testKekulizer.C: In function 'BALL::System* readTestFile(BALL::String)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:64:49: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   64 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/MMFF94/testKekulizer.C:74:2: note: in expansion of macro 'BALL_FOREACH_ATOM'
   74 |  BALL_FOREACH_ATOM(*system, ait)
      |  ^~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/MMFF94/testKekulizer.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/MMFF94/testKekulizer.C:18:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/MMFF94/testKekulizer.C: In function 'BALL::System* readTestFile(BALL::String)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:64:49: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' first required here
   64 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/MMFF94/testKekulizer.C:74:2: note: in expansion of macro 'BALL_FOREACH_ATOM'
   74 |  BALL_FOREACH_ATOM(*system, ait)
      |  ^~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/MMFF94/testKekulizer.C:18:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/MMFF94/testKekulizer.C: In function 'int runtests(const std::vector<BALL::String>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:108:49: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  108 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/MMFF94/testKekulizer.C:160:3: note: in expansion of macro 'BALL_FOREACH_BOND'
  160 |   BALL_FOREACH_BOND(*system, ai, abit)
      |   ^~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/MMFF94/testKekulizer.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/MMFF94/testKekulizer.C:18:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:110:51: warning: implicitly-declared 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  110 |   for (bond_iterator = (*atom_iterator).beginBond(); \
      |                                                   ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/MMFF94/testKekulizer.C:160:3: note: in expansion of macro 'BALL_FOREACH_BOND'
  160 |   BALL_FOREACH_BOND(*system, ai, abit)
      |   ^~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/MMFF94/testKekulizer.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:437:15: note: because 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::RandomAccessIterator<Container, DataType, Position, Traits>::RandomAccessIterator(const BALL::RandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
  437 |   BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:413:8: warning: implicitly-declared 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  413 |  class RandomAccessIterator
      |        ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:47:15: note: because 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   47 |   BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:24:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   24 |  class ConstRandomAccessIterator
      |        ^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/MMFF94/testKekulizer.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/MMFF94/testKekulizer.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:413:8: note: synthesized method 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' first required here
  413 |  class RandomAccessIterator
      |        ^~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/MMFF94/testKekulizer.C:18:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/MMFF94/testKekulizer.C: In function 'int runtests(const std::vector<BALL::String>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:110:51: note: synthesized method 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' first required here
  110 |   for (bond_iterator = (*atom_iterator).beginBond(); \
      |                                                   ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/MMFF94/testKekulizer.C:160:3: note: in expansion of macro 'BALL_FOREACH_BOND'
  160 |   BALL_FOREACH_BOND(*system, ai, abit)
      |   ^~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/MMFF94/testKekulizer.C:182:30: warning: implicitly-declared 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  182 |     abit = (**hit).beginBond();
      |                              ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/MMFF94/testKekulizer.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:437:15: note: because 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::RandomAccessIterator<Container, DataType, Position, Traits>::RandomAccessIterator(const BALL::RandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
  437 |   BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/MMFF94/testKekulizer.C:18:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:108:49: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  108 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/MMFF94/testKekulizer.C:207:3: note: in expansion of macro 'BALL_FOREACH_BOND'
  207 |   BALL_FOREACH_BOND(*system, ai, abit)
      |   ^~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/MMFF94/testKekulizer.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/MMFF94/testKekulizer.C:18:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:110:51: warning: implicitly-declared 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  110 |   for (bond_iterator = (*atom_iterator).beginBond(); \
      |                                                   ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/MMFF94/testKekulizer.C:207:3: note: in expansion of macro 'BALL_FOREACH_BOND'
  207 |   BALL_FOREACH_BOND(*system, ai, abit)
      |   ^~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/MMFF94/testKekulizer.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:437:15: note: because 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::RandomAccessIterator<Container, DataType, Position, Traits>::RandomAccessIterator(const BALL::RandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
  437 |   BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~
[ 96%] Linking CXX executable ../../../bin/MMFF94/testKekulizer
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/MMFF94 && /usr/bin/cmake -E cmake_link_script CMakeFiles/testKekulizer.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/testKekulizer.dir/testKekulizer_autogen/mocs_compilation.cpp.o CMakeFiles/testKekulizer.dir/testKekulizer.C.o -o ../../../bin/MMFF94/testKekulizer  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../../../lib/libBALL.so.1.5 /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 96%] Built target testKekulizer
make  -f source/APPLICATIONS/MMFF94/CMakeFiles/splitMMFFTestSuiteOptiFiles_autogen.dir/build.make source/APPLICATIONS/MMFF94/CMakeFiles/splitMMFFTestSuiteOptiFiles_autogen.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/MMFF94 /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/MMFF94 /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/MMFF94/CMakeFiles/splitMMFFTestSuiteOptiFiles_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target splitMMFFTestSuiteOptiFiles_autogen
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/MMFF94/CMakeFiles/splitMMFFTestSuiteOptiFiles_autogen.dir/build.make source/APPLICATIONS/MMFF94/CMakeFiles/splitMMFFTestSuiteOptiFiles_autogen.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 96%] Automatic MOC for target splitMMFFTestSuiteOptiFiles
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/MMFF94 && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/MMFF94/CMakeFiles/splitMMFFTestSuiteOptiFiles_autogen.dir/AutogenInfo.json Release
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 96%] Built target splitMMFFTestSuiteOptiFiles_autogen
make  -f source/APPLICATIONS/MMFF94/CMakeFiles/splitMMFFTestSuiteOptiFiles.dir/build.make source/APPLICATIONS/MMFF94/CMakeFiles/splitMMFFTestSuiteOptiFiles.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/MMFF94 /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/MMFF94 /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/MMFF94/CMakeFiles/splitMMFFTestSuiteOptiFiles.dir/DependInfo.cmake --color=
Scanning dependencies of target splitMMFFTestSuiteOptiFiles
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/MMFF94/CMakeFiles/splitMMFFTestSuiteOptiFiles.dir/build.make source/APPLICATIONS/MMFF94/CMakeFiles/splitMMFFTestSuiteOptiFiles.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 96%] Building CXX object source/APPLICATIONS/MMFF94/CMakeFiles/splitMMFFTestSuiteOptiFiles.dir/splitMMFFTestSuiteOptiFiles_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/MMFF94 && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/MMFF94/splitMMFFTestSuiteOptiFiles_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/splitMMFFTestSuiteOptiFiles.dir/splitMMFFTestSuiteOptiFiles_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/MMFF94/splitMMFFTestSuiteOptiFiles_autogen/mocs_compilation.cpp
[ 96%] Building CXX object source/APPLICATIONS/MMFF94/CMakeFiles/splitMMFFTestSuiteOptiFiles.dir/splitMMFFTestSuiteOptiFiles.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/MMFF94 && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/MMFF94/splitMMFFTestSuiteOptiFiles_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/splitMMFFTestSuiteOptiFiles.dir/splitMMFFTestSuiteOptiFiles.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/MMFF94/splitMMFFTestSuiteOptiFiles.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/MMFF94/splitMMFFTestSuiteOptiFiles.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/MMFF94/splitMMFFTestSuiteOptiFiles.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/MMFF94/splitMMFFTestSuiteOptiFiles.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/MMFF94/splitMMFFTestSuiteOptiFiles.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/MMFF94/splitMMFFTestSuiteOptiFiles.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/MMFF94/splitMMFFTestSuiteOptiFiles.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 96%] Linking CXX executable ../../../bin/MMFF94/splitMMFFTestSuiteOptiFiles
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/MMFF94 && /usr/bin/cmake -E cmake_link_script CMakeFiles/splitMMFFTestSuiteOptiFiles.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/splitMMFFTestSuiteOptiFiles.dir/splitMMFFTestSuiteOptiFiles_autogen/mocs_compilation.cpp.o CMakeFiles/splitMMFFTestSuiteOptiFiles.dir/splitMMFFTestSuiteOptiFiles.C.o -o ../../../bin/MMFF94/splitMMFFTestSuiteOptiFiles  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../../../lib/libBALL.so.1.5 /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 96%] Built target splitMMFFTestSuiteOptiFiles
make  -f source/APPLICATIONS/MMFF94/CMakeFiles/splitMMFFTestSuiteMolFiles_autogen.dir/build.make source/APPLICATIONS/MMFF94/CMakeFiles/splitMMFFTestSuiteMolFiles_autogen.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/MMFF94 /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/MMFF94 /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/MMFF94/CMakeFiles/splitMMFFTestSuiteMolFiles_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target splitMMFFTestSuiteMolFiles_autogen
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/MMFF94/CMakeFiles/splitMMFFTestSuiteMolFiles_autogen.dir/build.make source/APPLICATIONS/MMFF94/CMakeFiles/splitMMFFTestSuiteMolFiles_autogen.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 96%] Automatic MOC for target splitMMFFTestSuiteMolFiles
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/MMFF94 && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/MMFF94/CMakeFiles/splitMMFFTestSuiteMolFiles_autogen.dir/AutogenInfo.json Release
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 96%] Built target splitMMFFTestSuiteMolFiles_autogen
make  -f source/APPLICATIONS/MMFF94/CMakeFiles/splitMMFFTestSuiteMolFiles.dir/build.make source/APPLICATIONS/MMFF94/CMakeFiles/splitMMFFTestSuiteMolFiles.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/MMFF94 /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/MMFF94 /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/MMFF94/CMakeFiles/splitMMFFTestSuiteMolFiles.dir/DependInfo.cmake --color=
Scanning dependencies of target splitMMFFTestSuiteMolFiles
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/MMFF94/CMakeFiles/splitMMFFTestSuiteMolFiles.dir/build.make source/APPLICATIONS/MMFF94/CMakeFiles/splitMMFFTestSuiteMolFiles.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 96%] Building CXX object source/APPLICATIONS/MMFF94/CMakeFiles/splitMMFFTestSuiteMolFiles.dir/splitMMFFTestSuiteMolFiles_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/MMFF94 && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/MMFF94/splitMMFFTestSuiteMolFiles_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/splitMMFFTestSuiteMolFiles.dir/splitMMFFTestSuiteMolFiles_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/MMFF94/splitMMFFTestSuiteMolFiles_autogen/mocs_compilation.cpp
[ 96%] Building CXX object source/APPLICATIONS/MMFF94/CMakeFiles/splitMMFFTestSuiteMolFiles.dir/splitMMFFTestSuiteMolFiles.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/MMFF94 && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/MMFF94/splitMMFFTestSuiteMolFiles_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/splitMMFFTestSuiteMolFiles.dir/splitMMFFTestSuiteMolFiles.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/MMFF94/splitMMFFTestSuiteMolFiles.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/MMFF94/splitMMFFTestSuiteMolFiles.C:12:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/MMFF94/splitMMFFTestSuiteMolFiles.C:12:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/MMFF94/splitMMFFTestSuiteMolFiles.C:12:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/MMFF94/splitMMFFTestSuiteMolFiles.C:12:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/MMFF94/splitMMFFTestSuiteMolFiles.C:12:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/MMFF94/splitMMFFTestSuiteMolFiles.C:12:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
[ 96%] Linking CXX executable ../../../bin/MMFF94/splitMMFFTestSuiteMolFiles
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/MMFF94 && /usr/bin/cmake -E cmake_link_script CMakeFiles/splitMMFFTestSuiteMolFiles.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/splitMMFFTestSuiteMolFiles.dir/splitMMFFTestSuiteMolFiles_autogen/mocs_compilation.cpp.o CMakeFiles/splitMMFFTestSuiteMolFiles.dir/splitMMFFTestSuiteMolFiles.C.o -o ../../../bin/MMFF94/splitMMFFTestSuiteMolFiles  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../../../lib/libBALL.so.1.5 /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 96%] Built target splitMMFFTestSuiteMolFiles
make  -f source/APPLICATIONS/MMFF94/CMakeFiles/readMMFF94TestFile_autogen.dir/build.make source/APPLICATIONS/MMFF94/CMakeFiles/readMMFF94TestFile_autogen.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/MMFF94 /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/MMFF94 /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/MMFF94/CMakeFiles/readMMFF94TestFile_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target readMMFF94TestFile_autogen
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make  -f source/APPLICATIONS/MMFF94/CMakeFiles/readMMFF94TestFile_autogen.dir/build.make source/APPLICATIONS/MMFF94/CMakeFiles/readMMFF94TestFile_autogen.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 98%] Automatic MOC for target readMMFF94TestFile
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/MMFF94 && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/MMFF94/CMakeFiles/readMMFF94TestFile_autogen.dir/AutogenInfo.json Release
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 98%] Built target readMMFF94TestFile_autogen
make  -f source/APPLICATIONS/MMFF94/CMakeFiles/readMMFF94TestFile.dir/build.make source/APPLICATIONS/MMFF94/CMakeFiles/readMMFF94TestFile.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/MMFF94 /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/MMFF94 /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/MMFF94/CMakeFiles/readMMFF94TestFile.dir/DependInfo.cmake --color=
Scanning dependencies of target readMMFF94TestFile
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
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make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 98%] Building CXX object source/APPLICATIONS/MMFF94/CMakeFiles/readMMFF94TestFile.dir/readMMFF94TestFile_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/MMFF94 && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/MMFF94/readMMFF94TestFile_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/readMMFF94TestFile.dir/readMMFF94TestFile_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/MMFF94/readMMFF94TestFile_autogen/mocs_compilation.cpp
[ 98%] Building CXX object source/APPLICATIONS/MMFF94/CMakeFiles/readMMFF94TestFile.dir/readMMFF94TestFile.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/MMFF94 && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/MMFF94/readMMFF94TestFile_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/readMMFF94TestFile.dir/readMMFF94TestFile.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/MMFF94/readMMFF94TestFile.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/MMFF94/readMMFF94TestFile.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/MMFF94/readMMFF94TestFile.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/MMFF94/readMMFF94TestFile.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |   composite_iterator_ = traits.composite_iterator_;
      |                                ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |   composite_iterator_ = bound_->beginComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/MMFF94/readMMFF94TestFile.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/MMFF94/readMMFF94TestFile.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |   composite_iterator_ = --bound_->endComposite();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/MMFF94/readMMFF94TestFile.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/MMFF94/readMMFF94TestFile.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94ParametersBase::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:43:3: note: in expansion of macro 'BALL_CREATE'
   43 |   BALL_CREATE(MMFF94ParametersBase)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/MMFF94/readMMFF94TestFile.C:20:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/MMFF94/readMMFF94TestFile.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:3: note: in expansion of macro 'BALL_CREATE'
  217 |   BALL_CREATE(MMFF94StretchParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/MMFF94/readMMFF94TestFile.C:20:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:226:34: note: because 'BALL::MMFF94StretchParameters' has user-provided 'const BALL::MMFF94StretchParameters& BALL::MMFF94StretchParameters::operator=(const BALL::MMFF94StretchParameters&)'
  226 |   const MMFF94StretchParameters& operator = (const MMFF94StretchParameters& param)
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:185:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  185 |  class BALL_EXPORT MMFF94StretchParameters:
      |                    ^~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/MMFF94/readMMFF94TestFile.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:3: note: in expansion of macro 'BALL_CREATE'
  217 |   BALL_CREATE(MMFF94StretchParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94BendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:3: note: in expansion of macro 'BALL_CREATE'
  271 |   BALL_CREATE(MMFF94BendParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/MMFF94/readMMFF94TestFile.C:20:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:280:31: note: because 'BALL::MMFF94BendParameters' has user-provided 'const BALL::MMFF94BendParameters& BALL::MMFF94BendParameters::operator=(const BALL::MMFF94BendParameters&)'
  280 |   const MMFF94BendParameters& operator = (const MMFF94BendParameters& param)
      |                               ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:263:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  263 |  class BALL_EXPORT MMFF94BendParameters
      |                    ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/MMFF94/readMMFF94TestFile.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94BendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:3: note: in expansion of macro 'BALL_CREATE'
  271 |   BALL_CREATE(MMFF94BendParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:3: note: in expansion of macro 'BALL_CREATE'
  318 |   BALL_CREATE(MMFF94StretchBendParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/MMFF94/readMMFF94TestFile.C:20:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:327:38: note: because 'BALL::MMFF94StretchBendParameters' has user-provided 'const BALL::MMFF94StretchBendParameters& BALL::MMFF94StretchBendParameters::operator=(const BALL::MMFF94StretchBendParameters&)'
  327 |   const MMFF94StretchBendParameters& operator = (const MMFF94StretchBendParameters& param)
      |                                      ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:310:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  310 |  class BALL_EXPORT MMFF94StretchBendParameters
      |                    ^~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/MMFF94/readMMFF94TestFile.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:3: note: in expansion of macro 'BALL_CREATE'
  318 |   BALL_CREATE(MMFF94StretchBendParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:3: note: in expansion of macro 'BALL_CREATE'
  374 |   BALL_CREATE(MMFF94TorsionParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/MMFF94/readMMFF94TestFile.C:20:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:383:34: note: because 'BALL::MMFF94TorsionParameters' has user-provided 'const BALL::MMFF94TorsionParameters& BALL::MMFF94TorsionParameters::operator=(const BALL::MMFF94TorsionParameters&)'
  383 |   const MMFF94TorsionParameters& operator = (const MMFF94TorsionParameters& param)
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:366:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  366 |  class BALL_EXPORT MMFF94TorsionParameters
      |                    ^~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/MMFF94/readMMFF94TestFile.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:3: note: in expansion of macro 'BALL_CREATE'
  374 |   BALL_CREATE(MMFF94TorsionParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:3: note: in expansion of macro 'BALL_CREATE'
  422 |   BALL_CREATE(MMFF94PlaneParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/MMFF94/readMMFF94TestFile.C:20:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:431:32: note: because 'BALL::MMFF94PlaneParameters' has user-provided 'const BALL::MMFF94PlaneParameters& BALL::MMFF94PlaneParameters::operator=(const BALL::MMFF94PlaneParameters&)'
  431 |   const MMFF94PlaneParameters& operator = (const MMFF94PlaneParameters& param)
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:414:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  414 |  class BALL_EXPORT MMFF94PlaneParameters
      |                    ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/MMFF94/readMMFF94TestFile.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:3: note: in expansion of macro 'BALL_CREATE'
  422 |   BALL_CREATE(MMFF94PlaneParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:3: note: in expansion of macro 'BALL_CREATE'
  473 |   BALL_CREATE(MMFF94VDWParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/MMFF94/readMMFF94TestFile.C:20:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:482:30: note: because 'BALL::MMFF94VDWParameters' has user-provided 'const BALL::MMFF94VDWParameters& BALL::MMFF94VDWParameters::operator=(const BALL::MMFF94VDWParameters&)'
  482 |   const MMFF94VDWParameters& operator = (const MMFF94VDWParameters& param)
      |                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:458:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  458 |  class BALL_EXPORT MMFF94VDWParameters
      |                    ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/MMFF94/readMMFF94TestFile.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:3: note: in expansion of macro 'BALL_CREATE'
  473 |   BALL_CREATE(MMFF94VDWParameters)
      |   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94ESParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared 'BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)' is deprecated [-Wdeprecated-copy]
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:3: note: in expansion of macro 'BALL_CREATE'
  530 |   BALL_CREATE(MMFF94ESParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/MMFF94/readMMFF94TestFile.C:20:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:539:29: note: because 'BALL::MMFF94ESParameters' has user-provided 'const BALL::MMFF94ESParameters& BALL::MMFF94ESParameters::operator=(const BALL::MMFF94ESParameters&)'
  539 |   const MMFF94ESParameters& operator = (const MMFF94ESParameters& param)
      |                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:525:20: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  525 |  class BALL_EXPORT MMFF94ESParameters
      |                    ^~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |   const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                               ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/MMFF94/readMMFF94TestFile.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94ESParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:31: note: synthesized method 'BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)' first required here
   73 |    ptr = (void*)new name(*this);\
      |                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:3: note: in expansion of macro 'BALL_CREATE'
  530 |   BALL_CREATE(MMFF94ESParameters)
      |   ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/MMFF94/readMMFF94TestFile.C:18:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/MMFF94/readMMFF94TestFile.C: In function 'BALL::System* readTestFile(BALL::String)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:64:49: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   64 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/MMFF94/readMMFF94TestFile.C:118:2: note: in expansion of macro 'BALL_FOREACH_ATOM'
  118 |  BALL_FOREACH_ATOM(*system, ait)
      |  ^~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/MMFF94/readMMFF94TestFile.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |   BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |  class BidirectionalIterator
      |        ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |   BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/MMFF94/readMMFF94TestFile.C:18:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/MMFF94/readMMFF94TestFile.C: In function 'BALL::System* readTestFile(BALL::String)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:64:49: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' first required here
   64 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/MMFF94/readMMFF94TestFile.C:118:2: note: in expansion of macro 'BALL_FOREACH_ATOM'
  118 |  BALL_FOREACH_ATOM(*system, ait)
      |  ^~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/MMFF94/readMMFF94TestFile.C: In function 'bool testTorsions(BALL::MMFF94&, const BALL::String&, bool, long int&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/MMFF94/readMMFF94TestFile.C:550:8: warning: variable 'swap' set but not used [-Wunused-but-set-variable]
  550 |   bool swap = false;
      |        ^~~~
[ 98%] Linking CXX executable ../../../bin/MMFF94/readMMFF94TestFile
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/MMFF94 && /usr/bin/cmake -E cmake_link_script CMakeFiles/readMMFF94TestFile.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/readMMFF94TestFile.dir/readMMFF94TestFile_autogen/mocs_compilation.cpp.o CMakeFiles/readMMFF94TestFile.dir/readMMFF94TestFile.C.o -o ../../../bin/MMFF94/readMMFF94TestFile  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../../../lib/libBALL.so.1.5 /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 98%] Built target readMMFF94TestFile
make  -f source/APPLICATIONS/MMFF94/CMakeFiles/compareForces_autogen.dir/build.make source/APPLICATIONS/MMFF94/CMakeFiles/compareForces_autogen.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/MMFF94 /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/MMFF94 /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/MMFF94/CMakeFiles/compareForces_autogen.dir/DependInfo.cmake --color=
Scanning dependencies of target compareForces_autogen
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/MMFF94/CMakeFiles/compareForces_autogen.dir/build.make source/APPLICATIONS/MMFF94/CMakeFiles/compareForces_autogen.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[100%] Automatic MOC for target compareForces
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/MMFF94 && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/MMFF94/CMakeFiles/compareForces_autogen.dir/AutogenInfo.json Release
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[100%] Built target compareForces_autogen
make  -f source/APPLICATIONS/MMFF94/CMakeFiles/compareForces.dir/build.make source/APPLICATIONS/MMFF94/CMakeFiles/compareForces.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/MMFF94 /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/MMFF94 /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/MMFF94/CMakeFiles/compareForces.dir/DependInfo.cmake --color=
Scanning dependencies of target compareForces
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/MMFF94/CMakeFiles/compareForces.dir/build.make source/APPLICATIONS/MMFF94/CMakeFiles/compareForces.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[100%] Building CXX object source/APPLICATIONS/MMFF94/CMakeFiles/compareForces.dir/compareForces_autogen/mocs_compilation.cpp.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/MMFF94 && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/MMFF94/compareForces_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/compareForces.dir/compareForces_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/MMFF94/compareForces_autogen/mocs_compilation.cpp
[100%] Building CXX object source/APPLICATIONS/MMFF94/CMakeFiles/compareForces.dir/compareForces.C.o
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/MMFF94 && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/MMFF94/compareForces_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/compareForces.dir/compareForces.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/MMFF94/compareForces.C
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/MMFF94/compareForces.C: In function 'int main(int, char**)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/MMFF94/compareForces.C:32:14: warning: unused parameter 'argc' [-Wunused-parameter]
   32 | int main(int argc, char** argv)
      |          ~~~~^~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/MMFF94/compareForces.C:32:27: warning: unused parameter 'argv' [-Wunused-parameter]
   32 | int main(int argc, char** argv)
      |                    ~~~~~~~^~~~
[100%] Linking CXX executable ../../../bin/MMFF94/compareForces
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/MMFF94 && /usr/bin/cmake -E cmake_link_script CMakeFiles/compareForces.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/compareForces.dir/compareForces_autogen/mocs_compilation.cpp.o CMakeFiles/compareForces.dir/compareForces.C.o -o ../../../bin/MMFF94/compareForces  -Wl,-rpath,/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/lib ../../../lib/libBALL.so.1.5 /usr/lib/i386-linux-gnu/libboost_chrono.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_date_time.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_iostreams.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_regex.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_serialization.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_system.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_thread.so.1.74.0 /usr/lib/i386-linux-gnu/libboost_atomic.so.1.74.0 -lpthread /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.2 -lpython3.9 -lpthread 
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[100%] Built target compareForces
make[3]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
/usr/bin/cmake -E cmake_progress_start /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/CMakeFiles 0
make  -f CMakeFiles/Makefile2 preinstall
make[3]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make[3]: Nothing to be done for 'preinstall'.
make[3]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
Install the project...
/usr/bin/cmake -P cmake_install.cmake
-- Install configuration: "Release"
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/lib/libBALL.so.1.5
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/lib/libBALL.so
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/lib/libVIEW.so.1.5
-- Set runtime path of "/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/lib/libVIEW.so.1.5" to ""
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/lib/libVIEW.so
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/CHARMM
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/CHARMM/EEF1
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/CHARMM/EEF1/param19_eef1.ini
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/CHARMM/charmm2ini
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/CHARMM/CHARMMNames.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/CHARMM/CHARMMTypes.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/CHARMM/param22.ini
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/BALLView
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/BALLView/translations
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/BALLView/translations/BALLView-zh_TW.ts
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/BALLView/translations/BALLView-de_DE.ts
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/BALLView/shortcuts_12.txt
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/BALLView/shortcuts_15.txt
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/BALLView/html
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/BALLView/html/tutorial05.html
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/BALLView/html/tutorial10.html
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/BALLView/html/demo13.html
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/BALLView/html/tutorial03.html
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/BALLView/html/demo01.html
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/BALLView/html/demo03.html
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/BALLView/html/raytracing_tutorial07.html
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/BALLView/html/tutorial02.html
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/BALLView/html/demo16.html
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/BALLView/html/raytracing_tutorial05.html
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/BALLView/html/tutorial01.html
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/BALLView/html/demo06.html
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-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/BALLView/html/raytracing_tutorial06.html
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/BALLView/html/raytracing_tutorial03.html
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/BALLView/html/tutorial08.html
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/BALLView/html/raytracing_tutorial01.html
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/BALLView/html/tutorial06.html
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/BALLView/html/demo14.html
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-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/BALLView/html/raytracing_tutorial02.html
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/BALLView/html/raytracing_tutorial04.html
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/BALLView/html/demo10.html
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-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/equivalent_atoms.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/iupac2pdb.map
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/SHIFTX.ini
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/ignore_atoms.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/nameConversions.map
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/translate.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/pseudoAtoms.map
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/StandardSpectrum.ini
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HD1__obond__chi-1.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/CO__psi-1__chi.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/CA__chi__aa.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HG13__ha1len__ha1len.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HZ2__phi+1__chi2.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/CO__psi+1__psi.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HN__phi__hnbond.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HB2__index__hnbond.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/CA__psi+1__ss.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HZ2__olen__chi.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HD22__index__hnbond.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HG2__obond__hnbond.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HG13__olen__chi.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HZ3__phi+1__aa.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HB__chi2__chi.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HA__chi+1__ss.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/CO__psi-1__ss.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HB2__ss__chi.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HG13__obond__chi-1.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HD21__psi-1__hbondstat.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HE1__ss__ss.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HB3__phi__phi.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HH2__psi+1__psi.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/CA__phi__ssp1.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HD22__olen__aa+1.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HB2__hnlen__index.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HA__phi+1__ha1bond.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HD3__ha1len__hbondstat.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/CB__phi__hnbond.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/N15__hnlen__row.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HA__ha2bond__chi.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HG__psi__ss.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HE__psi__psi.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/CB__olenp1__ssbond.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/CB__aa-1__index.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HE22__chi-1__index.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HB2__aa__aa.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/N15__ss__chi.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HZ3__phi+1__phi+1.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HB3__chi-1__chi-1.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HD2__chi-1__chi-1.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/CO__ssbondp1__hnbond.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HE21__obond__ss.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HG12__ha1bond__chi+1.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HE2__ssbond__ssbond.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HD21__index__index.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HB__psi__psi.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HB2__phi__phi.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/CA__psi-1__chi-1.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HE1__obond__ssbond.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HA__psi__ssbondm1.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HE3__psi+1__aa.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HN__psi__ssm1.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HA__ha2bond__ha1bond.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HG1__ss__ss.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/CA__phi+1__psi.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HE1__obond__obond.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/CA__phi__ha1bond.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HZ__psi-1__phi.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/CB__psi__phi.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HG12__ss__ss.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HA__ha2bond__index.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HZ3__psi-1__psi.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/CB__psi-1__indexp1.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HE3__chi2__chi2.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/CB__ssbond__obondp1.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HN__obond__hnbond.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HD2__hbondstat__chi.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HN__hnlenp1__index.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/CA__psi__phi.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HE22__phi+1__phi+1.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HZ3__obond__ha1bond.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HN__indexm1__chi+1.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HB2__chi-1__chi-1.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HG3__chi+1__chi+1.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HE21__phi-1__ha1bond.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HB2__obond__chi2.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/N15__ha1bond__ss.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HG__hnbond__ha1bond.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HG3__hnbond__chi2.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HZ2__chi__obond.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/N15__psi-1__chi-1.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/CO__aa+1__index.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HB__hnlen__hnlen.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HG__psi+1__psi+1.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HZ2__chi-1__chi.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HB3__obond__chi.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HG1__hnlen__phi.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HE21__psi-1__chi+1.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HE2__chi2__aa.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HD2__chi2__aa.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HG13__obond__obond.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HD21__obond__chi+1.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HN__phi-1__obond.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HG3__phi__index.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HD21__hnbond__chi.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/CO__indexm1__chi-1.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/N15__psi__phi.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HE3__phi__aa.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/CO__ssp1__obond.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HE__ha1bond__ss.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HG1__psi__hnbond.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/CO__ssbondp1__chi+1.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/CA__chi+1__index.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HD3__hbondstat__ha1bond.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HZ__phi__chi+1.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HD2__phi+1__phi+1.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HG1__chi+1__chi2.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/N15__psi-1__psi.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HD1__ss__aa.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HE22__psi+1__obond.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HD22__hnlen__index.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HB3__psi__psi.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HG12__hnbond__hnbond.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HG13__phi__phi.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HZ3__chi-1__chi.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HG13__chi__obond.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HB__hnbond__hnbond.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HG2__chi__chi.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HA__psi__obondm1.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HG2__phi__phi.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HE1__aa__aa.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HA__psi__phi.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HN__ha1bond__chi+1.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HD22__hnbond__hnbond.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/CB__phi__chi.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/N15__ssm1__aa-1.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HN__index__hnbondp1.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/CA__ss__chi.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/N15__phi-1__indexm1.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HD3__chi+1__index.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HA__ssm1__chi-1.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HA__psi+1__ss.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HB__phi-1__chi+1.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/CB__obond__ss.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HD22__aa+1__chi.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HE22__hnbond__hnbond.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HG__chi2__chi.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/N15__row__hnbond.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HN__index__index.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HH2__phi+1__chi2.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HA__phi__aa.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HA__olenm1__psi.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HG13__chi2__index.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/CA__phi+1__phi+1.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HG13__ha1bond__ha1bond.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/CB__indexm1__ssm1.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/CA__ha2bond__aa+1.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HB3__ssbond__ssbond.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HE2__phi-1__obond.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/CB__psi__ss.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HE1__psi__chi+1.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/CB__psi+1__ss.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/CO__psi+1__obond.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HN__psi-1__hnbond.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HE2__chi+1__chi+1.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HB3__aa__aa.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HN__indexp1__row.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HE21__phi-1__ha1len.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/N15__chi__aa.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HB__ssbond__ssbond.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HZ__phi__chi-1.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HG__ha1len__hnbond.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HB__obond__ss.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HN__phi+1__phi.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/CO__psi+1__phi+1.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HE3__chi-1__aa.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HB__chi__aa.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HD22__aa+1__obond.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HE__ha1bond__aa.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/CB__chi__aa.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HG1__phi__hnbond.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HD21__phi+1__phi+1.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HE2__ss__ss.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/N15__indexm1__chi+1.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HB__psi__phi.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HG__phi-1__phi.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/N15__psi-1__obond.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HG3__ha1bond__ss.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/CO__phi__aa.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/WilliamsonAsakura.ini
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/SHIFTX2.ini
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/bond_lengths
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/bond_lengths/bond_lengths.db
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/bond_lengths/bond_lengths_mmff94.ini
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/bond_lengths/BondOrder.xml
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/bond_lengths/BondOrderGAFF.xml
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/python
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/python/view_utils.py
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/python/pyball_kernel
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/python/pyball_kernel/pyball_kernel.py
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/python/pyball_kernel/kernel.json
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/python/pywidget_init.py
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/graphics
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/graphics/icons
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/graphics/icons/scalable
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/graphics/icons/scalable/actions
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/graphics/icons/scalable/actions/object-focus.svg
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/graphics/icons/scalable/actions/molecule-set-element.svg
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/graphics/icons/scalable/actions/download-pubchem.svg
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/graphics/icons/scalable/actions/download-pdb.svg
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/graphics/icons/22x22
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/graphics/icons/22x22/actions
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/graphics/icons/22x22/actions/select-rectangular.png
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/graphics/icons/22x22/actions/list-add.png
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/graphics/icons/22x22/actions/view-restore.png
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/graphics/icons/22x22/actions/download-pubchem.png
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/graphics/icons/22x22/actions/screenshot.png
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/graphics/icons/22x22/actions/mode-edit.png
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/graphics/icons/22x22/actions/continuous-loop.png
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/graphics/icons/22x22/actions/download-pdb.png
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/graphics/icons/22x22/actions/quicksave.png
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/graphics/icons/22x22/actions/document-open.png
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/graphics/icons/22x22/actions/create-bond.png
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/graphics/icons/22x22/actions/process-stop.png
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/graphics/icons/22x22/actions/quickopen-file.png
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/graphics/icons/22x22/actions/molecule-add-hydrogens.png
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/graphics/icons/22x22/actions/molecule-assign-bond-orders.png
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/graphics/icons/22x22/actions/help-hint.png
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/graphics/icons/22x22/actions/edit-delete.png
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/graphics/icons/22x22/actions/edit-copy.png
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/graphics/icons/22x22/actions/view-fullscreen.png
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/graphics/icons/22x22/actions/document-save.png
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/graphics/icons/22x22/actions/molecule-set-element.png
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/graphics/icons/22x22/actions/object-focus.png
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/graphics/icons/22x22/actions/download-electrondensity.png
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/graphics/icons/22x22/actions/transform-rotate.png
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/graphics/icons/22x22/actions/molecule-minimize.png
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/graphics/icons/22x22/actions/transform-move.png
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/graphics/icons/22x22/actions/measure.png
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/graphics/icons/22x22/categories
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/graphics/icons/22x22/categories/preferences.png
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/graphics/icons/22x22/categories/preferences-display.png
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/graphics/icons/16x16
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/graphics/icons/16x16/actions
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/graphics/icons/16x16/actions/select-rectangular.png
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/graphics/icons/16x16/actions/list-add.png
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/graphics/icons/16x16/actions/view-restore.png
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/graphics/icons/16x16/actions/download-pubchem.png
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/graphics/icons/16x16/actions/screenshot.png
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/graphics/icons/16x16/actions/mode-edit.png
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/graphics/icons/16x16/actions/download-pdb.png
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/graphics/icons/16x16/actions/quicksave.png
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/graphics/icons/16x16/actions/document-open.png
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/graphics/icons/16x16/actions/process-stop.png
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/graphics/icons/16x16/actions/quickopen-file.png
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/graphics/icons/16x16/actions/help-hint.png
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/graphics/icons/16x16/actions/edit-delete.png
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/graphics/icons/16x16/actions/edit-copy.png
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/graphics/icons/16x16/actions/view-fullscreen.png
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/graphics/icons/16x16/actions/document-save.png
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/graphics/icons/16x16/actions/molecule-set-element.png
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/graphics/icons/16x16/actions/object-focus.png
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/graphics/icons/16x16/actions/download-electrondensity.png
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/graphics/icons/16x16/actions/transform-rotate.png
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/graphics/icons/16x16/actions/transform-move.png
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/graphics/icons/16x16/actions/measure.png
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/graphics/icons/16x16/categories
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/graphics/icons/16x16/categories/preferences.png
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/graphics/icons/16x16/categories/preferences-display.png
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/graphics/icons/16x16/mimetype
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/graphics/icons/16x16/mimetype/text-x-povray.png
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/graphics/ballview_48x48.xpm
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/graphics/ballview.ico
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/graphics/license.txt
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/graphics/cursor.png
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/graphics/ballview.xpm
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/graphics/logo.png
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/graphics/ballview_32x32.xpm
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/graphics/logo.xpm
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/graphics/ballview_64x64.xpm
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/graphics/nsis_installer_header.bmp
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/graphics/nsis_installer_header.pdf
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/energy
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/energy/ACE_parameters.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/energy/ACE_types.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/QSAR
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/QSAR/atomic_electron_affinities.data
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/QSAR/atomic_polarizabilities.data
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/QSAR/atomic_ionization_potentials.data
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/QSAR/dragon_descriptors.txt
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/solvents
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/solvents/PCM-water.ini
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/solvents/water.hin
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/bondtyping
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/bondtyping/GAFFbondangles.ini
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/bondtyping/atomtypes.xml
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/charges
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/charges/PARSE.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/charges/PARSE.crg
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/charges/amber91.crg
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/charges/amber94.crg
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/charges/charmm.crg
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/PresentaBALL
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/PresentaBALL/scripts
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/PresentaBALL/scripts/toggleanswers.js
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/PresentaBALL/scripts/connectVIEW.js
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/PresentaBALL/html_eng
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/PresentaBALL/html_eng/hiv2.html
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/PresentaBALL/html_eng/cad2.html
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/PresentaBALL/html_eng/aspirin.html
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/PresentaBALL/html_eng/imatinib.html
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/PresentaBALL/html_eng/hiv.html
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/PresentaBALL/html_eng/ehec.html
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/PresentaBALL/html_eng/tutorial
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/PresentaBALL/html_eng/tutorial/tutorial_dialog07.html
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/PresentaBALL/html_eng/tutorial/tutorial_dialog04.html
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/PresentaBALL/html_eng/tutorial/tutorial_dialog10.html
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/PresentaBALL/html_eng/tutorial/tutorial_dialog09.html
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/PresentaBALL/html_eng/tutorial/tutorial_dialog02.html
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/PresentaBALL/html_eng/tutorial/tutorial_dialog08.html
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/PresentaBALL/html_eng/tutorial/tutorial_dialog01.html
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/PresentaBALL/html_eng/tutorial/tutorial_dialog03.html
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/PresentaBALL/html_eng/tutorial/tutorial_dialog05.html
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/PresentaBALL/html_eng/tutorial/tutorial_dialog06.html
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/PresentaBALL/html_eng/aspirin2.html
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/PresentaBALL/html_eng/index.html
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/PresentaBALL/html_eng/cad.html
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/PresentaBALL/html_eng/cancer.html
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/PresentaBALL/html_eng/ehec2.html
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/PresentaBALL/html_eng/cancer2.html
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/PresentaBALL/html_de
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/PresentaBALL/html_de/hiv2.html
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/PresentaBALL/html_de/cad2.html
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/PresentaBALL/html_de/aspirin.html
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/PresentaBALL/html_de/imatinib.html
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/PresentaBALL/html_de/hiv.html
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/PresentaBALL/html_de/ehec.html
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/PresentaBALL/html_de/tutorial
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/PresentaBALL/html_de/tutorial/wiki_tutorial11.html
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/PresentaBALL/html_de/tutorial/wiki_tutorial09.html
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/PresentaBALL/html_de/tutorial/wiki_tutorial04.html
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/PresentaBALL/html_de/tutorial/wiki_tutorial03.html
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/PresentaBALL/html_de/tutorial/wiki_tutorial08.html
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/PresentaBALL/html_de/tutorial/wiki_tutorial02.html
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/PresentaBALL/html_de/tutorial/wiki_tutorial07.html
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/PresentaBALL/html_de/tutorial/wiki_tutorial01.html
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/PresentaBALL/html_de/tutorial/wiki_tutorial05.html
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/PresentaBALL/html_de/tutorial/wiki_tutorial10.html
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/PresentaBALL/html_de/tutorial/wiki_tutorial06.html
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/PresentaBALL/html_de/krebs.html
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/PresentaBALL/html_de/project_template.html
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/PresentaBALL/html_de/laktose.html
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/PresentaBALL/html_de/aspirin2.html
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/PresentaBALL/html_de/index.html
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/PresentaBALL/html_de/darstellung.html
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/PresentaBALL/html_de/cad.html
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/PresentaBALL/html_de/krebs2.html
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/PresentaBALL/html_de/ehec2.html
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/PresentaBALL/html_de/darstellung2.html
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/PresentaBALL/projects
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/PresentaBALL/projects/DNA.bvp
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/PresentaBALL/projects/1mah.bvp
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/PresentaBALL/projects/Sal_ASS.bvp
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/PresentaBALL/projects/imatinib_ligand.bvp
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/PresentaBALL/projects/3eml_cartoon.bvp
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/PresentaBALL/projects/imatinib_complex.bvp
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/PresentaBALL/projects/2ptc.bvp
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/PresentaBALL/projects/lactase_1.bvp
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/PresentaBALL/projects/1FK9_no_mut_2.bvp
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/PresentaBALL/projects/Sal_Salicin.bvp
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/PresentaBALL/projects/1FKO_mut2.bvp
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/PresentaBALL/projects/caffeine_sas.bvp
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/PresentaBALL/projects/2HMI_DNA.bvp
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/PresentaBALL/projects/aligned_HIVprotease.bvp
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/PresentaBALL/projects/caffeine_vdw.bvp
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/PresentaBALL/projects/caffeine_stick.bvp
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/PresentaBALL/projects/imatinib_pocket.bvp
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/PresentaBALL/projects/Sal_Salicyl.bvp
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/PresentaBALL/projects/intimin.bvp
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/PresentaBALL/projects/aspirin.bvp
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/PresentaBALL/projects/caffeine_ballstick.bvp
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/PresentaBALL/projects/NCP_compl.bvp
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/PresentaBALL/projects/1FK9_no_mut_3.bvp
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/PresentaBALL/projects/Sal_X.bvp
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/PresentaBALL/projects/caffeine_line.bvp
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/PresentaBALL/projects/shiga.bvp
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/PresentaBALL/projects/1mah_o_ligand.bvp
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/PresentaBALL/projects/Docetaxel_solo.bvp
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/PresentaBALL/projects/ABLkinase.bvp
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/PresentaBALL/projects/intimin_cartoon.bvp
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/PresentaBALL/projects/Docetaxel.bvp
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/PresentaBALL/images
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/PresentaBALL/images/lactose.png
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/PresentaBALL/images/structure-asparagine.png
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/PresentaBALL/images/structure-efavirenz.png
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/PresentaBALL/images/ballview_repraesentation.jpg
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/PresentaBALL/images/1glu2_scaled.png
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/PresentaBALL/images/logo-jgu.svg
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/PresentaBALL/images/ballview_menueleiste.jpg
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/PresentaBALL/images/structure-salicin.png
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/PresentaBALL/images/cell-division.png
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/PresentaBALL/images/ballview_uebersicht.jpg
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/PresentaBALL/images/cool_scaled.png
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/PresentaBALL/images/logo-eku.svg
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/PresentaBALL/images/Lactose_spaltung.png
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/PresentaBALL/images/drug-development-pipeline.png
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/PresentaBALL/images/ehec.png
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/PresentaBALL/images/structure-docetaxel.png
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/PresentaBALL/images/sas.png
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/PresentaBALL/images/structure-salicylicacid.png
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/PresentaBALL/images/structure-imatinib.png
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/PresentaBALL/images/logo-uds.png
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/PresentaBALL/images/structure-lysine.png
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/PresentaBALL/images/3eml_scaled.png
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/PresentaBALL/images/hiv-lifecycle-scaled.png
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/PresentaBALL/images/structure-acetylsalicylicacid.png
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/PresentaBALL/css
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/PresentaBALL/css/presentaball.css
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/atomtyping
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/atomtyping/AMBERTypes.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/atomtyping/GAFFTypes.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/atomtyping/SYBYLTypes.dat
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/solvation
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/solvation/Claverie-AMBER.ini
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/solvation/bondi.rul
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/solvation/PCM-radii.rul
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/solvation/bondi-vdw.rul
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/solvation/PARSE.rul
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/solvation/PARSE+ions.rul
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/solvation/RDF-AMBER.ini
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/solvation/Ooi.ini
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/solvation/PARSE-ab_initio.rul
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/MMFF94
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/MMFF94/mmff94.ini
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-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/SCORING/COMMON/fermiBaseFunction.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/SCORING/COMMON/rescorer.h
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-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/SCORING/COMMON/scoringOptimizer.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/SCORING/COMMON/scoringFunction.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/SCORING/COMMON/scoreGridSet.h
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-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/SCORING/COMMON/scoringComponent.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/SCORING/COMMON/baseFunction.h
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-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/CONCEPT/selectable.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/CONCEPT/moleculeObjectCreator.h
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-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/CONCEPT/randomAccessIterator.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/CONCEPT/autoDeletable.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/CONCEPT/textPersistenceManager.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/CONCEPT/comparator.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/CONCEPT/client.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/CONCEPT/persistenceManager.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/CONCEPT/preferencesObject.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/CONCEPT/baseIterator.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/CONCEPT/forwardIterator.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/CONCEPT/autoDeletable.iC
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/CONCEPT/enumerator.iC
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/CONCEPT/selectable.iC
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/CONCEPT/persistenceManager.iC
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/CONCEPT/baseFunctor.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/CONCEPT/XDRPersistenceManager.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/CONCEPT/timeStamp.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/CONCEPT/embeddable.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/CONCEPT/visitor.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/CONCEPT/benchmark.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/CONCEPT/enumerator.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/CONCEPT/molecularInformation.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/CONCEPT/factory.h
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-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/CONCEPT/persistentObject.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/CONCEPT/property.iC
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-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/CONCEPT/composite.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/CONCEPT/predicate.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/CONCEPT/bidirectionalIterator.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/CONCEPT/object.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/CONCEPT/timeStamp.iC
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/CONCEPT/objectCreator.h
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-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/NMR/randomCoilShiftProcessor.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/NMR/clearShiftProcessor.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/NMR/haighMallionShiftProcessor.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/NMR/EFShiftProcessor.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/NMR/HBondShiftProcessor.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/NMR/shiftModel1D.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/NMR/createSpectrumProcessor.h
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-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/NMR/shiftModel.h
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-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/NMR/johnsonBoveyShiftProcessor.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/NMR/shiftModule.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/NMR/empiricalHSShiftProcessor.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/NMR/experiment.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/NMR/shiftModel2D.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/NMR/anisotropyShiftProcessor.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/NMR/peakList.h
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-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/MOLMEC
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/MOLMEC/MDSIMULATION
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-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/MOLMEC/MDSIMULATION/molecularDynamics.h
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-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/MOLMEC/CHARMM
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-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/MOLMEC/CHARMM/charmmBend.h
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-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/MOLMEC/MINIMIZATION/energyMinimizer.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/MOLMEC/MINIMIZATION/strangLBFGS.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/MOLMEC/MINIMIZATION/steepestDescent.h
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-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/MOLMEC/PARAMETER/atomTypes.h
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-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/MOLMEC/MMFF94
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-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/MOLMEC/MMFF94/MMFF94Processors.h
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-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/MOLMEC/MMFF94/MMFF94Torsion.h
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-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/MOLMEC/AMBER/GAFFTypeProcessor.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/MOLMEC/AMBER/amber.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/MOLMEC/AMBER/GAFFCESParser.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/MOLMEC/AMBER/amber.doc
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-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/MOLMEC/AMBER/amberNonBonded.h
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-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/SYSTEM/MPISupport.h
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-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/SOLVATION/reissCavFreeEnergyProcessor.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/SOLVATION/pairExpInteractionEnergyProcessor.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/SOLVATION/pairExpRDFIntegrator.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/SOLVATION/ooiEnergy.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/SOLVATION/uhligCavFreeEnergyProcessor.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/SOLVATION/pair6_12InteractionEnergyProcessor.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/SOLVATION/claverieParameter.h
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-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/SOLVATION/pair6_12RDFIntegrator.h
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-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/SOLVATION/electrostaticPotentialCalculator.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/SOLVATION/solventDescriptor.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/SOLVATION/PCMCavFreeEnergyProcessor.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/SOLVATION/poissonBoltzmann.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/SOLVATION/molecularSurfaceGrid.h
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-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/QSAR/kpcrModel.h
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-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/QSAR/configIO.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/QSAR/featureSelection.h
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-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/QSAR/ringPerceptionProcessor.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/QSAR/allModel.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/QSAR/snBModel.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/QSAR/svrModel.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/QSAR/connectivityDescriptors.h
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-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/QSAR/knnModel.h
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-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/QSAR/aromaticityProcessor.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/QSAR/oplsModel.h
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-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/QSAR/surfaceDescriptors.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/QSAR/NMRDescriptors.h
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-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/DATATYPE/hashMap.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/DATATYPE/contour.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/DATATYPE/bitVector.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/DATATYPE/sources.cmake
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/DATATYPE/stringHashMap.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/DATATYPE/regularData3D.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/DATATYPE/stringHashSet.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/DATATYPE/triple.h
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-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/PYTHON/pyInterpreter.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/PYTHON/EXTENSIONS
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/PYTHON/EXTENSIONS/pyUnaryProcessors.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/PYTHON/EXTENSIONS/pyIndexList.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/PYTHON/EXTENSIONS/pyDatasetVector.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/PYTHON/EXTENSIONS/pyConstant.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/PYTHON/EXTENSIONS/pyColorRGBAVector.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/PYTHON/EXTENSIONS/sources.cmake
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/PYTHON/EXTENSIONS/pyListHelper.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/PYTHON/EXTENSIONS/pyCompositeList.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/PYTHON/EXTENSIONS/pyBALLSipHelper.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/PYTHON/sources.cmake
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/PYTHON/pyServer.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/PYTHON/pyCAPIKernel.h
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-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/KERNEL/standardPredicates.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/KERNEL/atomContainerIterator.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/KERNEL/molecularInteractions.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/KERNEL/secondaryStructure.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/KERNEL/secondaryStructureIterator.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/KERNEL/forEach.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/KERNEL/moleculeIterator.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/KERNEL/protein.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/KERNEL/expressionTree.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/KERNEL/fragmentIterator.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/KERNEL/nucleicAcid.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/KERNEL/kernel.doc
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-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/KERNEL/expressionParser.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/KERNEL/extractors.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/KERNEL/molecule.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/KERNEL/chain.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/KERNEL/PTE.iC
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/KERNEL/atom.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/KERNEL/expression.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/KERNEL/atomIterator.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/KERNEL/nucleicAcidIterator.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/KERNEL/chainIterator.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/KERNEL/atom.iC
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/KERNEL/bond.iC
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/KERNEL/atomContainer.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/KERNEL/PDBAtomIterator.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/KERNEL/residueIterator.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/KERNEL/PTE.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/KERNEL/proteinIterator.h
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-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/KERNEL/predicate.h
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-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/KERNEL/PDBAtom.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/KERNEL/nucleotideIterator.h
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-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/FORMAT/antechamberFile.h
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-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/FORMAT/PDBFile.h
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-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/FORMAT/MOPACOutputFile.h
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-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/FORMAT/PDBRecords.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/FORMAT/lineBasedFile.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/FORMAT/HINFile.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/FORMAT/trajectoryFile.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/FORMAT/PDBdefs.h
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-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/MATHS/analyticalGeometry.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/MATHS/vector2.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/MATHS/numericalIntegrator.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/MATHS/FFT2D.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/MATHS/rombergIntegrator.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/MATHS/sphere3.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/MATHS/complex.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/MATHS/matrix44.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/MATHS/fftwCommon.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/MATHS/cubicSpline2D.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/MATHS/piecewisePolynomial.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/MATHS/vector3.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/MATHS/box3.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/MATHS/sources.cmake
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/MATHS/cubicSpline1D.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/MATHS/piecewiseFunction.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/MATHS/common.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/structure.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/view.doc
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/DIALOGS
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/DIALOGS/dockProgressDialog.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/DIALOGS/raytraceableContourSurfaceDialog.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/DIALOGS/PTEDialog.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/DIALOGS/gridVisualizationDialog.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/DIALOGS/contourSurfaceDialog.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/DIALOGS/assignBondOrderResultsDialog.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/DIALOGS/downloadPDBFile.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/DIALOGS/setCamera.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/DIALOGS/coloringSettingsDialog.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/DIALOGS/pubchemDialog.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/DIALOGS/modifyRepresentationDialog.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/DIALOGS/displayProperties.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/DIALOGS/editSingleShortcut.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/DIALOGS/serverPreferences.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/DIALOGS/setClippingPlane.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/DIALOGS/stereoSettingsDialog.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/DIALOGS/materialSettings.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/DIALOGS/charmmConfigurationDialog.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/DIALOGS/modelSettingsDialog.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/DIALOGS/dockResultDialog.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/DIALOGS/atomOverview.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/DIALOGS/shortcutDialog.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/DIALOGS/molecularDynamicsDialog.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/DIALOGS/clippingDialog.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/DIALOGS/editSettings.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/DIALOGS/bondProperties.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/DIALOGS/generateCrystalDialog.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/DIALOGS/compositeProperties.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/DIALOGS/dockDialog.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/DIALOGS/fieldLinesDialog.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/DIALOGS/networkPreferences.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/DIALOGS/pythonSettings.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/DIALOGS/exportGeometryDialog.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/DIALOGS/preferences.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/DIALOGS/pluginDialog.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/DIALOGS/snapShotVisualisation.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/DIALOGS/minimizationDialog.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/DIALOGS/lightSettings.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/DIALOGS/openSavePreferences.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/DIALOGS/dialogs.doc
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/DIALOGS/peptideDialog.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/DIALOGS/parsedFunctionDialog.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/DIALOGS/amberConfigurationDialog.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/DIALOGS/sources.cmake
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/DIALOGS/assignBondOrderConfigurationDialog.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/DIALOGS/labelDialog.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/DIALOGS/molecularFileDialog.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/DIALOGS/downloadElectronDensity.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/DIALOGS/FDPBDialog.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/DIALOGS/MMFF94ConfigurationDialog.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/DIALOGS/stageSettings.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/DIALOGS/mainControlPreferences.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/DIALOGS/geometricFitDialog.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/DIALOGS/undoManagerDialog.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/WIDGETS
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/WIDGETS/genericControl.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/WIDGETS/helpViewer.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/WIDGETS/logView.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/WIDGETS/shortcutTableView.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/WIDGETS/colorButton.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/WIDGETS/HTMLView.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/WIDGETS/textEditorWidget.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/WIDGETS/pyWidget.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/WIDGETS/testFramework.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/WIDGETS/molecularControl.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/WIDGETS/dockWidget.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/WIDGETS/molecularStructure.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/WIDGETS/datasetControl.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/WIDGETS/widgets.doc
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/WIDGETS/propertyEditor.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/WIDGETS/gridColorWidget.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/WIDGETS/colorTable.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/WIDGETS/geometricControl.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/WIDGETS/hotkeyTable.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/WIDGETS/HTMLPage.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/WIDGETS/sources.cmake
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/WIDGETS/fileObserver.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/WIDGETS/dockingController.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/WIDGETS/scene.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/WIDGETS/SDWidget.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/INPUT
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/INPUT/headTrackingEvent.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/INPUT/inputDeviceDriver.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/INPUT/transformationEvent6D.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/INPUT/inputPlugin.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/INPUT/notificationEvent.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/INPUT/motionTrackingEvent.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/INPUT/buttonEvent.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/INPUT/deviceEvent.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/INPUT/fakeDriver.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/DATATYPE
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/DATATYPE/colorUnitHue.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/DATATYPE/colorHSV.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/DATATYPE/datatype.doc
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/DATATYPE/dataset.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/DATATYPE/colorRGBA.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/DATATYPE/colorUnit.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/DATATYPE/vertex2.iC
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/DATATYPE/vertex1.iC
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/DATATYPE/raytraceableGrid.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/DATATYPE/colorExtensions.iC
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/DATATYPE/colorRGBA.iC
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/DATATYPE/colorMap.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/DATATYPE/colorExtensions.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/DATATYPE/sources.cmake
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/DATATYPE/vertex1.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/DATATYPE/colorUnit.iC
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/DATATYPE/colorUnitHue.iC
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/DATATYPE/standardDatasets.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/DATATYPE/colorHSV.iC
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/DATATYPE/vertex2.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/RENDERING
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/RENDERING/vertexBuffer.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/RENDERING/glDisplayList.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/RENDERING/renderSetup.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/RENDERING/renderWindow.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/RENDERING/glDisplayList.iC
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/RENDERING/glOffscreenTarget.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/RENDERING/camera.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/RENDERING/glRenderWindow.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/RENDERING/pixelFormat.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/RENDERING/rendering.doc
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/RENDERING/RENDERERS
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/RENDERING/RENDERERS/POVRenderer.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/RENDERING/RENDERERS/cudaVolumeRenderer.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/RENDERING/RENDERERS/renderer.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/RENDERING/RENDERERS/glRenderer.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/RENDERING/RENDERERS/glRenderer.iC
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/RENDERING/RENDERERS/XML3DRenderer.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/RENDERING/RENDERERS/bufferedRenderer.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/RENDERING/RENDERERS/rtfactRenderer.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/RENDERING/RENDERERS/STLRenderer.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/RENDERING/RENDERERS/VRMLRenderer.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/RENDERING/RENDERERS/tilingRenderer.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/RENDERING/RENDERERS/raytracingRenderer.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/RENDERING/renderTarget.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/MODELS
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/MODELS/HBondModel.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/MODELS/models.doc
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/MODELS/atomBondModelBaseProcessor.iC
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/MODELS/colorProcessor.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/MODELS/surfaceModel.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/MODELS/lineModel.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/MODELS/standardColorProcessor.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/MODELS/fieldLineCreator.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/MODELS/forceModel.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/MODELS/backboneModel.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/MODELS/colorByGridProcessor.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/MODELS/atomBondModelBaseProcessor.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/MODELS/ballAndStickModel.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/MODELS/modelProcessor.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/MODELS/labelModel.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/MODELS/vanDerWaalsModel.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/MODELS/standardColorProcessor.iC
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/MODELS/cartoonModel.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/MODELS/ballAndStickModel.iC
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/KERNEL
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/KERNEL/connectionObject.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/KERNEL/connectionObject.iC
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/KERNEL/message.iC
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/KERNEL/representation.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/KERNEL/iconLoader.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/KERNEL/shortcutRegistry.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/KERNEL/UIOperationMode.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/KERNEL/stage.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/KERNEL/editOperation.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/KERNEL/mainControl.iC
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/KERNEL/threads.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/KERNEL/compositeManager.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/KERNEL/representationManager.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/KERNEL/serverWidget.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/KERNEL/snapshotManagerInterface.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/KERNEL/preferencesEntry.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/KERNEL/kernel.doc
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/KERNEL/serverWidget.iC
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/KERNEL/message.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/KERNEL/clippingPlane.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/KERNEL/geometricObject.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/KERNEL/sources.cmake
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/KERNEL/modularWidget.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/KERNEL/modelInformation.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/KERNEL/representation.iC
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/KERNEL/mainControl.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/KERNEL/common.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/KERNEL/MODES
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/KERNEL/MODES/moveMode.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/KERNEL/MODES/editMode.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/KERNEL/MODES/rotateMode.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/KERNEL/MODES/interactionModeManager.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/KERNEL/MODES/interactionMode.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/KERNEL/MODES/sources.cmake
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/KERNEL/MODES/pickingMode.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/PLUGIN
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/PLUGIN/inputDevPluginHandler.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/PLUGIN/modularWidgetPlugin.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/PLUGIN/VIEWPlugin.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/PLUGIN/modularWidgetPluginHandler.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/sources.cmake
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/PRIMITIVES
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/PRIMITIVES/box.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/PRIMITIVES/gridVisualisation.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/PRIMITIVES/twoColoredLine.iC
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/PRIMITIVES/quadMesh.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/PRIMITIVES/point.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/PRIMITIVES/label.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/PRIMITIVES/tube.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/PRIMITIVES/disc.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/PRIMITIVES/twoColoredTube.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/PRIMITIVES/primitives.doc
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/PRIMITIVES/sphere.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/PRIMITIVES/mesh.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/PRIMITIVES/multiLine.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/PRIMITIVES/line.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/PRIMITIVES/twoColoredTube.iC
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/PRIMITIVES/simpleBox.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/PRIMITIVES/twoColoredLine.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/XRAY
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/XRAY/xray.doc
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/XRAY/crystalGenerator.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/XRAY/spaceGroupParameters.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/XRAY/crystalInfo.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/XRAY/sources.cmake
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/STRUCTURE
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/STRUCTURE/hybridisationProcessor.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/STRUCTURE/RDFSection.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/STRUCTURE/atomTyper.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/STRUCTURE/reconstructFragmentProcessor.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/STRUCTURE/structure.doc
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/STRUCTURE/geometricTransformations.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/STRUCTURE/triangleEdge.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/STRUCTURE/reducedSurface.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/STRUCTURE/secondaryStructureProcessor.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/STRUCTURE/triangle.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/STRUCTURE/connectedComponentsProcessor.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/STRUCTURE/binaryFingerprintMethods.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/STRUCTURE/RDFIntegrator.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/STRUCTURE/molecularSimilarity.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/STRUCTURE/fragmentDB.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/STRUCTURE/addHydrogenProcessor.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/STRUCTURE/surfaceProcessor.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/STRUCTURE/RDFParameter.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/STRUCTURE/numericalSAS.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/STRUCTURE/residueChecker.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/STRUCTURE/mutator.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/STRUCTURE/rotamerLibrary.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/STRUCTURE/nucleotideMapping.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/STRUCTURE/solventAccessibleSurface.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/STRUCTURE/structureMapper.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/STRUCTURE/solventExcludedSurface.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/STRUCTURE/trianglePoint.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/STRUCTURE/SESFace.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/STRUCTURE/peptideBuilder.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/STRUCTURE/triangulatedSES.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/STRUCTURE/smartsParser.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/STRUCTURE/peptides.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/STRUCTURE/kekulizer.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/STRUCTURE/SASFace.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/STRUCTURE/graphFace.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/STRUCTURE/disulfidBondProcessor.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/STRUCTURE/RSFace.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/STRUCTURE/graphEdge.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/STRUCTURE/atomBijection.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/STRUCTURE/UCK.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/STRUCTURE/sideChainPlacementProcessor.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/STRUCTURE/rGroupAssembler.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/STRUCTURE/HBondProcessor.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/STRUCTURE/sdGenerator.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/STRUCTURE/BONDORDERS
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/STRUCTURE/BONDORDERS/branchAndBoundBondOrderStrategy.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/STRUCTURE/BONDORDERS/bondOrderAssignment.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/STRUCTURE/BONDORDERS/bondOrderAssignmentStrategy.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/STRUCTURE/BONDORDERS/AStarBondOrderStrategy.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/STRUCTURE/BONDORDERS/KGreedyBondOrderStrategy.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/STRUCTURE/BONDORDERS/partialBondOrderAssignment.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/STRUCTURE/BONDORDERS/sources.cmake
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/STRUCTURE/BONDORDERS/FPTBondOrderStrategy.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/STRUCTURE/BONDORDERS/ILPBondOrderStrategy.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/STRUCTURE/SESEdge.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/STRUCTURE/peptideCapProcessor.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/STRUCTURE/residueRotamerSet.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/STRUCTURE/smilesParser.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/STRUCTURE/RSEdge.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/STRUCTURE/smartsMatcher.h
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/STRUCTURE/bindingPocketProcessor.h
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[66]) (./tutorial.bbl [67]
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\OT1/pcr/m/n/12 http://www.riverbankcomputing.co.uk/software/sip/\OT1/ptm/m/n/1
2 ,
[68]) [69] (./tutorial.aux (./introduction.aux) (./example1.aux)
(./example2.aux) (./example3.aux) (./foundation-classes.aux) (./example4.aux)
(./example5.aux) (./kernel.aux) (./view.aux) (./python.aux)) )
(see the transcript file for additional information){/usr/share/texlive/texmf-d
ist/fonts/enc/dvips/base/8r.enc}</usr/share/texlive/texmf-dist/fonts/type1/publ
ic/amsfonts/cm/cmmi10.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/ams
fonts/cm/cmmi12.pfb></usr/share/texlive/texmf-dist/fonts/type1/urw/courier/ucrb
8a.pfb></usr/share/texlive/texmf-dist/fonts/type1/urw/courier/ucrr8a.pfb></usr/
share/texlive/texmf-dist/fonts/type1/urw/courier/ucrro8a.pfb></usr/share/texliv
e/texmf-dist/fonts/type1/urw/helvetic/uhvb8a.pfb></usr/share/texlive/texmf-dist
/fonts/type1/urw/helvetic/uhvr8a.pfb></usr/share/texlive/texmf-dist/fonts/type1
/urw/times/utmb8a.pfb></usr/share/texlive/texmf-dist/fonts/type1/urw/times/utmr
8a.pfb></usr/share/texlive/texmf-dist/fonts/type1/urw/times/utmri8a.pfb>
Output written on tutorial.pdf (73 pages, 442040 bytes).
Transcript written on tutorial.log.
/usr/bin/cmake -E copy /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/doc/TUTORIAL/tutorial.pdf doc/tutorial.pdf
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cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/InputReader.dir/DependInfo.cmake --color=
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make  -f source/APPLICATIONS/TOOLS/CMakeFiles/InputReader.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/InputReader.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make[4]: Nothing to be done for 'source/APPLICATIONS/TOOLS/CMakeFiles/InputReader.dir/build'.
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 60%] Built target InputReader
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/InputPartitioner_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/InputPartitioner_autogen.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/InputPartitioner_autogen.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/InputPartitioner_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/InputPartitioner_autogen.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 60%] Automatic MOC for target InputPartitioner
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/InputPartitioner_autogen.dir/AutogenInfo.json Release
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 60%] Built target InputPartitioner_autogen
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/InputPartitioner.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/InputPartitioner.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/InputPartitioner.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/InputPartitioner.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/InputPartitioner.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make[4]: Nothing to be done for 'source/APPLICATIONS/TOOLS/CMakeFiles/InputPartitioner.dir/build'.
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 60%] Built target InputPartitioner
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/PartialChargesCopy_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/PartialChargesCopy_autogen.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/PartialChargesCopy_autogen.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/PartialChargesCopy_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/PartialChargesCopy_autogen.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 60%] Automatic MOC for target PartialChargesCopy
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/PartialChargesCopy_autogen.dir/AutogenInfo.json Release
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 60%] Built target PartialChargesCopy_autogen
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/PartialChargesCopy.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/PartialChargesCopy.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/PartialChargesCopy.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/PartialChargesCopy.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/PartialChargesCopy.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make[4]: Nothing to be done for 'source/APPLICATIONS/TOOLS/CMakeFiles/PartialChargesCopy.dir/build'.
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 60%] Built target PartialChargesCopy
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/ExtractProteinSequence_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/ExtractProteinSequence_autogen.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/ExtractProteinSequence_autogen.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/ExtractProteinSequence_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/ExtractProteinSequence_autogen.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 60%] Automatic MOC for target ExtractProteinSequence
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/ExtractProteinSequence_autogen.dir/AutogenInfo.json Release
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 60%] Built target ExtractProteinSequence_autogen
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/ExtractProteinSequence.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/ExtractProteinSequence.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/ExtractProteinSequence.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/ExtractProteinSequence.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/ExtractProteinSequence.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make[4]: Nothing to be done for 'source/APPLICATIONS/TOOLS/CMakeFiles/ExtractProteinSequence.dir/build'.
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 60%] Built target ExtractProteinSequence
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/IMGDock_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/IMGDock_autogen.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/IMGDock_autogen.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/IMGDock_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/IMGDock_autogen.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 60%] Automatic MOC for target IMGDock
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/IMGDock_autogen.dir/AutogenInfo.json Release
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 60%] Built target IMGDock_autogen
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/IMGDock.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/IMGDock.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/IMGDock.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/IMGDock.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/IMGDock.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make[4]: Nothing to be done for 'source/APPLICATIONS/TOOLS/CMakeFiles/IMGDock.dir/build'.
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 62%] Built target IMGDock
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/LigandFileSplitter_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/LigandFileSplitter_autogen.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/LigandFileSplitter_autogen.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/LigandFileSplitter_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/LigandFileSplitter_autogen.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 62%] Automatic MOC for target LigandFileSplitter
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/LigandFileSplitter_autogen.dir/AutogenInfo.json Release
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 62%] Built target LigandFileSplitter_autogen
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/LigandFileSplitter.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/LigandFileSplitter.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/LigandFileSplitter.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/LigandFileSplitter.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/LigandFileSplitter.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make[4]: Nothing to be done for 'source/APPLICATIONS/TOOLS/CMakeFiles/LigandFileSplitter.dir/build'.
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 62%] Built target LigandFileSplitter
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/SimilarityAnalyzer_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/SimilarityAnalyzer_autogen.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/SimilarityAnalyzer_autogen.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/SimilarityAnalyzer_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/SimilarityAnalyzer_autogen.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 62%] Automatic MOC for target SimilarityAnalyzer
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/SimilarityAnalyzer_autogen.dir/AutogenInfo.json Release
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 62%] Built target SimilarityAnalyzer_autogen
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/SimilarityAnalyzer.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/SimilarityAnalyzer.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/SimilarityAnalyzer.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/SimilarityAnalyzer.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/SimilarityAnalyzer.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make[4]: Nothing to be done for 'source/APPLICATIONS/TOOLS/CMakeFiles/SimilarityAnalyzer.dir/build'.
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 62%] Built target SimilarityAnalyzer
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/DockResultMerger_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/DockResultMerger_autogen.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/DockResultMerger_autogen.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/DockResultMerger_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/DockResultMerger_autogen.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 62%] Automatic MOC for target DockResultMerger
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/DockResultMerger_autogen.dir/AutogenInfo.json Release
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 62%] Built target DockResultMerger_autogen
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/DockResultMerger.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/DockResultMerger.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/DockResultMerger.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/DockResultMerger.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/DockResultMerger.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make[4]: Nothing to be done for 'source/APPLICATIONS/TOOLS/CMakeFiles/DockResultMerger.dir/build'.
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 62%] Built target DockResultMerger
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/LigCheck_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/LigCheck_autogen.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/LigCheck_autogen.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/LigCheck_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/LigCheck_autogen.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 62%] Automatic MOC for target LigCheck
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/LigCheck_autogen.dir/AutogenInfo.json Release
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 62%] Built target LigCheck_autogen
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/LigCheck.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/LigCheck.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/LigCheck.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/LigCheck.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/LigCheck.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make[4]: Nothing to be done for 'source/APPLICATIONS/TOOLS/CMakeFiles/LigCheck.dir/build'.
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 62%] Built target LigCheck
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/CombiLibGenerator_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/CombiLibGenerator_autogen.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/CombiLibGenerator_autogen.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/CombiLibGenerator_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/CombiLibGenerator_autogen.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 62%] Automatic MOC for target CombiLibGenerator
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/CombiLibGenerator_autogen.dir/AutogenInfo.json Release
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 62%] Built target CombiLibGenerator_autogen
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/CombiLibGenerator.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/CombiLibGenerator.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/CombiLibGenerator.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/CombiLibGenerator.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/CombiLibGenerator.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make[4]: Nothing to be done for 'source/APPLICATIONS/TOOLS/CMakeFiles/CombiLibGenerator.dir/build'.
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 64%] Built target CombiLibGenerator
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/AntitargetRescorer_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/AntitargetRescorer_autogen.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/AntitargetRescorer_autogen.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/AntitargetRescorer_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/AntitargetRescorer_autogen.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 64%] Automatic MOC for target AntitargetRescorer
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/AntitargetRescorer_autogen.dir/AutogenInfo.json Release
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 64%] Built target AntitargetRescorer_autogen
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/AntitargetRescorer.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/AntitargetRescorer.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/AntitargetRescorer.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/AntitargetRescorer.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/AntitargetRescorer.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make[4]: Nothing to be done for 'source/APPLICATIONS/TOOLS/CMakeFiles/AntitargetRescorer.dir/build'.
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 64%] Built target AntitargetRescorer
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/Validator_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/Validator_autogen.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/Validator_autogen.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/Validator_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/Validator_autogen.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 64%] Automatic MOC for target Validator
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/Validator_autogen.dir/AutogenInfo.json Release
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 64%] Built target Validator_autogen
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/Validator.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/Validator.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/Validator.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/Validator.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/Validator.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make[4]: Nothing to be done for 'source/APPLICATIONS/TOOLS/CMakeFiles/Validator.dir/build'.
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 66%] Built target Validator
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/BindingDBCleaner_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/BindingDBCleaner_autogen.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/BindingDBCleaner_autogen.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/BindingDBCleaner_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/BindingDBCleaner_autogen.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 66%] Automatic MOC for target BindingDBCleaner
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/BindingDBCleaner_autogen.dir/AutogenInfo.json Release
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 66%] Built target BindingDBCleaner_autogen
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/BindingDBCleaner.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/BindingDBCleaner.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/BindingDBCleaner.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/BindingDBCleaner.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/BindingDBCleaner.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make[4]: Nothing to be done for 'source/APPLICATIONS/TOOLS/CMakeFiles/BindingDBCleaner.dir/build'.
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 67%] Built target BindingDBCleaner
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/ProteinCheck_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/ProteinCheck_autogen.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/ProteinCheck_autogen.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/ProteinCheck_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/ProteinCheck_autogen.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 67%] Automatic MOC for target ProteinCheck
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/ProteinCheck_autogen.dir/AutogenInfo.json Release
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 67%] Built target ProteinCheck_autogen
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/ProteinCheck.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/ProteinCheck.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/ProteinCheck.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/ProteinCheck.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/ProteinCheck.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make[4]: Nothing to be done for 'source/APPLICATIONS/TOOLS/CMakeFiles/ProteinCheck.dir/build'.
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 67%] Built target ProteinCheck
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/AutoModel_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/AutoModel_autogen.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/AutoModel_autogen.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/AutoModel_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/AutoModel_autogen.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 67%] Automatic MOC for target AutoModel
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/AutoModel_autogen.dir/AutogenInfo.json Release
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 67%] Built target AutoModel_autogen
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/AutoModel.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/AutoModel.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/AutoModel.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/AutoModel.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/AutoModel.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make[4]: Nothing to be done for 'source/APPLICATIONS/TOOLS/CMakeFiles/AutoModel.dir/build'.
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 67%] Built target AutoModel
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/CrystalGenerator_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/CrystalGenerator_autogen.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/CrystalGenerator_autogen.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/CrystalGenerator_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/CrystalGenerator_autogen.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 69%] Automatic MOC for target CrystalGenerator
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/CrystalGenerator_autogen.dir/AutogenInfo.json Release
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 69%] Built target CrystalGenerator_autogen
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/CrystalGenerator.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/CrystalGenerator.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/CrystalGenerator.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/CrystalGenerator.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/CrystalGenerator.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make[4]: Nothing to be done for 'source/APPLICATIONS/TOOLS/CMakeFiles/CrystalGenerator.dir/build'.
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 69%] Built target CrystalGenerator
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/BondOrderAssigner_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/BondOrderAssigner_autogen.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/BondOrderAssigner_autogen.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/BondOrderAssigner_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/BondOrderAssigner_autogen.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 71%] Automatic MOC for target BondOrderAssigner
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/BondOrderAssigner_autogen.dir/AutogenInfo.json Release
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 71%] Built target BondOrderAssigner_autogen
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/BondOrderAssigner.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/BondOrderAssigner.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/BondOrderAssigner.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/BondOrderAssigner.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/BondOrderAssigner.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make[4]: Nothing to be done for 'source/APPLICATIONS/TOOLS/CMakeFiles/BondOrderAssigner.dir/build'.
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 71%] Built target BondOrderAssigner
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/ConstraintsFinder_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/ConstraintsFinder_autogen.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/ConstraintsFinder_autogen.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/ConstraintsFinder_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/ConstraintsFinder_autogen.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 71%] Automatic MOC for target ConstraintsFinder
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/ConstraintsFinder_autogen.dir/AutogenInfo.json Release
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 71%] Built target ConstraintsFinder_autogen
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/ConstraintsFinder.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/ConstraintsFinder.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/ConstraintsFinder.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/ConstraintsFinder.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/ConstraintsFinder.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make[4]: Nothing to be done for 'source/APPLICATIONS/TOOLS/CMakeFiles/ConstraintsFinder.dir/build'.
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 71%] Built target ConstraintsFinder
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/ModelCreator_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/ModelCreator_autogen.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/ModelCreator_autogen.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/ModelCreator_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/ModelCreator_autogen.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 71%] Automatic MOC for target ModelCreator
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/ModelCreator_autogen.dir/AutogenInfo.json Release
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 71%] Built target ModelCreator_autogen
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/ModelCreator.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/ModelCreator.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/ModelCreator.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/ModelCreator.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/ModelCreator.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make[4]: Nothing to be done for 'source/APPLICATIONS/TOOLS/CMakeFiles/ModelCreator.dir/build'.
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 71%] Built target ModelCreator
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/PeptideBuilder_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/PeptideBuilder_autogen.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/PeptideBuilder_autogen.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/PeptideBuilder_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/PeptideBuilder_autogen.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 71%] Automatic MOC for target PeptideBuilder
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/PeptideBuilder_autogen.dir/AutogenInfo.json Release
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 71%] Built target PeptideBuilder_autogen
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/PeptideBuilder.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/PeptideBuilder.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/PeptideBuilder.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/PeptideBuilder.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/PeptideBuilder.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make[4]: Nothing to be done for 'source/APPLICATIONS/TOOLS/CMakeFiles/PeptideBuilder.dir/build'.
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 73%] Built target PeptideBuilder
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/FeatureSelector_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/FeatureSelector_autogen.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/FeatureSelector_autogen.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/FeatureSelector_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/FeatureSelector_autogen.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 73%] Automatic MOC for target FeatureSelector
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/FeatureSelector_autogen.dir/AutogenInfo.json Release
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 73%] Built target FeatureSelector_autogen
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/FeatureSelector.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/FeatureSelector.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/FeatureSelector.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/FeatureSelector.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/FeatureSelector.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make[4]: Nothing to be done for 'source/APPLICATIONS/TOOLS/CMakeFiles/FeatureSelector.dir/build'.
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 75%] Built target FeatureSelector
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/SimpleRescorer_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/SimpleRescorer_autogen.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/SimpleRescorer_autogen.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/SimpleRescorer_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/SimpleRescorer_autogen.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 75%] Automatic MOC for target SimpleRescorer
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/SimpleRescorer_autogen.dir/AutogenInfo.json Release
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 75%] Built target SimpleRescorer_autogen
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/SimpleRescorer.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/SimpleRescorer.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/SimpleRescorer.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/SimpleRescorer.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/SimpleRescorer.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make[4]: Nothing to be done for 'source/APPLICATIONS/TOOLS/CMakeFiles/SimpleRescorer.dir/build'.
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 75%] Built target SimpleRescorer
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/CalculateBindingFreeEnergy_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/CalculateBindingFreeEnergy_autogen.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/CalculateBindingFreeEnergy_autogen.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/CalculateBindingFreeEnergy_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/CalculateBindingFreeEnergy_autogen.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 75%] Automatic MOC for target CalculateBindingFreeEnergy
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/CalculateBindingFreeEnergy_autogen.dir/AutogenInfo.json Release
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 75%] Built target CalculateBindingFreeEnergy_autogen
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/CalculateBindingFreeEnergy.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/CalculateBindingFreeEnergy.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/CalculateBindingFreeEnergy.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/CalculateBindingFreeEnergy.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/CalculateBindingFreeEnergy.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make[4]: Nothing to be done for 'source/APPLICATIONS/TOOLS/CMakeFiles/CalculateBindingFreeEnergy.dir/build'.
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 75%] Built target CalculateBindingFreeEnergy
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/PDBCutter_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/PDBCutter_autogen.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/PDBCutter_autogen.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/PDBCutter_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/PDBCutter_autogen.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 75%] Automatic MOC for target PDBCutter
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/PDBCutter_autogen.dir/AutogenInfo.json Release
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 75%] Built target PDBCutter_autogen
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/PDBCutter.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/PDBCutter.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/PDBCutter.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/PDBCutter.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/PDBCutter.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make[4]: Nothing to be done for 'source/APPLICATIONS/TOOLS/CMakeFiles/PDBCutter.dir/build'.
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 75%] Built target PDBCutter
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/InteractionConstraintDefiner_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/InteractionConstraintDefiner_autogen.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/InteractionConstraintDefiner_autogen.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/InteractionConstraintDefiner_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/InteractionConstraintDefiner_autogen.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 75%] Automatic MOC for target InteractionConstraintDefiner
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/InteractionConstraintDefiner_autogen.dir/AutogenInfo.json Release
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 75%] Built target InteractionConstraintDefiner_autogen
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/InteractionConstraintDefiner.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/InteractionConstraintDefiner.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/InteractionConstraintDefiner.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/InteractionConstraintDefiner.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/InteractionConstraintDefiner.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make[4]: Nothing to be done for 'source/APPLICATIONS/TOOLS/CMakeFiles/InteractionConstraintDefiner.dir/build'.
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 75%] Built target InteractionConstraintDefiner
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/EvenSplit_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/EvenSplit_autogen.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/EvenSplit_autogen.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/EvenSplit_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/EvenSplit_autogen.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 75%] Automatic MOC for target EvenSplit
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/EvenSplit_autogen.dir/AutogenInfo.json Release
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 75%] Built target EvenSplit_autogen
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/EvenSplit.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/EvenSplit.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/EvenSplit.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/EvenSplit.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/EvenSplit.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make[4]: Nothing to be done for 'source/APPLICATIONS/TOOLS/CMakeFiles/EvenSplit.dir/build'.
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 75%] Built target EvenSplit
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/CalculateSolvationFreeEnergy_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/CalculateSolvationFreeEnergy_autogen.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/CalculateSolvationFreeEnergy_autogen.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/CalculateSolvationFreeEnergy_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/CalculateSolvationFreeEnergy_autogen.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 75%] Automatic MOC for target CalculateSolvationFreeEnergy
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/CalculateSolvationFreeEnergy_autogen.dir/AutogenInfo.json Release
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 75%] Built target CalculateSolvationFreeEnergy_autogen
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/CalculateSolvationFreeEnergy.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/CalculateSolvationFreeEnergy.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/CalculateSolvationFreeEnergy.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/CalculateSolvationFreeEnergy.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/CalculateSolvationFreeEnergy.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make[4]: Nothing to be done for 'source/APPLICATIONS/TOOLS/CMakeFiles/CalculateSolvationFreeEnergy.dir/build'.
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 75%] Built target CalculateSolvationFreeEnergy
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/AddMissingAtoms_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/AddMissingAtoms_autogen.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/AddMissingAtoms_autogen.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/AddMissingAtoms_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/AddMissingAtoms_autogen.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 75%] Automatic MOC for target AddMissingAtoms
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/AddMissingAtoms_autogen.dir/AutogenInfo.json Release
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 75%] Built target AddMissingAtoms_autogen
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/AddMissingAtoms.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/AddMissingAtoms.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/AddMissingAtoms.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/AddMissingAtoms.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/AddMissingAtoms.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make[4]: Nothing to be done for 'source/APPLICATIONS/TOOLS/CMakeFiles/AddMissingAtoms.dir/build'.
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 75%] Built target AddMissingAtoms
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/RemoveWater_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/RemoveWater_autogen.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/RemoveWater_autogen.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/RemoveWater_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/RemoveWater_autogen.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 75%] Automatic MOC for target RemoveWater
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/RemoveWater_autogen.dir/AutogenInfo.json Release
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 75%] Built target RemoveWater_autogen
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/RemoveWater.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/RemoveWater.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/RemoveWater.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/RemoveWater.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/RemoveWater.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make[4]: Nothing to be done for 'source/APPLICATIONS/TOOLS/CMakeFiles/RemoveWater.dir/build'.
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 75%] Built target RemoveWater
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/CalculateEnergy_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/CalculateEnergy_autogen.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/CalculateEnergy_autogen.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/CalculateEnergy_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/CalculateEnergy_autogen.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 75%] Automatic MOC for target CalculateEnergy
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/CalculateEnergy_autogen.dir/AutogenInfo.json Release
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 75%] Built target CalculateEnergy_autogen
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/CalculateEnergy.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/CalculateEnergy.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/CalculateEnergy.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/CalculateEnergy.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/CalculateEnergy.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make[4]: Nothing to be done for 'source/APPLICATIONS/TOOLS/CMakeFiles/CalculateEnergy.dir/build'.
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 75%] Built target CalculateEnergy
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/Converter_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/Converter_autogen.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/Converter_autogen.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/Converter_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/Converter_autogen.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 75%] Automatic MOC for target Converter
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/Converter_autogen.dir/AutogenInfo.json Release
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 75%] Built target Converter_autogen
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/Converter.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/Converter.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/Converter.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/Converter.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/Converter.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make[4]: Nothing to be done for 'source/APPLICATIONS/TOOLS/CMakeFiles/Converter.dir/build'.
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 75%] Built target Converter
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/ScoreAnalyzer_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/ScoreAnalyzer_autogen.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/ScoreAnalyzer_autogen.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/ScoreAnalyzer_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/ScoreAnalyzer_autogen.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 75%] Automatic MOC for target ScoreAnalyzer
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/ScoreAnalyzer_autogen.dir/AutogenInfo.json Release
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 75%] Built target ScoreAnalyzer_autogen
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/ScoreAnalyzer.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/ScoreAnalyzer.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/ScoreAnalyzer.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/ScoreAnalyzer.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/ScoreAnalyzer.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make[4]: Nothing to be done for 'source/APPLICATIONS/TOOLS/CMakeFiles/ScoreAnalyzer.dir/build'.
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 75%] Built target ScoreAnalyzer
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/MolPredictor_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/MolPredictor_autogen.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/MolPredictor_autogen.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/MolPredictor_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/MolPredictor_autogen.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 75%] Automatic MOC for target MolPredictor
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/MolPredictor_autogen.dir/AutogenInfo.json Release
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 75%] Built target MolPredictor_autogen
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/MolPredictor.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/MolPredictor.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/MolPredictor.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/MolPredictor.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/MolPredictor.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make[4]: Nothing to be done for 'source/APPLICATIONS/TOOLS/CMakeFiles/MolPredictor.dir/build'.
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 77%] Built target MolPredictor
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/ResidueChecker_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/ResidueChecker_autogen.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/ResidueChecker_autogen.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/ResidueChecker_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/ResidueChecker_autogen.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 77%] Automatic MOC for target ResidueChecker
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/ResidueChecker_autogen.dir/AutogenInfo.json Release
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 77%] Built target ResidueChecker_autogen
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/ResidueChecker.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/ResidueChecker.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/ResidueChecker.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/ResidueChecker.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/ResidueChecker.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make[4]: Nothing to be done for 'source/APPLICATIONS/TOOLS/CMakeFiles/ResidueChecker.dir/build'.
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 77%] Built target ResidueChecker
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/FingerprintSimilaritySearch_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/FingerprintSimilaritySearch_autogen.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/FingerprintSimilaritySearch_autogen.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/FingerprintSimilaritySearch_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/FingerprintSimilaritySearch_autogen.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 77%] Automatic MOC for target FingerprintSimilaritySearch
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/FingerprintSimilaritySearch_autogen.dir/AutogenInfo.json Release
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 77%] Built target FingerprintSimilaritySearch_autogen
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/FingerprintSimilaritySearch.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/FingerprintSimilaritySearch.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/FingerprintSimilaritySearch.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/FingerprintSimilaritySearch.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/FingerprintSimilaritySearch.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make[4]: Nothing to be done for 'source/APPLICATIONS/TOOLS/CMakeFiles/FingerprintSimilaritySearch.dir/build'.
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 77%] Built target FingerprintSimilaritySearch
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/PDBDownload_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/PDBDownload_autogen.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/PDBDownload_autogen.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/PDBDownload_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/PDBDownload_autogen.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 77%] Automatic MOC for target PDBDownload
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/PDBDownload_autogen.dir/AutogenInfo.json Release
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 77%] Built target PDBDownload_autogen
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/PDBDownload.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/PDBDownload.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/PDBDownload.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/PDBDownload.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/PDBDownload.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make[4]: Nothing to be done for 'source/APPLICATIONS/TOOLS/CMakeFiles/PDBDownload.dir/build'.
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 77%] Built target PDBDownload
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/PoseIndices2PDB_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/PoseIndices2PDB_autogen.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/PoseIndices2PDB_autogen.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/PoseIndices2PDB_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/PoseIndices2PDB_autogen.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 77%] Automatic MOC for target PoseIndices2PDB
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/PoseIndices2PDB_autogen.dir/AutogenInfo.json Release
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 77%] Built target PoseIndices2PDB_autogen
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/PoseIndices2PDB.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/PoseIndices2PDB.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/PoseIndices2PDB.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/PoseIndices2PDB.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/PoseIndices2PDB.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make[4]: Nothing to be done for 'source/APPLICATIONS/TOOLS/CMakeFiles/PoseIndices2PDB.dir/build'.
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 77%] Built target PoseIndices2PDB
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/MolCombine_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/MolCombine_autogen.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/MolCombine_autogen.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/MolCombine_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/MolCombine_autogen.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 77%] Automatic MOC for target MolCombine
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/MolCombine_autogen.dir/AutogenInfo.json Release
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 77%] Built target MolCombine_autogen
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/MolCombine.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/MolCombine.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/MolCombine.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/MolCombine.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/MolCombine.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make[4]: Nothing to be done for 'source/APPLICATIONS/TOOLS/CMakeFiles/MolCombine.dir/build'.
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 77%] Built target MolCombine
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/DockPoseClustering_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/DockPoseClustering_autogen.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/DockPoseClustering_autogen.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/DockPoseClustering_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/DockPoseClustering_autogen.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 77%] Automatic MOC for target DockPoseClustering
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/DockPoseClustering_autogen.dir/AutogenInfo.json Release
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 77%] Built target DockPoseClustering_autogen
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/DockPoseClustering.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/DockPoseClustering.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/DockPoseClustering.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/DockPoseClustering.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/DockPoseClustering.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make[4]: Nothing to be done for 'source/APPLICATIONS/TOOLS/CMakeFiles/DockPoseClustering.dir/build'.
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 77%] Built target DockPoseClustering
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/PropertyModifier_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/PropertyModifier_autogen.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/PropertyModifier_autogen.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/PropertyModifier_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/PropertyModifier_autogen.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 77%] Automatic MOC for target PropertyModifier
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/PropertyModifier_autogen.dir/AutogenInfo.json Release
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 77%] Built target PropertyModifier_autogen
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/PropertyModifier.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/PropertyModifier.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/PropertyModifier.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/PropertyModifier.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/PropertyModifier.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make[4]: Nothing to be done for 'source/APPLICATIONS/TOOLS/CMakeFiles/PropertyModifier.dir/build'.
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 77%] Built target PropertyModifier
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/PropertyPlotter_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/PropertyPlotter_autogen.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/PropertyPlotter_autogen.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/PropertyPlotter_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/PropertyPlotter_autogen.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 77%] Automatic MOC for target PropertyPlotter
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/PropertyPlotter_autogen.dir/AutogenInfo.json Release
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 77%] Built target PropertyPlotter_autogen
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/PropertyPlotter.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/PropertyPlotter.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/PropertyPlotter.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/PropertyPlotter.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/PropertyPlotter.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make[4]: Nothing to be done for 'source/APPLICATIONS/TOOLS/CMakeFiles/PropertyPlotter.dir/build'.
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 77%] Built target PropertyPlotter
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/PDBRMSDCalculator_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/PDBRMSDCalculator_autogen.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/PDBRMSDCalculator_autogen.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/PDBRMSDCalculator_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/PDBRMSDCalculator_autogen.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 79%] Automatic MOC for target PDBRMSDCalculator
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/PDBRMSDCalculator_autogen.dir/AutogenInfo.json Release
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 79%] Built target PDBRMSDCalculator_autogen
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/PDBRMSDCalculator.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/PDBRMSDCalculator.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/PDBRMSDCalculator.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/PDBRMSDCalculator.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/PDBRMSDCalculator.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make[4]: Nothing to be done for 'source/APPLICATIONS/TOOLS/CMakeFiles/PDBRMSDCalculator.dir/build'.
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 79%] Built target PDBRMSDCalculator
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/WaterFinder_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/WaterFinder_autogen.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/WaterFinder_autogen.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/WaterFinder_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/WaterFinder_autogen.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 79%] Automatic MOC for target WaterFinder
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/WaterFinder_autogen.dir/AutogenInfo.json Release
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 79%] Built target WaterFinder_autogen
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/WaterFinder.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/WaterFinder.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/WaterFinder.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/WaterFinder.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/WaterFinder.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make[4]: Nothing to be done for 'source/APPLICATIONS/TOOLS/CMakeFiles/WaterFinder.dir/build'.
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 79%] Built target WaterFinder
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/PocketDetector_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/PocketDetector_autogen.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/PocketDetector_autogen.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/PocketDetector_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/PocketDetector_autogen.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 79%] Automatic MOC for target PocketDetector
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/PocketDetector_autogen.dir/AutogenInfo.json Release
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 79%] Built target PocketDetector_autogen
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/PocketDetector.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/PocketDetector.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/PocketDetector.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/PocketDetector.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/PocketDetector.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make[4]: Nothing to be done for 'source/APPLICATIONS/TOOLS/CMakeFiles/PocketDetector.dir/build'.
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 79%] Built target PocketDetector
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/Predictor_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/Predictor_autogen.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/Predictor_autogen.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/Predictor_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/Predictor_autogen.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 79%] Automatic MOC for target Predictor
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/Predictor_autogen.dir/AutogenInfo.json Release
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 79%] Built target Predictor_autogen
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/Predictor.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/Predictor.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/Predictor.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/Predictor.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/Predictor.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make[4]: Nothing to be done for 'source/APPLICATIONS/TOOLS/CMakeFiles/Predictor.dir/build'.
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 81%] Built target Predictor
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/RMSDCalculator_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/RMSDCalculator_autogen.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/RMSDCalculator_autogen.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/RMSDCalculator_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/RMSDCalculator_autogen.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 83%] Automatic MOC for target RMSDCalculator
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/RMSDCalculator_autogen.dir/AutogenInfo.json Release
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 83%] Built target RMSDCalculator_autogen
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/RMSDCalculator.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/RMSDCalculator.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/RMSDCalculator.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/RMSDCalculator.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/RMSDCalculator.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make[4]: Nothing to be done for 'source/APPLICATIONS/TOOLS/CMakeFiles/RMSDCalculator.dir/build'.
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 83%] Built target RMSDCalculator
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/SeparateMolecules_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/SeparateMolecules_autogen.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/SeparateMolecules_autogen.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/SeparateMolecules_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/SeparateMolecules_autogen.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 83%] Automatic MOC for target SeparateMolecules
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/SeparateMolecules_autogen.dir/AutogenInfo.json Release
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 83%] Built target SeparateMolecules_autogen
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/SeparateMolecules.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/SeparateMolecules.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/SeparateMolecules.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/SeparateMolecules.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/SeparateMolecules.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make[4]: Nothing to be done for 'source/APPLICATIONS/TOOLS/CMakeFiles/SeparateMolecules.dir/build'.
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 83%] Built target SeparateMolecules
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/SideChainGridBuilder_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/SideChainGridBuilder_autogen.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/SideChainGridBuilder_autogen.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/SideChainGridBuilder_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/SideChainGridBuilder_autogen.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 83%] Automatic MOC for target SideChainGridBuilder
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/SideChainGridBuilder_autogen.dir/AutogenInfo.json Release
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 83%] Built target SideChainGridBuilder_autogen
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/SideChainGridBuilder.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/SideChainGridBuilder.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/SideChainGridBuilder.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/SideChainGridBuilder.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/SideChainGridBuilder.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make[4]: Nothing to be done for 'source/APPLICATIONS/TOOLS/CMakeFiles/SideChainGridBuilder.dir/build'.
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 83%] Built target SideChainGridBuilder
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/ExtractClustersFromWardTree_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/ExtractClustersFromWardTree_autogen.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/ExtractClustersFromWardTree_autogen.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/ExtractClustersFromWardTree_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/ExtractClustersFromWardTree_autogen.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 83%] Automatic MOC for target ExtractClustersFromWardTree
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/ExtractClustersFromWardTree_autogen.dir/AutogenInfo.json Release
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 83%] Built target ExtractClustersFromWardTree_autogen
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/ExtractClustersFromWardTree.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/ExtractClustersFromWardTree.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/ExtractClustersFromWardTree.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/ExtractClustersFromWardTree.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/ExtractClustersFromWardTree.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make[4]: Nothing to be done for 'source/APPLICATIONS/TOOLS/CMakeFiles/ExtractClustersFromWardTree.dir/build'.
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 84%] Built target ExtractClustersFromWardTree
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/MolFilter_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/MolFilter_autogen.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/MolFilter_autogen.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/MolFilter_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/MolFilter_autogen.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 84%] Automatic MOC for target MolFilter
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/MolFilter_autogen.dir/AutogenInfo.json Release
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 84%] Built target MolFilter_autogen
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/MolFilter.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/MolFilter.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/MolFilter.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/MolFilter.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/MolFilter.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make[4]: Nothing to be done for 'source/APPLICATIONS/TOOLS/CMakeFiles/MolFilter.dir/build'.
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 84%] Built target MolFilter
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/SLICK_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/SLICK_autogen.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/SLICK_autogen.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/SLICK_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/SLICK_autogen.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 84%] Automatic MOC for target SLICK
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/SLICK_autogen.dir/AutogenInfo.json Release
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 84%] Built target SLICK_autogen
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/SLICK.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/SLICK.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/SLICK.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/SLICK.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/SLICK.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make[4]: Nothing to be done for 'source/APPLICATIONS/TOOLS/CMakeFiles/SLICK.dir/build'.
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 86%] Built target SLICK
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/SpatialConstraintDefiner_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/SpatialConstraintDefiner_autogen.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/SpatialConstraintDefiner_autogen.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/SpatialConstraintDefiner_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/SpatialConstraintDefiner_autogen.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 86%] Automatic MOC for target SpatialConstraintDefiner
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/SpatialConstraintDefiner_autogen.dir/AutogenInfo.json Release
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 86%] Built target SpatialConstraintDefiner_autogen
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/SpatialConstraintDefiner.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/SpatialConstraintDefiner.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/SpatialConstraintDefiner.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/SpatialConstraintDefiner.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/SpatialConstraintDefiner.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make[4]: Nothing to be done for 'source/APPLICATIONS/TOOLS/CMakeFiles/SpatialConstraintDefiner.dir/build'.
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 86%] Built target SpatialConstraintDefiner
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/FingerprintSimilarityClustering_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/FingerprintSimilarityClustering_autogen.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/FingerprintSimilarityClustering_autogen.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/FingerprintSimilarityClustering_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/FingerprintSimilarityClustering_autogen.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 86%] Automatic MOC for target FingerprintSimilarityClustering
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/FingerprintSimilarityClustering_autogen.dir/AutogenInfo.json Release
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 86%] Built target FingerprintSimilarityClustering_autogen
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/FingerprintSimilarityClustering.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/FingerprintSimilarityClustering.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/FingerprintSimilarityClustering.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/FingerprintSimilarityClustering.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/FingerprintSimilarityClustering.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make[4]: Nothing to be done for 'source/APPLICATIONS/TOOLS/CMakeFiles/FingerprintSimilarityClustering.dir/build'.
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 86%] Built target FingerprintSimilarityClustering
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/ExtractProteinChains_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/ExtractProteinChains_autogen.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/ExtractProteinChains_autogen.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/ExtractProteinChains_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/ExtractProteinChains_autogen.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 86%] Automatic MOC for target ExtractProteinChains
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/ExtractProteinChains_autogen.dir/AutogenInfo.json Release
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 86%] Built target ExtractProteinChains_autogen
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/ExtractProteinChains.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/ExtractProteinChains.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/ExtractProteinChains.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/ExtractProteinChains.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/ExtractProteinChains.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make[4]: Nothing to be done for 'source/APPLICATIONS/TOOLS/CMakeFiles/ExtractProteinChains.dir/build'.
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 86%] Built target ExtractProteinChains
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/TaGRes_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/TaGRes_autogen.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/TaGRes_autogen.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/TaGRes_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/TaGRes_autogen.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 86%] Automatic MOC for target TaGRes
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/TaGRes_autogen.dir/AutogenInfo.json Release
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 86%] Built target TaGRes_autogen
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/TaGRes.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/TaGRes.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/TaGRes.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/TaGRes.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/TaGRes.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make[4]: Nothing to be done for 'source/APPLICATIONS/TOOLS/CMakeFiles/TaGRes.dir/build'.
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 88%] Built target TaGRes
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/GridBuilder_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/GridBuilder_autogen.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/GridBuilder_autogen.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/GridBuilder_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/GridBuilder_autogen.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 88%] Automatic MOC for target GridBuilder
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/GridBuilder_autogen.dir/AutogenInfo.json Release
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 88%] Built target GridBuilder_autogen
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/GridBuilder.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/GridBuilder.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/GridBuilder.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/GridBuilder.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/GridBuilder.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make[4]: Nothing to be done for 'source/APPLICATIONS/TOOLS/CMakeFiles/GridBuilder.dir/build'.
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 88%] Built target GridBuilder
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/TaGRes-train_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/TaGRes-train_autogen.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/TaGRes-train_autogen.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/TaGRes-train_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/TaGRes-train_autogen.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 88%] Automatic MOC for target TaGRes-train
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/TaGRes-train_autogen.dir/AutogenInfo.json Release
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 88%] Built target TaGRes-train_autogen
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/TaGRes-train.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/TaGRes-train.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/TaGRes-train.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/TaGRes-train.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/TaGRes-train.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make[4]: Nothing to be done for 'source/APPLICATIONS/TOOLS/CMakeFiles/TaGRes-train.dir/build'.
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 88%] Built target TaGRes-train
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/TrajectoryFile2PDBSplitter_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/TrajectoryFile2PDBSplitter_autogen.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/TrajectoryFile2PDBSplitter_autogen.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/TrajectoryFile2PDBSplitter_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/TrajectoryFile2PDBSplitter_autogen.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 88%] Automatic MOC for target TrajectoryFile2PDBSplitter
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/TrajectoryFile2PDBSplitter_autogen.dir/AutogenInfo.json Release
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 88%] Built target TrajectoryFile2PDBSplitter_autogen
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/TrajectoryFile2PDBSplitter.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/TrajectoryFile2PDBSplitter.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/TrajectoryFile2PDBSplitter.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/TrajectoryFile2PDBSplitter.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/TrajectoryFile2PDBSplitter.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make[4]: Nothing to be done for 'source/APPLICATIONS/TOOLS/CMakeFiles/TrajectoryFile2PDBSplitter.dir/build'.
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 90%] Built target TrajectoryFile2PDBSplitter
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/Trajectory2RigidTransformation_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/Trajectory2RigidTransformation_autogen.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/Trajectory2RigidTransformation_autogen.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/Trajectory2RigidTransformation_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/Trajectory2RigidTransformation_autogen.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 90%] Automatic MOC for target Trajectory2RigidTransformation
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/Trajectory2RigidTransformation_autogen.dir/AutogenInfo.json Release
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 90%] Built target Trajectory2RigidTransformation_autogen
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/Trajectory2RigidTransformation.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/Trajectory2RigidTransformation.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/TOOLS/CMakeFiles/Trajectory2RigidTransformation.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/TOOLS/CMakeFiles/Trajectory2RigidTransformation.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/Trajectory2RigidTransformation.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make[4]: Nothing to be done for 'source/APPLICATIONS/TOOLS/CMakeFiles/Trajectory2RigidTransformation.dir/build'.
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 90%] Built target Trajectory2RigidTransformation
make  -f source/APPLICATIONS/UTILITIES/CMakeFiles/solvent_accessibility_autogen.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/solvent_accessibility_autogen.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES/CMakeFiles/solvent_accessibility_autogen.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/UTILITIES/CMakeFiles/solvent_accessibility_autogen.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/solvent_accessibility_autogen.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 90%] Automatic MOC for target solvent_accessibility
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES/CMakeFiles/solvent_accessibility_autogen.dir/AutogenInfo.json Release
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 90%] Built target solvent_accessibility_autogen
make  -f source/APPLICATIONS/UTILITIES/CMakeFiles/solvent_accessibility.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/solvent_accessibility.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES/CMakeFiles/solvent_accessibility.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/UTILITIES/CMakeFiles/solvent_accessibility.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/solvent_accessibility.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make[4]: Nothing to be done for 'source/APPLICATIONS/UTILITIES/CMakeFiles/solvent_accessibility.dir/build'.
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 90%] Built target solvent_accessibility
make  -f source/APPLICATIONS/UTILITIES/CMakeFiles/reconstruct_fragment_autogen.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/reconstruct_fragment_autogen.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES/CMakeFiles/reconstruct_fragment_autogen.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/UTILITIES/CMakeFiles/reconstruct_fragment_autogen.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/reconstruct_fragment_autogen.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 90%] Automatic MOC for target reconstruct_fragment
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES/CMakeFiles/reconstruct_fragment_autogen.dir/AutogenInfo.json Release
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 90%] Built target reconstruct_fragment_autogen
make  -f source/APPLICATIONS/UTILITIES/CMakeFiles/reconstruct_fragment.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/reconstruct_fragment.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES/CMakeFiles/reconstruct_fragment.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/UTILITIES/CMakeFiles/reconstruct_fragment.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/reconstruct_fragment.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make[4]: Nothing to be done for 'source/APPLICATIONS/UTILITIES/CMakeFiles/reconstruct_fragment.dir/build'.
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 90%] Built target reconstruct_fragment
make  -f source/APPLICATIONS/UTILITIES/CMakeFiles/pdb2hin_autogen.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/pdb2hin_autogen.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES/CMakeFiles/pdb2hin_autogen.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/UTILITIES/CMakeFiles/pdb2hin_autogen.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/pdb2hin_autogen.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 90%] Automatic MOC for target pdb2hin
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES/CMakeFiles/pdb2hin_autogen.dir/AutogenInfo.json Release
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 90%] Built target pdb2hin_autogen
make  -f source/APPLICATIONS/UTILITIES/CMakeFiles/pdb2hin.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/pdb2hin.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES/CMakeFiles/pdb2hin.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/UTILITIES/CMakeFiles/pdb2hin.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/pdb2hin.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make[4]: Nothing to be done for 'source/APPLICATIONS/UTILITIES/CMakeFiles/pdb2hin.dir/build'.
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 90%] Built target pdb2hin
make  -f source/APPLICATIONS/UTILITIES/CMakeFiles/pdb2dcd_autogen.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/pdb2dcd_autogen.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES/CMakeFiles/pdb2dcd_autogen.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/UTILITIES/CMakeFiles/pdb2dcd_autogen.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/pdb2dcd_autogen.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 90%] Automatic MOC for target pdb2dcd
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES/CMakeFiles/pdb2dcd_autogen.dir/AutogenInfo.json Release
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 90%] Built target pdb2dcd_autogen
make  -f source/APPLICATIONS/UTILITIES/CMakeFiles/pdb2dcd.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/pdb2dcd.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES/CMakeFiles/pdb2dcd.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/UTILITIES/CMakeFiles/pdb2dcd.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/pdb2dcd.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make[4]: Nothing to be done for 'source/APPLICATIONS/UTILITIES/CMakeFiles/pdb2dcd.dir/build'.
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 90%] Built target pdb2dcd
make  -f source/APPLICATIONS/UTILITIES/CMakeFiles/pdb2amber_naming_autogen.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/pdb2amber_naming_autogen.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES/CMakeFiles/pdb2amber_naming_autogen.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/UTILITIES/CMakeFiles/pdb2amber_naming_autogen.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/pdb2amber_naming_autogen.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 90%] Automatic MOC for target pdb2amber_naming
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES/CMakeFiles/pdb2amber_naming_autogen.dir/AutogenInfo.json Release
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 90%] Built target pdb2amber_naming_autogen
make  -f source/APPLICATIONS/UTILITIES/CMakeFiles/pdb2amber_naming.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/pdb2amber_naming.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES/CMakeFiles/pdb2amber_naming.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/UTILITIES/CMakeFiles/pdb2amber_naming.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/pdb2amber_naming.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make[4]: Nothing to be done for 'source/APPLICATIONS/UTILITIES/CMakeFiles/pdb2amber_naming.dir/build'.
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 90%] Built target pdb2amber_naming
make  -f source/APPLICATIONS/UTILITIES/CMakeFiles/add_hydrogens_autogen.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/add_hydrogens_autogen.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES/CMakeFiles/add_hydrogens_autogen.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/UTILITIES/CMakeFiles/add_hydrogens_autogen.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/add_hydrogens_autogen.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 90%] Automatic MOC for target add_hydrogens
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES/CMakeFiles/add_hydrogens_autogen.dir/AutogenInfo.json Release
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 90%] Built target add_hydrogens_autogen
make  -f source/APPLICATIONS/UTILITIES/CMakeFiles/add_hydrogens.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/add_hydrogens.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES/CMakeFiles/add_hydrogens.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/UTILITIES/CMakeFiles/add_hydrogens.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/add_hydrogens.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make[4]: Nothing to be done for 'source/APPLICATIONS/UTILITIES/CMakeFiles/add_hydrogens.dir/build'.
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 90%] Built target add_hydrogens
make  -f source/APPLICATIONS/UTILITIES/CMakeFiles/hin2mol2_autogen.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/hin2mol2_autogen.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES/CMakeFiles/hin2mol2_autogen.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/UTILITIES/CMakeFiles/hin2mol2_autogen.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/hin2mol2_autogen.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 90%] Automatic MOC for target hin2mol2
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES/CMakeFiles/hin2mol2_autogen.dir/AutogenInfo.json Release
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 90%] Built target hin2mol2_autogen
make  -f source/APPLICATIONS/UTILITIES/CMakeFiles/hin2mol2.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/hin2mol2.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES/CMakeFiles/hin2mol2.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/UTILITIES/CMakeFiles/hin2mol2.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/hin2mol2.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make[4]: Nothing to be done for 'source/APPLICATIONS/UTILITIES/CMakeFiles/hin2mol2.dir/build'.
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 92%] Built target hin2mol2
make  -f source/APPLICATIONS/UTILITIES/CMakeFiles/assign_bond_orders_autogen.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/assign_bond_orders_autogen.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES/CMakeFiles/assign_bond_orders_autogen.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/UTILITIES/CMakeFiles/assign_bond_orders_autogen.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/assign_bond_orders_autogen.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 92%] Automatic MOC for target assign_bond_orders
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES/CMakeFiles/assign_bond_orders_autogen.dir/AutogenInfo.json Release
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 92%] Built target assign_bond_orders_autogen
make  -f source/APPLICATIONS/UTILITIES/CMakeFiles/assign_bond_orders.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/assign_bond_orders.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES/CMakeFiles/assign_bond_orders.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/UTILITIES/CMakeFiles/assign_bond_orders.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/assign_bond_orders.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make[4]: Nothing to be done for 'source/APPLICATIONS/UTILITIES/CMakeFiles/assign_bond_orders.dir/build'.
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 92%] Built target assign_bond_orders
make  -f source/APPLICATIONS/UTILITIES/CMakeFiles/assign_positions_from_template_autogen.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/assign_positions_from_template_autogen.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES/CMakeFiles/assign_positions_from_template_autogen.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/UTILITIES/CMakeFiles/assign_positions_from_template_autogen.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/assign_positions_from_template_autogen.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 92%] Automatic MOC for target assign_positions_from_template
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES/CMakeFiles/assign_positions_from_template_autogen.dir/AutogenInfo.json Release
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 92%] Built target assign_positions_from_template_autogen
make  -f source/APPLICATIONS/UTILITIES/CMakeFiles/assign_positions_from_template.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/assign_positions_from_template.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES/CMakeFiles/assign_positions_from_template.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/UTILITIES/CMakeFiles/assign_positions_from_template.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/assign_positions_from_template.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make[4]: Nothing to be done for 'source/APPLICATIONS/UTILITIES/CMakeFiles/assign_positions_from_template.dir/build'.
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 92%] Built target assign_positions_from_template
make  -f source/APPLICATIONS/UTILITIES/CMakeFiles/calculate_RMSD_autogen.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/calculate_RMSD_autogen.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES/CMakeFiles/calculate_RMSD_autogen.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/UTILITIES/CMakeFiles/calculate_RMSD_autogen.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/calculate_RMSD_autogen.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 92%] Automatic MOC for target calculate_RMSD
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES/CMakeFiles/calculate_RMSD_autogen.dir/AutogenInfo.json Release
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 92%] Built target calculate_RMSD_autogen
make  -f source/APPLICATIONS/UTILITIES/CMakeFiles/calculate_RMSD.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/calculate_RMSD.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES/CMakeFiles/calculate_RMSD.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/UTILITIES/CMakeFiles/calculate_RMSD.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/calculate_RMSD.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make[4]: Nothing to be done for 'source/APPLICATIONS/UTILITIES/CMakeFiles/calculate_RMSD.dir/build'.
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 92%] Built target calculate_RMSD
make  -f source/APPLICATIONS/UTILITIES/CMakeFiles/atomtyper_autogen.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/atomtyper_autogen.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES/CMakeFiles/atomtyper_autogen.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/UTILITIES/CMakeFiles/atomtyper_autogen.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/atomtyper_autogen.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 92%] Automatic MOC for target atomtyper
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES/CMakeFiles/atomtyper_autogen.dir/AutogenInfo.json Release
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 92%] Built target atomtyper_autogen
make  -f source/APPLICATIONS/UTILITIES/CMakeFiles/atomtyper.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/atomtyper.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES/CMakeFiles/atomtyper.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/UTILITIES/CMakeFiles/atomtyper.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/atomtyper.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make[4]: Nothing to be done for 'source/APPLICATIONS/UTILITIES/CMakeFiles/atomtyper.dir/build'.
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 92%] Built target atomtyper
make  -f source/APPLICATIONS/UTILITIES/CMakeFiles/assign_charges_from_rules_autogen.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/assign_charges_from_rules_autogen.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES/CMakeFiles/assign_charges_from_rules_autogen.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/UTILITIES/CMakeFiles/assign_charges_from_rules_autogen.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/assign_charges_from_rules_autogen.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 92%] Automatic MOC for target assign_charges_from_rules
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES/CMakeFiles/assign_charges_from_rules_autogen.dir/AutogenInfo.json Release
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 92%] Built target assign_charges_from_rules_autogen
make  -f source/APPLICATIONS/UTILITIES/CMakeFiles/assign_charges_from_rules.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/assign_charges_from_rules.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES/CMakeFiles/assign_charges_from_rules.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/UTILITIES/CMakeFiles/assign_charges_from_rules.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/assign_charges_from_rules.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make[4]: Nothing to be done for 'source/APPLICATIONS/UTILITIES/CMakeFiles/assign_charges_from_rules.dir/build'.
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 92%] Built target assign_charges_from_rules
make  -f source/APPLICATIONS/UTILITIES/CMakeFiles/clip_protein_around_ligand_autogen.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/clip_protein_around_ligand_autogen.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES/CMakeFiles/clip_protein_around_ligand_autogen.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/UTILITIES/CMakeFiles/clip_protein_around_ligand_autogen.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/clip_protein_around_ligand_autogen.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 92%] Automatic MOC for target clip_protein_around_ligand
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES/CMakeFiles/clip_protein_around_ligand_autogen.dir/AutogenInfo.json Release
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 92%] Built target clip_protein_around_ligand_autogen
make  -f source/APPLICATIONS/UTILITIES/CMakeFiles/clip_protein_around_ligand.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/clip_protein_around_ligand.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES/CMakeFiles/clip_protein_around_ligand.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/UTILITIES/CMakeFiles/clip_protein_around_ligand.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/clip_protein_around_ligand.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make[4]: Nothing to be done for 'source/APPLICATIONS/UTILITIES/CMakeFiles/clip_protein_around_ligand.dir/build'.
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 92%] Built target clip_protein_around_ligand
make  -f source/APPLICATIONS/UTILITIES/CMakeFiles/compute_docking_RMSD_autogen.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/compute_docking_RMSD_autogen.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES/CMakeFiles/compute_docking_RMSD_autogen.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/UTILITIES/CMakeFiles/compute_docking_RMSD_autogen.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/compute_docking_RMSD_autogen.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 92%] Automatic MOC for target compute_docking_RMSD
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES/CMakeFiles/compute_docking_RMSD_autogen.dir/AutogenInfo.json Release
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 92%] Built target compute_docking_RMSD_autogen
make  -f source/APPLICATIONS/UTILITIES/CMakeFiles/compute_docking_RMSD.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/compute_docking_RMSD.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES/CMakeFiles/compute_docking_RMSD.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/UTILITIES/CMakeFiles/compute_docking_RMSD.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/compute_docking_RMSD.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make[4]: Nothing to be done for 'source/APPLICATIONS/UTILITIES/CMakeFiles/compute_docking_RMSD.dir/build'.
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 92%] Built target compute_docking_RMSD
make  -f source/APPLICATIONS/UTILITIES/CMakeFiles/assign_radii_from_rules_autogen.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/assign_radii_from_rules_autogen.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES/CMakeFiles/assign_radii_from_rules_autogen.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/UTILITIES/CMakeFiles/assign_radii_from_rules_autogen.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/assign_radii_from_rules_autogen.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 92%] Automatic MOC for target assign_radii_from_rules
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES/CMakeFiles/assign_radii_from_rules_autogen.dir/AutogenInfo.json Release
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 92%] Built target assign_radii_from_rules_autogen
make  -f source/APPLICATIONS/UTILITIES/CMakeFiles/assign_radii_from_rules.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/assign_radii_from_rules.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES/CMakeFiles/assign_radii_from_rules.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/UTILITIES/CMakeFiles/assign_radii_from_rules.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/assign_radii_from_rules.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make[4]: Nothing to be done for 'source/APPLICATIONS/UTILITIES/CMakeFiles/assign_radii_from_rules.dir/build'.
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 94%] Built target assign_radii_from_rules
make  -f source/APPLICATIONS/UTILITIES/CMakeFiles/assign_typenames_from_rules_autogen.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/assign_typenames_from_rules_autogen.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES/CMakeFiles/assign_typenames_from_rules_autogen.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/UTILITIES/CMakeFiles/assign_typenames_from_rules_autogen.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/assign_typenames_from_rules_autogen.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 94%] Automatic MOC for target assign_typenames_from_rules
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES/CMakeFiles/assign_typenames_from_rules_autogen.dir/AutogenInfo.json Release
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 94%] Built target assign_typenames_from_rules_autogen
make  -f source/APPLICATIONS/UTILITIES/CMakeFiles/assign_typenames_from_rules.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/assign_typenames_from_rules.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES/CMakeFiles/assign_typenames_from_rules.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/UTILITIES/CMakeFiles/assign_typenames_from_rules.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/assign_typenames_from_rules.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make[4]: Nothing to be done for 'source/APPLICATIONS/UTILITIES/CMakeFiles/assign_typenames_from_rules.dir/build'.
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 94%] Built target assign_typenames_from_rules
make  -f source/APPLICATIONS/UTILITIES/CMakeFiles/dcd2dcd_autogen.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/dcd2dcd_autogen.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES/CMakeFiles/dcd2dcd_autogen.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/UTILITIES/CMakeFiles/dcd2dcd_autogen.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/dcd2dcd_autogen.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 94%] Automatic MOC for target dcd2dcd
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES/CMakeFiles/dcd2dcd_autogen.dir/AutogenInfo.json Release
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 94%] Built target dcd2dcd_autogen
make  -f source/APPLICATIONS/UTILITIES/CMakeFiles/dcd2dcd.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/dcd2dcd.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES/CMakeFiles/dcd2dcd.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/UTILITIES/CMakeFiles/dcd2dcd.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/dcd2dcd.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make[4]: Nothing to be done for 'source/APPLICATIONS/UTILITIES/CMakeFiles/dcd2dcd.dir/build'.
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 94%] Built target dcd2dcd
make  -f source/APPLICATIONS/UTILITIES/CMakeFiles/export_fragment_autogen.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/export_fragment_autogen.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES/CMakeFiles/export_fragment_autogen.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/UTILITIES/CMakeFiles/export_fragment_autogen.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/export_fragment_autogen.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 94%] Automatic MOC for target export_fragment
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES/CMakeFiles/export_fragment_autogen.dir/AutogenInfo.json Release
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 94%] Built target export_fragment_autogen
make  -f source/APPLICATIONS/UTILITIES/CMakeFiles/export_fragment.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/export_fragment.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES/CMakeFiles/export_fragment.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/UTILITIES/CMakeFiles/export_fragment.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/export_fragment.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make[4]: Nothing to be done for 'source/APPLICATIONS/UTILITIES/CMakeFiles/export_fragment.dir/build'.
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 94%] Built target export_fragment
make  -f source/APPLICATIONS/UTILITIES/CMakeFiles/file_converter_autogen.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/file_converter_autogen.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES/CMakeFiles/file_converter_autogen.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/UTILITIES/CMakeFiles/file_converter_autogen.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/file_converter_autogen.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 94%] Automatic MOC for target file_converter
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES/CMakeFiles/file_converter_autogen.dir/AutogenInfo.json Release
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 94%] Built target file_converter_autogen
make  -f source/APPLICATIONS/UTILITIES/CMakeFiles/file_converter.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/file_converter.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/UTILITIES /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/UTILITIES/CMakeFiles/file_converter.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/UTILITIES/CMakeFiles/file_converter.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/file_converter.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make[4]: Nothing to be done for 'source/APPLICATIONS/UTILITIES/CMakeFiles/file_converter.dir/build'.
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 94%] Built target file_converter
make  -f source/EXTENSIONS/PRESENTABALL/CMakeFiles/pluginPresentaBALL_autogen.dir/build.make source/EXTENSIONS/PRESENTABALL/CMakeFiles/pluginPresentaBALL_autogen.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/EXTENSIONS/PRESENTABALL /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/EXTENSIONS/PRESENTABALL /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/EXTENSIONS/PRESENTABALL/CMakeFiles/pluginPresentaBALL_autogen.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/EXTENSIONS/PRESENTABALL/CMakeFiles/pluginPresentaBALL_autogen.dir/build.make source/EXTENSIONS/PRESENTABALL/CMakeFiles/pluginPresentaBALL_autogen.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 94%] Automatic MOC for target pluginPresentaBALL
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/EXTENSIONS/PRESENTABALL && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/EXTENSIONS/PRESENTABALL/CMakeFiles/pluginPresentaBALL_autogen.dir/AutogenInfo.json Release
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 94%] Built target pluginPresentaBALL_autogen
make  -f source/EXTENSIONS/PRESENTABALL/CMakeFiles/pluginPresentaBALL.dir/build.make source/EXTENSIONS/PRESENTABALL/CMakeFiles/pluginPresentaBALL.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/EXTENSIONS/PRESENTABALL /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/EXTENSIONS/PRESENTABALL /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/EXTENSIONS/PRESENTABALL/CMakeFiles/pluginPresentaBALL.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/EXTENSIONS/PRESENTABALL/CMakeFiles/pluginPresentaBALL.dir/build.make source/EXTENSIONS/PRESENTABALL/CMakeFiles/pluginPresentaBALL.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make[4]: Nothing to be done for 'source/EXTENSIONS/PRESENTABALL/CMakeFiles/pluginPresentaBALL.dir/build'.
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 94%] Built target pluginPresentaBALL
make  -f source/EXTENSIONS/BALLAXY/CMakeFiles/pluginBALLaxy_autogen.dir/build.make source/EXTENSIONS/BALLAXY/CMakeFiles/pluginBALLaxy_autogen.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/EXTENSIONS/BALLAXY /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/EXTENSIONS/BALLAXY /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/EXTENSIONS/BALLAXY/CMakeFiles/pluginBALLaxy_autogen.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/EXTENSIONS/BALLAXY/CMakeFiles/pluginBALLaxy_autogen.dir/build.make source/EXTENSIONS/BALLAXY/CMakeFiles/pluginBALLaxy_autogen.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 94%] Automatic MOC for target pluginBALLaxy
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/EXTENSIONS/BALLAXY && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/EXTENSIONS/BALLAXY/CMakeFiles/pluginBALLaxy_autogen.dir/AutogenInfo.json Release
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 94%] Built target pluginBALLaxy_autogen
make  -f source/EXTENSIONS/BALLAXY/CMakeFiles/pluginBALLaxy.dir/build.make source/EXTENSIONS/BALLAXY/CMakeFiles/pluginBALLaxy.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/EXTENSIONS/BALLAXY /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/EXTENSIONS/BALLAXY /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/EXTENSIONS/BALLAXY/CMakeFiles/pluginBALLaxy.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/EXTENSIONS/BALLAXY/CMakeFiles/pluginBALLaxy.dir/build.make source/EXTENSIONS/BALLAXY/CMakeFiles/pluginBALLaxy.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make[4]: Nothing to be done for 'source/EXTENSIONS/BALLAXY/CMakeFiles/pluginBALLaxy.dir/build'.
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 96%] Built target pluginBALLaxy
make  -f source/APPLICATIONS/BALLVIEW/CMakeFiles/BALLView_autogen.dir/build.make source/APPLICATIONS/BALLVIEW/CMakeFiles/BALLView_autogen.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/BALLVIEW /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/BALLVIEW /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/BALLVIEW/CMakeFiles/BALLView_autogen.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/BALLVIEW/CMakeFiles/BALLView_autogen.dir/build.make source/APPLICATIONS/BALLVIEW/CMakeFiles/BALLView_autogen.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 96%] Automatic MOC for target BALLView
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/BALLVIEW && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/BALLVIEW/CMakeFiles/BALLView_autogen.dir/AutogenInfo.json Release
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 96%] Built target BALLView_autogen
make  -f source/APPLICATIONS/BALLVIEW/CMakeFiles/BALLView.dir/build.make source/APPLICATIONS/BALLVIEW/CMakeFiles/BALLView.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/BALLVIEW /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/BALLVIEW /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/BALLVIEW/CMakeFiles/BALLView.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/BALLVIEW/CMakeFiles/BALLView.dir/build.make source/APPLICATIONS/BALLVIEW/CMakeFiles/BALLView.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make[4]: Nothing to be done for 'source/APPLICATIONS/BALLVIEW/CMakeFiles/BALLView.dir/build'.
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 96%] Built target BALLView
make  -f source/APPLICATIONS/MMFF94/CMakeFiles/testKekulizer_autogen.dir/build.make source/APPLICATIONS/MMFF94/CMakeFiles/testKekulizer_autogen.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/MMFF94 /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/MMFF94 /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/MMFF94/CMakeFiles/testKekulizer_autogen.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/MMFF94/CMakeFiles/testKekulizer_autogen.dir/build.make source/APPLICATIONS/MMFF94/CMakeFiles/testKekulizer_autogen.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 96%] Automatic MOC for target testKekulizer
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/MMFF94 && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/MMFF94/CMakeFiles/testKekulizer_autogen.dir/AutogenInfo.json Release
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 96%] Built target testKekulizer_autogen
make  -f source/APPLICATIONS/MMFF94/CMakeFiles/testKekulizer.dir/build.make source/APPLICATIONS/MMFF94/CMakeFiles/testKekulizer.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/MMFF94 /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/MMFF94 /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/MMFF94/CMakeFiles/testKekulizer.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/MMFF94/CMakeFiles/testKekulizer.dir/build.make source/APPLICATIONS/MMFF94/CMakeFiles/testKekulizer.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make[4]: Nothing to be done for 'source/APPLICATIONS/MMFF94/CMakeFiles/testKekulizer.dir/build'.
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 96%] Built target testKekulizer
make  -f source/APPLICATIONS/MMFF94/CMakeFiles/splitMMFFTestSuiteOptiFiles_autogen.dir/build.make source/APPLICATIONS/MMFF94/CMakeFiles/splitMMFFTestSuiteOptiFiles_autogen.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/MMFF94 /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/MMFF94 /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/MMFF94/CMakeFiles/splitMMFFTestSuiteOptiFiles_autogen.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/MMFF94/CMakeFiles/splitMMFFTestSuiteOptiFiles_autogen.dir/build.make source/APPLICATIONS/MMFF94/CMakeFiles/splitMMFFTestSuiteOptiFiles_autogen.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 96%] Automatic MOC for target splitMMFFTestSuiteOptiFiles
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/MMFF94 && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/MMFF94/CMakeFiles/splitMMFFTestSuiteOptiFiles_autogen.dir/AutogenInfo.json Release
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 96%] Built target splitMMFFTestSuiteOptiFiles_autogen
make  -f source/APPLICATIONS/MMFF94/CMakeFiles/splitMMFFTestSuiteOptiFiles.dir/build.make source/APPLICATIONS/MMFF94/CMakeFiles/splitMMFFTestSuiteOptiFiles.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/MMFF94 /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/MMFF94 /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/MMFF94/CMakeFiles/splitMMFFTestSuiteOptiFiles.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/MMFF94/CMakeFiles/splitMMFFTestSuiteOptiFiles.dir/build.make source/APPLICATIONS/MMFF94/CMakeFiles/splitMMFFTestSuiteOptiFiles.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make[4]: Nothing to be done for 'source/APPLICATIONS/MMFF94/CMakeFiles/splitMMFFTestSuiteOptiFiles.dir/build'.
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 96%] Built target splitMMFFTestSuiteOptiFiles
make  -f source/APPLICATIONS/MMFF94/CMakeFiles/splitMMFFTestSuiteMolFiles_autogen.dir/build.make source/APPLICATIONS/MMFF94/CMakeFiles/splitMMFFTestSuiteMolFiles_autogen.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/MMFF94 /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/MMFF94 /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/MMFF94/CMakeFiles/splitMMFFTestSuiteMolFiles_autogen.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/MMFF94/CMakeFiles/splitMMFFTestSuiteMolFiles_autogen.dir/build.make source/APPLICATIONS/MMFF94/CMakeFiles/splitMMFFTestSuiteMolFiles_autogen.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 96%] Automatic MOC for target splitMMFFTestSuiteMolFiles
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/MMFF94 && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/MMFF94/CMakeFiles/splitMMFFTestSuiteMolFiles_autogen.dir/AutogenInfo.json Release
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 96%] Built target splitMMFFTestSuiteMolFiles_autogen
make  -f source/APPLICATIONS/MMFF94/CMakeFiles/splitMMFFTestSuiteMolFiles.dir/build.make source/APPLICATIONS/MMFF94/CMakeFiles/splitMMFFTestSuiteMolFiles.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/MMFF94 /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/MMFF94 /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/MMFF94/CMakeFiles/splitMMFFTestSuiteMolFiles.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/MMFF94/CMakeFiles/splitMMFFTestSuiteMolFiles.dir/build.make source/APPLICATIONS/MMFF94/CMakeFiles/splitMMFFTestSuiteMolFiles.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make[4]: Nothing to be done for 'source/APPLICATIONS/MMFF94/CMakeFiles/splitMMFFTestSuiteMolFiles.dir/build'.
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 96%] Built target splitMMFFTestSuiteMolFiles
make  -f source/APPLICATIONS/MMFF94/CMakeFiles/readMMFF94TestFile_autogen.dir/build.make source/APPLICATIONS/MMFF94/CMakeFiles/readMMFF94TestFile_autogen.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/MMFF94 /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/MMFF94 /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/MMFF94/CMakeFiles/readMMFF94TestFile_autogen.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/MMFF94/CMakeFiles/readMMFF94TestFile_autogen.dir/build.make source/APPLICATIONS/MMFF94/CMakeFiles/readMMFF94TestFile_autogen.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 98%] Automatic MOC for target readMMFF94TestFile
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/MMFF94 && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/MMFF94/CMakeFiles/readMMFF94TestFile_autogen.dir/AutogenInfo.json Release
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 98%] Built target readMMFF94TestFile_autogen
make  -f source/APPLICATIONS/MMFF94/CMakeFiles/readMMFF94TestFile.dir/build.make source/APPLICATIONS/MMFF94/CMakeFiles/readMMFF94TestFile.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/MMFF94 /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/MMFF94 /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/MMFF94/CMakeFiles/readMMFF94TestFile.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/MMFF94/CMakeFiles/readMMFF94TestFile.dir/build.make source/APPLICATIONS/MMFF94/CMakeFiles/readMMFF94TestFile.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make[4]: Nothing to be done for 'source/APPLICATIONS/MMFF94/CMakeFiles/readMMFF94TestFile.dir/build'.
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 98%] Built target readMMFF94TestFile
make  -f source/APPLICATIONS/MMFF94/CMakeFiles/compareForces_autogen.dir/build.make source/APPLICATIONS/MMFF94/CMakeFiles/compareForces_autogen.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/MMFF94 /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/MMFF94 /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/MMFF94/CMakeFiles/compareForces_autogen.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/MMFF94/CMakeFiles/compareForces_autogen.dir/build.make source/APPLICATIONS/MMFF94/CMakeFiles/compareForces_autogen.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[100%] Automatic MOC for target compareForces
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/MMFF94 && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/MMFF94/CMakeFiles/compareForces_autogen.dir/AutogenInfo.json Release
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[100%] Built target compareForces_autogen
make  -f source/APPLICATIONS/MMFF94/CMakeFiles/compareForces.dir/build.make source/APPLICATIONS/MMFF94/CMakeFiles/compareForces.dir/depend
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/APPLICATIONS/MMFF94 /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/MMFF94 /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/APPLICATIONS/MMFF94/CMakeFiles/compareForces.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f source/APPLICATIONS/MMFF94/CMakeFiles/compareForces.dir/build.make source/APPLICATIONS/MMFF94/CMakeFiles/compareForces.dir/build
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make[4]: Nothing to be done for 'source/APPLICATIONS/MMFF94/CMakeFiles/compareForces.dir/build'.
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[100%] Built target compareForces
make[3]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
/usr/bin/cmake -E cmake_progress_start /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/CMakeFiles 0
make  -f CMakeFiles/Makefile2 preinstall
make[3]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make[3]: Nothing to be done for 'preinstall'.
make[3]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
Install the project...
/usr/bin/cmake -P cmake_install.cmake
-- Install configuration: "Release"
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/lib/libBALL.so.1.5
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/lib/libBALL.so
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/lib/libVIEW.so.1.5
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/lib/libVIEW.so
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/CHARMM
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/CHARMM/EEF1
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/CHARMM/EEF1/param19_eef1.ini
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/CHARMM/charmm2ini
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/CHARMM/CHARMMNames.dat
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/CHARMM/CHARMMTypes.dat
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/CHARMM/param22.ini
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/BALLView
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/BALLView/translations
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/BALLView/translations/BALLView-zh_TW.ts
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/BALLView/translations/BALLView-de_DE.ts
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/BALLView/shortcuts_12.txt
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/BALLView/shortcuts_15.txt
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/BALLView/html
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/BALLView/html/tutorial05.html
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/BALLView/html/tutorial10.html
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/BALLView/html/demo13.html
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/BALLView/html/tutorial03.html
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/BALLView/html/demo01.html
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/BALLView/html/demo03.html
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/BALLView/html/raytracing_tutorial07.html
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/BALLView/html/tutorial02.html
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/BALLView/html/demo16.html
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/BALLView/html/raytracing_tutorial05.html
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/BALLView/html/tutorial01.html
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/BALLView/html/demo06.html
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/BALLView/html/demo05.html
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/BALLView/html/demo17.html
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/BALLView/html/tutorial07.html
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/BALLView/html/demo04.html
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/BALLView/html/raytracing_tutorial06.html
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/BALLView/html/raytracing_tutorial03.html
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/BALLView/html/tutorial08.html
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/BALLView/html/raytracing_tutorial01.html
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/BALLView/html/tutorial06.html
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/BALLView/html/demo14.html
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/BALLView/html/tutorial09.html
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/BALLView/html/demo12.html
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/BALLView/html/tutorial04.html
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/BALLView/html/raytracing_tutorial02.html
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-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/BALLView/html/demo10.html
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/BALLView/html/demo11.html
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/BALLView/html/demo07.html
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-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/BALLView/html/demo15.html
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/BALLView/html/demo02.html
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/BALLView/html/demo08.html
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/equivalent_atoms.dat
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/iupac2pdb.map
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/SHIFTX.ini
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/ignore_atoms.dat
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/nameConversions.map
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/translate.dat
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/pseudoAtoms.map
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/StandardSpectrum.ini
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HD1__obond__chi-1.dat
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/CO__psi-1__chi.dat
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/CA__chi__aa.dat
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HG13__ha1len__ha1len.dat
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HZ2__phi+1__chi2.dat
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/CO__psi+1__psi.dat
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HN__phi__hnbond.dat
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HB2__index__hnbond.dat
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/CA__psi+1__ss.dat
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HZ2__olen__chi.dat
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HD22__index__hnbond.dat
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HG2__obond__hnbond.dat
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HG13__olen__chi.dat
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HZ3__phi+1__aa.dat
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HB__chi2__chi.dat
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HA__chi+1__ss.dat
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/CO__psi-1__ss.dat
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HB2__ss__chi.dat
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HG13__obond__chi-1.dat
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-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HB3__phi__phi.dat
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HH2__psi+1__psi.dat
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/CA__phi__ssp1.dat
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-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HB2__hnlen__index.dat
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HA__phi+1__ha1bond.dat
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-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/N15__hnlen__row.dat
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HA__ha2bond__chi.dat
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HG__psi__ss.dat
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-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/CB__olenp1__ssbond.dat
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-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HZ3__phi+1__phi+1.dat
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-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HG12__ha1bond__chi+1.dat
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-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/CA__psi-1__chi-1.dat
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-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HG12__ss__ss.dat
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HA__ha2bond__index.dat
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HZ3__psi-1__psi.dat
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/CB__psi-1__indexp1.dat
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-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/CB__ssbond__obondp1.dat
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HN__obond__hnbond.dat
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HD2__hbondstat__chi.dat
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-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/CA__psi__phi.dat
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HE22__phi+1__phi+1.dat
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-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HE21__phi-1__ha1bond.dat
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HB2__obond__chi2.dat
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/N15__ha1bond__ss.dat
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HG__hnbond__ha1bond.dat
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HG3__hnbond__chi2.dat
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-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HB__hnlen__hnlen.dat
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HG__psi+1__psi+1.dat
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-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HB3__obond__chi.dat
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HG1__hnlen__phi.dat
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-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HG13__obond__obond.dat
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-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HN__phi-1__obond.dat
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HG3__phi__index.dat
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HD21__hnbond__chi.dat
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/CO__indexm1__chi-1.dat
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/N15__psi__phi.dat
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HE3__phi__aa.dat
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/CO__ssp1__obond.dat
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HE__ha1bond__ss.dat
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HG1__psi__hnbond.dat
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-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/CA__chi+1__index.dat
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HD3__hbondstat__ha1bond.dat
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HZ__phi__chi+1.dat
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-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HG1__chi+1__chi2.dat
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/N15__psi-1__psi.dat
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HD1__ss__aa.dat
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HE22__psi+1__obond.dat
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HD22__hnlen__index.dat
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HB3__psi__psi.dat
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HG12__hnbond__hnbond.dat
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HG13__phi__phi.dat
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HZ3__chi-1__chi.dat
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HG13__chi__obond.dat
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HB__hnbond__hnbond.dat
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HG2__chi__chi.dat
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HA__psi__obondm1.dat
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HG2__phi__phi.dat
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HE1__aa__aa.dat
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HA__psi__phi.dat
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HN__ha1bond__chi+1.dat
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HD22__hnbond__hnbond.dat
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/CB__phi__chi.dat
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/N15__ssm1__aa-1.dat
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HN__index__hnbondp1.dat
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/CA__ss__chi.dat
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-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HD3__chi+1__index.dat
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-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HD22__aa+1__chi.dat
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HE22__hnbond__hnbond.dat
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HG__chi2__chi.dat
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/N15__row__hnbond.dat
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-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HH2__phi+1__chi2.dat
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-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HA__olenm1__psi.dat
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-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/NMR/splinedata/HN__indexp1__row.dat
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-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/bond_lengths/BondOrder.xml
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/bond_lengths/BondOrderGAFF.xml
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/python
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/python/view_utils.py
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-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/graphics/icons/scalable
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-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/graphics/nsis_installer_header.bmp
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-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/atomtyping
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/atomtyping/AMBERTypes.dat
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/atomtyping/GAFFTypes.dat
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/atomtyping/SYBYLTypes.dat
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-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/solvation/PARSE+ions.rul
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-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/Amber/atom_types.dat
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/Amber/all_amino94.dat
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/Amber/allct.in
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-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/Amber/parm96.dat
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-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/Amber/allnt94.dat
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-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/Amber/parm91S.dat
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-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/Amber/amber94.types
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/Amber/all_nuc94.in
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-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/structures/aspirin.hin
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-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/rotamers/bbdep02.May.sortlib
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-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/XRAY/protein_spacegroups_list.txt
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/XRAY/spacegroups-details.ini
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/gui-test
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/gui-test/selection.btf
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/gui-test/selection.bvp
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/BALL/gui-test/tutorial.btf
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/SCORING
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/SCORING/COMPONENTS
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/SCORING/COMPONENTS/nonpolarSolvation.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/SCORING/COMPONENTS/burialDepth.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/SCORING/COMPONENTS/PLP.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/SCORING/COMPONENTS/hydrogenBondSlick.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/SCORING/COMPONENTS/CHPISlick.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/SCORING/COMPONENTS/CHPI.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/SCORING/COMPONENTS/rotationalEntropy.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/SCORING/COMPONENTS/solvation.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/SCORING/COMPONENTS/electrostatic.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/SCORING/COMPONENTS/hydrogenBond.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/SCORING/COMPONENTS/advElectrostatic.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/SCORING/COMPONENTS/fragmentationalSolvation.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/SCORING/COMPONENTS/vanDerWaalsSlick.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/SCORING/COMPONENTS/polarSolvation.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/SCORING/COMPONENTS/buriedPolar.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/SCORING/COMPONENTS/aromaticRingStacking.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/SCORING/COMPONENTS/PB.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/SCORING/COMPONENTS/sources.cmake
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/SCORING/COMPONENTS/lipophilic.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/SCORING/COMPONENTS/vanDerWaals.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/SCORING/COMPONENTS/polarity.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/SCORING/COMPONENTS/fresnoTypes.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/SCORING/FUNCTIONS
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/SCORING/FUNCTIONS/MMScoring.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/SCORING/FUNCTIONS/amberEvaluation.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/SCORING/FUNCTIONS/energeticEvaluation.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/SCORING/FUNCTIONS/gridedPLP.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/SCORING/FUNCTIONS/gridedMM.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/SCORING/FUNCTIONS/rescoring1D.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/SCORING/FUNCTIONS/slickScore.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/SCORING/FUNCTIONS/PBScoring.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/SCORING/FUNCTIONS/forceFieldEvaluation.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/SCORING/FUNCTIONS/PLPScoring.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/SCORING/FUNCTIONS/slickEnergy.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/SCORING/FUNCTIONS/rescoring4D.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/SCORING/FUNCTIONS/randomEvaluation.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/SCORING/FUNCTIONS/sources.cmake
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/SCORING/FUNCTIONS/rescoring3D.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/SCORING/FUNCTIONS/rescoring.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/SCORING/sources.cmake
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/SCORING/COMMON
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/SCORING/COMMON/linearBaseFunction.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/SCORING/COMMON/diffGridBasedScoring.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/SCORING/COMMON/diffScoringFunction.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/SCORING/COMMON/fermiBaseFunction.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/SCORING/COMMON/rescorer.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/SCORING/COMMON/gridBasedScoring.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/SCORING/COMMON/scoringOptimizer.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/SCORING/COMMON/scoringFunction.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/SCORING/COMMON/scoreGridSet.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/SCORING/COMMON/sources.cmake
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/SCORING/COMMON/scoringComponent.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/SCORING/COMMON/baseFunction.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/CONCEPT
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/CONCEPT/stdIteratorWrapper.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/CONCEPT/concept.doc
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/CONCEPT/composite.iC
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/CONCEPT/object.iC
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/CONCEPT/processor.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/CONCEPT/selectable.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/CONCEPT/moleculeObjectCreator.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/CONCEPT/property.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/CONCEPT/randomAccessIterator.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/CONCEPT/autoDeletable.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/CONCEPT/textPersistenceManager.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/CONCEPT/comparator.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/CONCEPT/client.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/CONCEPT/persistenceManager.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/CONCEPT/preferencesObject.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/CONCEPT/baseIterator.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/CONCEPT/forwardIterator.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/CONCEPT/autoDeletable.iC
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/CONCEPT/enumerator.iC
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/CONCEPT/selectable.iC
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/CONCEPT/persistenceManager.iC
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/CONCEPT/baseFunctor.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/CONCEPT/XDRPersistenceManager.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/CONCEPT/timeStamp.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/CONCEPT/embeddable.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/CONCEPT/visitor.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/CONCEPT/benchmark.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/CONCEPT/enumerator.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/CONCEPT/molecularInformation.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/CONCEPT/factory.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/CONCEPT/sources.cmake
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/CONCEPT/persistentObject.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/CONCEPT/property.iC
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/CONCEPT/classTest.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/CONCEPT/composite.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/CONCEPT/predicate.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/CONCEPT/bidirectionalIterator.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/CONCEPT/object.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/CONCEPT/timeStamp.iC
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/CONCEPT/objectCreator.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/CONFIG
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/CONFIG/sources.cmake
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/energy.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/BALL.doc
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/NMR
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/NMR/randomCoilShiftProcessor.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/NMR/clearShiftProcessor.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/NMR/haighMallionShiftProcessor.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/NMR/EFShiftProcessor.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/NMR/HBondShiftProcessor.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/NMR/shiftModel1D.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/NMR/createSpectrumProcessor.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/NMR/peak.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/NMR/shiftModel.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/NMR/spectrum.iC
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/NMR/johnsonBoveyShiftProcessor.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/NMR/shiftModule.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/NMR/empiricalHSShiftProcessor.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/NMR/experiment.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/NMR/shiftModel2D.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/NMR/anisotropyShiftProcessor.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/NMR/peakList.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/NMR/sources.cmake
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/NMR/spectrum.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/NMR/nmr.doc
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/MOLMEC
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/MOLMEC/MDSIMULATION
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/MOLMEC/MDSIMULATION/microCanonicalMD.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/MOLMEC/MDSIMULATION/sources.cmake
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/MOLMEC/MDSIMULATION/molecularDynamics.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/MOLMEC/MDSIMULATION/mdsimulation.doc
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/MOLMEC/MDSIMULATION/canonicalMD.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/MOLMEC/CHARMM
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/MOLMEC/CHARMM/charmm.doc
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/MOLMEC/CHARMM/charmm.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/MOLMEC/CHARMM/charmmStretch.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/MOLMEC/CHARMM/charmmTorsion.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/MOLMEC/CHARMM/charmmNonBonded.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/MOLMEC/CHARMM/charmmImproperTorsion.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/MOLMEC/CHARMM/sources.cmake
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/MOLMEC/CHARMM/charmmBend.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/MOLMEC/MINIMIZATION
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/MOLMEC/MINIMIZATION/lineSearch.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/MOLMEC/MINIMIZATION/conjugateGradient.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/MOLMEC/MINIMIZATION/energyMinimizer.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/MOLMEC/MINIMIZATION/strangLBFGS.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/MOLMEC/MINIMIZATION/steepestDescent.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/MOLMEC/MINIMIZATION/minimization.doc
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/MOLMEC/MINIMIZATION/sources.cmake
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/MOLMEC/MINIMIZATION/shiftedLVMM.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/MOLMEC/molmec.doc
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/MOLMEC/PARAMETER
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/MOLMEC/PARAMETER/potential1210.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/MOLMEC/PARAMETER/quadraticBondStretch.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/MOLMEC/PARAMETER/quadraticAngleBend.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/MOLMEC/PARAMETER/atomTypes.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/MOLMEC/PARAMETER/residueTorsions.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/MOLMEC/PARAMETER/forceFieldParameters.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/MOLMEC/PARAMETER/sources.cmake
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/MOLMEC/PARAMETER/parameter.doc
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/MOLMEC/PARAMETER/cosineTorsion.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/MOLMEC/PARAMETER/charmmEEF1.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/MOLMEC/PARAMETER/templates.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/MOLMEC/PARAMETER/quadraticImproperTorsion.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/MOLMEC/PARAMETER/lennardJones.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/MOLMEC/MMFF94
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/MOLMEC/MMFF94/MMFF94NonBonded.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/MOLMEC/MMFF94/MMFF94.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/MOLMEC/MMFF94/MMFF94Processors.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/MOLMEC/MMFF94/MMFF94.doc
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/MOLMEC/MMFF94/MMFF94OutOfPlaneBend.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/MOLMEC/MMFF94/sources.cmake
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/MOLMEC/MMFF94/MMFF94Torsion.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/MOLMEC/MMFF94/MMFF94StretchBend.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/MOLMEC/sources.cmake
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/MOLMEC/COMMON
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/MOLMEC/COMMON/snapShot.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/MOLMEC/COMMON/gradient.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/MOLMEC/COMMON/radiusRuleProcessor.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/MOLMEC/COMMON/bendComponent.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/MOLMEC/COMMON/common.doc
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/MOLMEC/COMMON/forceField.iC
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/MOLMEC/COMMON/assignTypes.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/MOLMEC/COMMON/chargeRuleProcessor.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/MOLMEC/COMMON/ruleEvaluator.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/MOLMEC/COMMON/ruleProcessor.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/MOLMEC/COMMON/stretchComponent.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/MOLMEC/COMMON/forceField.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/MOLMEC/COMMON/snapShotManager.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/MOLMEC/COMMON/forceFieldComponent.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/MOLMEC/COMMON/support.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/MOLMEC/COMMON/typenameRuleProcessor.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/MOLMEC/COMMON/sources.cmake
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/MOLMEC/COMMON/atomVector.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/MOLMEC/COMMON/periodicBoundary.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/MOLMEC/COMMON/typeRuleProcessor.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/MOLMEC/AMBER
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/MOLMEC/AMBER/amberTorsion.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/MOLMEC/AMBER/amberBend.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/MOLMEC/AMBER/GAFFTypeProcessor.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/MOLMEC/AMBER/amber.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/MOLMEC/AMBER/GAFFCESParser.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/MOLMEC/AMBER/amber.doc
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/MOLMEC/AMBER/sources.cmake
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/MOLMEC/AMBER/amberStretch.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/MOLMEC/AMBER/amberNonBonded.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/SYSTEM
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/SYSTEM/file.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/SYSTEM/directory.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/SYSTEM/file.iC
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/SYSTEM/timer.iC
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/SYSTEM/MPISupport.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/SYSTEM/sysinfo.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/SYSTEM/directory.iC
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/SYSTEM/path.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/SYSTEM/binaryFileAdaptor.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/SYSTEM/mutex.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/SYSTEM/networking.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/SYSTEM/system.doc
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/SYSTEM/sources.cmake
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/SYSTEM/binaryFileAdaptor.iC
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/SYSTEM/simpleDownloader.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/SYSTEM/timer.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/SYSTEM/fileSystem.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/maths.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/SOLVATION
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/SOLVATION/generalizedBornCase.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/SOLVATION/solvation.doc
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/SOLVATION/pierottiCavFreeEnergyProcessor.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/SOLVATION/reissCavFreeEnergyProcessor.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/SOLVATION/pairExpInteractionEnergyProcessor.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/SOLVATION/pairExpRDFIntegrator.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/SOLVATION/ooiEnergy.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/SOLVATION/uhligCavFreeEnergyProcessor.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/SOLVATION/pair6_12InteractionEnergyProcessor.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/SOLVATION/claverieParameter.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/SOLVATION/solventParameter.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/SOLVATION/pair6_12RDFIntegrator.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/SOLVATION/sources.cmake
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/SOLVATION/electrostaticPotentialCalculator.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/SOLVATION/solventDescriptor.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/SOLVATION/PCMCavFreeEnergyProcessor.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/SOLVATION/poissonBoltzmann.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/SOLVATION/molecularSurfaceGrid.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/QSAR
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/QSAR/ldaModel.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/QSAR/logitModel.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/QSAR/kpcrModel.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/QSAR/connectivityBase.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/QSAR/configIO.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/QSAR/featureSelection.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/QSAR/nonlinearModel.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/QSAR/ringPerceptionProcessor.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/QSAR/allModel.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/QSAR/snBModel.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/QSAR/svrModel.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/QSAR/connectivityDescriptors.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/QSAR/validation.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/QSAR/knnModel.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/QSAR/kernelModel.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/QSAR/modelFactory.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/QSAR/simpleDescriptors.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/QSAR/registry.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/QSAR/statistics.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/QSAR/surfaceBase.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/QSAR/plsModel.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/QSAR/exception.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/QSAR/libsvmModel.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/QSAR/latentVariableModel.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/QSAR/QSARData.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/QSAR/classificationValidation.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/QSAR/classificationModel.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/QSAR/partialChargeBase.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/QSAR/bayesModel.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/QSAR/descriptor.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/QSAR/aromaticityProcessor.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/QSAR/oplsModel.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/QSAR/gpModel.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/QSAR/kernel.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/QSAR/Model.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/QSAR/regressionValidation.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/QSAR/kplsModel.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/QSAR/automaticModelCreator.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/QSAR/partialChargeProcessor.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/QSAR/sources.cmake
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/QSAR/rrModel.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/QSAR/linearModel.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/QSAR/qsar.doc
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/QSAR/nBModel.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/QSAR/mlrModel.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/QSAR/regressionModel.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/QSAR/pcrModel.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/QSAR/surfaceDescriptors.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/QSAR/NMRDescriptors.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/QSAR/common.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/QSAR/partialChargeDescriptors.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/QSAR/svmModel.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/QSAR/simpleBase.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/molmec.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/solvation.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/DOCKING
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/DOCKING/IMGDOCK
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/DOCKING/IMGDOCK/IMGDock.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/DOCKING/IMGDOCK/sources.cmake
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/DOCKING/GENETICDOCK
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/DOCKING/GENETICDOCK/geneticAlgorithm.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/DOCKING/GENETICDOCK/rotateBonds.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/DOCKING/GENETICDOCK/parameter.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/DOCKING/GENETICDOCK/rotateBond.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/DOCKING/GENETICDOCK/geneticIndividual.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/DOCKING/GENETICDOCK/sources.cmake
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/DOCKING/GENETICDOCK/genes.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/DOCKING/GENETICDOCK/dockProblem.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/DOCKING/GENETICDOCK/evolutionaryDocking.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/DOCKING/geometricFit.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/DOCKING/sources.cmake
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/DOCKING/COMMON
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/DOCKING/COMMON/flexDefinition.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/DOCKING/COMMON/constraints.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/DOCKING/COMMON/dockResult.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/DOCKING/COMMON/poseClustering.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/DOCKING/COMMON/gridAnalysis.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/DOCKING/COMMON/structurePreparer.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/DOCKING/COMMON/dockingAlgorithm.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/DOCKING/COMMON/flexibleMolecule.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/DOCKING/COMMON/sideChainOptimizer.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/DOCKING/COMMON/staticLigandFragment.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/DOCKING/COMMON/sources.cmake
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/DOCKING/COMMON/conformation.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/DOCKING/COMMON/receptor.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/DOCKING/COMMON/conformationSet.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/DOCKING/COMMON/result.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/DATATYPE
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/DATATYPE/hashSet.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/DATATYPE/contourSurface.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/DATATYPE/bitVector.iC
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/DATATYPE/GRAPH
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/DATATYPE/GRAPH/molecularGraph.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/DATATYPE/GRAPH/treeWidth.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/DATATYPE/GRAPH/graphAlgorithms.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/DATATYPE/GRAPH/treeWidth.iC
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/DATATYPE/GRAPH/sources.cmake
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/DATATYPE/list.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/DATATYPE/quadruple.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/DATATYPE/datatype.doc
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/DATATYPE/hashGrid.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/DATATYPE/forEach.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/DATATYPE/regularExpression.iC
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/DATATYPE/options.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/DATATYPE/regularData1D.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/DATATYPE/listSort.mac
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/DATATYPE/regularExpression.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/DATATYPE/contourLine.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/DATATYPE/string.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/DATATYPE/regularData2D.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/DATATYPE/string.iC
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/DATATYPE/hashMap.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/DATATYPE/contour.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/DATATYPE/bitVector.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/DATATYPE/sources.cmake
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/DATATYPE/stringHashMap.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/DATATYPE/regularData3D.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/DATATYPE/stringHashSet.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/DATATYPE/triple.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/concept.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/system.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/PYTHON
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/PYTHON/pyKernel.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/PYTHON/python.doc
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/PYTHON/pyInterpreter.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/PYTHON/EXTENSIONS
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/PYTHON/EXTENSIONS/pyUnaryProcessors.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/PYTHON/EXTENSIONS/pyIndexList.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/PYTHON/EXTENSIONS/pyDatasetVector.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/PYTHON/EXTENSIONS/pyConstant.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/PYTHON/EXTENSIONS/pyColorRGBAVector.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/PYTHON/EXTENSIONS/sources.cmake
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/PYTHON/EXTENSIONS/pyListHelper.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/PYTHON/EXTENSIONS/pyCompositeList.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/PYTHON/EXTENSIONS/pyBALLSipHelper.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/PYTHON/sources.cmake
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/PYTHON/pyServer.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/PYTHON/pyCAPIKernel.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/datatype.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/KERNEL
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/KERNEL/expressionPredicate.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/KERNEL/global.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/KERNEL/standardPredicates.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/KERNEL/atomContainerIterator.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/KERNEL/molecularInteractions.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/KERNEL/secondaryStructure.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/KERNEL/secondaryStructureIterator.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/KERNEL/forEach.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/KERNEL/moleculeIterator.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/KERNEL/protein.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/KERNEL/expressionTree.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/KERNEL/fragmentIterator.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/KERNEL/nucleicAcid.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/KERNEL/kernel.doc
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/KERNEL/system.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/KERNEL/residue.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/KERNEL/expressionParser.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/KERNEL/extractors.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/KERNEL/molecule.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/KERNEL/chain.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/KERNEL/PTE.iC
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/KERNEL/atom.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/KERNEL/expression.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/KERNEL/atomIterator.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/KERNEL/nucleicAcidIterator.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/KERNEL/chainIterator.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/KERNEL/atom.iC
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/KERNEL/bond.iC
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/KERNEL/atomContainer.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/KERNEL/PDBAtomIterator.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/KERNEL/residueIterator.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/KERNEL/PTE.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/KERNEL/proteinIterator.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/KERNEL/sources.cmake
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/KERNEL/selector.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/KERNEL/bondIterator.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/KERNEL/predicate.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/KERNEL/bond.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/KERNEL/nucleotide.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/KERNEL/PDBAtom.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/KERNEL/nucleotideIterator.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/KERNEL/fragment.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/KERNEL/iterator.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/PLUGIN
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/PLUGIN/pluginManager.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/PLUGIN/plugin.doc
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/PLUGIN/pluginHandler.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/PLUGIN/BALLPlugin.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/PLUGIN/sources.cmake
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/ENERGY
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/ENERGY/atomicContactEnergy.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/ENERGY/composedEnergyProcessor.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/ENERGY/energy.doc
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/ENERGY/energyProcessor.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/ENERGY/sources.cmake
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/ENERGY/distanceCoulomb.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/ENERGY/coulomb.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/kernel.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/FORMAT
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/FORMAT/dockResultFile.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/FORMAT/trajectoryFileFactory.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/FORMAT/parameterSection.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/FORMAT/genericMolFile.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/FORMAT/antechamberFile.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/FORMAT/GAMESSDatFile.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/FORMAT/commandlineParser.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/FORMAT/CCP4File.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/FORMAT/PDBFile.iC
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/FORMAT/molFileFactory.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/FORMAT/lineBasedFile.iC
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/FORMAT/GAMESSLogFile.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/FORMAT/KCFFile.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/FORMAT/MOL2File.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/FORMAT/CIFFile.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/FORMAT/pubchemDownloader.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/FORMAT/resourceFile.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/FORMAT/XYZFile.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/FORMAT/SDFile.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/FORMAT/bruker2DFile.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/FORMAT/bruker1DFile.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/FORMAT/INIFile.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/FORMAT/PDBFile.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/FORMAT/resourceFile.iC
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/FORMAT/NMRStarFile.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/FORMAT/TRRFile.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/FORMAT/DCDFile.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/FORMAT/HMOFile.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/FORMAT/sources.cmake
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/FORMAT/PDBInfo.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/FORMAT/format.doc
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/FORMAT/MOPACInputFile.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/FORMAT/JCAMPFile.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/FORMAT/amiraMeshFile.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/FORMAT/MOLFile.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/FORMAT/MOPACOutputFile.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/FORMAT/parameters.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/FORMAT/PDBRecords.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/FORMAT/lineBasedFile.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/FORMAT/HINFile.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/FORMAT/trajectoryFile.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/FORMAT/PDBdefs.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/FORMAT/paramFile.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/FORMAT/DSN6File.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/FORMAT/SCWRLRotamerFile.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/COMMON
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/COMMON/global.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/COMMON/version.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/COMMON/parserDefinitions.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/COMMON/debug.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/COMMON/hash.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/COMMON/rtti.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/COMMON/common.doc
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/COMMON/exception.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/COMMON/create.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/COMMON/logStream.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/COMMON/logStream.iC
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/COMMON/init.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/COMMON/constants.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/COMMON/sources.cmake
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/COMMON/macros.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/format.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/MATHS
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/MATHS/simpleBox3.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/MATHS/circle3.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/MATHS/FFT1D.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/MATHS/angle.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/MATHS/quaternion.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/MATHS/FFT3D.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/MATHS/surface.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/MATHS/parsedFunction.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/MATHS/vector4.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/MATHS/function.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/MATHS/plane3.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/MATHS/line3.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/MATHS/maths.doc
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/MATHS/analyticalGeometry.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/MATHS/vector2.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/MATHS/numericalIntegrator.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/MATHS/FFT2D.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/MATHS/rombergIntegrator.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/MATHS/sphere3.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/MATHS/complex.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/MATHS/matrix44.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/MATHS/fftwCommon.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/MATHS/cubicSpline2D.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/MATHS/piecewisePolynomial.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/MATHS/vector3.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/MATHS/box3.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/MATHS/sources.cmake
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/MATHS/cubicSpline1D.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/MATHS/piecewiseFunction.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/MATHS/common.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/structure.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/view.doc
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/DIALOGS
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/DIALOGS/dockProgressDialog.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/DIALOGS/raytraceableContourSurfaceDialog.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/DIALOGS/PTEDialog.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/DIALOGS/gridVisualizationDialog.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/DIALOGS/contourSurfaceDialog.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/DIALOGS/assignBondOrderResultsDialog.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/DIALOGS/downloadPDBFile.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/DIALOGS/setCamera.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/DIALOGS/coloringSettingsDialog.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/DIALOGS/pubchemDialog.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/DIALOGS/modifyRepresentationDialog.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/DIALOGS/displayProperties.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/DIALOGS/editSingleShortcut.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/DIALOGS/serverPreferences.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/DIALOGS/setClippingPlane.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/DIALOGS/stereoSettingsDialog.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/DIALOGS/materialSettings.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/DIALOGS/charmmConfigurationDialog.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/DIALOGS/modelSettingsDialog.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/DIALOGS/dockResultDialog.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/DIALOGS/atomOverview.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/DIALOGS/shortcutDialog.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/DIALOGS/molecularDynamicsDialog.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/DIALOGS/clippingDialog.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/DIALOGS/editSettings.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/DIALOGS/bondProperties.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/DIALOGS/generateCrystalDialog.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/DIALOGS/compositeProperties.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/DIALOGS/dockDialog.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/DIALOGS/fieldLinesDialog.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/DIALOGS/networkPreferences.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/DIALOGS/pythonSettings.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/DIALOGS/exportGeometryDialog.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/DIALOGS/preferences.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/DIALOGS/pluginDialog.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/DIALOGS/snapShotVisualisation.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/DIALOGS/minimizationDialog.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/DIALOGS/lightSettings.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/DIALOGS/openSavePreferences.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/DIALOGS/dialogs.doc
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/DIALOGS/peptideDialog.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/DIALOGS/parsedFunctionDialog.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/DIALOGS/amberConfigurationDialog.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/DIALOGS/sources.cmake
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/DIALOGS/assignBondOrderConfigurationDialog.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/DIALOGS/labelDialog.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/DIALOGS/molecularFileDialog.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/DIALOGS/downloadElectronDensity.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/DIALOGS/FDPBDialog.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/DIALOGS/MMFF94ConfigurationDialog.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/DIALOGS/stageSettings.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/DIALOGS/mainControlPreferences.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/DIALOGS/geometricFitDialog.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/DIALOGS/undoManagerDialog.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/WIDGETS
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/WIDGETS/genericControl.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/WIDGETS/helpViewer.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/WIDGETS/logView.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/WIDGETS/shortcutTableView.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/WIDGETS/colorButton.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/WIDGETS/HTMLView.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/WIDGETS/textEditorWidget.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/WIDGETS/pyWidget.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/WIDGETS/testFramework.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/WIDGETS/molecularControl.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/WIDGETS/dockWidget.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/WIDGETS/molecularStructure.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/WIDGETS/datasetControl.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/WIDGETS/widgets.doc
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/WIDGETS/propertyEditor.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/WIDGETS/gridColorWidget.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/WIDGETS/colorTable.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/WIDGETS/geometricControl.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/WIDGETS/hotkeyTable.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/WIDGETS/HTMLPage.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/WIDGETS/sources.cmake
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/WIDGETS/fileObserver.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/WIDGETS/dockingController.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/WIDGETS/scene.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/WIDGETS/SDWidget.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/INPUT
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/INPUT/headTrackingEvent.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/INPUT/inputDeviceDriver.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/INPUT/transformationEvent6D.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/INPUT/inputPlugin.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/INPUT/notificationEvent.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/INPUT/motionTrackingEvent.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/INPUT/buttonEvent.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/INPUT/deviceEvent.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/INPUT/fakeDriver.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/DATATYPE
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/DATATYPE/colorUnitHue.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/DATATYPE/colorHSV.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/DATATYPE/datatype.doc
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/DATATYPE/dataset.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/DATATYPE/colorRGBA.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/DATATYPE/colorUnit.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/DATATYPE/vertex2.iC
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/DATATYPE/vertex1.iC
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/DATATYPE/raytraceableGrid.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/DATATYPE/colorExtensions.iC
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/DATATYPE/colorRGBA.iC
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/DATATYPE/colorMap.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/DATATYPE/colorExtensions.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/DATATYPE/sources.cmake
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/DATATYPE/vertex1.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/DATATYPE/colorUnit.iC
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/DATATYPE/colorUnitHue.iC
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/DATATYPE/standardDatasets.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/DATATYPE/colorHSV.iC
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/DATATYPE/vertex2.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/RENDERING
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/RENDERING/vertexBuffer.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/RENDERING/glDisplayList.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/RENDERING/renderSetup.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/RENDERING/renderWindow.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/RENDERING/glDisplayList.iC
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/RENDERING/glOffscreenTarget.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/RENDERING/camera.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/RENDERING/glRenderWindow.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/RENDERING/pixelFormat.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/RENDERING/rendering.doc
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/RENDERING/RENDERERS
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/RENDERING/RENDERERS/POVRenderer.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/RENDERING/RENDERERS/cudaVolumeRenderer.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/RENDERING/RENDERERS/renderer.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/RENDERING/RENDERERS/glRenderer.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/RENDERING/RENDERERS/glRenderer.iC
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/RENDERING/RENDERERS/XML3DRenderer.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/RENDERING/RENDERERS/bufferedRenderer.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/RENDERING/RENDERERS/rtfactRenderer.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/RENDERING/RENDERERS/STLRenderer.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/RENDERING/RENDERERS/VRMLRenderer.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/RENDERING/RENDERERS/tilingRenderer.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/RENDERING/RENDERERS/raytracingRenderer.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/RENDERING/renderTarget.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/MODELS
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/MODELS/HBondModel.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/MODELS/models.doc
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/MODELS/atomBondModelBaseProcessor.iC
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/MODELS/colorProcessor.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/MODELS/surfaceModel.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/MODELS/lineModel.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/MODELS/standardColorProcessor.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/MODELS/fieldLineCreator.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/MODELS/forceModel.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/MODELS/backboneModel.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/MODELS/colorByGridProcessor.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/MODELS/atomBondModelBaseProcessor.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/MODELS/ballAndStickModel.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/MODELS/modelProcessor.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/MODELS/labelModel.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/MODELS/vanDerWaalsModel.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/MODELS/standardColorProcessor.iC
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/MODELS/cartoonModel.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/MODELS/ballAndStickModel.iC
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/KERNEL
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/KERNEL/connectionObject.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/KERNEL/connectionObject.iC
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/KERNEL/message.iC
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/KERNEL/representation.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/KERNEL/iconLoader.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/KERNEL/shortcutRegistry.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/KERNEL/UIOperationMode.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/KERNEL/stage.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/KERNEL/editOperation.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/KERNEL/mainControl.iC
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/KERNEL/threads.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/KERNEL/compositeManager.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/KERNEL/representationManager.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/KERNEL/serverWidget.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/KERNEL/snapshotManagerInterface.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/KERNEL/preferencesEntry.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/KERNEL/kernel.doc
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/KERNEL/serverWidget.iC
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/KERNEL/message.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/KERNEL/clippingPlane.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/KERNEL/geometricObject.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/KERNEL/sources.cmake
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/KERNEL/modularWidget.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/KERNEL/modelInformation.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/KERNEL/representation.iC
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/KERNEL/mainControl.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/KERNEL/common.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/KERNEL/MODES
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/KERNEL/MODES/moveMode.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/KERNEL/MODES/editMode.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/KERNEL/MODES/rotateMode.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/KERNEL/MODES/interactionModeManager.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/KERNEL/MODES/interactionMode.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/KERNEL/MODES/sources.cmake
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/KERNEL/MODES/pickingMode.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/PLUGIN
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/PLUGIN/inputDevPluginHandler.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/PLUGIN/modularWidgetPlugin.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/PLUGIN/VIEWPlugin.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/PLUGIN/modularWidgetPluginHandler.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/sources.cmake
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/PRIMITIVES
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/PRIMITIVES/box.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/PRIMITIVES/gridVisualisation.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/PRIMITIVES/twoColoredLine.iC
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/PRIMITIVES/quadMesh.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/PRIMITIVES/point.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/PRIMITIVES/label.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/PRIMITIVES/tube.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/PRIMITIVES/disc.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/PRIMITIVES/twoColoredTube.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/PRIMITIVES/primitives.doc
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/PRIMITIVES/sphere.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/PRIMITIVES/mesh.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/PRIMITIVES/multiLine.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/PRIMITIVES/line.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/PRIMITIVES/twoColoredTube.iC
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/PRIMITIVES/simpleBox.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/VIEW/PRIMITIVES/twoColoredLine.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/XRAY
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/XRAY/xray.doc
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/XRAY/crystalGenerator.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/XRAY/spaceGroupParameters.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/XRAY/crystalInfo.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/XRAY/sources.cmake
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/STRUCTURE
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/STRUCTURE/hybridisationProcessor.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/STRUCTURE/RDFSection.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/STRUCTURE/atomTyper.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/STRUCTURE/reconstructFragmentProcessor.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/STRUCTURE/structure.doc
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/STRUCTURE/geometricTransformations.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/STRUCTURE/triangleEdge.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/STRUCTURE/reducedSurface.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/STRUCTURE/secondaryStructureProcessor.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/STRUCTURE/triangle.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/STRUCTURE/connectedComponentsProcessor.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/STRUCTURE/binaryFingerprintMethods.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/STRUCTURE/RDFIntegrator.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/STRUCTURE/molecularSimilarity.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/STRUCTURE/fragmentDB.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/STRUCTURE/addHydrogenProcessor.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/STRUCTURE/surfaceProcessor.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/STRUCTURE/RDFParameter.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/STRUCTURE/numericalSAS.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/STRUCTURE/residueChecker.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/STRUCTURE/mutator.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/STRUCTURE/rotamerLibrary.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/STRUCTURE/nucleotideMapping.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/STRUCTURE/solventAccessibleSurface.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/STRUCTURE/structureMapper.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/STRUCTURE/solventExcludedSurface.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/STRUCTURE/trianglePoint.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/STRUCTURE/SESFace.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/STRUCTURE/peptideBuilder.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/STRUCTURE/triangulatedSES.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/STRUCTURE/smartsParser.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/STRUCTURE/peptides.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/STRUCTURE/kekulizer.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/STRUCTURE/SASFace.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/STRUCTURE/graphFace.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/STRUCTURE/disulfidBondProcessor.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/STRUCTURE/RSFace.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/STRUCTURE/graphEdge.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/STRUCTURE/atomBijection.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/STRUCTURE/UCK.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/STRUCTURE/sideChainPlacementProcessor.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/STRUCTURE/rGroupAssembler.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/STRUCTURE/HBondProcessor.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/STRUCTURE/sdGenerator.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/STRUCTURE/BONDORDERS
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/STRUCTURE/BONDORDERS/branchAndBoundBondOrderStrategy.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/STRUCTURE/BONDORDERS/bondOrderAssignment.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/STRUCTURE/BONDORDERS/bondOrderAssignmentStrategy.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/STRUCTURE/BONDORDERS/AStarBondOrderStrategy.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/STRUCTURE/BONDORDERS/KGreedyBondOrderStrategy.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/STRUCTURE/BONDORDERS/partialBondOrderAssignment.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/STRUCTURE/BONDORDERS/sources.cmake
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/STRUCTURE/BONDORDERS/FPTBondOrderStrategy.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/STRUCTURE/BONDORDERS/ILPBondOrderStrategy.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/STRUCTURE/SESEdge.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/STRUCTURE/peptideCapProcessor.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/STRUCTURE/residueRotamerSet.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/STRUCTURE/smilesParser.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/STRUCTURE/RSEdge.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/STRUCTURE/smartsMatcher.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/STRUCTURE/bindingPocketProcessor.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/STRUCTURE/geometricProperties.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/STRUCTURE/graphVertex.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/STRUCTURE/analyticalSES.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/STRUCTURE/triangulatedSAS.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/STRUCTURE/sources.cmake
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/STRUCTURE/ringAnalyser.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/STRUCTURE/RMSDMinimizer.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/STRUCTURE/triangulatedSurface.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/STRUCTURE/radialDistributionFunction.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/STRUCTURE/DNAMutator.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/STRUCTURE/simpleMolecularGraph.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/STRUCTURE/defaultProcessors.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/STRUCTURE/SESVertex.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/STRUCTURE/logP.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/STRUCTURE/RSVertex.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/STRUCTURE/SASVertex.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/STRUCTURE/assignBondOrderProcessor.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/STRUCTURE/SASEdge.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/STRUCTURE/buildBondsProcessor.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/common.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/CONFIG/config.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/include/BALL/PYTHON/BALLPythonConfig.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/doc/BALL/EXAMPLES
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/doc/BALL/EXAMPLES/addHydrogens.C
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/doc/BALL/EXAMPLES/energy.C
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/doc/BALL/EXAMPLES/bindingEnergy.C
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/doc/BALL/EXAMPLES/PDB2discover.C
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/doc/BALL/EXAMPLES/TUTORIAL
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/doc/BALL/EXAMPLES/TUTORIAL/bounding_box.C
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/doc/BALL/EXAMPLES/TUTORIAL/glBoundingBoxModel.h
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/doc/BALL/EXAMPLES/TUTORIAL/pdb4pti.ent
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/doc/BALL/EXAMPLES/TUTORIAL/tutorial3.C
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/doc/BALL/EXAMPLES/TUTORIAL/bounding_box_example.hin
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/doc/BALL/EXAMPLES/TUTORIAL/tutorial1.C
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/doc/BALL/EXAMPLES/TUTORIAL/tutorial2.C
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/doc/BALL/EXAMPLES/TUTORIAL/bpti.pdb
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/doc/BALL/EXAMPLES/TUTORIAL/string_tutorial.C
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/doc/BALL/EXAMPLES/PYTHON
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/doc/BALL/EXAMPLES/PYTHON/BALLView
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/doc/BALL/EXAMPLES/PYTHON/BALLView/opengl_benchmark.py
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/doc/BALL/EXAMPLES/PYTHON/BALLView/selectNeighbourAtoms.py
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/doc/BALL/EXAMPLES/PYTHON/BALLView/compareAtoms.py
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/doc/BALL/EXAMPLES/PYTHON/BALLView/selectNeighbourResidues.py
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/doc/BALL/EXAMPLES/PYTHON/BALLView/cartoon_test.py
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/doc/BALL/EXAMPLES/PYTHON/BALLView/movie_script.py
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/doc/BALL/EXAMPLES/PYTHON/BALLView/povray_movie.py
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/doc/BALL/EXAMPLES/PYTHON/BALLView/minimizerTest.py
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/doc/BALL/EXAMPLES/PYTHON/BALLView/amberEnergy_BV.py
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/doc/BALL/EXAMPLES/PYTHON/BALLView/stereoImage.py
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/doc/BALL/EXAMPLES/PYTHON/BALLView/add_hydrogens_BV.py
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/doc/BALL/EXAMPLES/PYTHON/BALLView/cartoon_test2.py
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/doc/BALL/EXAMPLES/PYTHON/BALLView/visualiseAtomMobility.py
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/doc/BALL/EXAMPLES/PYTHON/BALLView/model.py
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/doc/BALL/EXAMPLES/PYTHON/BALLView/stereo_demo.py
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/doc/BALL/EXAMPLES/PYTHON/BALLView/movie_script3.py
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/doc/BALL/EXAMPLES/PYTHON/BALLView/hin2mol2_BV.py
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/doc/BALL/EXAMPLES/PYTHON/BALLView/tempfactor.py
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/doc/BALL/EXAMPLES/PYTHON/BALLView/movie_script4.py
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/doc/BALL/EXAMPLES/PYTHON/BALLView/energy_BV.py
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/doc/BALL/EXAMPLES/PYTHON/BALLView/es_movie.py
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/doc/BALL/EXAMPLES/PYTHON/BALLView/simulated_annealing.py
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/doc/BALL/EXAMPLES/PYTHON/BALLView/visualiseTrajectory.py
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/doc/BALL/EXAMPLES/PYTHON/BALLView/bindingEnergy_BV.py
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/doc/BALL/EXAMPLES/PYTHON/BALLView/graphics_benchmark.py
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/doc/BALL/EXAMPLES/PYTHON/BALLView/movie_script2.py
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/doc/BALL/EXAMPLES/PYTHON/UTILITIES
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/doc/BALL/EXAMPLES/PYTHON/UTILITIES/assignBondOrders.py
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/doc/BALL/EXAMPLES/PYTHON/UTILITIES/mopac.py
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/doc/BALL/EXAMPLES/PYTHON/UTILITIES/density_image.py
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/doc/BALL/EXAMPLES/PYTHON/UTILITIES/load_PDB.py
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/doc/BALL/EXAMPLES/PYTHON/UTILITIES/new_atom.py
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/doc/BALL/EXAMPLES/PYTHON/UTILITIES/PDBChecker.py
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/doc/BALL/EXAMPLES/PYTHON/UTILITIES/energy.py
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/doc/BALL/EXAMPLES/PYTHON/UTILITIES/new_representation.py
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/doc/BALL/EXAMPLES/PYTHON/UTILITIES/hin2mol2.py
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/doc/BALL/EXAMPLES/PYTHON/UTILITIES/amberEnergy.py
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/doc/BALL/EXAMPLES/PYTHON/UTILITIES/create_bonds.py
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/doc/BALL/EXAMPLES/PYTHON/UTILITIES/bindingEnergy.py
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/doc/BALL/EXAMPLES/PYTHON/UTILITIES/add_hydrogens.py
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/doc/BALL/EXAMPLES/PYTHON/UTILITIES/print_forces.py
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/doc/BALL/EXAMPLES/PYTHON/UTILITIES/minimization.py
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/doc/BALL/EXAMPLES/PYTHON/UTILITIES/export_scene.py
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/doc/BALL/EXAMPLES/PYTHON/UTILITIES/write_PDB.py
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/doc/BALL/EXAMPLES/PYTHON/howtos
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/doc/BALL/EXAMPLES/PYTHON/howtos/assignNMRShifts.py
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/doc/BALL/EXAMPLES/PYTHON/howtos/add_hydrogens.py
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/doc/BALL/EXAMPLES/PDBChecker.C
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/doc/BALL/EXAMPLES/assign_chemical_shifts.C
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/doc/BALL/EXAMPLES/ramachandran.C
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/doc/BALL/EXAMPLES/EXAMPLES.txt
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/doc/BALL/EXAMPLES/amberEnergy.C
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/doc/BALL/EXAMPLES/SASAreas.C
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/doc/BALL/EXAMPLES/create_random_numbers.C
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/doc/BALL/html
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/doc/BALL/html/dir_3f369278b07109369b05d5a815b63ef8.html
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-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/doc/BALL/html/de/dec/a05914.html
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-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/doc/BALL/html/de/dec/a07758.html
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-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/doc/BALL/html/functions_eval_l.html
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/doc/BALL/html/functions_func_n.html
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/doc/BALL/html/functions_func_p.html
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-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/doc/BALL/html/functions_type_d.html
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/doc/BALL/html/form_74.png
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/doc/BALL/html/functions_vars_m.html
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/doc/BALL/html/globals_h.html
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-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/doc/BALL/html/globals_defs_b.html
-- Installing: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/share/doc/BALL/TUTORIAL/tutorial.pdf
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/lib/cmake/BALL/BALLConfig.cmake
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/lib/cmake/BALL/BALLConfigVersion.cmake
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/lib/cmake/BALL/BALLExport.cmake
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/lib/cmake/BALL/BALLExport-release.cmake
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/lib/pluginPresentaBALL.so
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/lib/pluginBALLaxy.so
-- Up-to-date: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/usr/bin/BALLView
make[2]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make[1]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c'
   debian/rules override_dh_auto_test
make[1]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c'
dh_auto_test --no-parallel -- || true
	cd build && make -j1 test ARGS\+=-j1
make[2]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
Running tests...
/usr/bin/ctest --force-new-ctest-process -j1
Test project /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build
        Start   1: Socket_test
  1/293 Test   #1: Socket_test ..................................   Passed    0.44 sec
        Start   2: ClassTest_test
  2/293 Test   #2: ClassTest_test ...............................   Passed    0.01 sec
        Start   3: Debug_test
  3/293 Test   #3: Debug_test ...................................   Passed    0.01 sec
        Start   4: RegularExpression_test
  4/293 Test   #4: RegularExpression_test .......................   Passed    0.01 sec
        Start   5: GlobalTypes_test
  5/293 Test   #5: GlobalTypes_test .............................   Passed    0.01 sec
        Start   6: VersionInfo_test
  6/293 Test   #6: VersionInfo_test .............................   Passed    0.01 sec
        Start   7: RTTI_test
  7/293 Test   #7: RTTI_test ....................................   Passed    0.01 sec
        Start   8: MathsCommon_test
  8/293 Test   #8: MathsCommon_test .............................   Passed    0.01 sec
        Start   9: AnalyticalGeometry_test
  9/293 Test   #9: AnalyticalGeometry_test ......................   Passed    0.01 sec
        Start  10: Angle_test
 10/293 Test  #10: Angle_test ...................................   Passed    0.01 sec
        Start  11: Vector2_test
 11/293 Test  #11: Vector2_test .................................   Passed    0.01 sec
        Start  12: Vector3_test
 12/293 Test  #12: Vector3_test .................................   Passed    0.01 sec
        Start  13: Vector4_test
 13/293 Test  #13: Vector4_test .................................   Passed    0.01 sec
        Start  14: Quaternion_test
 14/293 Test  #14: Quaternion_test ..............................   Passed    0.01 sec
        Start  15: Matrix44_test1
 15/293 Test  #15: Matrix44_test1 ...............................   Passed    0.01 sec
        Start  16: Matrix44_test2
 16/293 Test  #16: Matrix44_test2 ...............................   Passed    0.01 sec
        Start  17: NumericalIntegrator_test
 17/293 Test  #17: NumericalIntegrator_test .....................   Passed    0.01 sec
        Start  18: Line3_test
 18/293 Test  #18: Line3_test ...................................   Passed    0.01 sec
        Start  19: Circle3_test
 19/293 Test  #19: Circle3_test .................................   Passed    0.01 sec
        Start  20: SimpleBox3_test
 20/293 Test  #20: SimpleBox3_test ..............................   Passed    0.01 sec
        Start  21: Box3_test
 21/293 Test  #21: Box3_test ....................................   Passed    0.01 sec
        Start  22: Plane3_test
 22/293 Test  #22: Plane3_test ..................................   Passed    0.01 sec
        Start  23: Sphere3_test
 23/293 Test  #23: Sphere3_test .................................   Passed    0.01 sec
        Start  24: Surface_test
 24/293 Test  #24: Surface_test .................................   Passed    0.01 sec
        Start  25: Function_test
 25/293 Test  #25: Function_test ................................***Failed    0.01 sec
Version: 1.5.0
checking MutableConstant::MutableConstant()... passed
checking MutableConstant::~MutableConstant()... passed
checking MutableConstant::MutableConstant(DataType constant)... passed
checking MutableConstant::MutableConstant(const MutableConstant& constant)... passed
checking MutableConstant::operator = (const MutableConstant& constant)... passed
checking MutableConstant::operator == (const MutableConstant& constant)... passed
checking MutableConstant::operator () ()... passed
checking MutableConstant::setConstant()... passed
checking MutableConstant::getConstant()... passed
checking Addition() throw()... passed
checking ~Addition() throw()... passed
checking Addition(const Addition& add) throw()... passed
checking Addition operator = (const Addition& add) throw()... passed
checking bool operator == (const Addition& add) throw()... passed
checking operator () ()... passed
checking getFirst()... passed
checking setFirst()... passed
checking getSecond()... passed
checking setSecond()... passed
checking Subtraction::Subtraction()... passed
checking Subtraction::~Subtraction()... passed
checking Subtraction::Subtraction(const Subtraction& sub)... passed
checking Subtraction::operator = (const Subtraction& sub)... passed
checking Subtraction::operator == (const Subtraction& sub)... passed
checking Subtraction::operator () ()... passed
checking Subtraction::getFirst()... passed
checking Subtraction::setFirst()... passed
checking Subtraction::getSecond()... passed
checking Subtraction::setSecond()... passed
checking Product::Product()... passed
checking Product::~Product()... passed
checking Product::Product(const Product& prod)... passed
checking Product::operator = (const Product& prod)... passed
checking Product::operator == (const Product& prod)... passed
checking Product::operator () ()... passed
checking Product::getFirst()... passed
checking Product::setFirst()... passed
checking Product::getSecond()... passed
checking Product::setSecond()... passed
checking Division::Division()... passed
checking Division::~Division()... passed
checking Division::Division(const Division& div)... passed
checking Division::operator = (const Division& div)... passed
checking Division::operator == (const Division& div)... passed
checking Division::operator () ()... passed
checking Division::getFirst()... passed
checking Division::setFirst()... passed
checking Division::getSecond()... passed
checking Division::setSecond()... passed
checking Reciprocal::Reciprocal()... passed
checking Reciprocal::~Reciprocal()... passed
checking Reciprocal::Reciprocal(const rec)... passed
checking Reciprocal::operator = (const Reciprocal& rec)... passed
checking Reciprocal::operator == (const Reciprocal& rec)... passed
checking Reciprocal::operator () (DataType x)... passed
checking Reciprocal::setFunction(const Function& function)... passed
checking Reciprocal::getFunction()... passed
checking SquareFunction::SquareFunction()... passed
checking SquareFunction::~SquareFunction()... passed
checking SquareFunction::SquareFunction(const sq)... passed
checking SquareFunction::operator = (const SquareFunction& sq)... passed
checking SquareFunction::operator == (const SquareFunction& sq)... passed
checking SquareFunction::operator () (DataType x)... 
    (line 547 TEST_REAL_EQUAL(sq1.operator() (13), 22193521): got 2.21935e+07, expected 22193521)  - 
    FAILED
checking SquareFunction::setFunction(const Function& function)... passed
checking SquareFunction::getFunction()... passed
checking CubicFunction::CubicFunction()... passed
checking CubicFunction::~CubicFunction()... passed
checking CubicFunction::CubicFunction(const cu)... passed
checking CubicFunction::operator = (const CubicFunction& cu)... passed
checking CubicFunction::operator == (const CubicFunction& cu)... passed
checking CubicFunction::operator () (DataType x)... passed
checking CubicFunction::setFunction(const Function& function)... passed
checking CubicFunction::getFunction()... passed
checking MutablePower::MutablePower()... passed
checking MutablePower::~MutablePower()... passed
checking MutablePower::MutablePower(const MutablePower& mp)... passed
checking MutablePower::operator = (const MutablePower& mp)... passed
checking MutablePower::operator == (const MutablePower& mp)... passed
checking MutablePower::operator () (DataType x)... passed
checking MutablePower::setFunction(const Function& function)... passed
checking MutablePower::getFunction()... passed
FAILED

        Start  26: PiecewiseFunction_test
 26/293 Test  #26: PiecewiseFunction_test .......................   Passed    0.01 sec
        Start  27: PiecewisePolynomial_test
 27/293 Test  #27: PiecewisePolynomial_test .....................   Passed    0.01 sec
        Start  28: Directory_test
 28/293 Test  #28: Directory_test ...............................   Passed    0.03 sec
        Start  29: FileSystem_test
 29/293 Test  #29: FileSystem_test ..............................   Passed    0.01 sec
        Start  30: File_test1
 30/293 Test  #30: File_test1 ...................................   Passed    0.02 sec
        Start  31: File_test2
 31/293 Test  #31: File_test2 ...................................   Passed    0.01 sec
        Start  32: Path_test
 32/293 Test  #32: Path_test ....................................   Passed    0.01 sec
        Start  33: PreciseTime_test
 33/293 Test  #33: PreciseTime_test .............................   Passed    0.01 sec
        Start  34: Sysinfo_test
 34/293 Test  #34: Sysinfo_test .................................   Passed    0.01 sec
        Start  35: Timer_test
 35/293 Test  #35: Timer_test ...................................   Passed    6.19 sec
        Start  36: TimeStamp_test
 36/293 Test  #36: TimeStamp_test ...............................   Passed    0.17 sec
        Start  37: TransformationManager_test
 37/293 Test  #37: TransformationManager_test ...................   Passed    0.01 sec
        Start  38: Bit_test
 38/293 Test  #38: Bit_test .....................................   Passed    0.01 sec
        Start  39: BitVector_test1
 39/293 Test  #39: BitVector_test1 ..............................   Passed    0.01 sec
        Start  40: BitVector_test2
 40/293 Test  #40: BitVector_test2 ..............................   Passed    0.01 sec
        Start  41: Contour_test
 41/293 Test  #41: Contour_test .................................   Passed    0.01 sec
        Start  42: ContourLine_test
 42/293 Test  #42: ContourLine_test .............................   Passed    0.01 sec
        Start  43: Hash_test
 43/293 Test  #43: Hash_test ....................................   Passed    0.01 sec
        Start  44: HashMap_test
 44/293 Test  #44: HashMap_test .................................   Passed    0.01 sec
        Start  45: StringHashMap_test
 45/293 Test  #45: StringHashMap_test ...........................   Passed    0.02 sec
        Start  46: HashSet_test1
 46/293 Test  #46: HashSet_test1 ................................   Passed    0.01 sec
        Start  47: HashSet_test2
 47/293 Test  #47: HashSet_test2 ................................   Passed    0.01 sec
        Start  48: HashGrid3_test
 48/293 Test  #48: HashGrid3_test ...............................   Passed    0.15 sec
        Start  49: HashGridBox3_test
 49/293 Test  #49: HashGridBox3_test ............................   Passed    0.01 sec
        Start  50: HashGrid3DataIteratorTraits_test
 50/293 Test  #50: HashGrid3DataIteratorTraits_test .............   Passed    0.01 sec
        Start  51: HashGrid3BoxIteratorTraits_test
 51/293 Test  #51: HashGrid3BoxIteratorTraits_test ..............   Passed    0.01 sec
        Start  52: HashGrid3DataItem_test
 52/293 Test  #52: HashGrid3DataItem_test .......................   Passed    0.01 sec
        Start  53: HashGrid3NeighborBoxItem_test
 53/293 Test  #53: HashGrid3NeighborBoxItem_test ................   Passed    0.01 sec
        Start  54: Options_test
 54/293 Test  #54: Options_test .................................   Passed    0.01 sec
        Start  55: String_test1
 55/293 Test  #55: String_test1 .................................   Passed    0.01 sec
        Start  56: String_test2
 56/293 Test  #56: String_test2 .................................   Passed    0.01 sec
        Start  57: String_test3
 57/293 Test  #57: String_test3 .................................   Passed    0.01 sec
        Start  58: String_test4
 58/293 Test  #58: String_test4 .................................   Passed    0.01 sec
        Start  59: String_test5
 59/293 Test  #59: String_test5 .................................   Passed    0.01 sec
        Start  60: String_test6
 60/293 Test  #60: String_test6 .................................   Passed    0.01 sec
        Start  61: String_test7
 61/293 Test  #61: String_test7 .................................   Passed    0.01 sec
        Start  62: String_test8
 62/293 Test  #62: String_test8 .................................   Passed    0.01 sec
        Start  63: Substring_test
 63/293 Test  #63: Substring_test ...............................   Passed    0.01 sec
        Start  64: Triple_test
 64/293 Test  #64: Triple_test ..................................   Passed    0.01 sec
        Start  65: Quadruple_test
 65/293 Test  #65: Quadruple_test ...............................   Passed    0.01 sec
        Start  66: RegularData1D_test1
 66/293 Test  #66: RegularData1D_test1 ..........................   Passed    0.01 sec
        Start  67: RegularData1D_test2
 67/293 Test  #67: RegularData1D_test2 ..........................   Passed    0.01 sec
        Start  68: RegularData2D_test1
 68/293 Test  #68: RegularData2D_test1 ..........................   Passed    0.01 sec
        Start  69: RegularData2D_test2
 69/293 Test  #69: RegularData2D_test2 ..........................   Passed    0.01 sec
        Start  70: RegularData3D_test1
 70/293 Test  #70: RegularData3D_test1 ..........................   Passed    0.01 sec
        Start  71: RegularData3D_test2
 71/293 Test  #71: RegularData3D_test2 ..........................   Passed    0.01 sec
        Start  72: ContourSurface_test
 72/293 Test  #72: ContourSurface_test ..........................   Passed    0.01 sec
        Start  73: LogStream_test
 73/293 Test  #73: LogStream_test ...............................   Passed    0.16 sec
        Start  74: AutoDeletable_test
 74/293 Test  #74: AutoDeletable_test ...........................   Passed    0.01 sec
        Start  75: Factory_test
 75/293 Test  #75: Factory_test .................................   Passed    0.01 sec
        Start  76: Object_test
 76/293 Test  #76: Object_test ..................................   Passed    0.01 sec
        Start  77: PersistentObject_test
 77/293 Test  #77: PersistentObject_test ........................   Passed    0.01 sec
        Start  78: PersistenceManager_test
 78/293 Test  #78: PersistenceManager_test ......................   Passed    0.01 sec
        Start  79: TextPersistenceManager_test
 79/293 Test  #79: TextPersistenceManager_test ..................   Passed    0.12 sec
        Start  80: Selectable_test
 80/293 Test  #80: Selectable_test ..............................   Passed    0.01 sec
        Start  81: NamedProperty_test
 81/293 Test  #81: NamedProperty_test ...........................   Passed    0.01 sec
        Start  82: PropertyManager_test
 82/293 Test  #82: PropertyManager_test .........................   Passed    0.01 sec
        Start  83: Composite_test1
 83/293 Test  #83: Composite_test1 ..............................   Passed    0.01 sec
        Start  84: Composite_test2
 84/293 Test  #84: Composite_test2 ..............................   Passed    0.01 sec
        Start  85: Composite_test3
 85/293 Test  #85: Composite_test3 ..............................   Passed    0.01 sec
        Start  86: Composite_test4
 86/293 Test  #86: Composite_test4 ..............................   Passed    0.08 sec
        Start  87: Composite_test5
 87/293 Test  #87: Composite_test5 ..............................   Passed    0.01 sec
        Start  88: Composite_test6
 88/293 Test  #88: Composite_test6 ..............................   Passed    0.01 sec
        Start  89: CompositeCompositeIteratorTraits_test
 89/293 Test  #89: CompositeCompositeIteratorTraits_test ........   Passed    0.01 sec
        Start  90: CompositeChildcompositeIteratorTraits_test
 90/293 Test  #90: CompositeChildcompositeIteratorTraits_test ...   Passed    0.01 sec
        Start  91: CompositeAncestorIteratorTraits_test
 91/293 Test  #91: CompositeAncestorIteratorTraits_test .........   Passed    0.01 sec
        Start  92: Embeddable_test
 92/293 Test  #92: Embeddable_test ..............................   Passed    0.01 sec
        Start  93: BaseIterator_test
 93/293 Test  #93: BaseIterator_test ............................   Passed    0.01 sec
        Start  94: ConstForwardIterator_test
 94/293 Test  #94: ConstForwardIterator_test ....................   Passed    0.01 sec
        Start  95: ForwardIterator_test
 95/293 Test  #95: ForwardIterator_test .........................   Passed    0.01 sec
        Start  96: ConstBidirectionalIterator_test
 96/293 Test  #96: ConstBidirectionalIterator_test ..............   Passed    0.01 sec
        Start  97: BidirectionalIterator_test
 97/293 Test  #97: BidirectionalIterator_test ...................   Passed    0.01 sec
        Start  98: ConstRandomAccessIterator_test
 98/293 Test  #98: ConstRandomAccessIterator_test ...............   Passed    0.01 sec
        Start  99: RandomAccessIterator_test
 99/293 Test  #99: RandomAccessIterator_test ....................   Passed    0.01 sec
        Start 100: ConformationSet_test
100/293 Test #100: ConformationSet_test .........................   Passed    0.05 sec
        Start 101: DockResult_test
101/293 Test #101: DockResult_test ..............................   Passed    0.01 sec
        Start 102: PoseClustering_test1
102/293 Test #102: PoseClustering_test1 .........................   Passed    0.42 sec
        Start 103: PoseClustering_test2
103/293 Test #103: PoseClustering_test2 .........................   Passed    0.43 sec
        Start 104: PoseClustering_test3
104/293 Test #104: PoseClustering_test3 .........................   Passed    0.10 sec
        Start 105: ScoringFunction_test
105/293 Test #105: ScoringFunction_test .........................   Passed   47.69 sec
        Start 106: PTE_test
106/293 Test #106: PTE_test .....................................   Passed    0.01 sec
        Start 107: Atom_test1
107/293 Test #107: Atom_test1 ...................................   Passed    0.01 sec
        Start 108: Atom_test2
108/293 Test #108: Atom_test2 ...................................   Passed    0.01 sec
        Start 109: Bond_test
109/293 Test #109: Bond_test ....................................   Passed    0.01 sec
        Start 110: AtomContainer_test1
110/293 Test #110: AtomContainer_test1 ..........................   Passed    0.01 sec
        Start 111: AtomContainer_test2
111/293 Test #111: AtomContainer_test2 ..........................   Passed    0.01 sec
        Start 112: Fragment_test
112/293 Test #112: Fragment_test ................................   Passed    0.01 sec
        Start 113: Chain_test
113/293 Test #113: Chain_test ...................................   Passed    0.01 sec
        Start 114: Molecule_test
114/293 Test #114: Molecule_test ................................   Passed    0.01 sec
        Start 115: SecondaryStructure_test
115/293 Test #115: SecondaryStructure_test ......................   Passed    0.01 sec
        Start 116: System_test
116/293 Test #116: System_test ..................................   Passed    0.01 sec
        Start 117: Protein_test
117/293 Test #117: Protein_test .................................   Passed    0.01 sec
        Start 118: PDBAtom_test
118/293 Test #118: PDBAtom_test .................................   Passed    0.01 sec
        Start 119: NucleicAcid_test
119/293 Test #119: NucleicAcid_test .............................   Passed    0.01 sec
        Start 120: Nucleotide_test
120/293 Test #120: Nucleotide_test ..............................   Passed    0.01 sec
        Start 121: Residue_test1
121/293 Test #121: Residue_test1 ................................   Passed    0.01 sec
        Start 122: Residue_test2
122/293 Test #122: Residue_test2 ................................   Passed    0.01 sec
        Start 123: Expression_test
123/293 Test #123: Expression_test ..............................   Passed    0.01 sec
        Start 124: ExpressionParser_test
124/293 Test #124: ExpressionParser_test ........................   Passed    0.01 sec
        Start 125: ExpressionPredicate_test
125/293 Test #125: ExpressionPredicate_test .....................   Passed    0.01 sec
        Start 126: ExpressionTree_test
126/293 Test #126: ExpressionTree_test ..........................   Passed    0.01 sec
        Start 127: KernelPredicate_test
127/293 Test #127: KernelPredicate_test .........................   Passed    0.01 sec
        Start 128: Selector_test
128/293 Test #128: Selector_test ................................   Passed    0.01 sec
        Start 129: RuleEvaluator_test
129/293 Test #129: RuleEvaluator_test ...........................   Passed    0.01 sec
        Start 130: StandardPredicates_test1
130/293 Test #130: StandardPredicates_test1 .....................   Passed    0.01 sec
        Start 131: StandardPredicates_test2
131/293 Test #131: StandardPredicates_test2 .....................   Passed    0.01 sec
        Start 132: StandardPredicates_test3
132/293 Test #132: StandardPredicates_test3 .....................   Passed    0.01 sec
        Start 133: StandardPredicates_test4
133/293 Test #133: StandardPredicates_test4 .....................   Passed    0.01 sec
        Start 134: DefaultProcessors_test
134/293 Test #134: DefaultProcessors_test .......................   Passed    0.01 sec
        Start 135: FragmentDB_test
135/293 Test #135: FragmentDB_test ..............................   Passed    0.08 sec
        Start 136: NormalizeNamesProcessor_test
136/293 Test #136: NormalizeNamesProcessor_test .................   Passed    0.04 sec
        Start 137: ForEach_test
137/293 Test #137: ForEach_test .................................   Passed    0.01 sec
        Start 138: GlobalKernel_test
138/293 Test #138: GlobalKernel_test ............................   Passed    0.01 sec
        Start 139: CompositeIteratorTraits_test
139/293 Test #139: CompositeIteratorTraits_test .................   Passed    0.01 sec
        Start 140: AtomIterator_test
140/293 Test #140: AtomIterator_test ............................   Passed    0.01 sec
        Start 141: AtomBondIteratorTraits_test
141/293 Test #141: AtomBondIteratorTraits_test ..................   Passed    0.01 sec
        Start 142: Extractors_test
142/293 Test #142: Extractors_test ..............................   Passed    0.01 sec
        Start 143: StdIteratorWrapper_test
143/293 Test #143: StdIteratorWrapper_test ......................   Passed    0.02 sec
        Start 144: Gradient_test
144/293 Test #144: Gradient_test ................................   Passed    0.01 sec
        Start 145: AtomVector_test
145/293 Test #145: AtomVector_test ..............................   Passed    0.01 sec
        Start 146: MolmecSupport_test
146/293 Test #146: MolmecSupport_test ...........................   Passed    0.04 sec
        Start 147: SnapShot_test
147/293 Test #147: SnapShot_test ................................   Passed    0.01 sec
        Start 148: SnapShotManager_test
148/293 Test #148: SnapShotManager_test .........................   Passed    0.02 sec
        Start 149: ForceField_test
149/293 Test #149: ForceField_test ..............................   Passed    0.01 sec
        Start 150: AmberFF_test
150/293 Test #150: AmberFF_test .................................   Passed    0.33 sec
        Start 151: MMFF94_test
151/293 Test #151: MMFF94_test ..................................   Passed    0.07 sec
        Start 152: CharmmFF_test1
152/293 Test #152: CharmmFF_test1 ...............................   Passed    0.12 sec
        Start 153: CharmmFF_test2
153/293 Test #153: CharmmFF_test2 ...............................   Passed    0.11 sec
        Start 154: EnergyMinimizer_test
154/293 Test #154: EnergyMinimizer_test .........................   Passed    0.02 sec
        Start 155: LineSearch_test
155/293 Test #155: LineSearch_test ..............................   Passed    0.01 sec
        Start 156: SteepestDescentMinimizer_test
156/293 Test #156: SteepestDescentMinimizer_test ................   Passed    0.04 sec
        Start 157: ConjugateGradientMinimizer_test
157/293 Test #157: ConjugateGradientMinimizer_test ..............   Passed    0.53 sec
        Start 158: StrangLBFGSMinimizer_test
158/293 Test #158: StrangLBFGSMinimizer_test ....................   Passed    0.18 sec
        Start 159: ShiftedLVMMMinimizer_test1
159/293 Test #159: ShiftedLVMMMinimizer_test1 ...................   Passed    0.28 sec
        Start 160: ShiftedLVMMMinimizer_test2
160/293 Test #160: ShiftedLVMMMinimizer_test2 ...................   Passed    0.44 sec
        Start 161: ShiftedLVMMMinimizer_test3
161/293 Test #161: ShiftedLVMMMinimizer_test3 ...................   Passed    0.08 sec
        Start 162: AtomTypes_test
162/293 Test #162: AtomTypes_test ...............................   Passed    0.01 sec
        Start 163: HBondProcessor_test
163/293 Test #163: HBondProcessor_test ..........................   Passed    0.59 sec
        Start 164: RandomCoilShiftProcessor_test
164/293 Test #164: RandomCoilShiftProcessor_test ................   Passed    0.01 sec
        Start 165: AnisotropyShiftProcessor_test
165/293 Test #165: AnisotropyShiftProcessor_test ................   Passed    0.01 sec
        Start 166: ClearShiftProcessor_test
166/293 Test #166: ClearShiftProcessor_test .....................   Passed    0.01 sec
        Start 167: CreateSpectrumProcessor_test
167/293 Test #167: CreateSpectrumProcessor_test .................   Passed    0.02 sec
        Start 168: EFShiftProcessor_test
168/293 Test #168: EFShiftProcessor_test ........................   Passed    0.01 sec
        Start 169: HaighMallionShiftProcessor_test
169/293 Test #169: HaighMallionShiftProcessor_test ..............   Passed    0.05 sec
        Start 170: JohnsonBoveyShiftProcessor_test
170/293 Test #170: JohnsonBoveyShiftProcessor_test ..............   Passed    0.02 sec
        Start 171: ShiftModel_test
171/293 Test #171: ShiftModel_test ..............................   Passed    0.13 sec
        Start 172: ShiftModule_test
172/293 Test #172: ShiftModule_test .............................   Passed    0.01 sec
        Start 173: Peak_test
173/293 Test #173: Peak_test ....................................   Passed    0.01 sec
        Start 174: PeakList_test
174/293 Test #174: PeakList_test ................................   Passed    0.01 sec
        Start 175: Spectrum_test
175/293 Test #175: Spectrum_test ................................   Passed    0.01 sec
        Start 176: AmiraMeshFile_test
176/293 Test #176: AmiraMeshFile_test ...........................   Passed    0.10 sec
        Start 177: AntechamberFile_test
177/293 Test #177: AntechamberFile_test .........................   Passed    0.02 sec
        Start 178: LineBasedFile_test
178/293 Test #178: LineBasedFile_test ...........................   Passed    0.01 sec
        Start 179: BinaryFileAdaptor_test
179/293 Test #179: BinaryFileAdaptor_test .......................   Passed    0.01 sec
        Start 180: Bruker1DFile_test
180/293 Test #180: Bruker1DFile_test ............................   Passed    0.01 sec
        Start 181: Bruker2DFile_test
181/293 Test #181: Bruker2DFile_test ............................   Passed    0.01 sec
        Start 182: CCP4File_test
182/293 Test #182: CCP4File_test ................................   Passed    0.02 sec
        Start 183: DockResultFile_test
183/293 Test #183: DockResultFile_test ..........................   Passed    0.40 sec
        Start 184: HMOFile_test
184/293 Test #184: HMOFile_test .................................   Passed    0.04 sec
        Start 185: INIFile_test1
185/293 Test #185: INIFile_test1 ................................   Passed    0.02 sec
        Start 186: INIFile_test2
186/293 Test #186: INIFile_test2 ................................   Passed    0.02 sec
        Start 187: JCAMPFile_test
187/293 Test #187: JCAMPFile_test ...............................   Passed    0.01 sec
        Start 188: KCFFile_test
188/293 Test #188: KCFFile_test .................................   Passed    0.01 sec
        Start 189: Parameters_test
189/293 Test #189: Parameters_test ..............................   Passed    0.01 sec
        Start 190: ParameterSection_test
190/293 Test #190: ParameterSection_test ........................   Passed    0.01 sec
        Start 191: ResourceFile_test
191/293 Test #191: ResourceFile_test ............................   Passed    0.01 sec
        Start 192: GenericMolFile_test
192/293 Test #192: GenericMolFile_test ..........................   Passed    0.01 sec
        Start 193: HINFile_test
193/293 Test #193: HINFile_test .................................   Passed    0.22 sec
        Start 194: MOLFile_test
194/293 Test #194: MOLFile_test .................................   Passed    0.01 sec
        Start 195: SDFile_test
195/293 Test #195: SDFile_test ..................................   Passed    0.05 sec
        Start 196: MOL2File_test
196/293 Test #196: MOL2File_test ................................   Passed    0.01 sec
        Start 197: NMRStarFile_test
197/293 Test #197: NMRStarFile_test .............................   Passed    0.33 sec
        Start 198: DCDFile_test
198/293 Test #198: DCDFile_test .................................   Passed    0.04 sec
        Start 199: PDBRecords_test
199/293 Test #199: PDBRecords_test ..............................   Passed    0.01 sec
        Start 200: PDBInfo_test
200/293 Test #200: PDBInfo_test .................................   Passed    0.01 sec
        Start 201: PDBFile_test
201/293 Test #201: PDBFile_test .................................   Passed    0.11 sec
        Start 202: TrajectoryFile_test
202/293 Test #202: TrajectoryFile_test ..........................   Passed    0.01 sec
        Start 203: XYZFile_test
203/293 Test #203: XYZFile_test .................................   Passed    0.02 sec
        Start 204: SCWRLRotamerFile_test
204/293 Test #204: SCWRLRotamerFile_test ........................   Passed   13.73 sec
        Start 205: AtomicContactEnergy_test
205/293 Test #205: AtomicContactEnergy_test .....................   Passed    0.03 sec
        Start 206: ComposedEnergyProcessor_test
206/293 Test #206: ComposedEnergyProcessor_test .................   Passed    0.01 sec
        Start 207: EnergyProcessor_test
207/293 Test #207: EnergyProcessor_test .........................   Passed    0.01 sec
        Start 208: OoiEnergy_test
208/293 Test #208: OoiEnergy_test ...............................   Passed    0.15 sec
        Start 209: AddHydrogenProcessor_test
209/293 Test #209: AddHydrogenProcessor_test ....................   Passed    0.04 sec
        Start 210: AnalyticalSES_test
210/293 Test #210: AnalyticalSES_test ...........................   Passed    0.02 sec
        Start 211: AssignBondOrderProcessor_test1
211/293 Test #211: AssignBondOrderProcessor_test1 ...............   Passed    4.23 sec
        Start 212: AssignBondOrderProcessor_test2
212/293 Test #212: AssignBondOrderProcessor_test2 ...............   Passed    4.10 sec
        Start 213: AtomBijection_test
213/293 Test #213: AtomBijection_test ...........................   Passed    0.01 sec
        Start 214: BinaryFingerprintMethods_test
214/293 Test #214: BinaryFingerprintMethods_test ................***Failed    0.35 sec
Version: 1.5.0
checking parseFingerprintBitstring()... passed
checking parseFingerprintFeatureList()... passed
checking BinaryFingerprintMethods()... passed
checking ~BinaryFingerprintMethods()... passed
checking BinaryFingerprintMethods(Options)... passed
checking BinaryFingerprintMethods(Options, LibraryFeatures)... passed
checking BinaryFingerprintMethods(Options, LibraryFeatures, QueryFeatures)... passed
checking BinaryFingerprintMethods(const BinaryFingerprintMethods& bfm)... passed
checking Assignment... passed
checking cutoffSearch()... 
    (line 380 TEST_EQUAL(results_subset.size(), 0): got 8, expected 0)  - 
    (line 380 TEST_EQUAL(results_subset.size(), 0): got 1, expected 0)  - 
    (line 380 TEST_EQUAL(results_subset.size(), 0): got 1, expected 0)  - 
    FAILED
checking connectedComponents(store_nns=true)... passed
checking connectedComponents(store_nns=false)... passed
checking calculateSelectionMedoid()... passed
checking averageLinkageClustering( RNN_PARALLEL )... passed
checking averageLinkageClustering( RNN_SWITCHED )... passed
FAILED

        Start 215: BindingPocketProcessor_test
215/293 Test #215: BindingPocketProcessor_test ..................   Passed    1.20 sec
        Start 216: ConnectedComponentsProcessor_test
216/293 Test #216: ConnectedComponentsProcessor_test ............   Passed    0.01 sec
        Start 217: DisulfidBondProcessor_test
217/293 Test #217: DisulfidBondProcessor_test ...................   Passed    0.02 sec
        Start 218: Enumerator_test
218/293 Test #218: Enumerator_test ..............................   Passed    0.22 sec
        Start 219: EnumeratorIndex_test
219/293 Test #219: EnumeratorIndex_test .........................   Passed    0.01 sec
        Start 220: GeometricProperties_test
220/293 Test #220: GeometricProperties_test .....................   Passed    0.01 sec
        Start 221: SimpleMolecularGraph_test
221/293 Test #221: SimpleMolecularGraph_test ....................   Passed    0.01 sec
        Start 222: NumericalSAS_test
222/293 Test #222: NumericalSAS_test ............................   Passed    0.01 sec
        Start 223: PeptideBuilder_test
223/293 Test #223: PeptideBuilder_test ..........................   Passed    0.04 sec
        Start 224: PeptideCapProcessor_test
224/293 Test #224: PeptideCapProcessor_test .....................   Passed    0.15 sec
        Start 225: Peptides_test
225/293 Test #225: Peptides_test ................................   Passed    0.02 sec
        Start 226: RadialDistributionFunction_test
226/293 Test #226: RadialDistributionFunction_test ..............   Passed    0.01 sec
        Start 227: RDFIntegrator_test
227/293 Test #227: RDFIntegrator_test ...........................   Passed    0.01 sec
        Start 228: RDFParameter_test
228/293 Test #228: RDFParameter_test ............................   Passed    0.01 sec
        Start 229: RDFSection_test
229/293 Test #229: RDFSection_test ..............................   Passed    0.01 sec
        Start 230: ReconstructFragmentProcessor_test
230/293 Test #230: ReconstructFragmentProcessor_test ............   Passed    0.04 sec
        Start 231: ResidueChecker_test
231/293 Test #231: ResidueChecker_test ..........................   Passed    0.01 sec
        Start 232: RMSDMinimizer_test
232/293 Test #232: RMSDMinimizer_test ...........................   Passed    0.01 sec
        Start 233: SideChainPlacementProcessor_test
233/293 Test #233: SideChainPlacementProcessor_test .............   Passed    0.01 sec
        Start 234: SmilesParser_test
234/293 Test #234: SmilesParser_test ............................   Passed    0.01 sec
        Start 235: SmartsParser_test
235/293 Test #235: SmartsParser_test ............................   Passed    0.01 sec
        Start 236: SmartsMatcher_test
236/293 Test #236: SmartsMatcher_test ...........................   Passed    0.04 sec
        Start 237: StructureMapper_test
237/293 Test #237: StructureMapper_test .........................   Passed    0.02 sec
        Start 238: TransformationProcessor_test
238/293 Test #238: TransformationProcessor_test .................   Passed    0.01 sec
        Start 239: TranslationProcessor_test
239/293 Test #239: TranslationProcessor_test ....................   Passed    0.01 sec
        Start 240: SurfaceProcessor_test
240/293 Test #240: SurfaceProcessor_test ........................   Passed    0.02 sec
        Start 241: SecondaryStructureProcessor_test
241/293 Test #241: SecondaryStructureProcessor_test .............   Passed    0.01 sec
        Start 242: UCK_test
242/293 Test #242: UCK_test .....................................   Passed    0.01 sec
        Start 243: BuildBondsProcessor_test
243/293 Test #243: BuildBondsProcessor_test .....................   Passed    0.04 sec
        Start 244: SDGenerator_test
244/293 Test #244: SDGenerator_test .............................   Passed    0.01 sec
        Start 245: RingAnalyser_test
245/293 Test #245: RingAnalyser_test ............................   Passed    0.01 sec
        Start 246: ResidueRotamerSet_test
246/293 Test #246: ResidueRotamerSet_test .......................   Passed    0.04 sec
        Start 247: RotamerLibrary_test
247/293 Test #247: RotamerLibrary_test ..........................   Passed    8.53 sec
        Start 248: PoissonBoltzmann_test
248/293 Test #248: PoissonBoltzmann_test ........................   Passed    0.28 sec
        Start 249: SolventDescriptor_test
249/293 Test #249: SolventDescriptor_test .......................   Passed    0.01 sec
        Start 250: SolventParameter_test
250/293 Test #250: SolventParameter_test ........................   Passed    0.05 sec
        Start 251: ClaverieParameter_test
251/293 Test #251: ClaverieParameter_test .......................   Passed    0.02 sec
        Start 252: ReissCavFreeEnergyProcessor_test
252/293 Test #252: ReissCavFreeEnergyProcessor_test .............   Passed    0.01 sec
        Start 253: UhligCavFreeEnergyProcessor_test
253/293 Test #253: UhligCavFreeEnergyProcessor_test .............   Passed    0.01 sec
        Start 254: PCMCavFreeEnergyProcessor_test
254/293 Test #254: PCMCavFreeEnergyProcessor_test ...............   Passed    0.02 sec
        Start 255: PierottiCavFreeEnergyProcessor_test
255/293 Test #255: PierottiCavFreeEnergyProcessor_test ..........   Passed    0.01 sec
        Start 256: Pair6_12RDFIntegrator_test
256/293 Test #256: Pair6_12RDFIntegrator_test ...................   Passed    0.01 sec
        Start 257: Pair6_12InteractionEnergyProcessor_test
257/293 Test #257: Pair6_12InteractionEnergyProcessor_test ......   Passed    0.06 sec
        Start 258: PairExpInteractionEnergyProcessor_test
258/293 Test #258: PairExpInteractionEnergyProcessor_test .......   Passed    0.01 sec
        Start 259: PairExpRDFIntegrator_test
259/293 Test #259: PairExpRDFIntegrator_test ....................   Passed    0.01 sec
        Start 260: PARSE_test
260/293 Test #260: PARSE_test ...................................   Passed    0.07 sec
        Start 261: AromaticityProcessor_test
261/293 Test #261: AromaticityProcessor_test ....................   Passed    0.02 sec
        Start 262: ConnectivityBase_test
262/293 Test #262: ConnectivityBase_test ........................   Passed    0.02 sec
        Start 263: ConnectivityDescriptors_test
263/293 Test #263: ConnectivityDescriptors_test .................   Passed    0.02 sec
        Start 264: Descriptor_test
264/293 Test #264: Descriptor_test ..............................   Passed    0.01 sec
        Start 265: Descriptors_test
265/293 Test #265: Descriptors_test .............................   Passed    0.02 sec
        Start 266: PartialChargeProcessor_test
266/293 Test #266: PartialChargeProcessor_test ..................   Passed    0.01 sec
        Start 267: PartialChargeBase_test
267/293 Test #267: PartialChargeBase_test .......................   Passed    0.01 sec
        Start 268: PartialChargeDescriptors_test
268/293 Test #268: PartialChargeDescriptors_test ................   Passed    0.01 sec
        Start 269: RingPerceptionProcessor_test
269/293 Test #269: RingPerceptionProcessor_test .................   Passed    0.02 sec
        Start 270: SimpleBase_test
270/293 Test #270: SimpleBase_test ..............................   Passed    0.02 sec
        Start 271: SimpleDescriptors_test
271/293 Test #271: SimpleDescriptors_test .......................   Passed    0.02 sec
        Start 272: SurfaceBase_test
272/293 Test #272: SurfaceBase_test .............................   Passed    0.04 sec
        Start 273: SurfaceDescriptors_test
273/293 Test #273: SurfaceDescriptors_test ......................   Passed    0.04 sec
        Start 274: NBModel_test
274/293 Test #274: NBModel_test .................................   Passed    0.01 sec
        Start 275: ALLModel_test
275/293 Test #275: ALLModel_test ................................   Passed    0.01 sec
        Start 276: FeatureSelection_test
276/293 Test #276: FeatureSelection_test ........................   Passed    0.88 sec
        Start 277: GPModel_test
277/293 Test #277: GPModel_test .................................   Passed    0.01 sec
        Start 278: KNNModel_test
278/293 Test #278: KNNModel_test ................................   Passed    0.01 sec
        Start 279: KPCRModel_test
279/293 Test #279: KPCRModel_test ...............................   Passed    0.01 sec
        Start 280: KPLSModel_test
280/293 Test #280: KPLSModel_test ...............................   Passed    0.01 sec
        Start 281: LDAModel_test
281/293 Test #281: LDAModel_test ................................   Passed    0.01 sec
        Start 282: MLRModel_test
282/293 Test #282: MLRModel_test ................................   Passed    0.01 sec
        Start 283: PCRModel_test
283/293 Test #283: PCRModel_test ................................   Passed    0.01 sec
        Start 284: PLSModel_test
284/293 Test #284: PLSModel_test ................................   Passed    0.01 sec
        Start 285: RRModel_test
285/293 Test #285: RRModel_test .................................   Passed    0.01 sec
        Start 286: SNBModel_test
286/293 Test #286: SNBModel_test ................................   Passed    0.01 sec
        Start 287: XDRPersistenceManager_test
287/293 Test #287: XDRPersistenceManager_test ...................   Passed    0.03 sec
        Start 288: BallAndStickModel_test
288/293 Test #288: BallAndStickModel_test .......................   Passed    0.20 sec
        Start 289: AddCartoonModel_test
289/293 Test #289: AddCartoonModel_test .........................   Passed    0.16 sec
        Start 290: LabelModel_test
290/293 Test #290: LabelModel_test ..............................   Passed    0.11 sec
        Start 291: LineModel_test
291/293 Test #291: LineModel_test ...............................   Passed    0.11 sec
        Start 292: SurfaceModel_test
292/293 Test #292: SurfaceModel_test ............................   Passed    0.36 sec
        Start 293: HBondModel_test
293/293 Test #293: HBondModel_test ..............................   Passed    0.11 sec

99% tests passed, 2 tests failed out of 293

Total Test time (real) =  98.60 sec

The following tests FAILED:
	 25 - Function_test (Failed)
	214 - BinaryFingerprintMethods_test (Failed)
Errors while running CTest
make[2]: *** [Makefile:118: test] Error 8
make[2]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
dh_auto_test: error: cd build && make -j1 test ARGS\+=-j1 returned exit code 2
make[1]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c'
   create-stamp debian/debhelper-build-stamp
 fakeroot debian/rules binary
dh binary --buildsystem=cmake --builddirectory=build --with python3
   dh_testroot -O--buildsystem=cmake -O--builddirectory=build
   dh_prep -O--buildsystem=cmake -O--builddirectory=build
	rm -f -- debian/libball1.5-data.substvars debian/libball1.5.substvars debian/libball1.5-dev.substvars debian/libballview1.5.substvars debian/libballview1.5-dev.substvars debian/python3-ball.substvars debian/ballview.substvars debian/libball1.5-doc.substvars
	rm -fr -- debian/.debhelper/generated/libball1.5-data/ debian/libball1.5-data/ debian/tmp/ debian/.debhelper/generated/libball1.5/ debian/libball1.5/ debian/.debhelper/generated/libball1.5-dev/ debian/libball1.5-dev/ debian/.debhelper/generated/libballview1.5/ debian/libballview1.5/ debian/.debhelper/generated/libballview1.5-dev/ debian/libballview1.5-dev/ debian/.debhelper/generated/python3-ball/ debian/python3-ball/ debian/.debhelper/generated/ballview/ debian/ballview/ debian/.debhelper/generated/libball1.5-doc/ debian/libball1.5-doc/
   dh_installdirs -O--buildsystem=cmake -O--builddirectory=build
	install -d debian/libball1.5-dev/usr/include/BALL debian/libball1.5-dev/usr/lib/cmake/BALL
	install -d debian/ballview/usr/bin debian/ballview/usr/share/man/man1 debian/ballview/usr/share/doc/ballview/html debian/ballview/usr/share/applications debian/ballview/usr/share/pixmaps
   debian/rules override_dh_auto_install-arch
make[1]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c'
mkdir -p debian/libball1.5/usr/lib \
	debian/libball1.5-data/usr/share/BALL-1.5 \
	debian/libballview1.5/usr/lib \
	debian/python3-ball/usr/share/BALL-1.5 \
	debian/python3-ball/usr//lib/python3/dist-packages \
                debian/ballview/usr/lib/ballview/
mkdir -p debian/ballview/usr/share/BALL-1.5/data/graphics
cp -r build/usr/share/BALL/BALLView/*	debian/ballview/usr/share/doc/ballview/
cp    build/usr/bin/BALLView		debian/ballview/usr/lib/ballview/
cp -a debian/bin/*					debian/ballview/usr/bin
find build/usr/lib/ -name libBALL*.so.* | xargs -r cp --target-directory debian/libball1.5/usr/lib/
find build/usr/lib/ -name libVIEW*.so.* | xargs -r cp --target-directory debian/libballview1.5/usr/lib/
# debian needs the logo in the ballview - package, not in the libball
cp build/usr/share/BALL/graphics/ballview*.xpm debian/ballview/usr/share/pixmaps/
cp -r build/usr/share/doc/BALL/EXAMPLES/PYTHON	debian/python3-ball/usr/share/BALL-1.5
cp -a source/PYTHON/EXTENSIONS/*       debian/python3-ball/usr//lib/python3/dist-packages
# -dev packages are arch dependent
mkdir -p debian/libball1.5-dev/usr/lib \
	debian/libballview1.5-dev/usr/include/BALL \
	debian/libballview1.5-dev/usr/lib \
	debian/libball1.5-dev/usr/include
# move the cmake configuration files to their final location
cp -R build/usr/lib/cmake/ debian/libball1.5-dev/usr/lib
cp -r build/usr/include/BALL       debian/libball1.5-dev/usr/include
cp -r build/usr/include/BALL/VIEW  debian/libballview1.5-dev/usr/include/BALL
# get rid of the VIEW includes in libball-dev
rm -rf debian/libball1.5-dev/usr/include/BALL/VIEW
# eliminating chrpath settings
chmod 755 debian/ballview/usr/lib/ballview/BALLView
chrpath -d debian/ballview/usr/lib/ballview/BALLView
find debian -name "*.so" | xargs -r chrpath -d
make[1]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c'
   debian/rules override_dh_auto_install-indep
make[1]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c'
mkdir -p debian/libball1.5-doc/usr/share/doc/libball1.5/html \
	debian/libball1.5-data/usr/share/BALL-1.5/doc \
	debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL
cp    build/usr/share/doc/BALL/TUTORIAL/tutorial.pdf	debian/libball1.5-doc/usr/share/doc/libball1.5/
# we need the BALLView documentation in the data path as well... sorry for that
cp -r build/usr/share/doc/BALL/EXAMPLES/PYTHON/BALLView	debian/libball1.5-data/usr/share/BALL-1.5/doc
cp -r build/usr/share/doc/BALL/html/*			debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL
cp -r build/usr/share/BALL/*    debian/libball1.5-data/usr/share/BALL-1.5
make[1]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c'
   debian/rules override_dh_install
make[1]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c'
dh_install
	install -d debian/.debhelper/generated/libball1.5-data
	install -d debian/.debhelper/generated/libball1.5
	install -d debian/.debhelper/generated/libball1.5-dev
	install -d debian/.debhelper/generated/libballview1.5
	install -d debian/.debhelper/generated/libballview1.5-dev
	install -d debian/.debhelper/generated/python3-ball
	cp --reflink=auto -a ./debian/ballview.desktop debian/ballview/usr/share/applications/
	install -d debian/.debhelper/generated/ballview
	install -d debian/.debhelper/generated/libball1.5-doc
dh_sip3
	(grep -a -s -v sip3:Depends debian/libball1.5-data.substvars; echo sip3:Depends=sip-py3api-12.7) > debian/libball1.5-data.substvars.new
	mv debian/libball1.5-data.substvars.new debian/libball1.5-data.substvars
	(grep -a -s -v sip3:Depends debian/libball1.5.substvars; echo sip3:Depends=sip-py3api-12.7) > debian/libball1.5.substvars.new
	mv debian/libball1.5.substvars.new debian/libball1.5.substvars
	(grep -a -s -v sip3:Depends debian/libball1.5-dev.substvars; echo sip3:Depends=sip-py3api-12.7) > debian/libball1.5-dev.substvars.new
	mv debian/libball1.5-dev.substvars.new debian/libball1.5-dev.substvars
	(grep -a -s -v sip3:Depends debian/libballview1.5.substvars; echo sip3:Depends=sip-py3api-12.7) > debian/libballview1.5.substvars.new
	mv debian/libballview1.5.substvars.new debian/libballview1.5.substvars
	(grep -a -s -v sip3:Depends debian/libballview1.5-dev.substvars; echo sip3:Depends=sip-py3api-12.7) > debian/libballview1.5-dev.substvars.new
	mv debian/libballview1.5-dev.substvars.new debian/libballview1.5-dev.substvars
	(grep -a -s -v sip3:Depends debian/python3-ball.substvars; echo sip3:Depends=sip-py3api-12.7) > debian/python3-ball.substvars.new
	mv debian/python3-ball.substvars.new debian/python3-ball.substvars
	(grep -a -s -v sip3:Depends debian/ballview.substvars; echo sip3:Depends=sip-py3api-12.7) > debian/ballview.substvars.new
	mv debian/ballview.substvars.new debian/ballview.substvars
	(grep -a -s -v sip3:Depends debian/libball1.5-doc.substvars; echo sip3:Depends=sip-py3api-12.7) > debian/libball1.5-doc.substvars.new
	mv debian/libball1.5-doc.substvars.new debian/libball1.5-doc.substvars
if [ -d debian/python3-ball ] ; then \
    find debian/python3-ball/usr/lib/python*/dist-packages/ -name BALLPyMacros.h -delete ; \
    find debian/python3-ball -name CMakeLists.txt -delete ; \
fi
make[1]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c'
	rm -f debian/ballview.debhelper.log debian/libball1.5-data.debhelper.log debian/libball1.5-dev.debhelper.log debian/libball1.5-doc.debhelper.log debian/libball1.5.debhelper.log debian/libballview1.5-dev.debhelper.log debian/libballview1.5.debhelper.log debian/python3-ball.debhelper.log
   debian/rules override_dh_installdocs
make[1]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c'
dh_installdocs
	install -d debian/libball1.5-data/usr/share/doc/libball1.5-data
	install -p -m0644 debian/README.Debian debian/libball1.5-data/usr/share/doc/libball1.5-data/README.Debian
	install -p -m0644 debian/copyright debian/libball1.5-data/usr/share/doc/libball1.5-data/copyright
	install -d debian/libball1.5/usr/share/doc/libball1.5
	install -p -m0644 debian/copyright debian/libball1.5/usr/share/doc/libball1.5/copyright
	install -d debian/libball1.5-dev/usr/share/doc/libball1.5-dev
	install -p -m0644 debian/copyright debian/libball1.5-dev/usr/share/doc/libball1.5-dev/copyright
	install -d debian/libballview1.5/usr/share/doc/libballview1.5
	install -p -m0644 debian/copyright debian/libballview1.5/usr/share/doc/libballview1.5/copyright
	install -d debian/libballview1.5-dev/usr/share/doc/libballview1.5-dev
	install -p -m0644 debian/copyright debian/libballview1.5-dev/usr/share/doc/libballview1.5-dev/copyright
	install -d debian/python3-ball/usr/share/doc/python3-ball
	install -p -m0644 debian/copyright debian/python3-ball/usr/share/doc/python3-ball/copyright
	install -p -m0644 debian/copyright debian/ballview/usr/share/doc/ballview/copyright
	install -d debian/ballview/usr/share/doc-base/
	install -p -m0644 debian/ballview.doc-base debian/ballview/usr/share/doc-base/ballview
	install -d debian/libball1.5-doc/usr/share/doc/libball1.5-doc
	install -p -m0644 debian/copyright debian/libball1.5-doc/usr/share/doc/libball1.5-doc/copyright
	install -d debian/libball1.5-doc/usr/share/doc-base/
	install -p -m0644 debian/libball1.5-doc.doc-base.manual debian/libball1.5-doc/usr/share/doc-base/ball-manual
	install -p -m0644 debian/libball1.5-doc.doc-base.tutorial debian/libball1.5-doc/usr/share/doc-base/ball-tutorial
find debian/*/usr/share -type d -empty -delete
find debian/*/usr/share -name jquery.js -delete
find debian/*/usr/share -name license.txt -delete
make[1]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c'
   dh_installchangelogs -O--buildsystem=cmake -O--builddirectory=build
	install -p -m0644 debian/changelog debian/libball1.5/usr/share/doc/libball1.5/changelog.Debian
	install -p -m0644 ./ChangeLog debian/libball1.5/usr/share/doc/libball1.5/changelog
	install -p -m0644 debian/changelog debian/libball1.5-data/usr/share/doc/libball1.5-data/changelog.Debian
	install -p -m0644 ./ChangeLog debian/libball1.5-data/usr/share/doc/libball1.5-data/changelog
	install -p -m0644 debian/changelog debian/libballview1.5/usr/share/doc/libballview1.5/changelog.Debian
	install -p -m0644 ./ChangeLog debian/libballview1.5/usr/share/doc/libballview1.5/changelog
	install -p -m0644 debian/changelog debian/libball1.5-doc/usr/share/doc/libball1.5-doc/changelog.Debian
	install -p -m0644 ./ChangeLog debian/libball1.5-doc/usr/share/doc/libball1.5-doc/changelog
	install -p -m0644 debian/changelog debian/libballview1.5-dev/usr/share/doc/libballview1.5-dev/changelog.Debian
	install -p -m0644 ./ChangeLog debian/libballview1.5-dev/usr/share/doc/libballview1.5-dev/changelog
	install -p -m0644 debian/changelog debian/libball1.5-dev/usr/share/doc/libball1.5-dev/changelog.Debian
	install -p -m0644 ./ChangeLog debian/libball1.5-dev/usr/share/doc/libball1.5-dev/changelog
	install -p -m0644 debian/changelog debian/ballview/usr/share/doc/ballview/changelog.Debian
	install -p -m0644 ./ChangeLog debian/ballview/usr/share/doc/ballview/changelog
	install -p -m0644 debian/changelog debian/python3-ball/usr/share/doc/python3-ball/changelog.Debian
	install -p -m0644 ./ChangeLog debian/python3-ball/usr/share/doc/python3-ball/changelog
   dh_installman -O--buildsystem=cmake -O--builddirectory=build
	install -d debian/ballview/usr/share/man/man1/
	install -p -m0644 ./debian/ballview.1 debian/ballview/usr/share/man/man1/ballview.1
	man-recode --to-code UTF-8 --suffix .dh-new debian/ballview/usr/share/man/man1/ballview.1
	mv debian/ballview/usr/share/man/man1/ballview.1.dh-new debian/ballview/usr/share/man/man1/ballview.1
	chmod 0644 -- debian/ballview/usr/share/man/man1/ballview.1
   dh_python3 -O--buildsystem=cmake -O--builddirectory=build
D: dh_python3 dh_python3:161: version: 4.20201102+nmu1
D: dh_python3 dh_python3:162: argv: ['/usr/bin/dh_python3', '-O--buildsystem=cmake', '-O--builddirectory=build']
D: dh_python3 dh_python3:163: options: {'guess_deps': True, 'skip_private': False, 'verbose': False, 'arch': None, 'package': None, 'no_package': None, 'compile_all': False, 'vrange': None, 'regexpr': None, 'accept_upstream_versions': False, 'depends': None, 'depends_section': None, 'recommends': None, 'recommends_section': None, 'suggests': None, 'suggests_section': None, 'requires': None, 'shebang': None, 'ignore_shebangs': False, 'clean_dbg_pkg': True, 'no_ext_rename': False, 'no_shebang_rewrite': False, 'O': '--builddirectory=build'}
D: dh_python3 dh_python3:164: args: []
D: dh_python3 dh_python3:165: supported Python versions: 3.9 (default=3.9)
D: dh_python3 debhelper:99: skipping package libball1.5-data (missing ${python3:Depends} in Depends)
D: dh_python3 debhelper:99: skipping package libball1.5 (missing ${python3:Depends} in Depends)
D: dh_python3 debhelper:99: skipping package libball1.5-dev (missing ${python3:Depends} in Depends)
D: dh_python3 debhelper:99: skipping package libballview1.5 (missing ${python3:Depends} in Depends)
D: dh_python3 debhelper:99: skipping package libballview1.5-dev (missing ${python3:Depends} in Depends)
D: dh_python3 debhelper:99: skipping package ballview (missing ${python3:Depends} in Depends)
D: dh_python3 debhelper:99: skipping package libball1.5-doc (missing ${python3:Depends} in Depends)
D: dh_python3 debhelper:152: source=ball, binary packages=['python3-ball']
D: dh_python3 dh_python3:183: processing package python3-ball...
D: dh_python3 fs:260: package python3-ball details = {'requires.txt': set(), 'egg-info': set(), 'nsp.txt': set(), 'shebangs': set(), 'public_vers': {Version('3')}, 'private_dirs': {}, 'compile': True, 'ext_vers': set(), 'ext_no_version': set()}
D: dh_python3 depends:117: generating dependencies for package python3-ball
D: dh_python3 depends:275: D={'python3:any'}; R=[]; S=[]; E=[], B=[]; RT=[]
   dh_installinit -O--buildsystem=cmake -O--builddirectory=build
   dh_installsystemduser -O--buildsystem=cmake -O--builddirectory=build
   dh_lintian -O--buildsystem=cmake -O--builddirectory=build
	install -d debian/libballview1.5/usr/share/lintian/overrides
	install -p -m0644 debian/libballview1.5.lintian-overrides debian/libballview1.5/usr/share/lintian/overrides/libballview1.5
	install -d debian/libballview1.5-dev/usr/share/lintian/overrides
	install -p -m0644 debian/libballview1.5-dev.lintian-overrides debian/libballview1.5-dev/usr/share/lintian/overrides/libballview1.5-dev
	install -d debian/ballview/usr/share/lintian/overrides
	install -p -m0644 debian/ballview.lintian-overrides debian/ballview/usr/share/lintian/overrides/ballview
	install -d debian/libball1.5-doc/usr/share/lintian/overrides
	install -p -m0644 debian/libball1.5-doc.lintian-overrides debian/libball1.5-doc/usr/share/lintian/overrides/libball1.5-doc
   dh_perl -O--buildsystem=cmake -O--builddirectory=build
   dh_link -O--buildsystem=cmake -O--builddirectory=build
	rm -f debian/ballview/usr/share/man/man1/BALLView.1.gz
	ln -s ballview.1.gz debian/ballview/usr/share/man/man1/BALLView.1.gz
	rm -f debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/jquery.js
	ln -s ../../../../javascript/jquery/jquery.js debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/jquery.js
   dh_strip_nondeterminism -O--buildsystem=cmake -O--builddirectory=build
	Using 1583750703 as canonical time
	Normalizing debian/libball1.5-data/usr/share/BALL-1.5/graphics/icons/22x22/categories/preferences-display.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-data/usr/share/BALL-1.5/graphics/icons/16x16/actions/select-rectangular.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-data/usr/share/BALL-1.5/graphics/icons/16x16/actions/list-add.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-data/usr/share/BALL-1.5/graphics/icons/16x16/actions/view-restore.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-data/usr/share/BALL-1.5/graphics/icons/16x16/actions/download-pubchem.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-data/usr/share/BALL-1.5/graphics/icons/22x22/actions/download-pubchem.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-data/usr/share/BALL-1.5/graphics/icons/22x22/actions/screenshot.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-data/usr/share/BALL-1.5/graphics/icons/22x22/actions/mode-edit.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-data/usr/share/BALL-1.5/graphics/icons/22x22/actions/continuous-loop.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-data/usr/share/BALL-1.5/graphics/icons/22x22/actions/download-pdb.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-data/usr/share/BALL-1.5/graphics/icons/16x16/actions/transform-rotate.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-data/usr/share/BALL-1.5/graphics/icons/16x16/actions/transform-move.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-data/usr/share/BALL-1.5/graphics/icons/16x16/actions/measure.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-data/usr/share/BALL-1.5/graphics/icons/16x16/categories/preferences.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-data/usr/share/BALL-1.5/graphics/icons/16x16/categories/preferences-display.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-data/usr/share/BALL-1.5/graphics/icons/16x16/actions/view-fullscreen.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-data/usr/share/BALL-1.5/graphics/icons/16x16/actions/document-save.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-data/usr/share/BALL-1.5/graphics/icons/16x16/actions/molecule-set-element.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-data/usr/share/BALL-1.5/graphics/icons/16x16/actions/object-focus.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-data/usr/share/BALL-1.5/graphics/icons/16x16/actions/download-electrondensity.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-data/usr/share/BALL-1.5/graphics/icons/16x16/actions/process-stop.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-data/usr/share/BALL-1.5/graphics/icons/16x16/actions/quickopen-file.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-data/usr/share/BALL-1.5/graphics/icons/16x16/actions/help-hint.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-data/usr/share/BALL-1.5/graphics/icons/16x16/actions/edit-delete.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-data/usr/share/BALL-1.5/graphics/icons/16x16/actions/edit-copy.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-data/usr/share/BALL-1.5/graphics/icons/22x22/actions/view-fullscreen.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-data/usr/share/BALL-1.5/graphics/icons/22x22/actions/document-save.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-data/usr/share/BALL-1.5/graphics/icons/22x22/actions/molecule-set-element.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-data/usr/share/BALL-1.5/graphics/icons/22x22/actions/object-focus.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-data/usr/share/BALL-1.5/graphics/icons/22x22/actions/download-electrondensity.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-data/usr/share/BALL-1.5/graphics/icons/22x22/actions/transform-rotate.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-data/usr/share/BALL-1.5/graphics/icons/22x22/actions/molecule-minimize.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-data/usr/share/BALL-1.5/graphics/icons/22x22/actions/transform-move.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-data/usr/share/BALL-1.5/graphics/icons/22x22/actions/measure.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-data/usr/share/BALL-1.5/graphics/icons/22x22/categories/preferences.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-data/usr/share/BALL-1.5/graphics/icons/16x16/actions/screenshot.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-data/usr/share/BALL-1.5/graphics/icons/16x16/actions/mode-edit.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-data/usr/share/BALL-1.5/graphics/icons/16x16/actions/download-pdb.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-data/usr/share/BALL-1.5/graphics/icons/16x16/actions/quicksave.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-data/usr/share/BALL-1.5/graphics/icons/16x16/actions/document-open.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-data/usr/share/BALL-1.5/graphics/cursor.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-data/usr/share/BALL-1.5/graphics/logo.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-data/usr/share/BALL-1.5/graphics/icons/22x22/actions/select-rectangular.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-data/usr/share/BALL-1.5/graphics/icons/22x22/actions/list-add.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-data/usr/share/BALL-1.5/graphics/icons/22x22/actions/view-restore.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-data/usr/share/BALL-1.5/graphics/icons/22x22/actions/molecule-add-hydrogens.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-data/usr/share/BALL-1.5/graphics/icons/22x22/actions/molecule-assign-bond-orders.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-data/usr/share/BALL-1.5/graphics/icons/22x22/actions/help-hint.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-data/usr/share/BALL-1.5/graphics/icons/22x22/actions/edit-delete.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-data/usr/share/BALL-1.5/graphics/icons/22x22/actions/edit-copy.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-data/usr/share/BALL-1.5/graphics/icons/22x22/actions/quicksave.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-data/usr/share/BALL-1.5/graphics/icons/22x22/actions/document-open.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-data/usr/share/BALL-1.5/graphics/icons/22x22/actions/create-bond.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-data/usr/share/BALL-1.5/graphics/icons/22x22/actions/process-stop.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-data/usr/share/BALL-1.5/graphics/icons/22x22/actions/quickopen-file.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-data/usr/share/BALL-1.5/graphics/icons/16x16/mimetype/text-x-povray.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-data/usr/share/BALL-1.5/PresentaBALL/images/lactose.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-data/usr/share/BALL-1.5/PresentaBALL/images/structure-asparagine.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-data/usr/share/BALL-1.5/PresentaBALL/images/structure-efavirenz.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-data/usr/share/BALL-1.5/PresentaBALL/images/1glu2_scaled.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-data/usr/share/BALL-1.5/PresentaBALL/images/ehec.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-data/usr/share/BALL-1.5/PresentaBALL/images/structure-docetaxel.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-data/usr/share/BALL-1.5/PresentaBALL/images/sas.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-data/usr/share/BALL-1.5/PresentaBALL/images/structure-salicylicacid.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-data/usr/share/BALL-1.5/PresentaBALL/images/structure-imatinib.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-data/usr/share/BALL-1.5/PresentaBALL/images/logo-uds.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-data/usr/share/BALL-1.5/PresentaBALL/images/structure-lysine.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-data/usr/share/BALL-1.5/PresentaBALL/images/3eml_scaled.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-data/usr/share/BALL-1.5/PresentaBALL/images/hiv-lifecycle-scaled.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-data/usr/share/BALL-1.5/PresentaBALL/images/structure-acetylsalicylicacid.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-data/usr/share/BALL-1.5/PresentaBALL/images/structure-salicin.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-data/usr/share/BALL-1.5/PresentaBALL/images/cell-division.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-data/usr/share/BALL-1.5/PresentaBALL/images/cool_scaled.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-data/usr/share/BALL-1.5/PresentaBALL/images/Lactose_spaltung.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-data/usr/share/BALL-1.5/PresentaBALL/images/drug-development-pipeline.png using File::StripNondeterminism::handlers::png
	Using 1583750703 as canonical time
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/dd/d9c/a06398.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/dd/dc6/a04462.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/dd/d3c/a04466.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/dd/d69/a07650.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/dd/dd9/a05802.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/dd/df0/a05262.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/da/d42/a07610.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/da/d48/a04414.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/da/dfc/a08314.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/da/d9e/a04926.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/da/d90/a07974.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/da/d25/a07110.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/da/d81/a05850.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/da/db7/a06494.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/da/dde/a07566.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/da/d8a/a08570.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/da/da3/a08394.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/da/d1a/a06726.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/da/d1a/a07302.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/da/ddf/a19483.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/da/d89/a06366.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/da/d2d/a08302.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/da/d85/a03758.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/da/dd3/a03198.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/da/d10/a05470.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/da/d64/a05666.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/da/d8d/a03158.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/da/df4/a05050.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/da/d5b/a03322.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/da/d63/a08158.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/da/dbf/a19758.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/da/d6e/a03314.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/da/d41/a05550.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/da/de7/a07890.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/da/dc0/a07542.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/da/dc8/a07950.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/da/dc8/a06290.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/da/d19/a03094.png using File::StripNondeterminism::handlers::png
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	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/db/dee/a03338.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/db/d24/a08098.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/db/da5/a19606.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/db/dc7/a06818.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/db/de2/a04650.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/db/d62/a05358.png using File::StripNondeterminism::handlers::png
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	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/db/d8a/a07290.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/db/d4e/a07742.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/db/d56/a08042.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/db/da6/a06050.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/db/da6/a04782.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/db/d59/a06346.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/db/d7b/a07638.png usin	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/db/d60/a07450.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/db/d64/a07722.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/db/d64/a04082.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/db/dcc/a07138.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/db/d63/a05686.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/db/d20/a05034.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/db/def/a07678.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/db/d2a/a03850.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/db/d11/a07938.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/db/d7d/a03386.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/db/d12/a07510.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/db/dbc/a03114.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/db/de7/a08366.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/db/d66/a07010.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/db/d2b/a05454.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/db/d35/a05030.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/db/dc8/a05314.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/db/d9c/a05894.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/db/d52/a06806.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/db/dd1/a05730.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/db/d14/a08330.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/db/d70/a06410.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/db/dff/a08390.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/db/df6/a05082.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/db/d6b/a07386.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/db/d03/a06618.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/db/dd7/a05302.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/db/d40/a08190.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/db/d4a/a07098.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/db/df3/a08182.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/db/d7f/a03150.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/db/dbd/a07546.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/d0/d0f/a07170.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/d0/d06/a08474.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/d0/ddb/a06430.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/d0/dbe/a06026.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/d0/dee/a04014.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/d0/dec/a06822.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/d0/d1f/a19491.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/d0/de9/a03530.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/d0/dad/a04630.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/d0/d92/a07918.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/d0/db7/a05562.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/d0/db7/a07866.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/d0/d8a/a07922.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/d0/dc4/a08318.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/d0/da6/a06022.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/d0/d89/a08006.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/d0/db8/a07990.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/d0/d22/a06722.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/d0/d22/a05526.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/d0/d22/a03142.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/d0/dd3/a07870.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/d0/dd3/a07574.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/d0/d0b/a03910.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/d0/d0b/a08254.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/d0/d60/a03878.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/d0/d51/a04710.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/d0/d36/a07986.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/d0/d64/a06166.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/d0/d44/a06302.png usin	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/d0/db2/a03822.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/d0/d7a/a08030.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/d0/d6a/a06014.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/d0/d2b/a03394.png using File::StripNondeterminism::handlers::png
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	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/d2/dd7/a07914.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/d2/df3/a03890.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/d2/d7f/a19782.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/d2/d7f/a08514.png using File::StripNondeterminism::handlers::png
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	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/d8/d4f/a07370.png using File::StripNondeterminism::handlers::png
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	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/d8/d56/a07846.png usin	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/d8/d59/a05062.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/d8/db8/a07930.png using File::StripNondeterminism::handlers::png
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	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/d8/dea/a08462.png using File::StripNondeterminism::handlers::png
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	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/d8/d11/a19570.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/d8/d71/a07830.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/d8/d12/a04694.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/d8/de7/a05250.png using File::StripNondeterminism::handlers::png
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	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/d8/de1/a07954.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/d8/d6c/a07850.png using File::StripNondeterminism::handlers::png
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	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/d7/df9/a19786.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/d7/db7/a05762.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/d7/dde/a05662.png using File::StripNondeterminism::handlers::png
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	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/d7/de6/a05902.png using File::StripNondeterminism::handlers::png
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	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/d7/d7c/a07526.png using File::StripNondeterminism::handlers::png
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	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/d7/dfe/a06874.png using File::StripNondeterminism::handlers::png
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	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/d7/d55/a05750.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/d7/dc5/a06850.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/d7/d82/a03774.png using File::StripNondeterminism::handlers::png
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	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/d7/d3c/a06854.png using File::StripNondeterminism::handlers::png
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	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/d7/d2e/a04482.png usin	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/d7/dac/a08278.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/d7/d86/a05890.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/d7/d6f/a05826.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/d7/d6f/a05910.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/d7/d69/a05862.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/d7/d3f/a05754.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/d7/df8/a07658.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/d3/ddd/a05594.png using File::StripNondeterminism::handlers::png
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	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/d3/d4f/a06898.png using File::StripNondeterminism::handlers::png
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	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/d3/d1a/a04798.png using File::StripNondeterminism::handlers::png
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	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/d3/d56/a08018.png using File::StripNondeterminism::handlers::png
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	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/d3/d29/a08426.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/d3/d27/a05574.png using File::StripNondeterminism::handlers::png
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	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/d3/d43/a07798.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/d3/d74/a04418.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/d3/d64/a04974.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/d3/d8d/a07878.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/d3/d7c/a05706.png using File::StripNondeterminism::handlers::png
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	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/d4/de5/a04986.png using File::StripNondeterminism::handlers::png
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	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/d4/df3/a03066.png usin	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/d1/d8c/a06226.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/d1/ddb/a05106.png using File::StripNondeterminism::handlers::png
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	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/d1/d05/a08434.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/d1/d15/a07522.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/d1/d5f/a03706.png using File::StripNondeterminism::handlers::png
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	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/d1/d86/a04746.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/d1/d9f/a05714.png using File::StripNondeterminism::handlers::png
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	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/df/df1/a07118.png usin	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/d5/df4/a08258.png using File::StripNondeterminism::handlers::png
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	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/d5/d4d/a07654.png using File::StripNondeterminism::handlers::png
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	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/dd/db0/a07402.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/dd/d9e/a05838.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/dd/d9e/a05378.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/dd/d24/a19662.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/dd/d8f/a08406.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/dd/dde/a06982.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/dd/d02/a06686.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/dd/da3/a06634.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/dd/da3/a08458.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/dd/ddf/a08334.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/dd/d22/a04662.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/dd/d5d/a05998.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/dd/da2/a08210.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/dd/d10/a04434.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/dd/d60/a04878.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/dd/d51/a03842.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/dd/d94/a03882.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/dd/db3/a07946.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/dd/d3e/a05806.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/dd/d5b/a04562.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/dd/d7a/a03306.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/dd/def/a07702.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/dd/d6e/a03226.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/dd/da0/a04006.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/dd/d71/a03182.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/dd/d7d/a08262.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/dd/d4b/a08270.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/dd/d6a/a04642.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/dd/d73/a07766.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/dd/d73/a07506.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/dd/d82/a05598.png usin	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/df/dd2/a04486.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/df/d53/a06418.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/df/d4e/a08118.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/df/d7b/a08550.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/df/db9/a03078.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/df/d29/a08478.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/df/d0b/a03610.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/df/d60/a08038.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/df/d51/a08282.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/df/d26/a05290.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/df/d43/a19806.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/df/d64/a03110.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/df/db3/a07782.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/df/d75/a04010.png using File::StripNondeterminism::handlers::png
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	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/df/dfb/a03946.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/df/dd9/a04702.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/df/d7f/a07682.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/df/d7f/a07354.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/df/d7f/a03366.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/df/d5e/a04982.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/df/de3/a05942.png using File::StripNondeterminism::handlers::png
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	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/d5/d8e/a04874.png using File::StripNondeterminism::handlers::png
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	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/d5/d2f/a07094.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/d5/d2f/a03222.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/d5/dc1/a07838.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/d5/dfc/a05210.png using File::StripNondeterminism::handlers::png
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	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/d5/d6d/a07438.png usin	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/form_47.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/form_102.png using File::StripNondeterminism::handlers::png
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	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/form_12.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/tab_a.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/form_4.png using File::StripNondeterminism::handlers::png
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	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/open.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/form_77.png using File::StripNondeterminism::handlers::png
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	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/form_53.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/form_58.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/form_25.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/form_30.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/form_72.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/form_81.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/bdwn.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/sync_off.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/form_20.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/form_1.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/nav_h.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/form_2.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/form_3.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/form_18.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/doc.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/form_57.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/form_37.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/form_95.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/form_71.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/tab_s.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/form_82.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/bc_s.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/form_48.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/form_92.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/nav_g.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/form_7.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/form_84.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/form_38.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/form_55.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/form_67.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/form_43.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/form_13.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/form_32.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/form_90.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/form_46.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/form_54.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/form_96.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/form_68.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/form_33.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/form_64.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/form_93.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/form_26.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/form_79.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/form_73.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/form_97.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/splitbar.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/form_45.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/form_62.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/form_98.png using 	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/form_42.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/form_27.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/sync_on.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/form_80.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/form_49.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/form_40.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/form_19.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/form_83.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/form_28.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/form_78.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/form_76.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/form_6.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/folderclosed.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/form_39.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/form_70.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/form_15.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/folderopen.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/form_24.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/form_34.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/form_9.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/form_60.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/form_36.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/form_44.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/tab_b.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/form_94.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/form_23.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/form_88.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/form_10.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/form_29.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/form_35.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/form_59.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/form_16.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/form_8.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/form_91.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/nav_f.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/form_41.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/form_101.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/form_61.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/form_50.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/form_0.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/form_63.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/form_75.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/form_86.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/closed.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/form_99.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/form_51.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/form_87.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/form_89.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/tab_h.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/form_56.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/form_103.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/KERNEL.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/form_31.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/form_17.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/form_14.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/form_69.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/form_21.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/form_74.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/de/d0e/a07910.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/de/d8c/a06114.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/de/d96/a03054.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/de/dec/a05914.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/de/dec/a07758.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usFile::StripNondeterminism::handlers::png
g File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/db/d3a/a05986.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/db/da2/a04526.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/db/dd3/a06070.png using File::StripNondeterminism::handlers::png
g File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/d9/d9c/a06342.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/d9/d93/a06246.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/d9/d03/a06866.png using File::StripNondeterminism::handlers::png
g File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/d0/d7c/a03318.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/d0/dae/a07994.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/d0/dc2/a08070.png using File::StripNondeterminism::handlers::png
r/share/doc/libball1.5/html/BALL/de/d1f/a05994.png using File::StripNondeterminism::handlers::png
g File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/d8/d56/a03982.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/d8/d89/a06054.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/d8/d59/a06394.png using File::StripNondeterminism::handlers::png
g File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/d6/d60/a08410.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/d6/d43/a07122.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/d6/d8d/a03266.png using File::StripNondeterminism::handlers::png
g File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/d7/d2e/a03310.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/d7/d40/a07714.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/d7/d40/a08146.png using File::StripNondeterminism::handlers::png
g File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/d3/d49/a07738.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/d3/d4a/a08566.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/d3/dd8/a19666.png using File::StripNondeterminism::handlers::png
g File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/df/d24/a03358.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/df/dc7/a08450.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/df/de2/a03410.png using File::StripNondeterminism::handlers::png
g File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/dc/da9/a07982.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/dc/d61/a03950.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/dc/d9e/a06654.png using File::StripNondeterminism::handlers::png
g File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/dd/d66/a05534.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/dd/dc8/a03342.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/dd/d9c/a05530.png using File::StripNondeterminism::handlers::png
g File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/d5/d43/a08350.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/d5/d43/a05406.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/d5/d43/a05870.png using File::StripNondeterminism::handlers::png
g File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/search/search_m.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/search/search_l.png using File::StripNondeterminism::handlers::png
	Normalizing debian/libball1.5-doc/usr/share/doc/libball1.5/html/BALL/search/search_r.png using File::StripNondeterminism::handlers::png
   dh_compress -O--buildsystem=cmake -O--builddirectory=build
	cd debian/libball1.5-data
	cd debian/libball1.5
	cd debian/libball1.5-dev
	cd debian/libballview1.5
	cd debian/libballview1.5-dev
	cd debian/python3-ball
	cd debian/ballview
	cd debian/libball1.5-doc
	chmod a-x usr/share/doc/libball1.5-data/changelog usr/share/doc/libball1.5-data/changelog.Debian
	chmod a-x usr/share/doc/libball1.5/changelog usr/share/doc/libball1.5/changelog.Debian
	chmod a-x usr/share/doc/libball1.5-dev/changelog usr/share/doc/libball1.5-dev/changelog.Debian
	gzip -9nf usr/share/doc/libball1.5-data/changelog usr/share/doc/libball1.5-data/changelog.Debian
	gzip -9nf usr/share/doc/libball1.5/changelog usr/share/doc/libball1.5/changelog.Debian
	gzip -9nf usr/share/doc/libball1.5-dev/changelog usr/share/doc/libball1.5-dev/changelog.Debian
	chmod a-x usr/share/doc/libballview1.5-dev/changelog usr/share/doc/libballview1.5-dev/changelog.Debian
	chmod a-x usr/share/doc/python3-ball/changelog usr/share/doc/python3-ball/changelog.Debian
	chmod a-x usr/share/doc/libballview1.5/changelog usr/share/doc/libballview1.5/changelog.Debian
	gzip -9nf usr/share/doc/libballview1.5-dev/changelog usr/share/doc/libballview1.5-dev/changelog.Debian
	gzip -9nf usr/share/doc/python3-ball/changelog usr/share/doc/python3-ball/changelog.Debian
	gzip -9nf usr/share/doc/libballview1.5/changelog usr/share/doc/libballview1.5/changelog.Debian
	cd '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c'
	cd '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c'
	cd '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c'
	cd '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c'
	cd '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c'
	cd '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c'
	chmod a-x usr/share/doc/ballview/changelog usr/share/doc/ballview/changelog.Debian usr/share/doc/ballview/translations/BALLView-de_DE.ts usr/share/doc/ballview/translations/BALLView-zh_TW.ts usr/share/man/man1/ballview.1
	gzip -9nf usr/share/doc/ballview/changelog usr/share/doc/ballview/changelog.Debian usr/share/doc/ballview/translations/BALLView-de_DE.ts usr/share/doc/ballview/translations/BALLView-zh_TW.ts usr/share/man/man1/ballview.1
	cd '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c'
	chmod a-x usr/share/doc/libball1.5-doc/changelog usr/share/doc/libball1.5-doc/changelog.Debian usr/share/doc/libball1.5/html/BALL/formula.repository usr/share/doc/libball1.5/tutorial.pdf
	gzip -9nf usr/share/doc/libball1.5-doc/changelog usr/share/doc/libball1.5-doc/changelog.Debian usr/share/doc/libball1.5/html/BALL/formula.repository usr/share/doc/libball1.5/tutorial.pdf
	cd '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c'
   dh_fixperms -O--buildsystem=cmake -O--builddirectory=build
	find debian/libball1.5-data -true -print0 2>/dev/null | xargs -0r chown --no-dereference 0:0
	find debian/libball1.5 -true -print0 2>/dev/null | xargs -0r chown --no-dereference 0:0
	find debian/libball1.5-dev -true -print0 2>/dev/null | xargs -0r chown --no-dereference 0:0
	find debian/libballview1.5 -true -print0 2>/dev/null | xargs -0r chown --no-dereference 0:0
	find debian/libballview1.5-dev -true -print0 2>/dev/null | xargs -0r chown --no-dereference 0:0
	find debian/ballview -true -print0 2>/dev/null | xargs -0r chown --no-dereference 0:0
	find debian/python3-ball -true -print0 2>/dev/null | xargs -0r chown --no-dereference 0:0
	find debian/libball1.5-doc -true -print0 2>/dev/null | xargs -0r chown --no-dereference 0:0
	find debian/libball1.5 ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s
	find debian/libballview1.5 ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s
	find debian/libball1.5/usr/share/doc -type f -a -true -a ! -regex 'debian/libball1.5/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644
	find debian/libballview1.5/usr/share/doc -type f -a -true -a ! -regex 'debian/libballview1.5/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644
	find debian/ballview ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s
	find debian/libball1.5/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755
	find debian/libballview1.5/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755
	find debian/libball1.5 -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644
	find debian/libballview1.5/usr/share/lintian/overrides -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644
	find debian/libball1.5/usr/lib -type f -name '*.ali' -a -true -a -true -print0 2>/dev/null | xargs -0r chmod uga-w
	find debian/libballview1.5 -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644
	find debian/ballview/usr/share/doc -type f -a -true -a ! -regex 'debian/ballview/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644
	find debian/libballview1.5/usr/lib -type f -name '*.ali' -a -true -a -true -print0 2>/dev/null | xargs -0r chmod uga-w
	find debian/libballview1.5-dev ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s
	find debian/python3-ball ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s
	find debian/ballview/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755
	find debian/ballview/usr/share/man debian/ballview/usr/share/applications debian/ballview/usr/share/lintian/overrides -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644
	find debian/ballview -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644
	find debian/ballview/usr/bin -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod a+x
	find debian/libballview1.5-dev/usr/share/doc -type f -a -true -a ! -regex 'debian/libballview1.5-dev/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644
	find debian/ballview/usr/lib -type f -name '*.ali' -a -true -a -true -print0 2>/dev/null | xargs -0r chmod uga-w
	find debian/libballview1.5-dev/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755
	find debian/libballview1.5-dev/usr/include debian/libballview1.5-dev/usr/share/lintian/overrides -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644
	find debian/python3-ball/usr/share/doc -type f -a -true -a ! -regex 'debian/python3-ball/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644
	find debian/libball1.5-dev ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s
	find debian/libball1.5-data ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s
	find debian/python3-ball/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755
	find debian/python3-ball -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644
	find debian/python3-ball/usr/lib -type f -name '*.ali' -a -true -a -true -print0 2>/dev/null | xargs -0r chmod uga-w
	find debian/libballview1.5-dev -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644
	find debian/libballview1.5-dev/usr/lib -type f -name '*.ali' -a -true -a -true -print0 2>/dev/null | xargs -0r chmod uga-w
	find debian/libball1.5-dev/usr/share/doc -type f -a -true -a ! -regex 'debian/libball1.5-dev/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644
	find debian/libball1.5-data/usr/share/doc -type f -a -true -a ! -regex 'debian/libball1.5-data/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644
	find debian/libball1.5-dev/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755
	find debian/libball1.5-data/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755
	find debian/libball1.5-dev/usr/include -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644
	find debian/libball1.5-data -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644
	find debian/libball1.5-dev -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644
	find debian/libball1.5-dev/usr/lib -type f -name '*.ali' -a -true -a -true -print0 2>/dev/null | xargs -0r chmod uga-w
	find debian/libball1.5-doc ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s
	find debian/libball1.5-doc/usr/share/doc -type f -a -true -a ! -regex 'debian/libball1.5-doc/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644
	find debian/libball1.5-doc/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755
	find debian/libball1.5-doc/usr/share/lintian/overrides -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644
	find debian/libball1.5-doc -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644
   dh_missing -O--buildsystem=cmake -O--builddirectory=build
   dh_dwz -O--buildsystem=cmake -O--builddirectory=build
	dwz -- debian/libball1.5/usr/lib/libBALL.so.1.5
	dwz -- debian/libballview1.5/usr/lib/libVIEW.so.1.5
	dwz -- debian/ballview/usr/lib/ballview/BALLView
   dh_strip -O--buildsystem=cmake -O--builddirectory=build
	install -d debian/.debhelper/libballview1.5/dbgsym-root/usr/lib/debug/.build-id/3e
	objcopy --only-keep-debug --compress-debug-sections debian/libballview1.5/usr/lib/libVIEW.so.1.5 debian/.debhelper/libballview1.5/dbgsym-root/usr/lib/debug/.build-id/3e/4f957b0af532543cd243743c090c9ee5cefb59.debug
	install -d debian/.debhelper/libball1.5/dbgsym-root/usr/lib/debug/.build-id/40
	objcopy --only-keep-debug --compress-debug-sections debian/libball1.5/usr/lib/libBALL.so.1.5 debian/.debhelper/libball1.5/dbgsym-root/usr/lib/debug/.build-id/40/40089f81eca9c88065538d455a92709b46b254.debug
	install -d debian/.debhelper/ballview/dbgsym-root/usr/lib/debug/.build-id/64
	objcopy --only-keep-debug --compress-debug-sections debian/ballview/usr/lib/ballview/BALLView debian/.debhelper/ballview/dbgsym-root/usr/lib/debug/.build-id/64/02048e0eba657bd64959cff87e7ef9380b7c89.debug
	chmod 0644 -- debian/.debhelper/ballview/dbgsym-root/usr/lib/debug/.build-id/64/02048e0eba657bd64959cff87e7ef9380b7c89.debug
	chown 0:0 -- debian/.debhelper/ballview/dbgsym-root/usr/lib/debug/.build-id/64/02048e0eba657bd64959cff87e7ef9380b7c89.debug
	strip --remove-section=.comment --remove-section=.note debian/ballview/usr/lib/ballview/BALLView
	objcopy --add-gnu-debuglink debian/.debhelper/ballview/dbgsym-root/usr/lib/debug/.build-id/64/02048e0eba657bd64959cff87e7ef9380b7c89.debug debian/ballview/usr/lib/ballview/BALLView
	install -d debian/.debhelper/ballview/dbgsym-root/usr/share/doc
	ln -s ballview debian/.debhelper/ballview/dbgsym-root/usr/share/doc/ballview-dbgsym
	chmod 0644 -- debian/.debhelper/libballview1.5/dbgsym-root/usr/lib/debug/.build-id/3e/4f957b0af532543cd243743c090c9ee5cefb59.debug
	chown 0:0 -- debian/.debhelper/libballview1.5/dbgsym-root/usr/lib/debug/.build-id/3e/4f957b0af532543cd243743c090c9ee5cefb59.debug
	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/libballview1.5/usr/lib/libVIEW.so.1.5
	objcopy --add-gnu-debuglink debian/.debhelper/libballview1.5/dbgsym-root/usr/lib/debug/.build-id/3e/4f957b0af532543cd243743c090c9ee5cefb59.debug debian/libballview1.5/usr/lib/libVIEW.so.1.5
	install -d debian/.debhelper/libballview1.5/dbgsym-root/usr/share/doc
	ln -s libballview1.5 debian/.debhelper/libballview1.5/dbgsym-root/usr/share/doc/libballview1.5-dbgsym
	chmod 0644 -- debian/.debhelper/libball1.5/dbgsym-root/usr/lib/debug/.build-id/40/40089f81eca9c88065538d455a92709b46b254.debug
	chown 0:0 -- debian/.debhelper/libball1.5/dbgsym-root/usr/lib/debug/.build-id/40/40089f81eca9c88065538d455a92709b46b254.debug
	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/libball1.5/usr/lib/libBALL.so.1.5
	objcopy --add-gnu-debuglink debian/.debhelper/libball1.5/dbgsym-root/usr/lib/debug/.build-id/40/40089f81eca9c88065538d455a92709b46b254.debug debian/libball1.5/usr/lib/libBALL.so.1.5
	install -d debian/.debhelper/libball1.5/dbgsym-root/usr/share/doc
	ln -s libball1.5 debian/.debhelper/libball1.5/dbgsym-root/usr/share/doc/libball1.5-dbgsym
   dh_makeshlibs -O--buildsystem=cmake -O--builddirectory=build
	rm -f debian/libball1.5-data/DEBIAN/shlibs
	rm -f debian/libball1.5/DEBIAN/shlibs
	install -d debian/libball1.5/DEBIAN
	echo "libBALL 1.5 libball1.5 (>= 1.5.0+git20180813.37fc53c)" >> debian/libball1.5/DEBIAN/shlibs
	chmod 0644 -- debian/libball1.5/DEBIAN/shlibs
	chown 0:0 -- debian/libball1.5/DEBIAN/shlibs
	mv debian/.debhelper/generated/libball1.5/triggers.new debian/.debhelper/generated/libball1.5/triggers
	rm -f debian/libball1.5-dev/DEBIAN/shlibs
	rm -f debian/libballview1.5/DEBIAN/shlibs
	install -d debian/libballview1.5/DEBIAN
	echo "libVIEW 1.5 libballview1.5 (>= 1.5.0+git20180813.37fc53c)" >> debian/libballview1.5/DEBIAN/shlibs
	chmod 0644 -- debian/libballview1.5/DEBIAN/shlibs
	chown 0:0 -- debian/libballview1.5/DEBIAN/shlibs
	mv debian/.debhelper/generated/libballview1.5/triggers.new debian/.debhelper/generated/libballview1.5/triggers
	rm -f debian/libballview1.5-dev/DEBIAN/shlibs
	rm -f debian/python3-ball/DEBIAN/shlibs
	rm -f debian/ballview/DEBIAN/shlibs
	rm -f debian/libball1.5-doc/DEBIAN/shlibs
   dh_shlibdeps -O--buildsystem=cmake -O--builddirectory=build
	dpkg-shlibdeps -Tdebian/libball1.5.substvars debian/libball1.5/usr/lib/libBALL.so.1.5
	dpkg-shlibdeps -Tdebian/libballview1.5.substvars debian/libballview1.5/usr/lib/libVIEW.so.1.5
	install -d debian/ballview/DEBIAN
	dpkg-shlibdeps -Tdebian/ballview.substvars debian/ballview/usr/lib/ballview/BALLView
dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/ballview/usr/lib/ballview/BALLView was not linked against libGLEW.so.2.1 (it uses none of the library's symbols)
dpkg-shlibdeps: warning: symbol __glewBufferDataARB used by debian/libballview1.5/usr/lib/libVIEW.so.1.5 found in none of the libraries
dpkg-shlibdeps: warning: symbol __glewBindBufferARB used by debian/libballview1.5/usr/lib/libVIEW.so.1.5 found in none of the libraries
dpkg-shlibdeps: warning: symbol __glewDeleteBuffersARB used by debian/libballview1.5/usr/lib/libVIEW.so.1.5 found in none of the libraries
dpkg-shlibdeps: warning: symbol glewInit used by debian/libballview1.5/usr/lib/libVIEW.so.1.5 found in none of the libraries
dpkg-shlibdeps: warning: symbol __glewGenBuffersARB used by debian/libballview1.5/usr/lib/libVIEW.so.1.5 found in none of the libraries
dpkg-shlibdeps: warning: symbol __glewTexImage3D used by debian/libballview1.5/usr/lib/libVIEW.so.1.5 found in none of the libraries
   dh_installdeb -O--buildsystem=cmake -O--builddirectory=build
	install -d debian/libball1.5-data/DEBIAN
	install -p -m0644 debian/.debhelper/generated/libball1.5/triggers debian/libball1.5/DEBIAN/triggers
	install -d debian/libball1.5-dev/DEBIAN
	install -p -m0644 debian/.debhelper/generated/libballview1.5/triggers debian/libballview1.5/DEBIAN/triggers
	install -d debian/libballview1.5-dev/DEBIAN
	install -d debian/python3-ball/DEBIAN
	printf '#!/bin/sh\nset -e\n' > debian/python3-ball/DEBIAN/postinst
	cat debian/python3-ball.postinst.debhelper >> debian/python3-ball/DEBIAN/postinst
	chmod 0755 -- debian/python3-ball/DEBIAN/postinst
	chown 0:0 -- debian/python3-ball/DEBIAN/postinst
	printf '#!/bin/sh\nset -e\n' > debian/python3-ball/DEBIAN/prerm
	cat debian/python3-ball.prerm.debhelper >> debian/python3-ball/DEBIAN/prerm
	chmod 0755 -- debian/python3-ball/DEBIAN/prerm
	chown 0:0 -- debian/python3-ball/DEBIAN/prerm
	install -d debian/libball1.5-doc/DEBIAN
   dh_gencontrol -O--buildsystem=cmake -O--builddirectory=build
	echo misc:Depends= >> debian/libball1.5-data.substvars
	echo misc:Pre-Depends= >> debian/libball1.5-data.substvars
	dpkg-gencontrol -plibball1.5-data -ldebian/changelog -Tdebian/libball1.5-data.substvars -Pdebian/libball1.5-data
	echo misc:Depends= >> debian/libball1.5-dev.substvars
	echo misc:Pre-Depends= >> debian/libball1.5-dev.substvars
	dpkg-gencontrol -plibball1.5-dev -ldebian/changelog -Tdebian/libball1.5-dev.substvars -Pdebian/libball1.5-dev
	echo misc:Depends= >> debian/libballview1.5-dev.substvars
	echo misc:Pre-Depends= >> debian/libballview1.5-dev.substvars
	dpkg-gencontrol -plibballview1.5-dev -ldebian/changelog -Tdebian/libballview1.5-dev.substvars -Pdebian/libballview1.5-dev
	echo misc:Depends= >> debian/python3-ball.substvars
	echo misc:Pre-Depends= >> debian/python3-ball.substvars
	dpkg-gencontrol -ppython3-ball -ldebian/changelog -Tdebian/python3-ball.substvars -Pdebian/python3-ball
	echo misc:Depends= >> debian/libball1.5-doc.substvars
	echo misc:Pre-Depends= >> debian/libball1.5-doc.substvars
	dpkg-gencontrol -plibball1.5-doc -ldebian/changelog -Tdebian/libball1.5-doc.substvars -Pdebian/libball1.5-doc
	echo misc:Depends= >> debian/libball1.5.substvars
	echo misc:Pre-Depends= >> debian/libball1.5.substvars
	install -d debian/.debhelper/libball1.5/dbgsym-root/DEBIAN
	dpkg-gencontrol -plibball1.5 -ldebian/changelog -Tdebian/libball1.5.substvars -Pdebian/.debhelper/libball1.5/dbgsym-root -UPre-Depends -URecommends -USuggests -UEnhances -UProvides -UEssential -UConflicts -DPriority=optional -UHomepage -UImportant -UBuilt-Using -DAuto-Built-Package=debug-symbols -UProtected -DPackage=libball1.5-dbgsym "-DDepends=libball1.5 (= \${binary:Version})" "-DDescription=debug symbols for libball1.5" -DBuild-Ids=4040089f81eca9c88065538d455a92709b46b254 -DSection=debug -UMulti-Arch -UReplaces -UBreaks
	echo misc:Depends= >> debian/libballview1.5.substvars
	echo misc:Pre-Depends= >> debian/libballview1.5.substvars
	install -d debian/.debhelper/libballview1.5/dbgsym-root/DEBIAN
	dpkg-gencontrol -plibballview1.5 -ldebian/changelog -Tdebian/libballview1.5.substvars -Pdebian/.debhelper/libballview1.5/dbgsym-root -UPre-Depends -URecommends -USuggests -UEnhances -UProvides -UEssential -UConflicts -DPriority=optional -UHomepage -UImportant -UBuilt-Using -DAuto-Built-Package=debug-symbols -UProtected -DPackage=libballview1.5-dbgsym "-DDepends=libballview1.5 (= \${binary:Version})" "-DDescription=debug symbols for libballview1.5" -DBuild-Ids=3e4f957b0af532543cd243743c090c9ee5cefb59 -DSection=debug -UMulti-Arch -UReplaces -UBreaks
	echo misc:Depends= >> debian/ballview.substvars
	echo misc:Pre-Depends= >> debian/ballview.substvars
	install -d debian/.debhelper/ballview/dbgsym-root/DEBIAN
	dpkg-gencontrol -pballview -ldebian/changelog -Tdebian/ballview.substvars -Pdebian/.debhelper/ballview/dbgsym-root -UPre-Depends -URecommends -USuggests -UEnhances -UProvides -UEssential -UConflicts -DPriority=optional -UHomepage -UImportant -UBuilt-Using -DAuto-Built-Package=debug-symbols -UProtected -DPackage=ballview-dbgsym "-DDepends=ballview (= \${binary:Version})" "-DDescription=debug symbols for ballview" -DBuild-Ids=6402048e0eba657bd64959cff87e7ef9380b7c89 -DSection=debug -UMulti-Arch -UReplaces -UBreaks
dpkg-gencontrol: warning: Depends field of package python3-ball: substitution variable ${shlibs:Depends} used, but is not defined
dpkg-gencontrol: warning: Depends field of package python3-ball: substitution variable ${sip:Depends} used, but is not defined
dpkg-gencontrol: warning: package libball1.5: substitution variable ${sip3:Depends} unused, but is defined
dpkg-gencontrol: warning: package libballview1.5: substitution variable ${sip3:Depends} unused, but is defined
	chmod 0644 -- debian/.debhelper/libball1.5/dbgsym-root/DEBIAN/control
	chown 0:0 -- debian/.debhelper/libball1.5/dbgsym-root/DEBIAN/control
	dpkg-gencontrol -plibball1.5 -ldebian/changelog -Tdebian/libball1.5.substvars -Pdebian/libball1.5
	chmod 0644 -- debian/.debhelper/libballview1.5/dbgsym-root/DEBIAN/control
	chown 0:0 -- debian/.debhelper/libballview1.5/dbgsym-root/DEBIAN/control
	dpkg-gencontrol -plibballview1.5 -ldebian/changelog -Tdebian/libballview1.5.substvars -Pdebian/libballview1.5
dpkg-gencontrol: warning: package libballview1.5-dev: substitution variable ${sip3:Depends} unused, but is defined
	chmod 0644 -- debian/libballview1.5-dev/DEBIAN/control
	chown 0:0 -- debian/libballview1.5-dev/DEBIAN/control
dpkg-gencontrol: warning: package python3-ball: substitution variable ${sip3:Depends} unused, but is defined
	chmod 0644 -- debian/python3-ball/DEBIAN/control
	chown 0:0 -- debian/python3-ball/DEBIAN/control
dpkg-gencontrol: warning: package ballview: substitution variable ${sip3:Depends} unused, but is defined
	chmod 0644 -- debian/.debhelper/ballview/dbgsym-root/DEBIAN/control
	chown 0:0 -- debian/.debhelper/ballview/dbgsym-root/DEBIAN/control
	dpkg-gencontrol -pballview -ldebian/changelog -Tdebian/ballview.substvars -Pdebian/ballview
dpkg-gencontrol: warning: package libball1.5-dev: substitution variable ${sip3:Depends} unused, but is defined
	chmod 0644 -- debian/libball1.5-dev/DEBIAN/control
	chown 0:0 -- debian/libball1.5-dev/DEBIAN/control
dpkg-gencontrol: warning: package libball1.5: substitution variable ${sip3:Depends} unused, but is defined
dpkg-gencontrol: warning: package libballview1.5: substitution variable ${sip3:Depends} unused, but is defined
	chmod 0644 -- debian/libball1.5/DEBIAN/control
	chown 0:0 -- debian/libball1.5/DEBIAN/control
dpkg-gencontrol: warning: package libball1.5-data: substitution variable ${sip3:Depends} unused, but is defined
	chmod 0644 -- debian/libballview1.5/DEBIAN/control
	chown 0:0 -- debian/libballview1.5/DEBIAN/control
	chmod 0644 -- debian/libball1.5-data/DEBIAN/control
	chown 0:0 -- debian/libball1.5-data/DEBIAN/control
dpkg-gencontrol: warning: package ballview: substitution variable ${sip3:Depends} unused, but is defined
	chmod 0644 -- debian/ballview/DEBIAN/control
	chown 0:0 -- debian/ballview/DEBIAN/control
dpkg-gencontrol: warning: package libball1.5-doc: substitution variable ${sip3:Depends} unused, but is defined
	chmod 0644 -- debian/libball1.5-doc/DEBIAN/control
	chown 0:0 -- debian/libball1.5-doc/DEBIAN/control
   dh_md5sums -O--buildsystem=cmake -O--builddirectory=build
	cd debian/libball1.5 >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums
	cd debian/libballview1.5 >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums
	cd debian/python3-ball >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums
	cd debian/ballview >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums
	cd debian/libballview1.5-dev >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums
	cd debian/libball1.5-dev >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums
	chmod 0644 -- debian/ballview/DEBIAN/md5sums
	chown 0:0 -- debian/ballview/DEBIAN/md5sums
	cd debian/libball1.5-data >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums
	chmod 0644 -- debian/python3-ball/DEBIAN/md5sums
	chown 0:0 -- debian/python3-ball/DEBIAN/md5sums
	chmod 0644 -- debian/libballview1.5/DEBIAN/md5sums
	chown 0:0 -- debian/libballview1.5/DEBIAN/md5sums
	chmod 0644 -- debian/libballview1.5-dev/DEBIAN/md5sums
	chown 0:0 -- debian/libballview1.5-dev/DEBIAN/md5sums
	cd debian/.debhelper/ballview/dbgsym-root >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums
	cd debian/.debhelper/libballview1.5/dbgsym-root >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums
	chmod 0644 -- debian/.debhelper/ballview/dbgsym-root/DEBIAN/md5sums
	chown 0:0 -- debian/.debhelper/ballview/dbgsym-root/DEBIAN/md5sums
	chmod 0644 -- debian/libball1.5/DEBIAN/md5sums
	chown 0:0 -- debian/libball1.5/DEBIAN/md5sums
	cd debian/.debhelper/libball1.5/dbgsym-root >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums
	chmod 0644 -- debian/libball1.5-dev/DEBIAN/md5sums
	chown 0:0 -- debian/libball1.5-dev/DEBIAN/md5sums
	chmod 0644 -- debian/.debhelper/libballview1.5/dbgsym-root/DEBIAN/md5sums
	chown 0:0 -- debian/.debhelper/libballview1.5/dbgsym-root/DEBIAN/md5sums
	cd debian/libball1.5-doc >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums
	chmod 0644 -- debian/.debhelper/libball1.5/dbgsym-root/DEBIAN/md5sums
	chown 0:0 -- debian/.debhelper/libball1.5/dbgsym-root/DEBIAN/md5sums
	chmod 0644 -- debian/libball1.5-data/DEBIAN/md5sums
	chown 0:0 -- debian/libball1.5-data/DEBIAN/md5sums
	chmod 0644 -- debian/libball1.5-doc/DEBIAN/md5sums
	chown 0:0 -- debian/libball1.5-doc/DEBIAN/md5sums
   dh_builddeb -O--buildsystem=cmake -O--builddirectory=build
	dpkg-deb --build debian/libball1.5-data ..
	dpkg-deb --build debian/libball1.5 ..
	dpkg-deb --build debian/.debhelper/libball1.5/dbgsym-root ..
	dpkg-deb --build debian/libball1.5-dev ..
	dpkg-deb --build debian/libballview1.5 ..
	dpkg-deb --build debian/.debhelper/libballview1.5/dbgsym-root ..
	dpkg-deb --build debian/libballview1.5-dev ..
	dpkg-deb --build debian/python3-ball ..
	dpkg-deb --build debian/ballview ..
	dpkg-deb --build debian/.debhelper/ballview/dbgsym-root ..
	dpkg-deb --build debian/libball1.5-doc ..
dpkg-deb: building package 'libball1.5-dbgsym' in '../libball1.5-dbgsym_1.5.0+git20180813.37fc53c-6_i386.deb'.
dpkg-deb: building package 'libball1.5' in '../libball1.5_1.5.0+git20180813.37fc53c-6_i386.deb'.
dpkg-deb: building package 'libball1.5-data' in '../libball1.5-data_1.5.0+git20180813.37fc53c-6_all.deb'.
dpkg-deb: building package 'libball1.5-dev' in '../libball1.5-dev_1.5.0+git20180813.37fc53c-6_i386.deb'.
dpkg-deb: building package 'libballview1.5-dbgsym' in '../libballview1.5-dbgsym_1.5.0+git20180813.37fc53c-6_i386.deb'.
dpkg-deb: building package 'libballview1.5-dev' in '../libballview1.5-dev_1.5.0+git20180813.37fc53c-6_i386.deb'.
dpkg-deb: building package 'libballview1.5' in '../libballview1.5_1.5.0+git20180813.37fc53c-6_i386.deb'.
dpkg-deb: building package 'ballview' in '../ballview_1.5.0+git20180813.37fc53c-6_i386.deb'.
dpkg-deb: building package 'ballview-dbgsym' in '../ballview-dbgsym_1.5.0+git20180813.37fc53c-6_i386.deb'.
dpkg-deb: building package 'python3-ball' in '../python3-ball_1.5.0+git20180813.37fc53c-6_i386.deb'.
dpkg-deb: building package 'libball1.5-doc' in '../libball1.5-doc_1.5.0+git20180813.37fc53c-6_all.deb'.
 dpkg-genbuildinfo --build=binary
 dpkg-genchanges --build=binary >../ball_1.5.0+git20180813.37fc53c-6_i386.changes
dpkg-genchanges: info: binary-only upload (no source code included)
 dpkg-source --after-build .
dpkg-buildpackage: info: binary-only upload (no source included)
dpkg-genchanges: info: not including original source code in upload
I: copying local configuration
I: user script /srv/workspace/pbuilder/40411/tmp/hooks/B01_cleanup starting
I: user script /srv/workspace/pbuilder/40411/tmp/hooks/B01_cleanup finished
I: unmounting dev/ptmx filesystem
I: unmounting dev/pts filesystem
I: unmounting dev/shm filesystem
I: unmounting proc filesystem
I: unmounting sys filesystem
I: cleaning the build env 
I: removing directory /srv/workspace/pbuilder/40411 and its subdirectories
I: Current time: Thu Feb 20 16:57:50 +14 2025
I: pbuilder-time-stamp: 1740020270